BLASTX nr result

ID: Phellodendron21_contig00006336 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Phellodendron21_contig00006336
         (501 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_006445804.1 hypothetical protein CICLE_v10014057mg [Citrus cl...    64   6e-09
XP_006485496.1 PREDICTED: nuclear pore complex protein NUP1 isof...    64   6e-09

>XP_006445804.1 hypothetical protein CICLE_v10014057mg [Citrus clementina]
            XP_006485497.1 PREDICTED: nuclear pore complex protein
            NUP1 isoform X2 [Citrus sinensis] ESR59044.1 hypothetical
            protein CICLE_v10014057mg [Citrus clementina]
          Length = 1293

 Score = 64.3 bits (155), Expect = 6e-09
 Identities = 40/110 (36%), Positives = 45/110 (40%)
 Frame = +2

Query: 92   IFSFGAPANGSTLNNGSLASCQXXXXXXXXXXXXXIGFNQNLLXXXXXXXXXXXXXXXXX 271
            IFSFGAP+N STLNNGSLASC               GFNQNL                  
Sbjct: 787  IFSFGAPSNSSTLNNGSLASCPSLTSSPTQTLFSSSGFNQNLCSSSTVSFPTTNNGASSI 846

Query: 272  XXXXXXXXXXXXPIFKFGXXXXXXXXXXXXXXXXGIESTEAKKNETSIGS 421
                        P+F FG                GIESTE K+N+TS G+
Sbjct: 847  TTSSATASIAAAPVFLFGSSPFPSTSISPMAATSGIESTEGKRNDTSSGN 896


>XP_006485496.1 PREDICTED: nuclear pore complex protein NUP1 isoform X1 [Citrus
            sinensis]
          Length = 1297

 Score = 64.3 bits (155), Expect = 6e-09
 Identities = 40/110 (36%), Positives = 45/110 (40%)
 Frame = +2

Query: 92   IFSFGAPANGSTLNNGSLASCQXXXXXXXXXXXXXIGFNQNLLXXXXXXXXXXXXXXXXX 271
            IFSFGAP+N STLNNGSLASC               GFNQNL                  
Sbjct: 791  IFSFGAPSNSSTLNNGSLASCPSLTSSPTQTLFSSSGFNQNLCSSSTVSFPTTNNGASSI 850

Query: 272  XXXXXXXXXXXXPIFKFGXXXXXXXXXXXXXXXXGIESTEAKKNETSIGS 421
                        P+F FG                GIESTE K+N+TS G+
Sbjct: 851  TTSSATASIAAAPVFLFGSSPFPSTSISPMAATSGIESTEGKRNDTSSGN 900


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