BLASTX nr result
ID: Phellodendron21_contig00005195
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Phellodendron21_contig00005195
(584 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CAA30522.1 ORF 143 (chloroplast) [Glycine max] KHN32086.1 Putati... 194 1e-60
NP_862801.1 hypothetical protein CafeCp090 [Calycanthus floridus... 130 2e-36
YP_358631.1 hypothetical protein PhapfoPp085 [Phalaenopsis aphro... 126 1e-34
OAY85602.1 30S ribosomal protein S12, chloroplastic [Ananas como... 122 1e-33
AFK49064.1 unknown [Lotus japonicus] 118 8e-31
YP_009145083.1 ribosomal protein S12 (chloroplast) [Podococcus b... 115 1e-29
YP_001109550.1 hypothetical protein Poptr_cp072 [Populus trichoc... 107 2e-27
KQJ97119.1 hypothetical protein BRADI_3g28913 [Brachypodium dist... 101 7e-25
XP_017225397.1 PREDICTED: CASP-like protein 1D1 [Daucus carota s... 80 3e-24
YP_001312254.1 hypothetical protein CYtaCp089 [Cycas taitungensi... 94 4e-22
YP_007474607.1 hypothetical_protein (chloroplast) [Cycas revolut... 89 3e-20
XP_002894684.1 hypothetical protein ARALYDRAFT_892903 [Arabidops... 81 5e-17
AFS35523.1 ribosomal protein S12, partial (plastid) [Fragaria mo... 80 6e-17
EEF42577.1 conserved hypothetical protein [Ricinus communis] 61 8e-17
KRH54918.1 hypothetical protein GLYMA_06G218700 [Glycine max] 80 1e-16
KVG87221.1 hypothetical protein Ccrd_026132, partial [Cynara car... 78 3e-15
YP_009002279.1 ribosomal protein S12 (chloroplast) [Pinguicula e... 76 5e-14
YP_001152253.1 ORF40x [Pinus koraiensis] ABP35493.1 ORF40x (chlo... 72 8e-14
KVI11330.1 Ribosomal protein S12/S23 [Cynara cardunculus var. sc... 73 5e-13
OAY32019.1 hypothetical protein MANES_14G160100, partial [Maniho... 69 1e-12
>CAA30522.1 ORF 143 (chloroplast) [Glycine max] KHN32086.1 Putative 8.8 kDa
protein in rps12-tRNA-Val intergenic region [Glycine
soja]
Length = 143
Score = 194 bits (493), Expect = 1e-60
Identities = 109/148 (73%), Positives = 118/148 (79%), Gaps = 3/148 (2%)
Frame = +1
Query: 148 MRQKIFFLKRFDSELLYVQGSILK*F*RFSLTLSVSTNNSKCLDFFRTGPGQIAMIRSTS 327
MRQKIFFLK+FDSEL YVQG I K F RFSLTLSVSTNNSKCLDFFR GP QIAMIRST
Sbjct: 1 MRQKIFFLKKFDSELRYVQGPIWKEFQRFSLTLSVSTNNSKCLDFFRIGPSQIAMIRSTL 60
Query: 328 FY---TISET*GLNRMDM*NTGFPILAGKGGGETDTQFKVSKQNSILDLIDTYRILWKAV 498
Y +++ G + + N + K GG TDTQF+VSKQNSILD+IDTYRILWKAV
Sbjct: 61 HYFGNPRTQSYGYVKYRISNP-----SRKRGG-TDTQFQVSKQNSILDIIDTYRILWKAV 114
Query: 499 FDESRMYGLEGDLSYLSRSTLQYGVKKP 582
FDESRMYGLEGDLSYLSRSTLQYG KKP
Sbjct: 115 FDESRMYGLEGDLSYLSRSTLQYGAKKP 142
>NP_862801.1 hypothetical protein CafeCp090 [Calycanthus floridus var. glaucus]
NP_862814.1 hypothetical protein CafeCp092 [Calycanthus
floridus var. glaucus] Q7Y618.1 RecName:
Full=Uncharacterized 8.8 kDa protein in rps12-tRNA-Val
intergenic region (chloroplast) [Calycanthus floridus
var. glaucus] CAD28768.1 hypothetical protein
(chloroplast) [Calycanthus floridus var. glaucus]
CAD28782.1 hypothetical protein (chloroplast)
[Calycanthus floridus var. glaucus]
Length = 75
Score = 130 bits (328), Expect = 2e-36
Identities = 69/75 (92%), Positives = 69/75 (92%)
Frame = +1
Query: 148 MRQKIFFLKRFDSELLYVQGSILK*F*RFSLTLSVSTNNSKCLDFFRTGPGQIAMIRSTS 327
MRQKIFFLKRFDSELLYVQGSILK F RFSLTLSVSTNNSK LDFFRTGP QIA IRSTS
Sbjct: 1 MRQKIFFLKRFDSELLYVQGSILKSFQRFSLTLSVSTNNSKYLDFFRTGPSQIATIRSTS 60
Query: 328 FYTISET*GLNRMDM 372
FYTISET GLNRMDM
Sbjct: 61 FYTISETQGLNRMDM 75
>YP_358631.1 hypothetical protein PhapfoPp085 [Phalaenopsis aphrodite subsp.
formosana] AAW82567.1 hypothetical protein (chloroplast)
[Phalaenopsis aphrodite subsp. formosana]
Length = 77
Score = 126 bits (316), Expect = 1e-34
Identities = 65/75 (86%), Positives = 67/75 (89%)
Frame = -1
Query: 329 KEVLRIIAI*PGPVLKKSRHFELFVDTDKVRENL*NYFNIEPWTYNSSESNLFRKKIFCL 150
KEVLRIIAI GPVLKKSR+FELFVDTDK RENL NY NI PWTY+SSESNLFRKK FCL
Sbjct: 3 KEVLRIIAIGLGPVLKKSRYFELFVDTDKGRENLLNYSNIGPWTYSSSESNLFRKKSFCL 62
Query: 149 MVACSSPLTKLSLLG 105
MVACSSPL KLSLLG
Sbjct: 63 MVACSSPLPKLSLLG 77
>OAY85602.1 30S ribosomal protein S12, chloroplastic [Ananas comosus]
Length = 182
Score = 122 bits (306), Expect(2) = 1e-33
Identities = 73/111 (65%), Positives = 73/111 (65%)
Frame = +1
Query: 1 DRQQGRSSAL*ILIQDLYHLMMPCESLETCEVYG*PNNESFVRGLEQATMRQKIFFLKRF 180
DRQQGRSSAL GLEQATMRQKIFFLKRF
Sbjct: 83 DRQQGRSSAL---------------------------------GLEQATMRQKIFFLKRF 109
Query: 181 DSELLYVQGSILK*F*RFSLTLSVSTNNSKCLDFFRTGPGQIAMIRSTSFY 333
DSELLYVQG ILK F RFSLTLSVSTNNSK LDFFRTGP QIAMIRSTSFY
Sbjct: 110 DSELLYVQGPILKSFQRFSLTLSVSTNNSKYLDFFRTGPSQIAMIRSTSFY 160
Score = 48.5 bits (114), Expect(2) = 1e-33
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = +2
Query: 332 TLFRKPKDSIVWICKIQDFQS 394
TLFRKPKDSIVWICKIQDFQS
Sbjct: 162 TLFRKPKDSIVWICKIQDFQS 182
>AFK49064.1 unknown [Lotus japonicus]
Length = 128
Score = 118 bits (295), Expect = 8e-31
Identities = 69/103 (66%), Positives = 75/103 (72%), Gaps = 3/103 (2%)
Frame = +1
Query: 283 FRTGPGQIAMIRSTSFY---TISET*GLNRMDM*NTGFPILAGKGGGETDTQFKVSKQNS 453
FR GP QIAMIRST Y +++ G + + N K ETDTQF+VSKQNS
Sbjct: 31 FRLGPSQIAMIRSTLHYFENLRTQSYGYVKYRISNPS------KKRRETDTQFQVSKQNS 84
Query: 454 ILDLIDTYRILWKAVFDESRMYGLEGDLSYLSRSTLQYGVKKP 582
ILDLIDTYRIL KAVFDESRMYGLEGDLSYLSRSTLQYG KKP
Sbjct: 85 ILDLIDTYRILRKAVFDESRMYGLEGDLSYLSRSTLQYGAKKP 127
Score = 97.8 bits (242), Expect = 8e-23
Identities = 52/72 (72%), Positives = 55/72 (76%)
Frame = +3
Query: 192 IICPRFNIEIILEVFPDFVRVNKQFEMPRLF*NRSGSNSNDSKHFFLHYFGNLRTQSYGY 371
+ICPR NIE I EVF DFVRVNKQFEMPRLF R G + LHYF NLRTQSYGY
Sbjct: 1 MICPRSNIERISEVFLDFVRVNKQFEMPRLF--RLGPSQIAMIRSTLHYFENLRTQSYGY 58
Query: 372 VKYRISNPSRKR 407
VKYRISNPS+KR
Sbjct: 59 VKYRISNPSKKR 70
>YP_009145083.1 ribosomal protein S12 (chloroplast) [Podococcus barteri]
YP_009145127.1 ribosomal protein S12 (chloroplast)
[Podococcus barteri] AKJ85882.1 ribosomal protein S12
(chloroplast) [Podococcus barteri] AKJ85883.1 ribosomal
protein S12 (chloroplast) [Podococcus barteri]
Length = 121
Score = 115 bits (287), Expect = 1e-29
Identities = 56/56 (100%), Positives = 56/56 (100%)
Frame = +1
Query: 415 ETDTQFKVSKQNSILDLIDTYRILWKAVFDESRMYGLEGDLSYLSRSTLQYGVKKP 582
ETDTQFKVSKQNSILDLIDTYRILWKAVFDESRMYGLEGDLSYLSRSTLQYGVKKP
Sbjct: 65 ETDTQFKVSKQNSILDLIDTYRILWKAVFDESRMYGLEGDLSYLSRSTLQYGVKKP 120
>YP_001109550.1 hypothetical protein Poptr_cp072 [Populus trichocarpa]
YP_001109569.1 hypothetical protein Poptr_cp092 [Populus
trichocarpa] ABO36754.1 conserved hypothetical protein
(chloroplast) [Populus trichocarpa] ABO36773.1 conserved
hypothetical protein (chloroplast) [Populus trichocarpa]
Length = 65
Score = 107 bits (268), Expect = 2e-27
Identities = 53/58 (91%), Positives = 54/58 (93%)
Frame = +1
Query: 238 LTLSVSTNNSKCLDFFRTGPGQIAMIRSTSFYTISET*GLNRMDM*NTGFPILAGKGG 411
+TLSVSTNNSKCLDFFR GP QIAMIRSTSFYTISET GLNRMDM NTGFPILAGKGG
Sbjct: 1 MTLSVSTNNSKCLDFFRAGPSQIAMIRSTSFYTISETQGLNRMDMENTGFPILAGKGG 58
>KQJ97119.1 hypothetical protein BRADI_3g28913 [Brachypodium distachyon]
Length = 84
Score = 101 bits (252), Expect = 7e-25
Identities = 62/90 (68%), Positives = 66/90 (73%), Gaps = 2/90 (2%)
Frame = +1
Query: 148 MRQKIFFLKRFDSELLYVQGSILK*F*RFSLTLSVSTNNSKCLDFFRTGPGQIAMIRSTS 327
MRQKI FLKRFDSELLY RFSLTLSVSTNNSK LDFFRTGP +AMIRSTS
Sbjct: 1 MRQKILFLKRFDSELLY----------RFSLTLSVSTNNSKYLDFFRTGP-SLAMIRSTS 49
Query: 328 F--YTISET*GLNRMDM*NTGFPILAGKGG 411
F I ++ +RMDM NTGF ILAGKGG
Sbjct: 50 FSITLIRKSKDSDRMDMENTGFSILAGKGG 79
>XP_017225397.1 PREDICTED: CASP-like protein 1D1 [Daucus carota subsp. sativus]
Length = 232
Score = 79.7 bits (195), Expect(3) = 3e-24
Identities = 36/37 (97%), Positives = 36/37 (97%)
Frame = -3
Query: 519 VHTTFIEYGFPQNSICIYEIEYGILFTHFKLSIRFPP 409
VHTTFIEYGF QNSICIYEIEYGILFTHFKLSIRFPP
Sbjct: 172 VHTTFIEYGFVQNSICIYEIEYGILFTHFKLSIRFPP 208
Score = 48.1 bits (113), Expect(3) = 3e-24
Identities = 23/31 (74%), Positives = 26/31 (83%)
Frame = -1
Query: 425 VSVSPPPFPARIGNPVFYISIRLSP*VSEIV 333
+S+ PPFPARI NPVFYISIR SP VS+IV
Sbjct: 202 LSIRFPPFPARIENPVFYISIRFSPCVSQIV 232
Score = 31.6 bits (70), Expect(3) = 3e-24
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = -2
Query: 562 VGWISKDMKDLPPSRTY 512
+ WISKDMKDLPPS +
Sbjct: 157 IWWISKDMKDLPPSTVH 173
>YP_001312254.1 hypothetical protein CYtaCp089 [Cycas taitungensis] YP_001312284.1
hypothetical protein CYtaCp120 [Cycas taitungensis]
BAF64995.1 hypothetical protein (chloroplast) [Cycas
taitungensis] BAF65026.1 hypothetical protein
(chloroplast) [Cycas taitungensis]
Length = 64
Score = 94.0 bits (232), Expect = 4e-22
Identities = 50/64 (78%), Positives = 53/64 (82%), Gaps = 1/64 (1%)
Frame = -3
Query: 456 YGILFTHFKLSIRFPPPFSC*DWKSCILHIHTIESLGFRNSVKR-SASNHCYLTRTCSKK 280
Y ILFTHFKLSIRF P FSC DWKS ILHI TI+SLG + SVK+ S SNHCYLTRTCSKK
Sbjct: 2 YIILFTHFKLSIRFLP-FSCYDWKSRILHICTIKSLGSQKSVKKKSVSNHCYLTRTCSKK 60
Query: 279 VEAF 268
VE F
Sbjct: 61 VEVF 64
>YP_007474607.1 hypothetical_protein (chloroplast) [Cycas revoluta] YP_009308177.1
hypothetical protein (chloroplast) [Cycas
panzhihuaensis] AEX99157.1 hypothetical_protein
(chloroplast) [Cycas revoluta] AOS53126.1 hypothetical
protein (chloroplast) [Cycas panzhihuaensis]
Length = 60
Score = 89.0 bits (219), Expect = 3e-20
Identities = 48/63 (76%), Positives = 50/63 (79%)
Frame = -3
Query: 456 YGILFTHFKLSIRFPPPFSC*DWKSCILHIHTIESLGFRNSVKRSASNHCYLTRTCSKKV 277
Y ILFTHFKLSIRF P FSC DWKS ILHI TI+SLG + SV SNHCYLTRTCSKKV
Sbjct: 2 YIILFTHFKLSIRFLP-FSCYDWKSRILHICTIKSLGSQKSV---VSNHCYLTRTCSKKV 57
Query: 276 EAF 268
E F
Sbjct: 58 EVF 60
>XP_002894684.1 hypothetical protein ARALYDRAFT_892903 [Arabidopsis lyrata subsp.
lyrata] EFH70943.1 hypothetical protein
ARALYDRAFT_892903 [Arabidopsis lyrata subsp. lyrata]
Length = 60
Score = 80.9 bits (198), Expect = 5e-17
Identities = 40/45 (88%), Positives = 41/45 (91%)
Frame = +1
Query: 238 LTLSVSTNNSKCLDFFRTGPGQIAMIRSTSFYTISET*GLNRMDM 372
+TLSVSTNNSKCLDFFRT P QIAMIRST FYTISET GLNRMDM
Sbjct: 16 VTLSVSTNNSKCLDFFRTDPSQIAMIRSTYFYTISETQGLNRMDM 60
>AFS35523.1 ribosomal protein S12, partial (plastid) [Fragaria moschata]
Length = 40
Score = 80.1 bits (196), Expect = 6e-17
Identities = 38/39 (97%), Positives = 38/39 (97%)
Frame = +1
Query: 466 IDTYRILWKAVFDESRMYGLEGDLSYLSRSTLQYGVKKP 582
IDTY ILWKAVFDESRMYGLEGDLSYLSRSTLQYGVKKP
Sbjct: 1 IDTYIILWKAVFDESRMYGLEGDLSYLSRSTLQYGVKKP 39
>EEF42577.1 conserved hypothetical protein [Ricinus communis]
Length = 286
Score = 60.8 bits (146), Expect(2) = 8e-17
Identities = 28/31 (90%), Positives = 28/31 (90%)
Frame = -3
Query: 501 EYGFPQNSICIYEIEYGILFTHFKLSIRFPP 409
EYGF QNSICIYEIEYGILFTHFKLSI PP
Sbjct: 232 EYGFLQNSICIYEIEYGILFTHFKLSICSPP 262
Score = 53.5 bits (127), Expect(2) = 8e-17
Identities = 25/31 (80%), Positives = 28/31 (90%)
Frame = -1
Query: 425 VSVSPPPFPARIGNPVFYISIRLSP*VSEIV 333
+S+ PPFPARIGNPVFYISIRLSP VS+IV
Sbjct: 256 LSICSPPFPARIGNPVFYISIRLSPRVSKIV 286
>KRH54918.1 hypothetical protein GLYMA_06G218700 [Glycine max]
Length = 87
Score = 80.5 bits (197), Expect = 1e-16
Identities = 41/49 (83%), Positives = 42/49 (85%)
Frame = +1
Query: 148 MRQKIFFLKRFDSELLYVQGSILK*F*RFSLTLSVSTNNSKCLDFFRTG 294
MRQKIFFLK+FDSEL YVQG I K F RFS TLSVSTNNSKCLDFFR G
Sbjct: 1 MRQKIFFLKKFDSELRYVQGPIWKEFQRFSWTLSVSTNNSKCLDFFRIG 49
>KVG87221.1 hypothetical protein Ccrd_026132, partial [Cynara cardunculus var.
scolymus]
Length = 113
Score = 77.8 bits (190), Expect = 3e-15
Identities = 35/36 (97%), Positives = 36/36 (100%)
Frame = -1
Query: 221 YFNIEPWTYNSSESNLFRKKIFCLMVACSSPLTKLS 114
+FNIEPWTYNSSESNLFRKKIFCLMVACSSPLTKLS
Sbjct: 32 FFNIEPWTYNSSESNLFRKKIFCLMVACSSPLTKLS 67
>YP_009002279.1 ribosomal protein S12 (chloroplast) [Pinguicula ehlersiae]
CDL78835.1 ribosomal protein S12 (chloroplast)
[Pinguicula ehlersiae]
Length = 156
Score = 75.9 bits (185), Expect = 5e-14
Identities = 37/40 (92%), Positives = 38/40 (95%)
Frame = +1
Query: 463 LIDTYRILWKAVFDESRMYGLEGDLSYLSRSTLQYGVKKP 582
+IDTYRIL KAVFDESRMYGL GDLSYLSRSTLQYGVKKP
Sbjct: 116 IIDTYRILRKAVFDESRMYGLGGDLSYLSRSTLQYGVKKP 155
>YP_001152253.1 ORF40x [Pinus koraiensis] ABP35493.1 ORF40x (chloroplast) [Pinus
koraiensis]
Length = 40
Score = 72.0 bits (175), Expect = 8e-14
Identities = 31/38 (81%), Positives = 32/38 (84%)
Frame = +2
Query: 470 IHIEFCGKPYSMKVVCTAWREIFHIFRDPPYNMGSKSQ 583
+ IE CGKPYS KVVCT WREIFH FRDPPYNM SKSQ
Sbjct: 1 MQIESCGKPYSTKVVCTVWREIFHTFRDPPYNMESKSQ 38
>KVI11330.1 Ribosomal protein S12/S23 [Cynara cardunculus var. scolymus]
Length = 157
Score = 73.2 bits (178), Expect = 5e-13
Identities = 39/62 (62%), Positives = 42/62 (67%)
Frame = +3
Query: 129 GTGAGYHETKDLLSKEIRFGTIICPRFNIEIILEVFPDFVRVNKQFEMPRLF*NRSGSNS 308
G GAGYHETKD LSKEI+F TIICPRFNIE EVFPDFV N+S SN+
Sbjct: 81 GGGAGYHETKDFLSKEIQFRTIICPRFNIEKNSEVFPDFVH------------NKSESNN 128
Query: 309 ND 314
ND
Sbjct: 129 ND 130
Score = 53.9 bits (128), Expect = 8e-06
Identities = 30/55 (54%), Positives = 35/55 (63%), Gaps = 4/55 (7%)
Frame = +2
Query: 242 LCPCQQTIRNASTFLEQVRVK*Q*----FEALLFTLFRKPKDSIVWICKIQDFQS 394
+CP +N+ F + V K + FEALLF LFRKPKD IVWIC IQDFQS
Sbjct: 103 ICPRFNIEKNSEVFPDFVHNKSESNNNDFEALLFMLFRKPKDPIVWICIIQDFQS 157
>OAY32019.1 hypothetical protein MANES_14G160100, partial [Manihot esculenta]
Length = 48
Score = 68.9 bits (167), Expect = 1e-12
Identities = 34/48 (70%), Positives = 39/48 (81%)
Frame = +1
Query: 229 RFSLTLSVSTNNSKCLDFFRTGPGQIAMIRSTSFYTISET*GLNRMDM 372
RF LSVS NNSKCL+FFRT P QIA+IR++SFYTIS+ LNRMDM
Sbjct: 1 RFFFILSVSINNSKCLNFFRTSPSQIAIIRNSSFYTISKIQELNRMDM 48