BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Phellodendron21_contig00006794
         (1593 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_006426597.1 hypothetical protein CICLE_v10025597mg [Citrus cl...   699   0.0  
XP_006465974.1 PREDICTED: DNA-directed RNA polymerase I subunit ...   698   0.0  
XP_006426598.1 hypothetical protein CICLE_v10025597mg [Citrus cl...   657   0.0  
XP_018835108.1 PREDICTED: uncharacterized protein LOC109002008 [...   463   e-157
GAV84934.1 RNA_pol_I_A49 domain-containing protein [Cephalotus f...   452   e-153
XP_010062676.1 PREDICTED: DNA-directed RNA polymerase I subunit ...   444   e-150
XP_002278228.1 PREDICTED: DNA-directed RNA polymerase I subunit ...   443   e-149
CBI35920.3 unnamed protein product, partial [Vitis vinifera]          439   e-148
XP_006369274.1 hypothetical protein POPTR_0001s20580g [Populus t...   440   e-147
XP_011014273.1 PREDICTED: DNA-directed RNA polymerase I subunit ...   436   e-145
XP_011007736.1 PREDICTED: DNA-directed RNA polymerase I subunit ...   435   e-145
XP_007039490.2 PREDICTED: DNA-directed RNA polymerase I subunit ...   431   e-144
EOY23991.1 DNA-directed RNA polymerase I subunit rpa49, putative...   430   e-143
OAY53180.1 hypothetical protein MANES_04G142200 [Manihot esculenta]   431   e-143
XP_010273794.1 PREDICTED: DNA-directed RNA polymerase I subunit ...   425   e-142
XP_004141689.1 PREDICTED: DNA-directed RNA polymerase I subunit ...   424   e-142
XP_015902884.1 PREDICTED: DNA-directed RNA polymerase I subunit ...   423   e-141
XP_010087702.1 DNA-directed RNA polymerase I subunit rpa49 [Moru...   421   e-140
XP_002521367.1 PREDICTED: DNA-directed RNA polymerase I subunit ...   421   e-140
XP_008462335.1 PREDICTED: DNA-directed RNA polymerase I subunit ...   419   e-139

>XP_006426597.1 hypothetical protein CICLE_v10025597mg [Citrus clementina] ESR39837.1
            hypothetical protein CICLE_v10025597mg [Citrus
            clementina]
          Length = 447

 Score =  699 bits (1805), Expect = 0.0
 Identities = 361/452 (79%), Positives = 383/452 (84%), Gaps = 1/452 (0%)
 Frame = +3

Query: 60   MRIDEETRTKKKHEQAQDQAHXXXXXXXXXXXXXXXXXXXXIXXXXXXXXXXXXXXRVKA 239
            MR DEETRTKK+HE  Q+Q                                     RVKA
Sbjct: 1    MREDEETRTKKEHESQQEQETEGPKKKNKKRKKDKANTTID-----EQPEPELEPERVKA 55

Query: 240  KVQFIPDQPNKTPPLVGYFPSMYNPNED-PDDEKRPRVRVYRNMNEKKNRTGRMELVVSP 416
            KVQFIP+QPNK PPLVGYFPS+Y P+ D PD+E RP+VRVYRNMNEKKNRTGRMELVVSP
Sbjct: 56   KVQFIPEQPNKAPPLVGYFPSIYKPDVDHPDEEMRPKVRVYRNMNEKKNRTGRMELVVSP 115

Query: 417  RDSSVEYVGTSYSGEAMAPQFCHYAVGVLNKKTQTLKIVPIAANKIFRLEPRVGGSDVAD 596
            RDSSV+YVGTSYSGEAMAPQFCHYAVGVL++ TQTLKIVPIAANKIFRLEPRV GSDVAD
Sbjct: 116  RDSSVDYVGTSYSGEAMAPQFCHYAVGVLDRNTQTLKIVPIAANKIFRLEPRVRGSDVAD 175

Query: 597  KEAGNEEVSAEVQANMKAMLDTRYGTKKSLRQSKKMNALNKENDPETQKDLALKMKSVKI 776
            K+AG  E+SAEVQANMKAMLDTRYGTKKSLRQSKKM+ALNKENDPE+QKDLALKMKSVKI
Sbjct: 176  KDAGKGEISAEVQANMKAMLDTRYGTKKSLRQSKKMHALNKENDPESQKDLALKMKSVKI 235

Query: 777  NKEALESSTSDTVLNVPPFDVNATAPQQAYPLDKIILKGEWDFLQDIFKLLSVGLEVTNN 956
            NKEALES+TSDTVLNVPP+D NAT PQQAYPLDKIILKGEWDF+QDIF  +S G EV ++
Sbjct: 236  NKEALESTTSDTVLNVPPYDANATTPQQAYPLDKIILKGEWDFVQDIFNHVSAGSEVISD 295

Query: 957  ACPSFVCNRIHKLRESQDDVEKQTLASIFLYITHLVKFKDQHSMDGRASAKNHRIPNILY 1136
            A PSFVCNRIHKLRE QDDVEKQTLASIF YITHLVKFKDQHSMDG ASAK HRIP IL+
Sbjct: 296  AYPSFVCNRIHKLREIQDDVEKQTLASIFSYITHLVKFKDQHSMDGGASAKQHRIPKILH 355

Query: 1137 QKFMTMFFDAESKRLSDDKIHLLISYVLVLVLHADDFRTNPTDIANDLRMSEVKLRDHFE 1316
            QKF+T F DAESKRLSDDKIHLLISYVLVL LHADDFRTNPTDIA DLRMSE KLRDHFE
Sbjct: 356  QKFLTSFSDAESKRLSDDKIHLLISYVLVLTLHADDFRTNPTDIAKDLRMSEFKLRDHFE 415

Query: 1317 KLGCKLSREKNMLYATLPVPLQFPKAKQRRRR 1412
            KLGCKL REKNMLYATLPVPLQFPKA QRRRR
Sbjct: 416  KLGCKLLREKNMLYATLPVPLQFPKAIQRRRR 447


>XP_006465974.1 PREDICTED: DNA-directed RNA polymerase I subunit RPA49 [Citrus
            sinensis] KDO65131.1 hypothetical protein
            CISIN_1g013236mg [Citrus sinensis]
          Length = 447

 Score =  698 bits (1801), Expect = 0.0
 Identities = 360/452 (79%), Positives = 383/452 (84%), Gaps = 1/452 (0%)
 Frame = +3

Query: 60   MRIDEETRTKKKHEQAQDQAHXXXXXXXXXXXXXXXXXXXXIXXXXXXXXXXXXXXRVKA 239
            MR DEETR+KK+HE  Q+Q                                     RVKA
Sbjct: 1    MREDEETRSKKEHESQQEQETEGPKKKNKKRKKDKANTTID-----EQPEPELEPERVKA 55

Query: 240  KVQFIPDQPNKTPPLVGYFPSMYNPNED-PDDEKRPRVRVYRNMNEKKNRTGRMELVVSP 416
            KVQFIP+QPNK PPLVGYFPS+Y P+ D PD+E RP+VRVYRNMNEKKNRTGRMELVVSP
Sbjct: 56   KVQFIPEQPNKAPPLVGYFPSIYKPDVDHPDEEMRPKVRVYRNMNEKKNRTGRMELVVSP 115

Query: 417  RDSSVEYVGTSYSGEAMAPQFCHYAVGVLNKKTQTLKIVPIAANKIFRLEPRVGGSDVAD 596
            RDSSV+YVGTSYSGEAMAPQFCHYAVGVL++ TQTLKIVPIAANKIFRLEPRV GSDVAD
Sbjct: 116  RDSSVDYVGTSYSGEAMAPQFCHYAVGVLDRSTQTLKIVPIAANKIFRLEPRVRGSDVAD 175

Query: 597  KEAGNEEVSAEVQANMKAMLDTRYGTKKSLRQSKKMNALNKENDPETQKDLALKMKSVKI 776
            K+AG  E+SAEVQANMKAMLDTRYGTKKSLRQSKKM+ALNKENDPE+QKDLALKMKSVKI
Sbjct: 176  KDAGKGEISAEVQANMKAMLDTRYGTKKSLRQSKKMHALNKENDPESQKDLALKMKSVKI 235

Query: 777  NKEALESSTSDTVLNVPPFDVNATAPQQAYPLDKIILKGEWDFLQDIFKLLSVGLEVTNN 956
            NKEALES+TSDTVLNVPP+D NAT PQQAYPLDKIILKGEWDF+QDIF  +S G EV ++
Sbjct: 236  NKEALESTTSDTVLNVPPYDANATTPQQAYPLDKIILKGEWDFVQDIFNHVSAGSEVISD 295

Query: 957  ACPSFVCNRIHKLRESQDDVEKQTLASIFLYITHLVKFKDQHSMDGRASAKNHRIPNILY 1136
            A PSFVCNRIHKLRE QDDVEKQTLASIF YITHLVKFKDQHSMDG ASAK HRIP IL+
Sbjct: 296  AYPSFVCNRIHKLREIQDDVEKQTLASIFSYITHLVKFKDQHSMDGGASAKQHRIPKILH 355

Query: 1137 QKFMTMFFDAESKRLSDDKIHLLISYVLVLVLHADDFRTNPTDIANDLRMSEVKLRDHFE 1316
            QKF+T F DAESKRLSDDKIHLLISYVLVL LHADDFRTNPTDIA DLRMSE KLRDHFE
Sbjct: 356  QKFLTSFSDAESKRLSDDKIHLLISYVLVLTLHADDFRTNPTDIAKDLRMSEFKLRDHFE 415

Query: 1317 KLGCKLSREKNMLYATLPVPLQFPKAKQRRRR 1412
            KLGCKL REKNMLYATLPVPLQFPKA QRRRR
Sbjct: 416  KLGCKLLREKNMLYATLPVPLQFPKAIQRRRR 447


>XP_006426598.1 hypothetical protein CICLE_v10025597mg [Citrus clementina] ESR39838.1
            hypothetical protein CICLE_v10025597mg [Citrus
            clementina]
          Length = 426

 Score =  657 bits (1694), Expect = 0.0
 Identities = 345/452 (76%), Positives = 366/452 (80%), Gaps = 1/452 (0%)
 Frame = +3

Query: 60   MRIDEETRTKKKHEQAQDQAHXXXXXXXXXXXXXXXXXXXXIXXXXXXXXXXXXXXRVKA 239
            MR DEETRTKK+HE  Q+Q                                     RVKA
Sbjct: 1    MREDEETRTKKEHESQQEQETEGPKKKNKKRKKDKANTTID-----EQPEPELEPERVKA 55

Query: 240  KVQFIPDQPNKTPPLVGYFPSMYNPNED-PDDEKRPRVRVYRNMNEKKNRTGRMELVVSP 416
            KVQFIP+QPNK PPLVGYFPS+Y P+ D PD+E RP+VRVYRNMNEKKNRTGRMELVVSP
Sbjct: 56   KVQFIPEQPNKAPPLVGYFPSIYKPDVDHPDEEMRPKVRVYRNMNEKKNRTGRMELVVSP 115

Query: 417  RDSSVEYVGTSYSGEAMAPQFCHYAVGVLNKKTQTLKIVPIAANKIFRLEPRVGGSDVAD 596
            RDSSV+YVGTSYSGEAMAPQFCHYAVGVL++ TQTLKIVPIAANKIFRLEPRV GSDVAD
Sbjct: 116  RDSSVDYVGTSYSGEAMAPQFCHYAVGVLDRNTQTLKIVPIAANKIFRLEPRVRGSDVAD 175

Query: 597  KEAGNEEVSAEVQANMKAMLDTRYGTKKSLRQSKKMNALNKENDPETQKDLALKMKSVKI 776
            K+AG  E+SAEVQANMKAMLDTRYGTKKSLRQSKKM+ALNKENDPE+QKDLALKMKSVKI
Sbjct: 176  KDAGKGEISAEVQANMKAMLDTRYGTKKSLRQSKKMHALNKENDPESQKDLALKMKSVKI 235

Query: 777  NKEALESSTSDTVLNVPPFDVNATAPQQAYPLDKIILKGEWDFLQDIFKLLSVGLEVTNN 956
            NKEALES+TSDTVLNVPP+D NAT PQQAYPLDKIILKGEWDF+QDIF  +S G      
Sbjct: 236  NKEALESTTSDTVLNVPPYDANATTPQQAYPLDKIILKGEWDFVQDIFNHVSAG------ 289

Query: 957  ACPSFVCNRIHKLRESQDDVEKQTLASIFLYITHLVKFKDQHSMDGRASAKNHRIPNILY 1136
                           S+DDVEKQTLASIF YITHLVKFKDQHSMDG ASAK HRIP IL+
Sbjct: 290  ---------------SEDDVEKQTLASIFSYITHLVKFKDQHSMDGGASAKQHRIPKILH 334

Query: 1137 QKFMTMFFDAESKRLSDDKIHLLISYVLVLVLHADDFRTNPTDIANDLRMSEVKLRDHFE 1316
            QKF+T F DAESKRLSDDKIHLLISYVLVL LHADDFRTNPTDIA DLRMSE KLRDHFE
Sbjct: 335  QKFLTSFSDAESKRLSDDKIHLLISYVLVLTLHADDFRTNPTDIAKDLRMSEFKLRDHFE 394

Query: 1317 KLGCKLSREKNMLYATLPVPLQFPKAKQRRRR 1412
            KLGCKL REKNMLYATLPVPLQFPKA QRRRR
Sbjct: 395  KLGCKLLREKNMLYATLPVPLQFPKAIQRRRR 426


>XP_018835108.1 PREDICTED: uncharacterized protein LOC109002008 [Juglans regia]
          Length = 438

 Score =  463 bits (1192), Expect = e-157
 Identities = 238/402 (59%), Positives = 306/402 (76%), Gaps = 8/402 (1%)
 Frame = +3

Query: 231  VKAKVQFIPDQPNKTPPLVGYFPSMYNPNEDPD-----DEKRPRVRVYRNMNEKKNRTGR 395
            V+A+VQ I + P K  P VGYFPS Y+P+++       + + P V VYR+    K    R
Sbjct: 42   VQAQVQVIHEDPQKASPFVGYFPSGYDPSKNYGGNNCLETESPSVTVYRSQKWSK----R 97

Query: 396  MELVVSPRDSSVEYVGTSYSGEAMAPQFCHYAVGVLNKKTQTLKIVPIAANKIFRLEPRV 575
             +LVVSP  S+V++VGT+YSGEAMA Q C YA+GV +K+ QTLKI P+A  KIFRLEP+V
Sbjct: 98   FQLVVSPTGSNVDFVGTNYSGEAMAGQQCRYALGVFDKEAQTLKIAPVACGKIFRLEPKV 157

Query: 576  GGSDVADKE---AGNEEVSAEVQANMKAMLDTRYGTKKSLRQSKKMNALNKENDPETQKD 746
             G DVAD+E      EE+SA+ +      L   YGTKKS++++KK +ALN+E+DP +QK+
Sbjct: 158  RGLDVADEEPESTAKEELSAQQRVYKMRELTNLYGTKKSIKEAKKKHALNQEDDPNSQKE 217

Query: 747  LALKMKSVKINKEALESSTSDTVLNVPPFDVNATAPQQAYPLDKIILKGEWDFLQDIFKL 926
            L  K+K VKINKEALES+ +    NVPP+D +AT+PQ+AYPLDKIILKGEW FL+DIF+L
Sbjct: 218  LDGKIKEVKINKEALESTDAHIARNVPPYDASATSPQEAYPLDKIILKGEWGFLEDIFEL 277

Query: 927  LSVGLEVTNNACPSFVCNRIHKLRESQDDVEKQTLASIFLYITHLVKFKDQHSMDGRASA 1106
            L VG EV ++A P+FVCNRIHKL+E QD+VEK+TL+ IF Y+THL+KFKDQHSMDG +SA
Sbjct: 278  LQVGAEVASDAYPTFVCNRIHKLQEIQDEVEKRTLSCIFSYVTHLIKFKDQHSMDGVSSA 337

Query: 1107 KNHRIPNILYQKFMTMFFDAESKRLSDDKIHLLISYVLVLVLHADDFRTNPTDIANDLRM 1286
            K H+IP+IL+QKF TM F   SKRLS +K  LLISYVLVL L+AD+FRT+P+DIA DLR 
Sbjct: 338  KGHKIPSILFQKFSTM-FSPVSKRLSAEKNDLLISYVLVLTLYADEFRTDPSDIAKDLRT 396

Query: 1287 SEVKLRDHFEKLGCKLSREKNMLYATLPVPLQFPKAKQRRRR 1412
            S +KLR H+E LGCKLSR+ N++  TLP+PLQFP  +Q+RRR
Sbjct: 397  SSIKLRVHYEHLGCKLSRQNNLILFTLPLPLQFPMVRQKRRR 438


>GAV84934.1 RNA_pol_I_A49 domain-containing protein [Cephalotus follicularis]
          Length = 431

 Score =  452 bits (1164), Expect = e-153
 Identities = 228/396 (57%), Positives = 305/396 (77%), Gaps = 2/396 (0%)
 Frame = +3

Query: 231  VKAKVQFIPDQPNKTPPLVGYFPSMYNPNEDPDDEKRPRVRVYRNMNEKKNRTGRMELVV 410
            ++ K+++I +Q NK  PLVGYFPS ++P     +++ P+VR++RN   K+++  R++LVV
Sbjct: 37   LQTKMEYIHEQANKGLPLVGYFPSGFDPQSQETNKEPPKVRIFRNKLSKRDK--RLQLVV 94

Query: 411  SPRDSSVEYVGTSYSGEAMAPQFCHYAVGVLNKKTQTLKIVPIAANKIFRLEPRVGGSDV 590
            +P  SS+++VGTSY GEA   Q C YA+GVL+K +  L IVPIAANKIFRLEP+V  SD+
Sbjct: 95   TPSGSSLDFVGTSYLGEAETRQACKYALGVLDKDSGKLTIVPIAANKIFRLEPKVRNSDL 154

Query: 591  ADKE--AGNEEVSAEVQANMKAMLDTRYGTKKSLRQSKKMNALNKENDPETQKDLALKMK 764
            AD+E  + NEE+S E  A+ K  L+  YGTKKS++ +KK+  LNKE+DP TQK L  ++K
Sbjct: 155  ADEEPQSKNEELSPEKNASRKRELNNLYGTKKSIKAAKKLYDLNKEDDPYTQKVLDSQIK 214

Query: 765  SVKINKEALESSTSDTVLNVPPFDVNATAPQQAYPLDKIILKGEWDFLQDIFKLLSVGLE 944
            +V  N+EALES+ +D   N+PP+D +AT PQ+AYPL+KII+ GEW+FL+DI+ LL  G E
Sbjct: 215  NVPGNEEALESTIADIARNIPPYDSSATTPQEAYPLNKIIIHGEWNFLEDIYYLLQAGEE 274

Query: 945  VTNNACPSFVCNRIHKLRESQDDVEKQTLASIFLYITHLVKFKDQHSMDGRASAKNHRIP 1124
            V+ NA P+FVCNRIHKL++ Q + E++ LASI  YITHL+KFKDQHSM+G +SAK+HRIP
Sbjct: 275  VSTNAYPTFVCNRIHKLQQIQVEAEQRMLASILSYITHLIKFKDQHSMEGASSAKSHRIP 334

Query: 1125 NILYQKFMTMFFDAESKRLSDDKIHLLISYVLVLVLHADDFRTNPTDIANDLRMSEVKLR 1304
            +IL+QKFM+ F + +SKRLS DKI+LL+ YVLVL LHAD+F+T P DIA DLR+S V+LR
Sbjct: 335  SILHQKFMSRFGNPDSKRLSVDKINLLMGYVLVLTLHADEFQTTPDDIAKDLRISVVQLR 394

Query: 1305 DHFEKLGCKLSREKNMLYATLPVPLQFPKAKQRRRR 1412
             HFE LGCKL RE N   ATLPVPL+FP +  RRRR
Sbjct: 395  SHFENLGCKLRRENNRFVATLPVPLKFPDSNSRRRR 430


>XP_010062676.1 PREDICTED: DNA-directed RNA polymerase I subunit rpa49 [Eucalyptus
            grandis] KCW69807.1 hypothetical protein EUGRSUZ_F03167
            [Eucalyptus grandis]
          Length = 415

 Score =  444 bits (1142), Expect = e-150
 Identities = 231/405 (57%), Positives = 300/405 (74%), Gaps = 10/405 (2%)
 Frame = +3

Query: 228  RVKAKVQFIPDQPNKTPPLVGYFPSMYNPNE-------DPDDEKRPRVRVYRNMNEKKNR 386
            ++ A +  +PD  +K PPLVGYFPS ++P+        DP +E  P VRVYRN       
Sbjct: 18   KLSATIHALPDSADKIPPLVGYFPSGFDPSSGGGGGGGDPPEE--PGVRVYRN----GKW 71

Query: 387  TGRMELVVSPRDSSVEYVGTSYSGEAMAPQFCHYAVGVLNKKTQTLKIVPIAANKIFRLE 566
              R++LVV P +S+V +VG+S SGE    Q C YA+GVL+K++QTLK+VPIA NKIFRLE
Sbjct: 72   PNRLQLVVRPPESNVTFVGSSSSGEYTGVQSCTYALGVLDKESQTLKVVPIACNKIFRLE 131

Query: 567  PRVGGSDVADKEA---GNEEVSAEVQANMKAMLDTRYGTKKSLRQSKKMNALNKENDPET 737
            PRV  SD+ ++E    G  E+SA+ +A+    L+  +GTK+S+ Q KKM +L +E+DP +
Sbjct: 132  PRVA-SDLPEEEPPELGRGEISAKEKADKVRELNLLFGTKRSVTQDKKMQSLRQEDDPNS 190

Query: 738  QKDLALKMKSVKINKEALESSTSDTVLNVPPFDVNATAPQQAYPLDKIILKGEWDFLQDI 917
            QKDL  K+K V INKEALES+ +    N+PP++ +AT P+ AYPL+KIILKGEWD+++DI
Sbjct: 191  QKDLDRKIKEVAINKEALESTDAHIARNIPPYNSSATVPKDAYPLEKIILKGEWDYIKDI 250

Query: 918  FKLLSVGLEVTNNACPSFVCNRIHKLRESQDDVEKQTLASIFLYITHLVKFKDQHSMDGR 1097
            F+ L  G +V+ +A P+FVCNRIHKL E QD++EK+TL  I  YI HL+KFKDQHS DG 
Sbjct: 251  FQFLEEGQKVSPDAYPTFVCNRIHKLGEMQDEMEKETLGCILSYINHLIKFKDQHSADGA 310

Query: 1098 ASAKNHRIPNILYQKFMTMFFDAESKRLSDDKIHLLISYVLVLVLHADDFRTNPTDIAND 1277
            +S+KNH+IP+IL QKF TMF +AESK L  +KI LLISYVLVL L ADDFRT+PTDIA D
Sbjct: 311  SSSKNHKIPSILRQKFSTMFSNAESKWLPSEKIDLLISYVLVLTLFADDFRTDPTDIAKD 370

Query: 1278 LRMSEVKLRDHFEKLGCKLSREKNMLYATLPVPLQFPKAKQRRRR 1412
            LRMS V +R HFE LGCK SREKN+LYA LPVPL+FP+ ++RRRR
Sbjct: 371  LRMSSVTIRQHFEHLGCKFSREKNVLYAKLPVPLKFPELRRRRRR 415


>XP_002278228.1 PREDICTED: DNA-directed RNA polymerase I subunit rpa49 [Vitis
            vinifera]
          Length = 421

 Score =  443 bits (1139), Expect = e-149
 Identities = 232/400 (58%), Positives = 299/400 (74%), Gaps = 6/400 (1%)
 Frame = +3

Query: 231  VKAKVQFIPDQPNKTPPLVGYFPSMYNPNEDPDDEKRP--RVRVYRNMNEKKNRTGRMEL 404
            V  K++ + + P K PPLVGYFPS ++P++  D E  P   V+V+RN    K R  R++L
Sbjct: 27   VNVKMEVVHEHPEKIPPLVGYFPSGFDPHKPQDHESDPPPAVKVFRN----KARANRLQL 82

Query: 405  VVSPRDSSVEYVGTSYSGEAMAPQFCHYAVGVLNKKTQTLKIVPIAANKIFRLEPRVGGS 584
            VVSP DS V +VGTSYSGEA + Q C YA+GVL+K+TQTLKIVPIA+NKIFRLEPRVGGS
Sbjct: 83   VVSPNDSKVNFVGTSYSGEAASAQVCTYALGVLDKETQTLKIVPIASNKIFRLEPRVGGS 142

Query: 585  DVADKEAGN---EEVSAEVQANMKAMLDTRYGTKKSLRQSKKMNALNKENDPETQKDLAL 755
            D +  E  +    E +AE +A     L   YGTKKS+ Q+KK+ ALN+++DP +QKDL  
Sbjct: 143  DASVDEPSSLLKGEQTAEEKAGRMRDLTNLYGTKKSITQAKKLQALNQKDDPRSQKDLDR 202

Query: 756  KMKSVKINKEALESSTSDTVLNVPPFDVNATAPQQAYPLDKIILKGEWDFLQDIFKLLSV 935
            K+K V INKEALES+++ +  N+PP+D  AT PQ+AY LDKII KGEWD+L DI  LL  
Sbjct: 203  KLKEVVINKEALESTSAHSARNIPPYDDTATTPQEAYRLDKIIFKGEWDYLLDILDLLQA 262

Query: 936  GLEVTNNACPSFVCNRIHKLRESQDDVEKQTLASIFLYITHLVKFKDQHSMDGRASAKNH 1115
            G+EV ++A  SFVCNRI KL+E +D+ EK TLA IF YI HL+K+KD++SMD  +SAK+H
Sbjct: 263  GVEVESSAYSSFVCNRIQKLKELEDEGEKTTLACIFSYINHLLKYKDRNSMDA-SSAKHH 321

Query: 1116 RIPNILYQKFMTMF-FDAESKRLSDDKIHLLISYVLVLVLHADDFRTNPTDIANDLRMSE 1292
            +IP IL QKF +MF  D++S+RL+++K  LLISYVLVL L+AD+FRT+P+DIA DLRMS 
Sbjct: 322  KIPGILNQKFSSMFALDSDSRRLTEEKKDLLISYVLVLTLYADEFRTDPSDIARDLRMSA 381

Query: 1293 VKLRDHFEKLGCKLSREKNMLYATLPVPLQFPKAKQRRRR 1412
            VKLR HFE LGCKL  +  +  ATLPVPL FP+ +Q+RRR
Sbjct: 382  VKLRAHFEHLGCKLVSQNKVTMATLPVPLTFPRLRQKRRR 421


>CBI35920.3 unnamed protein product, partial [Vitis vinifera]
          Length = 391

 Score =  439 bits (1130), Expect = e-148
 Identities = 230/396 (58%), Positives = 297/396 (75%), Gaps = 6/396 (1%)
 Frame = +3

Query: 243  VQFIPDQPNKTPPLVGYFPSMYNPNEDPDDEKRP--RVRVYRNMNEKKNRTGRMELVVSP 416
            ++ + + P K PPLVGYFPS ++P++  D E  P   V+V+RN    K R  R++LVVSP
Sbjct: 1    MEVVHEHPEKIPPLVGYFPSGFDPHKPQDHESDPPPAVKVFRN----KARANRLQLVVSP 56

Query: 417  RDSSVEYVGTSYSGEAMAPQFCHYAVGVLNKKTQTLKIVPIAANKIFRLEPRVGGSDVAD 596
             DS V +VGTSYSGEA + Q C YA+GVL+K+TQTLKIVPIA+NKIFRLEPRVGGSD + 
Sbjct: 57   NDSKVNFVGTSYSGEAASAQVCTYALGVLDKETQTLKIVPIASNKIFRLEPRVGGSDASV 116

Query: 597  KEAGN---EEVSAEVQANMKAMLDTRYGTKKSLRQSKKMNALNKENDPETQKDLALKMKS 767
             E  +    E +AE +A     L   YGTKKS+ Q+KK+ ALN+++DP +QKDL  K+K 
Sbjct: 117  DEPSSLLKGEQTAEEKAGRMRDLTNLYGTKKSITQAKKLQALNQKDDPRSQKDLDRKLKE 176

Query: 768  VKINKEALESSTSDTVLNVPPFDVNATAPQQAYPLDKIILKGEWDFLQDIFKLLSVGLEV 947
            V INKEALES+++ +  N+PP+D  AT PQ+AY LDKII KGEWD+L DI  LL  G+EV
Sbjct: 177  VVINKEALESTSAHSARNIPPYDDTATTPQEAYRLDKIIFKGEWDYLLDILDLLQAGVEV 236

Query: 948  TNNACPSFVCNRIHKLRESQDDVEKQTLASIFLYITHLVKFKDQHSMDGRASAKNHRIPN 1127
             ++A  SFVCNRI KL+E +D+ EK TLA IF YI HL+K+KD++SMD  +SAK+H+IP 
Sbjct: 237  ESSAYSSFVCNRIQKLKELEDEGEKTTLACIFSYINHLLKYKDRNSMDA-SSAKHHKIPG 295

Query: 1128 ILYQKFMTMF-FDAESKRLSDDKIHLLISYVLVLVLHADDFRTNPTDIANDLRMSEVKLR 1304
            IL QKF +MF  D++S+RL+++K  LLISYVLVL L+AD+FRT+P+DIA DLRMS VKLR
Sbjct: 296  ILNQKFSSMFALDSDSRRLTEEKKDLLISYVLVLTLYADEFRTDPSDIARDLRMSAVKLR 355

Query: 1305 DHFEKLGCKLSREKNMLYATLPVPLQFPKAKQRRRR 1412
             HFE LGCKL  +  +  ATLPVPL FP+ +Q+RRR
Sbjct: 356  AHFEHLGCKLVSQNKVTMATLPVPLTFPRLRQKRRR 391


>XP_006369274.1 hypothetical protein POPTR_0001s20580g [Populus trichocarpa]
            ERP65843.1 hypothetical protein POPTR_0001s20580g
            [Populus trichocarpa]
          Length = 472

 Score =  440 bits (1131), Expect = e-147
 Identities = 231/419 (55%), Positives = 300/419 (71%), Gaps = 25/419 (5%)
 Frame = +3

Query: 228  RVKAKVQFIPDQPNKTPPLVGYFPSMYNPNE--DPDDEKRP--------RVRVYRNM--- 368
            R+  K++ + +Q +KTPP+VGYFPS YNP++  D +D + P         V++YRN    
Sbjct: 53   RLDVKLELVNNQVDKTPPVVGYFPSGYNPHKTNDINDAQEPILPLAAPPSVKLYRNAQRA 112

Query: 369  ---------NEKKNRTGRMELVVSPRDSSVEYVGTSYSGEAMAPQFCHYAVGVLNKKTQT 521
                     NEK   + R+ELVVSP  S+VE+VG SY GEAMA Q C YA+GVL+K TQT
Sbjct: 113  KVEKSSGEKNEKGRTSERLELVVSPNGSNVEFVGNSYKGEAMAAQLCTYALGVLDKATQT 172

Query: 522  LKIVPIAANKIFRLEPRVGGSDVADKEAGN---EEVSAEVQANMKAMLDTRYGTKKSLRQ 692
            LKI+PIA NKI RLEP++ GS  ADKE  N    E++AE +A     L+ +YG KKS+ Q
Sbjct: 173  LKIMPIAGNKILRLEPKLRGSLAADKEHANFENGEITAEQRAARIRQLNVQYGPKKSIIQ 232

Query: 693  SKKMNALNKENDPETQKDLALKMKSVKINKEALESSTSDTVLNVPPFDVNATAPQQAYPL 872
             KKM AL K +DP +QKDL  K+++  INK+ALES++  +  N+PP++ +A  PQ+AYPL
Sbjct: 233  DKKMQALRKGDDPLSQKDLGRKIENAPINKDALESTSGHSARNIPPYNSSAITPQEAYPL 292

Query: 873  DKIILKGEWDFLQDIFKLLSVGLEVTNNACPSFVCNRIHKLRESQDDVEKQTLASIFLYI 1052
            D IIL GEWDFL+DI+K+L VG EV +NA P+FVCNRI KLRE QD+VEK+ L+ IF YI
Sbjct: 293  DGIILTGEWDFLEDIYKILQVGGEVASNAYPTFVCNRIQKLREIQDEVEKKRLSCIFSYI 352

Query: 1053 THLVKFKDQHSMDGRASAKNHRIPNILYQKFMTMFFDAESKRLSDDKIHLLISYVLVLVL 1232
            THL+KFKDQHSMDG ASA+NH+ P+I+ QKF  M F  E++RLS DKI LLISYVLVL L
Sbjct: 353  THLLKFKDQHSMDGAASARNHQFPSIIRQKFFEM-FKPETRRLSVDKIDLLISYVLVLTL 411

Query: 1233 HADDFRTNPTDIANDLRMSEVKLRDHFEKLGCKLSREKNMLYATLPVPLQFPKAKQRRR 1409
            +ADDFRT P D++NDLRM+   ++ H+  LGCK+ REKN    TL VPL+FP+ K++ R
Sbjct: 412  YADDFRTFPADVSNDLRMNPATVKSHYRNLGCKMEREKNKYLVTLSVPLEFPQPKRKFR 470


>XP_011014273.1 PREDICTED: DNA-directed RNA polymerase I subunit rpa49-like [Populus
            euphratica]
          Length = 472

 Score =  436 bits (1120), Expect = e-145
 Identities = 225/420 (53%), Positives = 301/420 (71%), Gaps = 25/420 (5%)
 Frame = +3

Query: 228  RVKAKVQFIPDQPNKTPPLVGYFPSMYNPNE--DPDDEKRPR--------VRVYRNM--- 368
            R+  K++ + +  +KTPP+VGYFPS YNP++  D +D + P         V++YRN    
Sbjct: 53   RLDVKLELVNNHVDKTPPVVGYFPSGYNPHKTNDINDAQEPNLPLAAPPSVKLYRNAQRA 112

Query: 369  ---------NEKKNRTGRMELVVSPRDSSVEYVGTSYSGEAMAPQFCHYAVGVLNKKTQT 521
                     NEK   + R+ELVVSP  S++E+VG SY GEAMA Q C YA+GVL+K TQT
Sbjct: 113  KVEKSSGEKNEKGRTSERLELVVSPNGSNIEFVGNSYKGEAMAAQLCTYALGVLDKTTQT 172

Query: 522  LKIVPIAANKIFRLEPRVGGSDVADKEAGN---EEVSAEVQANMKAMLDTRYGTKKSLRQ 692
            LKI+PIA NKI RLEP++ GS  ADKE  N    E++AE +A     L+ +YG KKS+ Q
Sbjct: 173  LKIMPIAGNKILRLEPKLRGSLAADKEHANFENGEITAEQRAARIRQLNVQYGPKKSIIQ 232

Query: 693  SKKMNALNKENDPETQKDLALKMKSVKINKEALESSTSDTVLNVPPFDVNATAPQQAYPL 872
             KKM AL K +DP +QKDL  K+++  INK+ALES++  +  N+PP++ +A  PQ+AYPL
Sbjct: 233  DKKMQALRKGDDPLSQKDLGRKIENAPINKDALESTSGHSARNIPPYNSSAITPQEAYPL 292

Query: 873  DKIILKGEWDFLQDIFKLLSVGLEVTNNACPSFVCNRIHKLRESQDDVEKQTLASIFLYI 1052
            D IIL GEWDFL+DI+K+L  G EV +NA P+FVCNRI KLRE QD++EK+ L+ IF YI
Sbjct: 293  DGIILTGEWDFLEDIYKILQAGGEVASNAYPTFVCNRIQKLREIQDEMEKKRLSCIFSYI 352

Query: 1053 THLVKFKDQHSMDGRASAKNHRIPNILYQKFMTMFFDAESKRLSDDKIHLLISYVLVLVL 1232
            THL+KFKDQHS+DG ASA+NH+ P+I+ QKF+ M F+ E++RLS +KI LLISYVLVL L
Sbjct: 353  THLIKFKDQHSLDGAASARNHQFPSIIRQKFLEM-FNPETRRLSVEKIDLLISYVLVLTL 411

Query: 1233 HADDFRTNPTDIANDLRMSEVKLRDHFEKLGCKLSREKNMLYATLPVPLQFPKAKQRRRR 1412
            +ADDFRT P D++NDLRM+   ++ H+  LGCK+ REKN    TL VPL+FP+ K++ R+
Sbjct: 412  YADDFRTFPADVSNDLRMNPATVKSHYRNLGCKMEREKNKYLVTLSVPLEFPQPKRKFRK 471


>XP_011007736.1 PREDICTED: DNA-directed RNA polymerase I subunit rpa49-like [Populus
            euphratica]
          Length = 472

 Score =  435 bits (1118), Expect = e-145
 Identities = 224/420 (53%), Positives = 301/420 (71%), Gaps = 25/420 (5%)
 Frame = +3

Query: 228  RVKAKVQFIPDQPNKTPPLVGYFPSMYNPNE--DPDDEKRPR--------VRVYRNM--- 368
            R+  K++ + +  +KTPP+VGYFPS YNP++  D +D + P         V++YRN    
Sbjct: 53   RLDVKLELVNNHVDKTPPVVGYFPSGYNPHKTNDINDAQEPNLPLAAPPSVKLYRNAQRA 112

Query: 369  ---------NEKKNRTGRMELVVSPRDSSVEYVGTSYSGEAMAPQFCHYAVGVLNKKTQT 521
                     NEK   + R+ELVVSP  S++E+VG SY GEAMA Q C YA+GVL+K TQT
Sbjct: 113  KVEKSSGEKNEKGRTSERLELVVSPNGSNIEFVGNSYKGEAMAAQLCTYALGVLDKTTQT 172

Query: 522  LKIVPIAANKIFRLEPRVGGSDVADKEAGN---EEVSAEVQANMKAMLDTRYGTKKSLRQ 692
            LKI+PIA NKI RLEP++ GS  ADKE  N    E++AE +A     L+ +YG KKS+ Q
Sbjct: 173  LKIMPIAGNKILRLEPKLRGSLAADKEHANFENGEITAEQRAARIRQLNVQYGPKKSIIQ 232

Query: 693  SKKMNALNKENDPETQKDLALKMKSVKINKEALESSTSDTVLNVPPFDVNATAPQQAYPL 872
             KKM AL K +DP +QKDL  K+++  INK+ALES++  +  N+PP++ +A  PQ+AYPL
Sbjct: 233  DKKMQALRKGDDPLSQKDLGRKIENAPINKDALESTSGHSARNIPPYNSSAITPQEAYPL 292

Query: 873  DKIILKGEWDFLQDIFKLLSVGLEVTNNACPSFVCNRIHKLRESQDDVEKQTLASIFLYI 1052
            D IIL GEWDFL+D++K+L  G EV +NA P+FVCNRI KLRE QD++EK+ L+ IF YI
Sbjct: 293  DGIILTGEWDFLEDLYKILQAGGEVASNAYPTFVCNRIQKLREIQDEMEKKRLSCIFSYI 352

Query: 1053 THLVKFKDQHSMDGRASAKNHRIPNILYQKFMTMFFDAESKRLSDDKIHLLISYVLVLVL 1232
            THL+KFKDQHS+DG ASA+NH+ P+I+ QKF+ M F+ E++RLS +KI LLISYVLVL L
Sbjct: 353  THLIKFKDQHSLDGAASARNHQFPSIIRQKFLEM-FNPETRRLSVEKIDLLISYVLVLTL 411

Query: 1233 HADDFRTNPTDIANDLRMSEVKLRDHFEKLGCKLSREKNMLYATLPVPLQFPKAKQRRRR 1412
            +ADDFRT P D++NDLRM+   ++ H+  LGCK+ REKN    TL VPL+FP+ K++ R+
Sbjct: 412  YADDFRTFPADVSNDLRMNPATVKSHYRNLGCKMEREKNKYLVTLSVPLEFPQPKRKFRK 471


>XP_007039490.2 PREDICTED: DNA-directed RNA polymerase I subunit rpa49 [Theobroma
            cacao]
          Length = 457

 Score =  431 bits (1107), Expect = e-144
 Identities = 222/414 (53%), Positives = 294/414 (71%), Gaps = 21/414 (5%)
 Frame = +3

Query: 234  KAKVQFIPDQPNKTPPLVGYFPSMYNP-----------------NEDPDDEK-RPRVRVY 359
            + K+Q   DQPNK PPLV YFPS YNP                  E PD++  +PRV+VY
Sbjct: 44   QVKIQLFQDQPNKIPPLVAYFPSGYNPCKTDPQTRQEEEEEEEEEEGPDNKSNQPRVKVY 103

Query: 360  RNMNEKKNRTGRMELVVSPRDSSVEYVGTSYSGEAMAPQFCHYAVGVLNKKTQTLKIVPI 539
            RNM ++K  T R+++VVSP  S+V++VG++YSGEA A Q C Y++GVL+++T+TLKI+PI
Sbjct: 104  RNMAQRK--TNRLQVVVSPSGSNVDFVGSNYSGEAAAAQVCKYSLGVLDRETRTLKIIPI 161

Query: 540  AANKIFRLEPRVGGSDVADKEAGNE---EVSAEVQANMKAMLDTRYGTKKSLRQSKKMNA 710
            A+NKIFRLEPRV  S+ A+K+  +    E++ E + +    L   YGTKK  ++ K +N 
Sbjct: 162  ASNKIFRLEPRVRSSETANKDVSSSVKSELTTEDKEDKMGELTALYGTKKDRKKRKDLNN 221

Query: 711  LNKENDPETQKDLALKMKSVKINKEALESSTSDTVLNVPPFDVNATAPQQAYPLDKIILK 890
            L KE DPE+QK L  K++ V  NKEAL ++++    N+PP D +AT P +AYPLDKIILK
Sbjct: 222  LKKEVDPESQKSLDEKIEQVAFNKEALGNTSALVARNIPPHDCSATTPVEAYPLDKIILK 281

Query: 891  GEWDFLQDIFKLLSVGLEVTNNACPSFVCNRIHKLRESQDDVEKQTLASIFLYITHLVKF 1070
            G+W+FL DI+ LL VG EV +NA P+FVCNRI+KL   QD+ EK+ L+ +F +ITHLVKF
Sbjct: 282  GDWEFLGDIYGLLEVGAEVASNAYPTFVCNRINKLEGIQDETEKRKLSCVFSFITHLVKF 341

Query: 1071 KDQHSMDGRASAKNHRIPNILYQKFMTMFFDAESKRLSDDKIHLLISYVLVLVLHADDFR 1250
             DQ SMD  ASAK H+IP+I+ Q+F TMF D   ++ S D+I+LLISYVLVL LHAD FR
Sbjct: 342  NDQFSMDRVASAKGHKIPSIIRQRFFTMFTDPGLRKPSRDQINLLISYVLVLTLHADGFR 401

Query: 1251 TNPTDIANDLRMSEVKLRDHFEKLGCKLSREKNMLYATLPVPLQFPKAKQRRRR 1412
            T+P+DIA DLRMS + LR HFE LGCKL RE N ++ TLPVPL+FP    +R+R
Sbjct: 402  TDPSDIAKDLRMSSIGLRPHFENLGCKLVRENNSIFTTLPVPLKFPSENLKRQR 455


>EOY23991.1 DNA-directed RNA polymerase I subunit rpa49, putative [Theobroma
            cacao]
          Length = 457

 Score =  430 bits (1106), Expect = e-143
 Identities = 222/414 (53%), Positives = 294/414 (71%), Gaps = 21/414 (5%)
 Frame = +3

Query: 234  KAKVQFIPDQPNKTPPLVGYFPSMYNP-----------------NEDPDDEK-RPRVRVY 359
            + K+Q   DQPNK PPLV YFPS YNP                  E PD++  +PRV+VY
Sbjct: 44   QVKIQLFQDQPNKIPPLVAYFPSGYNPCKTDPQTRQGEEEEEEEEEGPDNKSNQPRVKVY 103

Query: 360  RNMNEKKNRTGRMELVVSPRDSSVEYVGTSYSGEAMAPQFCHYAVGVLNKKTQTLKIVPI 539
            RNM ++K  T R+++VVSP  S+V++VG++YSGEA A Q C Y++GVL+++T+TLKI+PI
Sbjct: 104  RNMAQRK--TNRLQVVVSPSGSNVDFVGSNYSGEAAAAQVCRYSLGVLDRETRTLKIIPI 161

Query: 540  AANKIFRLEPRVGGSDVADKEAGNE---EVSAEVQANMKAMLDTRYGTKKSLRQSKKMNA 710
            A+NKIFRLEPRV  S+ A+K+  +    E++ E + +    L   YGTKK  ++ K +N 
Sbjct: 162  ASNKIFRLEPRVRSSETANKDVSSSVKSELTTEDKEDKMGELTALYGTKKDRKKRKDLNN 221

Query: 711  LNKENDPETQKDLALKMKSVKINKEALESSTSDTVLNVPPFDVNATAPQQAYPLDKIILK 890
            L KE DPE+QK L  K++ V  NKEAL ++++    N+PP D +AT P +AYPLDKIILK
Sbjct: 222  LKKEVDPESQKSLDEKIEQVAFNKEALGNTSALVARNIPPHDSSATTPVEAYPLDKIILK 281

Query: 891  GEWDFLQDIFKLLSVGLEVTNNACPSFVCNRIHKLRESQDDVEKQTLASIFLYITHLVKF 1070
            G+W+FL DI+ LL VG EV +NA P+FVCNRI+KL   QD+ EK+ L+ +F +ITHLVKF
Sbjct: 282  GDWEFLGDIYGLLEVGAEVASNAYPTFVCNRINKLEGIQDETEKRKLSCVFSFITHLVKF 341

Query: 1071 KDQHSMDGRASAKNHRIPNILYQKFMTMFFDAESKRLSDDKIHLLISYVLVLVLHADDFR 1250
             DQ SMD  ASAK H+IP+I+ Q+F TMF D   ++ S D+I+LLISYVLVL LHAD FR
Sbjct: 342  NDQFSMDRVASAKGHKIPSIIRQRFFTMFTDPGLRKPSRDQINLLISYVLVLTLHADGFR 401

Query: 1251 TNPTDIANDLRMSEVKLRDHFEKLGCKLSREKNMLYATLPVPLQFPKAKQRRRR 1412
            T+P+DIA DLRMS + LR HFE LGCKL RE N ++ TLPVPL+FP    +R+R
Sbjct: 402  TDPSDIAKDLRMSSIGLRPHFENLGCKLVRENNSIFTTLPVPLKFPSETLKRQR 455


>OAY53180.1 hypothetical protein MANES_04G142200 [Manihot esculenta]
          Length = 500

 Score =  431 bits (1109), Expect = e-143
 Identities = 230/419 (54%), Positives = 299/419 (71%), Gaps = 25/419 (5%)
 Frame = +3

Query: 231  VKAKVQFIPDQPNKTPPLVGYFPSMYNP---NEDPDDEKR-------PRVRVYRNM---- 368
            V  K + I D  +KTPP+VGYFPS Y P   N   ++E+        P V  YR+     
Sbjct: 83   VCVKFEVIYDHSDKTPPIVGYFPSGYKPHNYNGYNNNEENLSPPPHPPTVSFYRSAQRIK 142

Query: 369  --------NEKKNRTGRMELVVSPRDSSVEYVGTSYSGEAMAPQFCHYAVGVLNKKTQTL 524
                    N+K++ + RMELVVSP  S+V +VG +Y GEAMA Q C YA+GVL+K TQTL
Sbjct: 143  IEKSFSEKNDKRSSSERMELVVSPDGSNVNFVGKNYKGEAMAAQLCTYALGVLDKNTQTL 202

Query: 525  KIVPIAANKIFRLEPRVGGSDVADKEAG---NEEVSAEVQANMKAMLDTRYGTKKSLRQS 695
            KI+PIA NKIFRLEP+V G D ADKE     NEE S E +A+    L+ +YG+K+S+ Q 
Sbjct: 203  KIMPIAGNKIFRLEPKVRGLDTADKEPSCMENEEASEENKADKIMALNVKYGSKRSIVQY 262

Query: 696  KKMNALNKENDPETQKDLALKMKSVKINKEALESSTSDTVLNVPPFDVNATAPQQAYPLD 875
            KK  AL + +DPE+QKDL+ K+ ++ +NKEALES+++    N+PP + +AT PQ+AYPL+
Sbjct: 263  KKAQALKQGDDPESQKDLSKKIDNIVVNKEALESASTHIARNIPPHNSSATTPQEAYPLN 322

Query: 876  KIILKGEWDFLQDIFKLLSVGLEVTNNACPSFVCNRIHKLRESQDDVEKQTLASIFLYIT 1055
            +IIL GE DFL+D++++L VG E  +NA P+FV NRIHKL E QD+ EK+TL+ IF YIT
Sbjct: 323  RIILTGERDFLEDVYEILQVGTEARSNAYPTFVRNRIHKLLEIQDEAEKKTLSRIFSYIT 382

Query: 1056 HLVKFKDQHSMDGRASAKNHRIPNILYQKFMTMFFDAESKRLSDDKIHLLISYVLVLVLH 1235
            HL+KFKD HS+DG +SAK+H+IP+IL QKF+ M F  ES+RL  +KI LLISY+LVL LH
Sbjct: 383  HLIKFKDLHSLDGASSAKSHKIPSILRQKFVEM-FTPESRRLPVEKIDLLISYILVLTLH 441

Query: 1236 ADDFRTNPTDIANDLRMSEVKLRDHFEKLGCKLSREKNMLYATLPVPLQFPKAKQRRRR 1412
            ADDFRTNPTDIA DL++S V LR HF  LGCKL RE  +  ATLPVPL+FP  +Q++RR
Sbjct: 442  ADDFRTNPTDIAKDLKVSSVSLRVHFANLGCKLVRENKLSLATLPVPLKFPTQRQKQRR 500


>XP_010273794.1 PREDICTED: DNA-directed RNA polymerase I subunit rpa49 [Nelumbo
            nucifera]
          Length = 406

 Score =  425 bits (1093), Expect = e-142
 Identities = 221/399 (55%), Positives = 288/399 (72%), Gaps = 4/399 (1%)
 Frame = +3

Query: 228  RVKAKVQFIPDQPNKTPPLVGYFPSMYNPNEDPDDEKRPRVRVYRNMNEKKNRTGRMELV 407
            R+  K++     P+K PPLVGYFPS +NP    ++E   +VRVY N    KNR  R++LV
Sbjct: 12   RLDVKMEIFHQHPDKIPPLVGYFPSGFNPKRS-EEEDSTKVRVYSN----KNRPNRLQLV 66

Query: 408  VSPRDSSVEYVGTSYSGEAMAPQFCHYAVGVLNKKTQTLKIVPIAANKIFRLEPRVGGSD 587
            VSP  S VE+VGTSYS EA A Q C YA+GVL+K+TQTLKIVPIA+NKIFRLEPRV GS+
Sbjct: 67   VSPNSSKVEFVGTSYSSEAAAAQVCTYALGVLDKETQTLKIVPIASNKIFRLEPRVRGSE 126

Query: 588  VADKEAGNE----EVSAEVQANMKAMLDTRYGTKKSLRQSKKMNALNKENDPETQKDLAL 755
            V+DKE   E    +++AE +A+    L   YGTKKS+ ++KKM +L ++ DP +Q  +  
Sbjct: 127  VSDKEPRGELQEEDLTAEQKADKIRDLTNLYGTKKSISRAKKMESLKQKEDPISQDAVDK 186

Query: 756  KMKSVKINKEALESSTSDTVLNVPPFDVNATAPQQAYPLDKIILKGEWDFLQDIFKLLSV 935
            K++   INK+ALE++   T  NVPP D  AT P +AYPL+KII KGEWD+L D+ +LL  
Sbjct: 187  KIEGFVINKDALETAAVYTARNVPPHDPTATTPDKAYPLNKIIFKGEWDYLLDVLELLQS 246

Query: 936  GLEVTNNACPSFVCNRIHKLRESQDDVEKQTLASIFLYITHLVKFKDQHSMDGRASAKNH 1115
            G  ++++A PSFVCNRI+KL E QD++EK+ LA I  YITHL+KFKDQ S+DG +SAK H
Sbjct: 247  GATISSDAYPSFVCNRIYKLEEIQDEMEKKRLACILSYITHLIKFKDQRSVDGASSAKYH 306

Query: 1116 RIPNILYQKFMTMFFDAESKRLSDDKIHLLISYVLVLVLHADDFRTNPTDIANDLRMSEV 1295
            + P I+ QKF+T+F ++E+ RL+DDK  LLISYVLVL L  D F T+ +DIA DLRM+ V
Sbjct: 307  KFPPIILQKFLTLFANSETYRLADDKQDLLISYVLVLTLFIDKFSTDMSDIAKDLRMTPV 366

Query: 1296 KLRDHFEKLGCKLSREKNMLYATLPVPLQFPKAKQRRRR 1412
             LR H++ LGCKLSR   +L  TLPVPLQFPK + +RRR
Sbjct: 367  SLRLHYQNLGCKLSRVDKLLMVTLPVPLQFPKPRTQRRR 405


>XP_004141689.1 PREDICTED: DNA-directed RNA polymerase I subunit rpa49 [Cucumis
            sativus] KGN45511.1 hypothetical protein Csa_7G450680
            [Cucumis sativus]
          Length = 435

 Score =  424 bits (1091), Expect = e-142
 Identities = 221/398 (55%), Positives = 297/398 (74%), Gaps = 6/398 (1%)
 Frame = +3

Query: 237  AKVQFIPDQPNKTPPLVGYFPSMYNPNEDPDDE--KRPRVRVYRNMNEKKNRTGRMELVV 410
            AK+Q + +QP KTPP+VGYFPS ++P++D D E  +  R RVY++    KNR  RM+LVV
Sbjct: 43   AKIQVLSNQPQKTPPVVGYFPSGFDPHKDADKEQSRSVRARVYKH----KNRPNRMQLVV 98

Query: 411  SPRDSSVEYVGTSYSGEAMA-PQFCHYAVGVLNKKTQTLKIVPIAANKIFRLEPRVGGSD 587
            SP  S+V++VGT+Y GEA A  Q C YA+GVL+K TQ+LKIVPIA+N IFRL+P+V GSD
Sbjct: 99   SPTGSNVDFVGTNYLGEATAGKQHCTYALGVLDKATQSLKIVPIASNMIFRLDPKVRGSD 158

Query: 588  VADKEA---GNEEVSAEVQANMKAMLDTRYGTKKSLRQSKKMNALNKENDPETQKDLALK 758
            V + E+    NEE+S + +AN    L   YGTKKS +Q++K++AL +E+DPET+ DL  +
Sbjct: 159  VTENESPSVANEELSGQDKANRMRELTALYGTKKSKKQAQKLHALKQEDDPETKSDLDGR 218

Query: 759  MKSVKINKEALESSTSDTVLNVPPFDVNATAPQQAYPLDKIILKGEWDFLQDIFKLLSVG 938
            MK+V +NKEALE + ++   N+P ++ +AT PQ+AYPLDKIILKGEW FL+D++  L   
Sbjct: 219  MKNVVVNKEALEGTQAEVARNIPAYNASATTPQEAYPLDKIILKGEWSFLEDLYFRLQET 278

Query: 939  LEVTNNACPSFVCNRIHKLRESQDDVEKQTLASIFLYITHLVKFKDQHSMDGRASAKNHR 1118
             E++    PSFV NRI+KL++ QD+ EK+ L  IF YITHL+K+KDQHSM   +SAK H+
Sbjct: 279  AEISATY-PSFVRNRIYKLQDIQDEEEKKKLCCIFSYITHLIKYKDQHSMGDVSSAKGHK 337

Query: 1119 IPNILYQKFMTMFFDAESKRLSDDKIHLLISYVLVLVLHADDFRTNPTDIANDLRMSEVK 1298
            IP++L QKF +MF  AES+RLS DKI+LLIS+VLVL L AD+F ++P DIA DLR S   
Sbjct: 338  IPSMLRQKFSSMFPTAESRRLSADKINLLISHVLVLSLFADEFSSDPADIAKDLRTSPYD 397

Query: 1299 LRDHFEKLGCKLSREKNMLYATLPVPLQFPKAKQRRRR 1412
            LR HF+ LGCK  R+ N+  ATLP+PLQFP+ +Q+RRR
Sbjct: 398  LRLHFDNLGCKFIRKNNLSLATLPIPLQFPELRQKRRR 435


>XP_015902884.1 PREDICTED: DNA-directed RNA polymerase I subunit rpa49 isoform X1
            [Ziziphus jujuba] XP_015902891.1 PREDICTED: DNA-directed
            RNA polymerase I subunit rpa49 isoform X2 [Ziziphus
            jujuba]
          Length = 439

 Score =  423 bits (1087), Expect = e-141
 Identities = 217/401 (54%), Positives = 299/401 (74%), Gaps = 7/401 (1%)
 Frame = +3

Query: 231  VKAKVQFIPDQPNKTPPLVGYFPSMYNPNEDP--DDEKRPRVRVYRNMNEKKNRTGRMEL 404
            V+A +Q + D  ++ PPLVGYFPS ++P E     +    RVRV RNM + K    R+++
Sbjct: 44   VQATIQVLQDHSDRAPPLVGYFPSGFDPEESARTGESSSTRVRVLRNMEKPK----RLQV 99

Query: 405  VVSPRDSSVEYVGTSYSGEAMA-PQFCHYAVGVLNKKTQTLKIVPIAANKIFRLEPRVGG 581
            VV+P  S V++VGT+YSGEA A  Q C+YA+GVL+K+TQTLKIVPIA+NKIFRLEP+VGG
Sbjct: 100  VVTPPGSKVDFVGTNYSGEAEAGQQHCNYALGVLDKETQTLKIVPIASNKIFRLEPKVGG 159

Query: 582  SDVADKEAGN---EEVSAEVQAN-MKAMLDTRYGTKKSLRQSKKMNALNKENDPETQKDL 749
             D ++KE  N   EE+SA+ +   M+  L   YGTKKS ++  K+N+L + +DP++  DL
Sbjct: 160  LDFSNKEPENSAVEELSAQQKTEKMRDKLTNLYGTKKSRKEVIKINSLKQADDPDSLNDL 219

Query: 750  ALKMKSVKINKEALESSTSDTVLNVPPFDVNATAPQQAYPLDKIILKGEWDFLQDIFKLL 929
              ++K V +NK+ALES+ + T  N+PP + +AT+P++AYPLDKIILKGEW FL+DI+K L
Sbjct: 220  DKQIKKVVVNKDALESTDAHTARNIPPHNTSATSPEEAYPLDKIILKGEWSFLEDIYKFL 279

Query: 930  SVGLEVTNNACPSFVCNRIHKLRESQDDVEKQTLASIFLYITHLVKFKDQHSMDGRASAK 1109
              G EV++N  P+F+ NRI+KLR+ QD+VEK+ L+ IF YITHL+KFKD H+MD R SAK
Sbjct: 280  QGGREVSSNTYPTFISNRIYKLRDIQDEVEKKKLSCIFSYITHLIKFKDLHNMDNRKSAK 339

Query: 1110 NHRIPNILYQKFMTMFFDAESKRLSDDKIHLLISYVLVLVLHADDFRTNPTDIANDLRMS 1289
             H  P+IL+QKF T+F   E K +S +K  LL+SYVLVL L+AD+FRT+ +DIA DLRM+
Sbjct: 340  RHNFPSILHQKFSTLF--GEEKIMSPEKHDLLVSYVLVLTLYADEFRTDFSDIAKDLRMN 397

Query: 1290 EVKLRDHFEKLGCKLSREKNMLYATLPVPLQFPKAKQRRRR 1412
             ++LR H+E LGCK+SR+ N+ +A LPVPLQFP+ + +RRR
Sbjct: 398  TIQLRTHYEHLGCKISRQNNISFAILPVPLQFPQTRPKRRR 438


>XP_010087702.1 DNA-directed RNA polymerase I subunit rpa49 [Morus notabilis]
            EXB29690.1 DNA-directed RNA polymerase I subunit rpa49
            [Morus notabilis]
          Length = 438

 Score =  421 bits (1083), Expect = e-140
 Identities = 216/401 (53%), Positives = 297/401 (74%), Gaps = 6/401 (1%)
 Frame = +3

Query: 228  RVKAKVQFIPDQPNKTPPLVGYFPSMYNPNEDPDDEKRPRV-RVYRNMNEKKNRTGRMEL 404
            +V+A +Q + +QP + PPLVGYFPS ++P +  D+     + RV+RN N+ K    R++L
Sbjct: 42   KVEATIQVVQNQPERAPPLVGYFPSGFDPKDGDDESSATAMARVFRNRNKPK----RLQL 97

Query: 405  VVSPRDSSVEYVGTSYSGEAMA-PQFCHYAVGVLNKKTQTLKIVPIAANKIFRLEPRVGG 581
            VVSP  ++V++VGT+YSGEA A  Q C+YA+GVL+K+TQTLKIVPIA+NKIFRLEP+V G
Sbjct: 98   VVSPNGANVDFVGTNYSGEAEAGQQHCNYALGVLDKETQTLKIVPIASNKIFRLEPKVRG 157

Query: 582  SDVADKEAGN----EEVSAEVQANMKAMLDTRYGTKKSLRQSKKMNALNKENDPETQKDL 749
              + +K++G+    E  +      +K + D RYGT KS+R++KK +AL + +DPETQKD+
Sbjct: 158  LRLPNKDSGSLAEGERSALSKSEKIKGLTD-RYGTNKSIREAKKRDALYQNDDPETQKDM 216

Query: 750  ALKMKSVKINKEALESSTSDTVLNVPPFDVNATAPQQAYPLDKIILKGEWDFLQDIFKLL 929
              K+K + I K+ALES+   T  N+PP++  AT+ Q+AYP++KIILKGEWDFL+DI++LL
Sbjct: 217  DEKIKQIVIKKDALESTQVHTDRNIPPYNAAATSSQEAYPIEKIILKGEWDFLEDIYRLL 276

Query: 930  SVGLEVTNNACPSFVCNRIHKLRESQDDVEKQTLASIFLYITHLVKFKDQHSMDGRASAK 1109
                E+ ++  PSF+ NRI  LRE++D+ EK+  A IF YITHL+KFKD HSMDG +SAK
Sbjct: 277  QEEAELKSDDYPSFISNRIQNLRETEDEEEKKRRACIFSYITHLIKFKDLHSMDGVSSAK 336

Query: 1110 NHRIPNILYQKFMTMFFDAESKRLSDDKIHLLISYVLVLVLHADDFRTNPTDIANDLRMS 1289
             H+ P+IL QKF  MF  +E K+L+  +  LLISYVLVL L+AD F+TN TDIA DLRM+
Sbjct: 337  RHKFPSILRQKFSAMFLSSEVKKLASKENDLLISYVLVLTLYADRFQTNLTDIAKDLRMT 396

Query: 1290 EVKLRDHFEKLGCKLSREKNMLYATLPVPLQFPKAKQRRRR 1412
             V LR H+E+LGCKL R+ N+ +ATLPVPLQFP  +QRRR+
Sbjct: 397  SVTLRVHYEQLGCKLVRQNNLWFATLPVPLQFPDLRQRRRK 437


>XP_002521367.1 PREDICTED: DNA-directed RNA polymerase I subunit rpa49 [Ricinus
            communis] XP_015576117.1 PREDICTED: DNA-directed RNA
            polymerase I subunit rpa49 [Ricinus communis] EEF41035.1
            DNA-directed RNA polymerase I 49 kDa polypeptide,
            putative [Ricinus communis]
          Length = 481

 Score =  421 bits (1083), Expect = e-140
 Identities = 225/424 (53%), Positives = 293/424 (69%), Gaps = 30/424 (7%)
 Frame = +3

Query: 231  VKAKVQFIPDQPNKTPPLVGYFPSMYNPNE--------DPDDEK-------RPRVRVYRN 365
            +  K++ I DQ +KTPP+VGYFPS Y P++        D  +E+       +P V+ YRN
Sbjct: 58   LNVKIEVIYDQTDKTPPIVGYFPSGYKPSKHNESNNLHDTSNEENATSSLSQPSVKFYRN 117

Query: 366  M------------NEKKNRTGRMELVVSPRDSSVEYVGTSYSGEAMAPQFCHYAVGVLNK 509
                         NEK   + RMELVVSP  S+V++VG SY GEA A Q C YA+GVL+K
Sbjct: 118  AQRTKIEKSSNERNEKWRSSERMELVVSPNGSNVDFVGKSYKGEATAAQLCTYALGVLDK 177

Query: 510  KTQTLKIVPIAANKIFRLEPRVGGSDVADKEAG---NEEVSAEVQANMKAMLDTRYGTKK 680
            KT+TLKI+PIA NKIFRLEP++ G D +DKE     NE++S E  A  K  L   YGTKK
Sbjct: 178  KTKTLKIMPIAGNKIFRLEPKIQGVDASDKEPSVLENEDLSKENMAVRKKTLTDTYGTKK 237

Query: 681  SLRQSKKMNALNKENDPETQKDLALKMKSVKINKEALESSTSDTVLNVPPFDVNATAPQQ 860
            S+ Q K+M  + + ++PE++KDL  K+ +V +NK ALE +++    N+PP + +AT PQ+
Sbjct: 238  SITQGKRMEIMMQGDNPESRKDLDQKIDNVVVNKAALEDTSAHVARNIPPHNTSATTPQE 297

Query: 861  AYPLDKIILKGEWDFLQDIFKLLSVGLEVTNNACPSFVCNRIHKLRESQDDVEKQTLASI 1040
            AYPL +IIL GEWD+L+D++++L  G     NA P FV NRIHKLRE QD+VE++T + I
Sbjct: 298  AYPLGRIILTGEWDYLEDLYEILQAGEGAAINAYPVFVRNRIHKLREIQDEVERKTYSRI 357

Query: 1041 FLYITHLVKFKDQHSMDGRASAKNHRIPNILYQKFMTMFFDAESKRLSDDKIHLLISYVL 1220
            F YITHL+KFKD HSMDG +SAKNH+ P+IL QKFM M F  ES++L  +KI LLISYVL
Sbjct: 358  FSYITHLLKFKDLHSMDGVSSAKNHKFPSILRQKFMGM-FTPESRKLPVEKIDLLISYVL 416

Query: 1221 VLVLHADDFRTNPTDIANDLRMSEVKLRDHFEKLGCKLSREKNMLYATLPVPLQFPKAKQ 1400
            VL L+ADDFRT+PTDIA DLR+S V +R HFE LGCK+  E  +  ATLPVPL+FP  +Q
Sbjct: 417  VLSLYADDFRTDPTDIAKDLRVSRVMVRTHFENLGCKIVCENKLSLATLPVPLKFPVQRQ 476

Query: 1401 RRRR 1412
            RR R
Sbjct: 477  RRAR 480


>XP_008462335.1 PREDICTED: DNA-directed RNA polymerase I subunit rpa49 [Cucumis melo]
          Length = 436

 Score =  419 bits (1076), Expect = e-139
 Identities = 218/400 (54%), Positives = 296/400 (74%), Gaps = 6/400 (1%)
 Frame = +3

Query: 231  VKAKVQFIPDQPNKTPPLVGYFPSMYNPNEDPDDEKRP--RVRVYRNMNEKKNRTGRMEL 404
            + AK+Q + +QP K PP+VGYFPS ++P++D D E+    R RVY++    +N+  RM+L
Sbjct: 42   MNAKIQVLSNQPQKIPPVVGYFPSGFDPHKDADKEQSHSVRARVYKH----RNKPNRMQL 97

Query: 405  VVSPRDSSVEYVGTSYSGEAMA-PQFCHYAVGVLNKKTQTLKIVPIAANKIFRLEPRVGG 581
            VVSP  S+V++VGT+Y GEA A  Q C YA+GVL+K TQ+LKIVPIA+N I RL+P+V G
Sbjct: 98   VVSPTGSNVDFVGTNYLGEATAGKQHCTYALGVLDKATQSLKIVPIASNMILRLDPKVRG 157

Query: 582  SDVADKEA---GNEEVSAEVQANMKAMLDTRYGTKKSLRQSKKMNALNKENDPETQKDLA 752
            SDV++ E+    NEE+S + +AN    L   YGTKKS +Q++K++AL +E+DPET+ DL 
Sbjct: 158  SDVSENESPSVANEELSLQEKANRMRELTALYGTKKSKKQAQKLHALKQEDDPETKNDLD 217

Query: 753  LKMKSVKINKEALESSTSDTVLNVPPFDVNATAPQQAYPLDKIILKGEWDFLQDIFKLLS 932
             +MK+V +NKEALE + ++   N+P ++ +AT PQ+ YPLDKIILKGEW FL+D++  L 
Sbjct: 218  GRMKNVVVNKEALEGTQAEIARNIPAYNASATTPQEVYPLDKIILKGEWSFLEDLYFRLR 277

Query: 933  VGLEVTNNACPSFVCNRIHKLRESQDDVEKQTLASIFLYITHLVKFKDQHSMDGRASAKN 1112
               E+ N   PSFV NRI+KL++ QD+ EK+ L  IF YITHL+K+KDQHSM   +SAK 
Sbjct: 278  ETAEI-NATYPSFVRNRIYKLQDIQDEEEKKKLCCIFSYITHLIKYKDQHSMGDVSSAKG 336

Query: 1113 HRIPNILYQKFMTMFFDAESKRLSDDKIHLLISYVLVLVLHADDFRTNPTDIANDLRMSE 1292
            H+IP++L QKF +MF  AES+RLS DKI+LLIS+VLVL L AD+F ++P DIA DLR S 
Sbjct: 337  HKIPSMLRQKFSSMFPTAESRRLSADKINLLISHVLVLTLFADEFSSDPADIAKDLRTSP 396

Query: 1293 VKLRDHFEKLGCKLSREKNMLYATLPVPLQFPKAKQRRRR 1412
              LR HF+ LGCK  R+ N+  ATLPVPLQFP+ +Q+RRR
Sbjct: 397  YDLRLHFDNLGCKFIRKNNLSLATLPVPLQFPELRQKRRR 436