BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Phellodendron21_contig00006924
         (1561 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_006431585.1 hypothetical protein CICLE_v10000901mg [Citrus cl...   335   e-106
XP_006492554.1 PREDICTED: regulator of nonsense transcripts UPF3...   333   e-105
KDO41300.1 hypothetical protein CISIN_1g0102242mg, partial [Citr...   279   1e-87
XP_010657967.1 PREDICTED: regulator of nonsense transcripts UPF3...   266   2e-79
XP_015579218.1 PREDICTED: regulator of nonsense transcripts UPF3...   264   3e-78
XP_015579219.1 PREDICTED: regulator of nonsense transcripts UPF3...   263   6e-78
XP_012066696.1 PREDICTED: regulator of nonsense transcripts UPF3...   257   5e-76
XP_012066695.1 PREDICTED: regulator of nonsense transcripts UPF3...   257   6e-76
EEF35930.1 conserved hypothetical protein [Ricinus communis]          250   1e-73
OAY45039.1 hypothetical protein MANES_07G025700 [Manihot esculenta]   250   4e-73
XP_011028362.1 PREDICTED: regulator of nonsense transcripts UPF3...   249   9e-73
GAV63295.1 Smg4_UPF3 domain-containing protein [Cephalotus folli...   248   2e-72
XP_011028363.1 PREDICTED: regulator of nonsense transcripts UPF3...   245   3e-71
XP_006385051.1 hypothetical protein POPTR_0004s23450g [Populus t...   245   3e-71
XP_019079129.1 PREDICTED: regulator of nonsense transcripts UPF3...   244   6e-71
XP_019079128.1 PREDICTED: regulator of nonsense transcripts UPF3...   244   6e-71
XP_019079126.1 PREDICTED: regulator of nonsense transcripts UPF3...   244   7e-71
OAY39704.1 hypothetical protein MANES_10G116400 [Manihot esculen...   243   2e-70
XP_007041200.2 PREDICTED: regulator of nonsense transcripts UPF3...   242   3e-70
EOX97031.1 Smg-4/UPF3 family protein, putative isoform 1 [Theobr...   242   3e-70

>XP_006431585.1 hypothetical protein CICLE_v10000901mg [Citrus clementina] ESR44825.1
            hypothetical protein CICLE_v10000901mg [Citrus
            clementina]
          Length = 514

 Score =  335 bits (860), Expect = e-106
 Identities = 191/326 (58%), Positives = 204/326 (62%), Gaps = 5/326 (1%)
 Frame = +1

Query: 1    GSPXXXXXXXXXXXXXXXTTMYVLRDTAKKSSGKDKSTYILVPKRDDQGLDKPXXXXXXX 180
            GSP               TTMYVLRDTAK SSGKDKSTYILVPKRDDQ  DKP       
Sbjct: 192  GSPASGSSKRGSDKKKASTTMYVLRDTAKNSSGKDKSTYILVPKRDDQDFDKPVSSSSAT 251

Query: 181  XXXXXXXXXXXXANSDAXXXXXXXXXXXEREIXXXXXXXXXXXXXXXKNILSSPALKQNQ 360
                        ANSD            EREI               K I+SSPALKQNQ
Sbjct: 252  GSEVVLEESGVPANSDGGKKKVLLLKGKEREISQVSGSVSHQQSASVKTIISSPALKQNQ 311

Query: 361  QRESSGRIIRGILLNKDAHQSQ-----DEQQVQNSNLEKDKRPPRPPHVQLVVKDTNGVP 525
            +RE+SGRIIRGILLNKDA Q+Q      EQQ+  SNLEKDKRPPRP HVQLV+KDTNGV 
Sbjct: 312  RRENSGRIIRGILLNKDARQNQASGLHSEQQI--SNLEKDKRPPRPSHVQLVMKDTNGVS 369

Query: 526  DDKCIVKDLHSEKQEKRTRNKDRPDRGVWTLRRXXXXXXXXXXXXXXXXXXXXXXXXXXX 705
            DDK IV DLHSEKQE+RTRNKDRPDR  WTLRR                           
Sbjct: 370  DDKVIVNDLHSEKQERRTRNKDRPDRAAWTLRRSDGSYQSDESLSSSASQLSLSAVDSSE 429

Query: 706  GRLRDGKIDLSNMRSGDVKTVGSGRSSHSTLVGGSHRRIVCRGPINGVKDDGSSVISEGK 885
            G L DGK DLSNMRSG+VK VG GRSSHS++  GSHR I  RGP + VKDDGS V+SEGK
Sbjct: 430  GNLGDGKFDLSNMRSGEVKAVGGGRSSHSSVDNGSHRHIGRRGPTH-VKDDGSPVMSEGK 488

Query: 886  PLQRGSASGYGSQEKQVWVQKSSSGS 963
            PL+RG ASGYGS EKQVWVQKSSSGS
Sbjct: 489  PLRRGGASGYGSHEKQVWVQKSSSGS 514


>XP_006492554.1 PREDICTED: regulator of nonsense transcripts UPF3-like [Citrus
            sinensis]
          Length = 514

 Score =  333 bits (855), Expect = e-105
 Identities = 190/326 (58%), Positives = 203/326 (62%), Gaps = 5/326 (1%)
 Frame = +1

Query: 1    GSPXXXXXXXXXXXXXXXTTMYVLRDTAKKSSGKDKSTYILVPKRDDQGLDKPXXXXXXX 180
            GSP               TTMYVLRDTAK SSGKDKSTYILVPKRDDQ  DKP       
Sbjct: 192  GSPASGSSKRGSDKKKASTTMYVLRDTAKNSSGKDKSTYILVPKRDDQDFDKPVSSSSAT 251

Query: 181  XXXXXXXXXXXXANSDAXXXXXXXXXXXEREIXXXXXXXXXXXXXXXKNILSSPALKQNQ 360
                        ANSD            EREI               KNI+SSPALKQNQ
Sbjct: 252  GSEVVLEESGVPANSDGGKKKVLLLKGKEREISQVSGSVSHQQSASVKNIISSPALKQNQ 311

Query: 361  QRESSGRIIRGILLNKDAHQSQ-----DEQQVQNSNLEKDKRPPRPPHVQLVVKDTNGVP 525
            +RE+SGRIIRGILLNKDA Q+Q      EQQ+  SNLEKDKRPPRP HV LV+KDTNGV 
Sbjct: 312  RRENSGRIIRGILLNKDARQNQASGLHSEQQI--SNLEKDKRPPRPSHVHLVMKDTNGVS 369

Query: 526  DDKCIVKDLHSEKQEKRTRNKDRPDRGVWTLRRXXXXXXXXXXXXXXXXXXXXXXXXXXX 705
            DDK IV DLHSEKQE+RTRNKDRPDR  WTLRR                           
Sbjct: 370  DDKVIVNDLHSEKQERRTRNKDRPDRAAWTLRRSDGSYQSDESLSSSASQLSLSAVDSSE 429

Query: 706  GRLRDGKIDLSNMRSGDVKTVGSGRSSHSTLVGGSHRRIVCRGPINGVKDDGSSVISEGK 885
            G L DGK DLSNMRSG+VK VG GRSSHS++  GSHR I  RGP + VKDD S V+SEGK
Sbjct: 430  GNLGDGKFDLSNMRSGEVKAVGGGRSSHSSVDNGSHRHIGRRGPTH-VKDDSSPVMSEGK 488

Query: 886  PLQRGSASGYGSQEKQVWVQKSSSGS 963
            PL+RG ASGYGS EKQVWVQKSSSGS
Sbjct: 489  PLRRGGASGYGSHEKQVWVQKSSSGS 514


>KDO41300.1 hypothetical protein CISIN_1g0102242mg, partial [Citrus sinensis]
           KDO41301.1 hypothetical protein CISIN_1g0102242mg,
           partial [Citrus sinensis]
          Length = 253

 Score =  279 bits (713), Expect = 1e-87
 Identities = 156/254 (61%), Positives = 169/254 (66%), Gaps = 5/254 (1%)
 Frame = +1

Query: 217 ANSDAXXXXXXXXXXXEREIXXXXXXXXXXXXXXXKNILSSPALKQNQQRESSGRIIRGI 396
           ANSD            EREI               K I+SSPALKQNQ+RE+SGRIIRGI
Sbjct: 3   ANSDGGKKKVLLLKGKEREISQVSGSVSHQQSASVKTIISSPALKQNQRRENSGRIIRGI 62

Query: 397 LLNKDAHQSQ-----DEQQVQNSNLEKDKRPPRPPHVQLVVKDTNGVPDDKCIVKDLHSE 561
           LLNKDA Q+Q      EQQ+  SNLEKDKRPPRP HVQLV+KDTNGV DDK IV DLHSE
Sbjct: 63  LLNKDARQNQASGLHSEQQI--SNLEKDKRPPRPSHVQLVMKDTNGVSDDKVIVNDLHSE 120

Query: 562 KQEKRTRNKDRPDRGVWTLRRXXXXXXXXXXXXXXXXXXXXXXXXXXXGRLRDGKIDLSN 741
           KQE+RTRNKDRPDR  WTLRR                           G L DGK DLSN
Sbjct: 121 KQERRTRNKDRPDRAAWTLRRSDGSYQSDESLSSSASQLSLSAVDSSEGNLGDGKFDLSN 180

Query: 742 MRSGDVKTVGSGRSSHSTLVGGSHRRIVCRGPINGVKDDGSSVISEGKPLQRGSASGYGS 921
           MRSG+VK VG GRSSHS++  GSHR I  RGP + VKDDGS V+SEGKPL+RG ASGYGS
Sbjct: 181 MRSGEVKAVGGGRSSHSSVDNGSHRHIGRRGPTH-VKDDGSPVMSEGKPLRRGGASGYGS 239

Query: 922 QEKQVWVQKSSSGS 963
            EKQVWVQKSSSGS
Sbjct: 240 HEKQVWVQKSSSGS 253


>XP_010657967.1 PREDICTED: regulator of nonsense transcripts UPF3 isoform X4 [Vitis
            vinifera] CBI29694.3 unnamed protein product, partial
            [Vitis vinifera]
          Length = 519

 Score =  266 bits (681), Expect = 2e-79
 Identities = 165/313 (52%), Positives = 185/313 (59%), Gaps = 11/313 (3%)
 Frame = +1

Query: 55   TTMYVLRDTAKKSSGKDKSTYILVPKRDDQGL-DKPXXXXXXXXXXXXXXXXXXXANSDA 231
            TTMYVLRDTAK +S KDKST+ILVPKRDDQ L DK                       DA
Sbjct: 210  TTMYVLRDTAKSTSAKDKSTFILVPKRDDQLLSDKSVNLAAGGGAEALEEESGVSGAVDA 269

Query: 232  XXXXXXXXXXXEREIXXXXXXXXXXXXXXXKNILSSPALKQNQQRESSGRIIRGILLNKD 411
                       EREI               KNIL + A KQNQ+RE SGRIIR ILLNKD
Sbjct: 270  GKKKVLLLKGKEREISHHLLQQNVTSPV--KNILGANAPKQNQRREGSGRIIRSILLNKD 327

Query: 412  AHQSQD-----EQQVQNSNLEKDKRPPRPPHVQLVVKDTNGVPDDKCIVKDLH---SEKQ 567
            A QSQ      EQQ Q SNLEK+KRPPRPPH+QL  K+TNG  DDK +  D+H   SEKQ
Sbjct: 328  ARQSQSSMFQTEQQSQASNLEKEKRPPRPPHIQLASKETNGAQDDKVVGNDVHSFVSEKQ 387

Query: 568  EKRTRNKDRPDRGVWT-LRRXXXXXXXXXXXXXXXXXXXXXXXXXXXGRLRDGKIDLSNM 744
            +KRTRNKDRPDRGVWT LRR                           G   + + D+SN 
Sbjct: 388  DKRTRNKDRPDRGVWTPLRR--SDGSHASDESLSSSASQPTSSDFPEGSHGEMRSDMSNA 445

Query: 745  RSGDVKTVGSGRSSHSTLVGGSHRRIVCRGPINGVKD-DGSSVISEGKPLQRGSASGYGS 921
            RSG+VK +GSGR  HS L  GSH+    RGP + VKD DGSS++SEGK  +RGSA GYGS
Sbjct: 446  RSGEVKALGSGRGGHSALDNGSHKHSGRRGPTHSVKDADGSSIVSEGKHSKRGSAPGYGS 505

Query: 922  QEKQVWVQKSSSG 960
             EKQVWVQKSSSG
Sbjct: 506  HEKQVWVQKSSSG 518


>XP_015579218.1 PREDICTED: regulator of nonsense transcripts UPF3 isoform X1 [Ricinus
            communis]
          Length = 527

 Score =  264 bits (674), Expect = 3e-78
 Identities = 166/333 (49%), Positives = 191/333 (57%), Gaps = 12/333 (3%)
 Frame = +1

Query: 1    GSPXXXXXXXXXXXXXXXTTMYVLRDTAKKSSGKDKSTYILVPKRDDQGL-DKPXXXXXX 177
            GSP                TMYVLRD+AK +SGKDKSTY+LVPKRDDQ   DK       
Sbjct: 197  GSPSSSSSKRSSEKKRVSATMYVLRDSAKSTSGKDKSTYLLVPKRDDQQFSDKSTPFASA 256

Query: 178  XXXXXXXXXXXXXANSDAXXXXXXXXXXXEREIXXXXXXXXXXXXXXXKNILSSPALKQN 357
                           +D            E+EI                  ++S A+KQ+
Sbjct: 257  SGTEVLEDESGVSGITDTGKKKILLLKGKEKEISALSGGMSKQNAASFDKNVTSSAIKQS 316

Query: 358  QQRESSGRIIRGILLNKDAHQSQD-----EQQVQNSNLEKDKRPPRPPHVQLVVKDTNGV 522
            Q+RESSGRIIR ILLNKD+ Q+Q      EQQ+Q+SNLEK+KR PRP HVQLV+KD NG 
Sbjct: 317  QRRESSGRIIRSILLNKDSRQNQSSGFQSEQQIQSSNLEKEKRLPRPAHVQLVLKDVNGS 376

Query: 523  PDDKCIVKDLHS---EKQEKRTRNKDRPDRGVWT-LRRXXXXXXXXXXXXXXXXXXXXXX 690
             DDK +  DLH    EKQEKRTRNKDRPDR VWT LRR                      
Sbjct: 377  SDDKFVGNDLHGFSGEKQEKRTRNKDRPDRVVWTPLRRSDGSYASDESLSSSASQSTHTG 436

Query: 691  XXXXXGRLRDGKIDLSNMRSGDVKTVGSGRSSHSTLVGGSHRRIVCRGPINGVKD-DGSS 867
                 G L D K+D SN RSGDVKT+GSGRSSHS+L  GSH+    RGP + V+D DGSS
Sbjct: 437  QDSSQGNLGDIKVDSSNSRSGDVKTLGSGRSSHSSLDNGSHKHFGRRGPSHTVRDADGSS 496

Query: 868  VISEGKPLQRGS-ASGYGSQEKQVWVQKSSSGS 963
            +  EGKP +RG  ASGYGS EKQVWVQKSSSGS
Sbjct: 497  L--EGKPSKRGGGASGYGSHEKQVWVQKSSSGS 527


>XP_015579219.1 PREDICTED: regulator of nonsense transcripts UPF3 isoform X2 [Ricinus
            communis]
          Length = 519

 Score =  263 bits (671), Expect = 6e-78
 Identities = 169/333 (50%), Positives = 193/333 (57%), Gaps = 12/333 (3%)
 Frame = +1

Query: 1    GSPXXXXXXXXXXXXXXXTTMYVLRDTAKKSSGKDKSTYILVPKRDDQGL-DKPXXXXXX 177
            GSP                TMYVLRD+AK +SGKDKSTY+LVPKRDDQ   DK       
Sbjct: 197  GSPSSSSSKRSSEKKRVSATMYVLRDSAKSTSGKDKSTYLLVPKRDDQQFSDKSTPFASA 256

Query: 178  XXXXXXXXXXXXXANSDAXXXXXXXXXXXEREIXXXXXXXXXXXXXXXKNILSSPALKQN 357
                           +D            E+EI               KN+ SS A+KQ+
Sbjct: 257  SGTEVLEDESGVSGITDTGKKKILLLKGKEKEISANAASFD-------KNVTSS-AIKQS 308

Query: 358  QQRESSGRIIRGILLNKDAHQSQD-----EQQVQNSNLEKDKRPPRPPHVQLVVKDTNGV 522
            Q+RESSGRIIR ILLNKD+ Q+Q      EQQ+Q+SNLEK+KR PRP HVQLV+KD NG 
Sbjct: 309  QRRESSGRIIRSILLNKDSRQNQSSGFQSEQQIQSSNLEKEKRLPRPAHVQLVLKDVNGS 368

Query: 523  PDDKCIVKDLHS---EKQEKRTRNKDRPDRGVWT-LRRXXXXXXXXXXXXXXXXXXXXXX 690
             DDK +  DLH    EKQEKRTRNKDRPDR VWT LRR                      
Sbjct: 369  SDDKFVGNDLHGFSGEKQEKRTRNKDRPDRVVWTPLRRSDGSYASDESLSSSASQSTHTG 428

Query: 691  XXXXXGRLRDGKIDLSNMRSGDVKTVGSGRSSHSTLVGGSHRRIVCRGPINGVKD-DGSS 867
                 G L D K+D SN RSGDVKT+GSGRSSHS+L  GSH+    RGP + V+D DGSS
Sbjct: 429  QDSSQGNLGDIKVDSSNSRSGDVKTLGSGRSSHSSLDNGSHKHFGRRGPSHTVRDADGSS 488

Query: 868  VISEGKPLQRGS-ASGYGSQEKQVWVQKSSSGS 963
            +  EGKP +RG  ASGYGS EKQVWVQKSSSGS
Sbjct: 489  L--EGKPSKRGGGASGYGSHEKQVWVQKSSSGS 519


>XP_012066696.1 PREDICTED: regulator of nonsense transcripts UPF3-like isoform X2
            [Jatropha curcas]
          Length = 509

 Score =  257 bits (657), Expect = 5e-76
 Identities = 167/332 (50%), Positives = 193/332 (58%), Gaps = 11/332 (3%)
 Frame = +1

Query: 1    GSPXXXXXXXXXXXXXXXTTMYVLRDTAKKSSGKDKSTYILVPKRDDQGL-DKPXXXXXX 177
            GSP               TTMYVLRDTAK +SGKDKSTYILVPKRDDQ L DK       
Sbjct: 190  GSPGSSSSKRSSEKKRVSTTMYVLRDTAKSTSGKDKSTYILVPKRDDQQLSDKAVTLGTA 249

Query: 178  XXXXXXXXXXXXXANSDAXXXXXXXXXXXEREIXXXXXXXXXXXXXXXKNILSSPALKQN 357
                           +DA           E+EI               KN++SS A+KQN
Sbjct: 250  SGAEVLEDESGASGITDAGKKKILLLKGKEKEI-------SDNAASFDKNVISS-AVKQN 301

Query: 358  QQRESSGRIIRGILLNKDAHQS-----QDEQQVQNSNLEKDKRPPRPPHVQLVVKDTNGV 522
            Q+RE+SGRIIR ILLNK++ Q+     Q E Q+Q SN EK+KRPPRPPHVQLV+ +TNG 
Sbjct: 302  QRREASGRIIRSILLNKESRQNQSSGIQSEHQMQTSNSEKEKRPPRPPHVQLVL-NTNGA 360

Query: 523  PDDKCIVKDLH---SEKQEKRTRNKDRPDRGVWT-LRRXXXXXXXXXXXXXXXXXXXXXX 690
             DDK ++ DLH    EKQEKRTRNKDRPDR VWT LRR                      
Sbjct: 361  LDDKVVINDLHGFSGEKQEKRTRNKDRPDRVVWTPLRRSDGSYASDESLSLSASQSTQSG 420

Query: 691  XXXXXGRLRDGKIDLSNMRSGDVKTVGSGRSSHSTLVGGSHRRIVCRGPINGVKD-DGSS 867
                 G L D K+D SN RSG+VKT+ +GR SHS+L  GSH+    RGP + V+D DGSS
Sbjct: 421  VDSSQGNLGDLKVDPSNSRSGEVKTL-TGRGSHSSLDNGSHKHFGRRGPSHPVRDADGSS 479

Query: 868  VISEGKPLQRGSASGYGSQEKQVWVQKSSSGS 963
               EGK  +RG ASGYGS EKQVWVQKSSSGS
Sbjct: 480  --GEGKASKRGGASGYGSHEKQVWVQKSSSGS 509


>XP_012066695.1 PREDICTED: regulator of nonsense transcripts UPF3-like isoform X1
            [Jatropha curcas] KDP42459.1 hypothetical protein
            JCGZ_00256 [Jatropha curcas]
          Length = 510

 Score =  257 bits (657), Expect = 6e-76
 Identities = 167/332 (50%), Positives = 193/332 (58%), Gaps = 11/332 (3%)
 Frame = +1

Query: 1    GSPXXXXXXXXXXXXXXXTTMYVLRDTAKKSSGKDKSTYILVPKRDDQGL-DKPXXXXXX 177
            GSP               TTMYVLRDTAK +SGKDKSTYILVPKRDDQ L DK       
Sbjct: 190  GSPGSSSSKRSSEKKRVSTTMYVLRDTAKSTSGKDKSTYILVPKRDDQQLSDKAVTLGTA 249

Query: 178  XXXXXXXXXXXXXANSDAXXXXXXXXXXXEREIXXXXXXXXXXXXXXXKNILSSPALKQN 357
                           +DA           E+EI               KN++SS A+KQN
Sbjct: 250  SGAEVLEDESGASGITDAGKKKILLLKGKEKEI------SDQNAASFDKNVISS-AVKQN 302

Query: 358  QQRESSGRIIRGILLNKDAHQS-----QDEQQVQNSNLEKDKRPPRPPHVQLVVKDTNGV 522
            Q+RE+SGRIIR ILLNK++ Q+     Q E Q+Q SN EK+KRPPRPPHVQLV+ +TNG 
Sbjct: 303  QRREASGRIIRSILLNKESRQNQSSGIQSEHQMQTSNSEKEKRPPRPPHVQLVL-NTNGA 361

Query: 523  PDDKCIVKDLH---SEKQEKRTRNKDRPDRGVWT-LRRXXXXXXXXXXXXXXXXXXXXXX 690
             DDK ++ DLH    EKQEKRTRNKDRPDR VWT LRR                      
Sbjct: 362  LDDKVVINDLHGFSGEKQEKRTRNKDRPDRVVWTPLRRSDGSYASDESLSLSASQSTQSG 421

Query: 691  XXXXXGRLRDGKIDLSNMRSGDVKTVGSGRSSHSTLVGGSHRRIVCRGPINGVKD-DGSS 867
                 G L D K+D SN RSG+VKT+ +GR SHS+L  GSH+    RGP + V+D DGSS
Sbjct: 422  VDSSQGNLGDLKVDPSNSRSGEVKTL-TGRGSHSSLDNGSHKHFGRRGPSHPVRDADGSS 480

Query: 868  VISEGKPLQRGSASGYGSQEKQVWVQKSSSGS 963
               EGK  +RG ASGYGS EKQVWVQKSSSGS
Sbjct: 481  --GEGKASKRGGASGYGSHEKQVWVQKSSSGS 510


>EEF35930.1 conserved hypothetical protein [Ricinus communis]
          Length = 472

 Score =  250 bits (638), Expect = 1e-73
 Identities = 158/311 (50%), Positives = 184/311 (59%), Gaps = 11/311 (3%)
 Frame = +1

Query: 64   YVLRDTAKKSSGKDKSTYILVPKRDDQGLDKPXXXXXXXXXXXXXXXXXXXANSDAXXXX 243
            YVLRD+AK +SGKDKSTY+LVPKRDDQ                        + ++     
Sbjct: 177  YVLRDSAKSTSGKDKSTYLLVPKRDDQQFSDKSTPFASA------------SGTEVLEDE 224

Query: 244  XXXXXXXEREIXXXXXXXXXXXXXXXKNILSSPALKQNQQRESSGRIIRGILLNKDAHQS 423
                      +               KN+ SS A+KQ+Q+RESSGRIIR ILLNKD+ Q+
Sbjct: 225  SELYHLCLLIVQLSGGMSKQNAASFDKNVTSS-AIKQSQRRESSGRIIRSILLNKDSRQN 283

Query: 424  QD-----EQQVQNSNLEKDKRPPRPPHVQLVVKDTNGVPDDKCIVKDLHS---EKQEKRT 579
            Q      EQQ+Q+SNLEK+KR PRP HVQLV+KD NG  DDK +  DLH    EKQEKRT
Sbjct: 284  QSSGFQSEQQIQSSNLEKEKRLPRPAHVQLVLKDVNGSSDDKFVGNDLHGFSGEKQEKRT 343

Query: 580  RNKDRPDRGVWT-LRRXXXXXXXXXXXXXXXXXXXXXXXXXXXGRLRDGKIDLSNMRSGD 756
            RNKDRPDR VWT LRR                           G L D K+D SN RSGD
Sbjct: 344  RNKDRPDRVVWTPLRRSDGSYASDESLSSSASQSTHTGQDSSQGNLGDIKVDSSNSRSGD 403

Query: 757  VKTVGSGRSSHSTLVGGSHRRIVCRGPINGVKD-DGSSVISEGKPLQRGS-ASGYGSQEK 930
            VKT+GSGRSSHS+L  GSH+    RGP + V+D DGSS+  EGKP +RG  ASGYGS EK
Sbjct: 404  VKTLGSGRSSHSSLDNGSHKHFGRRGPSHTVRDADGSSL--EGKPSKRGGGASGYGSHEK 461

Query: 931  QVWVQKSSSGS 963
            QVWVQKSSSGS
Sbjct: 462  QVWVQKSSSGS 472


>OAY45039.1 hypothetical protein MANES_07G025700 [Manihot esculenta]
          Length = 511

 Score =  250 bits (638), Expect = 4e-73
 Identities = 164/332 (49%), Positives = 186/332 (56%), Gaps = 11/332 (3%)
 Frame = +1

Query: 1    GSPXXXXXXXXXXXXXXXTTMYVLRDTAKKSSGKDKSTYILVPKRDDQGL-DKPXXXXXX 177
            GSP               TTMYVLRD+AK +SGKDKSTYILVPKRDDQ L DK       
Sbjct: 190  GSPSSSSSKRSSDKKRVSTTMYVLRDSAKSTSGKDKSTYILVPKRDDQHLSDKVVASASA 249

Query: 178  XXXXXXXXXXXXXANSDAXXXXXXXXXXXEREIXXXXXXXXXXXXXXXKNILSSPALKQN 357
                           +DA           E+EI               KN++SS  LKQ+
Sbjct: 250  SGTEVLEDESGVSGITDAGKKKILLLKGKEKEIPTNAACFD-------KNLISS-VLKQS 301

Query: 358  QQRESSGRIIRGILLNKDAHQS-----QDEQQVQNSNLEKDKRPPRPPHVQLVVKDTNGV 522
            Q+RE+SGRIIR ILLNKD+ Q+     Q EQQ Q SNLEKDKRP RP HVQL +KD NG 
Sbjct: 302  QRREASGRIIRSILLNKDSRQNLFSGAQSEQQTQTSNLEKDKRPHRPQHVQLNLKDANGA 361

Query: 523  PDDKCIVKDLH---SEKQEKRTRNKDRPDRGVWT-LRRXXXXXXXXXXXXXXXXXXXXXX 690
            PDDK +  +LH    EKQEKRTRNKDR DR VWT LR                       
Sbjct: 362  PDDKLVGNELHCFPGEKQEKRTRNKDRSDRVVWTPLRPSDGSYASDESLLSSASQSVQSG 421

Query: 691  XXXXXGRLRDGKIDLSNMRSGDVKTVGSGRSSHSTLVGGSHRRIVCRGPINGVKD-DGSS 867
                 G L D K+D SN R G+VKT+GSGRS HS+L  GS +    RG  + V+D DGSS
Sbjct: 422  VDSSQGSLGDVKVDSSNSRGGEVKTLGSGRSGHSSLDNGSLKHFGRRGASHTVRDVDGSS 481

Query: 868  VISEGKPLQRGSASGYGSQEKQVWVQKSSSGS 963
               EGK  +RG ASGYGS EKQVWVQKSSSGS
Sbjct: 482  --GEGKLSKRGGASGYGSHEKQVWVQKSSSGS 511


>XP_011028362.1 PREDICTED: regulator of nonsense transcripts UPF3-like isoform X1
            [Populus euphratica]
          Length = 521

 Score =  249 bits (636), Expect = 9e-73
 Identities = 156/333 (46%), Positives = 186/333 (55%), Gaps = 12/333 (3%)
 Frame = +1

Query: 1    GSPXXXXXXXXXXXXXXXTTMYVLRDTAKKSSGKDKSTYILVPKRDDQGLDKPXXXXXXX 180
            GSP               TTMYVLRDTAK +SGKDKSTY+ VPKRD Q L          
Sbjct: 192  GSPSSSSLKRGSEKKRISTTMYVLRDTAKSTSGKDKSTYVQVPKRDGQQLSNAVTLGSGS 251

Query: 181  XXXXXXXXXXXXANSDAXXXXXXXXXXXEREIXXXXXXXXXXXXXXX--KNILSSPALKQ 354
                          +D+           E+EI                 +NI+SS  LK 
Sbjct: 252  GTAVLEDESGVSGITDSGKKKILLLKGKEKEISLVTGTMAQQQSISSSDRNIISSTVLK- 310

Query: 355  NQQRESSGRIIRGILLNKDAHQSQD-----EQQVQNSNLEKDKRPPRPPHVQLVVKDTNG 519
            +Q+RE+SGR+IR ILLNKD+   +      E Q+Q SNLEKDKRPPRPPH QL +KD NG
Sbjct: 311  SQRRETSGRMIRSILLNKDSRHIRSSGVHSEPQMQTSNLEKDKRPPRPPHAQLGLKDANG 370

Query: 520  VPDDKCIVKDLH---SEKQEKRTRNKDRPDRGVWT-LRRXXXXXXXXXXXXXXXXXXXXX 687
             PDDK +  DLH   +EKQEKRTRNKDRPDRGVWT LRR                     
Sbjct: 371  TPDDKVVGNDLHGFPNEKQEKRTRNKDRPDRGVWTPLRRSDGSYASDESLSSSASQSTQS 430

Query: 688  XXXXXXGRLRDGKIDLSNMRSGDVKTVGSGRSSHSTLVGGSHRRIVCRGPINGVKD-DGS 864
                  G   D K+D  N+RSG+VK +GSGRS+HS+L  GSH+    RGP + V+D +GS
Sbjct: 431  VFDSSQGNHGDVKVDNLNLRSGEVKVLGSGRSNHSSLDNGSHKHFGRRGPSHIVRDAEGS 490

Query: 865  SVISEGKPLQRGSASGYGSQEKQVWVQKSSSGS 963
            +V  E K  +RG ASGYGS EKQVWVQKS+SGS
Sbjct: 491  AV--EAKTPKRGGASGYGSHEKQVWVQKSTSGS 521


>GAV63295.1 Smg4_UPF3 domain-containing protein [Cephalotus follicularis]
          Length = 522

 Score =  248 bits (634), Expect = 2e-72
 Identities = 150/314 (47%), Positives = 183/314 (58%), Gaps = 11/314 (3%)
 Frame = +1

Query: 55   TTMYVLRDTAKKSSGKDKSTYILVPKRDD-QGLDKPXXXXXXXXXXXXXXXXXXXANSDA 231
            TTMYVLRD  K SSGKDK T+IL+ KRDD Q  +KP                    ++  
Sbjct: 212  TTMYVLRDPTKSSSGKDKPTHILLSKRDDHQPSEKPLAAAAGREPVEDESGVSGITDAGK 271

Query: 232  XXXXXXXXXXXEREIXXXXXXXXXXXXXXXKNILSSPALKQNQQRESSGRIIRGILLNKD 411
                       EREI                N+L S ALKQNQ+RE +G+  R I+LN+D
Sbjct: 272  KKLLLKGK---EREISDVSGMQPHNVTISVSNVLGSTALKQNQRREGNGKFNRAIVLNRD 328

Query: 412  AHQSQD-----EQQVQNSNLEKDKRPPRPPHVQLVVKDTNGVPDDKCIVKDLH---SEKQ 567
              QSQ      EQ+ Q+SNL+KDKRPPRP H+Q+V+KDTNG P+DK I  DLH   SEK 
Sbjct: 329  TRQSQSSGFQSEQKFQSSNLDKDKRPPRPHHMQMVLKDTNGAPEDKAITNDLHGASSEKI 388

Query: 568  EKRTRNKDRPDRGVWTLRRXXXXXXXXXXXXXXXXXXXXXXXXXXX-GRLRDGKIDLSNM 744
            EKRTRNKD+PDRGVWTLRR                            G   D K+D+S  
Sbjct: 389  EKRTRNKDKPDRGVWTLRRSDGSYASDESLSSSASQPPPQLQLDSLEGSHGDVKVDISIT 448

Query: 745  RSGDVKTVGSGRSSHSTLVGGSHRRIVCRGPINGVKD-DGSSVISEGKPLQRGSASGYGS 921
            R+G+V+ +G+ RSSHS++  GS++ +  RGP   VKD DGS V S+GKPL+RG ASGY S
Sbjct: 449  RTGEVRNLGTLRSSHSSIDNGSYKHVGRRGPTLSVKDADGSLVASDGKPLKRGGASGYVS 508

Query: 922  QEKQVWVQKSSSGS 963
             EKQVWVQKSSSGS
Sbjct: 509  HEKQVWVQKSSSGS 522


>XP_011028363.1 PREDICTED: regulator of nonsense transcripts UPF3-like isoform X2
            [Populus euphratica]
          Length = 520

 Score =  245 bits (626), Expect = 3e-71
 Identities = 156/333 (46%), Positives = 186/333 (55%), Gaps = 12/333 (3%)
 Frame = +1

Query: 1    GSPXXXXXXXXXXXXXXXTTMYVLRDTAKKSSGKDKSTYILVPKRDDQGLDKPXXXXXXX 180
            GSP               TTMYVLRDTAK +SGKDKSTY+ VPKRD Q L          
Sbjct: 192  GSPSSSSLKRGSEKKRISTTMYVLRDTAKSTSGKDKSTYVQVPKRDGQQLSNAVTLGSGS 251

Query: 181  XXXXXXXXXXXXANSDAXXXXXXXXXXXEREIXXXXXXXXXXXXXXX--KNILSSPALKQ 354
                          +D+           E+EI                 +NI+SS  LK 
Sbjct: 252  GTAVLEDERVSGI-TDSGKKKILLLKGKEKEISLVTGTMAQQQSISSSDRNIISSTVLK- 309

Query: 355  NQQRESSGRIIRGILLNKDAHQSQD-----EQQVQNSNLEKDKRPPRPPHVQLVVKDTNG 519
            +Q+RE+SGR+IR ILLNKD+   +      E Q+Q SNLEKDKRPPRPPH QL +KD NG
Sbjct: 310  SQRRETSGRMIRSILLNKDSRHIRSSGVHSEPQMQTSNLEKDKRPPRPPHAQLGLKDANG 369

Query: 520  VPDDKCIVKDLH---SEKQEKRTRNKDRPDRGVWT-LRRXXXXXXXXXXXXXXXXXXXXX 687
             PDDK +  DLH   +EKQEKRTRNKDRPDRGVWT LRR                     
Sbjct: 370  TPDDKVVGNDLHGFPNEKQEKRTRNKDRPDRGVWTPLRRSDGSYASDESLSSSASQSTQS 429

Query: 688  XXXXXXGRLRDGKIDLSNMRSGDVKTVGSGRSSHSTLVGGSHRRIVCRGPINGVKD-DGS 864
                  G   D K+D  N+RSG+VK +GSGRS+HS+L  GSH+    RGP + V+D +GS
Sbjct: 430  VFDSSQGNHGDVKVDNLNLRSGEVKVLGSGRSNHSSLDNGSHKHFGRRGPSHIVRDAEGS 489

Query: 865  SVISEGKPLQRGSASGYGSQEKQVWVQKSSSGS 963
            +V  E K  +RG ASGYGS EKQVWVQKS+SGS
Sbjct: 490  AV--EAKTPKRGGASGYGSHEKQVWVQKSTSGS 520


>XP_006385051.1 hypothetical protein POPTR_0004s23450g [Populus trichocarpa]
            ERP62848.1 hypothetical protein POPTR_0004s23450g
            [Populus trichocarpa]
          Length = 520

 Score =  245 bits (626), Expect = 3e-71
 Identities = 153/330 (46%), Positives = 184/330 (55%), Gaps = 12/330 (3%)
 Frame = +1

Query: 1    GSPXXXXXXXXXXXXXXXTTMYVLRDTAKKSSGKDKSTYILVPKRDDQGLDKPXXXXXXX 180
            GSP               TTMYVLRDTAK +SGKDKSTY+ VPKRDDQ L          
Sbjct: 192  GSPSSSSLKRGSEKKRISTTMYVLRDTAKSTSGKDKSTYVHVPKRDDQQLSNAVTLGSGS 251

Query: 181  XXXXXXXXXXXXANSDAXXXXXXXXXXXEREIXXXXXXXXXXXXXXX--KNILSSPALKQ 354
                          +D+           E+EI                 +NI+SS ALK 
Sbjct: 252  GTAVLEDESVVSGITDSGKKKILLLKGKEKEISLVTGTMSQQQSISSSDRNIISSTALK- 310

Query: 355  NQQRESSGRIIRGILLNKDAHQSQD-----EQQVQNSNLEKDKRPPRPPHVQLVVKDTNG 519
            +Q+RE+SGR+IR ILLNKD+   +      E Q+Q SNLEK+KRPPRPPH QL +KD NG
Sbjct: 311  SQRRETSGRMIRSILLNKDSRHIRSSGVHSEPQMQTSNLEKEKRPPRPPHAQLGLKDANG 370

Query: 520  VPDDKCIVKDLH---SEKQEKRTRNKDRPDRGVWT-LRRXXXXXXXXXXXXXXXXXXXXX 687
             PDDK +  DLH   +EKQEKRTRNKDRPDRGVWT LRR                     
Sbjct: 371  TPDDKVVGNDLHGFPNEKQEKRTRNKDRPDRGVWTPLRRSDGSYASDESLLSSASQSTQS 430

Query: 688  XXXXXXGRLRDGKIDLSNMRSGDVKTVGSGRSSHSTLVGGSHRRIVCRGPINGVKD-DGS 864
                  G   D K+D  N+RSG+VK +GSGR +HS+L  GSH+    RGP + V+D DGS
Sbjct: 431  VFDSSQGNHGDVKVDSLNLRSGEVKVLGSGRGNHSSLDNGSHKHFGRRGPSHIVRDADGS 490

Query: 865  SVISEGKPLQRGSASGYGSQEKQVWVQKSS 954
            +V  E K  +RG +SGYGS EKQVWVQKS+
Sbjct: 491  TV--EAKTPKRGGSSGYGSHEKQVWVQKST 518


>XP_019079129.1 PREDICTED: regulator of nonsense transcripts UPF3 isoform X3 [Vitis
            vinifera]
          Length = 528

 Score =  244 bits (624), Expect = 6e-71
 Identities = 154/302 (50%), Positives = 174/302 (57%), Gaps = 11/302 (3%)
 Frame = +1

Query: 55   TTMYVLRDTAKKSSGKDKSTYILVPKRDDQGL-DKPXXXXXXXXXXXXXXXXXXXANSDA 231
            TTMYVLRDTAK +S KDKST+ILVPKRDDQ L DK                       DA
Sbjct: 210  TTMYVLRDTAKSTSAKDKSTFILVPKRDDQLLSDKSVNLAAGGGAEALEEESGVSGAVDA 269

Query: 232  XXXXXXXXXXXEREIXXXXXXXXXXXXXXXKNILSSPALKQNQQRESSGRIIRGILLNKD 411
                       EREI               KNIL + A KQNQ+RE SGRIIR ILLNKD
Sbjct: 270  GKKKVLLLKGKEREISHNVTSPV-------KNILGANAPKQNQRREGSGRIIRSILLNKD 322

Query: 412  AHQSQD-----EQQVQNSNLEKDKRPPRPPHVQLVVKDTNGVPDDKCIVKDLH---SEKQ 567
            A QSQ      EQQ Q SNLEK+KRPPRPPH+QL  K+TNG  DDK +  D+H   SEKQ
Sbjct: 323  ARQSQSSMFQTEQQSQASNLEKEKRPPRPPHIQLASKETNGAQDDKVVGNDVHSFVSEKQ 382

Query: 568  EKRTRNKDRPDRGVWT-LRRXXXXXXXXXXXXXXXXXXXXXXXXXXXGRLRDGKIDLSNM 744
            +KRTRNKDRPDRGVWT LRR                           G   + + D+SN 
Sbjct: 383  DKRTRNKDRPDRGVWTPLRR--SDGSHASDESLSSSASQPTSSDFPEGSHGEMRSDMSNA 440

Query: 745  RSGDVKTVGSGRSSHSTLVGGSHRRIVCRGPINGVKD-DGSSVISEGKPLQRGSASGYGS 921
            RSG+VK +GSGR  HS L  GSH+    RGP + VKD DGSS++SEGK  +RGSA GYGS
Sbjct: 441  RSGEVKALGSGRGGHSALDNGSHKHSGRRGPTHSVKDADGSSIVSEGKHSKRGSAPGYGS 500

Query: 922  QE 927
             E
Sbjct: 501  HE 502


>XP_019079128.1 PREDICTED: regulator of nonsense transcripts UPF3 isoform X2 [Vitis
            vinifera]
          Length = 529

 Score =  244 bits (624), Expect = 6e-71
 Identities = 154/302 (50%), Positives = 174/302 (57%), Gaps = 11/302 (3%)
 Frame = +1

Query: 55   TTMYVLRDTAKKSSGKDKSTYILVPKRDDQGL-DKPXXXXXXXXXXXXXXXXXXXANSDA 231
            TTMYVLRDTAK +S KDKST+ILVPKRDDQ L DK                       DA
Sbjct: 210  TTMYVLRDTAKSTSAKDKSTFILVPKRDDQLLSDKSVNLAAGGGAEALEEESGVSGAVDA 269

Query: 232  XXXXXXXXXXXEREIXXXXXXXXXXXXXXXKNILSSPALKQNQQRESSGRIIRGILLNKD 411
                       EREI               KNIL + A KQNQ+RE SGRIIR ILLNKD
Sbjct: 270  GKKKVLLLKGKEREISHQNVTSPV------KNILGANAPKQNQRREGSGRIIRSILLNKD 323

Query: 412  AHQSQD-----EQQVQNSNLEKDKRPPRPPHVQLVVKDTNGVPDDKCIVKDLH---SEKQ 567
            A QSQ      EQQ Q SNLEK+KRPPRPPH+QL  K+TNG  DDK +  D+H   SEKQ
Sbjct: 324  ARQSQSSMFQTEQQSQASNLEKEKRPPRPPHIQLASKETNGAQDDKVVGNDVHSFVSEKQ 383

Query: 568  EKRTRNKDRPDRGVWT-LRRXXXXXXXXXXXXXXXXXXXXXXXXXXXGRLRDGKIDLSNM 744
            +KRTRNKDRPDRGVWT LRR                           G   + + D+SN 
Sbjct: 384  DKRTRNKDRPDRGVWTPLRR--SDGSHASDESLSSSASQPTSSDFPEGSHGEMRSDMSNA 441

Query: 745  RSGDVKTVGSGRSSHSTLVGGSHRRIVCRGPINGVKD-DGSSVISEGKPLQRGSASGYGS 921
            RSG+VK +GSGR  HS L  GSH+    RGP + VKD DGSS++SEGK  +RGSA GYGS
Sbjct: 442  RSGEVKALGSGRGGHSALDNGSHKHSGRRGPTHSVKDADGSSIVSEGKHSKRGSAPGYGS 501

Query: 922  QE 927
             E
Sbjct: 502  HE 503


>XP_019079126.1 PREDICTED: regulator of nonsense transcripts UPF3 isoform X1 [Vitis
            vinifera] XP_019079127.1 PREDICTED: regulator of nonsense
            transcripts UPF3 isoform X1 [Vitis vinifera]
          Length = 533

 Score =  244 bits (624), Expect = 7e-71
 Identities = 154/302 (50%), Positives = 174/302 (57%), Gaps = 11/302 (3%)
 Frame = +1

Query: 55   TTMYVLRDTAKKSSGKDKSTYILVPKRDDQGL-DKPXXXXXXXXXXXXXXXXXXXANSDA 231
            TTMYVLRDTAK +S KDKST+ILVPKRDDQ L DK                       DA
Sbjct: 210  TTMYVLRDTAKSTSAKDKSTFILVPKRDDQLLSDKSVNLAAGGGAEALEEESGVSGAVDA 269

Query: 232  XXXXXXXXXXXEREIXXXXXXXXXXXXXXXKNILSSPALKQNQQRESSGRIIRGILLNKD 411
                       EREI               KNIL + A KQNQ+RE SGRIIR ILLNKD
Sbjct: 270  GKKKVLLLKGKEREISHHLLQQNVTSPV--KNILGANAPKQNQRREGSGRIIRSILLNKD 327

Query: 412  AHQSQD-----EQQVQNSNLEKDKRPPRPPHVQLVVKDTNGVPDDKCIVKDLH---SEKQ 567
            A QSQ      EQQ Q SNLEK+KRPPRPPH+QL  K+TNG  DDK +  D+H   SEKQ
Sbjct: 328  ARQSQSSMFQTEQQSQASNLEKEKRPPRPPHIQLASKETNGAQDDKVVGNDVHSFVSEKQ 387

Query: 568  EKRTRNKDRPDRGVWT-LRRXXXXXXXXXXXXXXXXXXXXXXXXXXXGRLRDGKIDLSNM 744
            +KRTRNKDRPDRGVWT LRR                           G   + + D+SN 
Sbjct: 388  DKRTRNKDRPDRGVWTPLRR--SDGSHASDESLSSSASQPTSSDFPEGSHGEMRSDMSNA 445

Query: 745  RSGDVKTVGSGRSSHSTLVGGSHRRIVCRGPINGVKD-DGSSVISEGKPLQRGSASGYGS 921
            RSG+VK +GSGR  HS L  GSH+    RGP + VKD DGSS++SEGK  +RGSA GYGS
Sbjct: 446  RSGEVKALGSGRGGHSALDNGSHKHSGRRGPTHSVKDADGSSIVSEGKHSKRGSAPGYGS 505

Query: 922  QE 927
             E
Sbjct: 506  HE 507


>OAY39704.1 hypothetical protein MANES_10G116400 [Manihot esculenta] OAY39707.1
            hypothetical protein MANES_10G116400 [Manihot esculenta]
          Length = 509

 Score =  243 bits (619), Expect = 2e-70
 Identities = 153/331 (46%), Positives = 177/331 (53%), Gaps = 10/331 (3%)
 Frame = +1

Query: 1    GSPXXXXXXXXXXXXXXXTTMYVLRDTAKKSSGKDKSTYILVPKRDDQGL-DKPXXXXXX 177
            GSP               TTMYVLRD+ K +SGKDKSTYIL+PKRDDQ L DK       
Sbjct: 190  GSPSSSSSKRSSDKKRGSTTMYVLRDSVKSTSGKDKSTYILIPKRDDQHLSDKAVNLASA 249

Query: 178  XXXXXXXXXXXXXANSDAXXXXXXXXXXXEREIXXXXXXXXXXXXXXXKNILSSPALKQN 357
                           +D            E+EI                   +S  LKQ+
Sbjct: 250  SGTEVLEDESGVSGITDTGKRKILLLKGKEKEISTLCGGMLQQNTTSFDKNQTSSVLKQS 309

Query: 358  QQRESSGRIIRGILLNKDAHQS-----QDEQQVQNSNLEKDKRPPRPPHVQLVVKDTNGV 522
            Q+RE++GRIIR ILL+KD+ Q+     Q EQQ Q SNLEKDKRPPRP HVQL++KD NG 
Sbjct: 310  QRREATGRIIRSILLHKDSRQNHSSGVQSEQQTQTSNLEKDKRPPRPQHVQLILKDANGA 369

Query: 523  PDDKCIVKDLHS---EKQEKRTRNKDRPDRGVWT-LRRXXXXXXXXXXXXXXXXXXXXXX 690
             DDK +  DLHS   EKQEKRTRNKDRPDRGVW  LRR                      
Sbjct: 370  SDDKVVGNDLHSFSGEKQEKRTRNKDRPDRGVWAPLRR---------SDGSCPSDESSLF 420

Query: 691  XXXXXGRLRDGKIDLSNMRSGDVKTVGSGRSSHSTLVGGSHRRIVCRGPINGVKDDGSSV 870
                 G L D K++  N R G++KT+G GR  HS+L  GSH+    RGP      DGSS 
Sbjct: 421  SASHSGNLGDIKVEPLNSRGGEIKTLGGGRGGHSSLDNGSHKHFGRRGPHTVRDVDGSS- 479

Query: 871  ISEGKPLQRGSASGYGSQEKQVWVQKSSSGS 963
              EGK  +R   SGYGS EKQVWVQKSSSGS
Sbjct: 480  -GEGKLSKRVGVSGYGSHEKQVWVQKSSSGS 509


>XP_007041200.2 PREDICTED: regulator of nonsense transcripts UPF3 isoform X2
            [Theobroma cacao]
          Length = 514

 Score =  242 bits (618), Expect = 3e-70
 Identities = 155/312 (49%), Positives = 178/312 (57%), Gaps = 9/312 (2%)
 Frame = +1

Query: 55   TTMYVLRDTAKKSSGKDKSTYILVPKRDDQGL-DKPXXXXXXXXXXXXXXXXXXXANSDA 231
            TTMYVLRD+ K +SGKDKSTYILV KRD+Q L DK                      +DA
Sbjct: 210  TTMYVLRDSLKNASGKDKSTYILVSKRDEQQLSDKHVALASSMGTEISEEESGVPGITDA 269

Query: 232  XXXXXXXXXXXEREIXXXXXXXXXXXXXXX--KNILSSPALKQNQQRESSGRIIRGILLN 405
                       E+EI                 K IL S   KQN +RE  GR+IRGILLN
Sbjct: 270  VKKKVLLLKGKEKEISPVAGNVLHQQNATSPIKTILGSTPTKQNSRRE--GRMIRGILLN 327

Query: 406  KDAHQSQD-----EQQVQNSNLEKDKRPPRPPHVQLVVKDTNGVPDDKCIVKDLH-SEKQ 567
            KDA Q+Q      EQQ++ SNLEKD+RPPR  H  LV+KDTN   DDK +  DLH SEK 
Sbjct: 328  KDARQNQSSGVQSEQQIRTSNLEKDRRPPRHSHSHLVLKDTNTASDDKVVGNDLHGSEKP 387

Query: 568  EKRTRNKDRPDRGVWTLRRXXXXXXXXXXXXXXXXXXXXXXXXXXXGRLRDGKIDLSNMR 747
            E+R RNKDRPDRGVWTLRR                           G   D K+DLSN+R
Sbjct: 388  ERRCRNKDRPDRGVWTLRRSDGSYASDESMSSSASQSALIPLDPLEGTYGDTKVDLSNVR 447

Query: 748  SGDVKTVGSGRSSHSTLVGGSHRRIVCRGPINGVKDDGSSVISEGKPLQRGSASGYGSQE 927
            S  VKTVGSGR  +S+L  GSH + V R    G   DGSSV+S+GKP +RG A+GYGS E
Sbjct: 448  SVQVKTVGSGR--NSSLDNGSHNKHVSR---RGAVADGSSVMSDGKPGKRGCAAGYGSHE 502

Query: 928  KQVWVQKSSSGS 963
            KQVWVQKSSSGS
Sbjct: 503  KQVWVQKSSSGS 514


>EOX97031.1 Smg-4/UPF3 family protein, putative isoform 1 [Theobroma cacao]
          Length = 514

 Score =  242 bits (618), Expect = 3e-70
 Identities = 155/312 (49%), Positives = 178/312 (57%), Gaps = 9/312 (2%)
 Frame = +1

Query: 55   TTMYVLRDTAKKSSGKDKSTYILVPKRDDQGL-DKPXXXXXXXXXXXXXXXXXXXANSDA 231
            TTMYVLRD+ K +SGKDKSTYILV KRD+Q L DK                      +DA
Sbjct: 210  TTMYVLRDSLKNASGKDKSTYILVSKRDEQQLSDKHVALASSMGTEISEEESGVPGITDA 269

Query: 232  XXXXXXXXXXXEREIXXXXXXXXXXXXXXX--KNILSSPALKQNQQRESSGRIIRGILLN 405
                       E+EI                 K IL S   KQN +RE  GR+IRGILLN
Sbjct: 270  VKKKVLLLKGKEKEISPVAGNVLHQQNVTSPIKTILGSTPTKQNSRRE--GRMIRGILLN 327

Query: 406  KDAHQSQD-----EQQVQNSNLEKDKRPPRPPHVQLVVKDTNGVPDDKCIVKDLH-SEKQ 567
            KDA Q+Q      EQQ++ SNLEKD+RPPR  H  LV+KDTN   DDK +  DLH SEK 
Sbjct: 328  KDARQNQSSGVQSEQQIRTSNLEKDRRPPRHSHSHLVLKDTNTASDDKVVGNDLHGSEKP 387

Query: 568  EKRTRNKDRPDRGVWTLRRXXXXXXXXXXXXXXXXXXXXXXXXXXXGRLRDGKIDLSNMR 747
            E+R RNKDRPDRGVWTLRR                           G   D K+DLSN+R
Sbjct: 388  ERRCRNKDRPDRGVWTLRRSDGSYASDESMSSSASQSALIPLDPLEGTYGDTKVDLSNVR 447

Query: 748  SGDVKTVGSGRSSHSTLVGGSHRRIVCRGPINGVKDDGSSVISEGKPLQRGSASGYGSQE 927
            S  VKTVGSGR  +S+L  GSH + V R    G   DGSSV+S+GKP +RG A+GYGS E
Sbjct: 448  SVQVKTVGSGR--NSSLDNGSHNKHVSR---RGAVADGSSVMSDGKPGKRGCAAGYGSHE 502

Query: 928  KQVWVQKSSSGS 963
            KQVWVQKSSSGS
Sbjct: 503  KQVWVQKSSSGS 514