BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Phellodendron21_contig00004901
         (2055 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_006484698.1 PREDICTED: RNA polymerase sigma factor sigA [Citr...   896   0.0  
XP_006437403.1 hypothetical protein CICLE_v10031289mg [Citrus cl...   896   0.0  
KDO48032.1 hypothetical protein CISIN_1g010521mg [Citrus sinensi...   894   0.0  
KDO48034.1 hypothetical protein CISIN_1g010521mg [Citrus sinensis]    868   0.0  
KDO48031.1 hypothetical protein CISIN_1g010521mg [Citrus sinensis]    835   0.0  
EOY10268.1 Sigma factor A isoform 1 [Theobroma cacao]                 788   0.0  
XP_007029766.2 PREDICTED: RNA polymerase sigma factor sigA isofo...   785   0.0  
OAY41811.1 hypothetical protein MANES_09G130800 [Manihot esculen...   780   0.0  
XP_002524027.2 PREDICTED: RNA polymerase sigma factor sigA [Rici...   779   0.0  
EEF38395.1 RNA polymerase sigma factor rpoD, putative [Ricinus c...   777   0.0  
OMP05985.1 RNA polymerase sigma-70 [Corchorus olitorius]              776   0.0  
OMO87271.1 RNA polymerase sigma-70 [Corchorus capsularis]             774   0.0  
XP_011012457.1 PREDICTED: RNA polymerase sigma factor sigA [Popu...   770   0.0  
XP_012492333.1 PREDICTED: RNA polymerase sigma factor sigA-like ...   770   0.0  
XP_002325882.1 RNA POLYMERASE SIGMA SUBUNIT 1 family protein [Po...   768   0.0  
XP_012070278.1 PREDICTED: RNA polymerase sigma factor sigA [Jatr...   767   0.0  
KDO48035.1 hypothetical protein CISIN_1g010521mg [Citrus sinensis]    763   0.0  
XP_016671610.1 PREDICTED: RNA polymerase sigma factor sigA-like ...   763   0.0  
XP_016697692.1 PREDICTED: RNA polymerase sigma factor sigA-like ...   761   0.0  
XP_017630518.1 PREDICTED: RNA polymerase sigma factor sigA-like ...   761   0.0  

>XP_006484698.1 PREDICTED: RNA polymerase sigma factor sigA [Citrus sinensis]
            XP_006484699.1 PREDICTED: RNA polymerase sigma factor
            sigA [Citrus sinensis] XP_006484700.1 PREDICTED: RNA
            polymerase sigma factor sigA [Citrus sinensis]
          Length = 508

 Score =  896 bits (2315), Expect = 0.0
 Identities = 457/508 (89%), Positives = 477/508 (93%)
 Frame = +1

Query: 232  MMATAAVIGLSTGKRLLSSSFYYSDISEKLSYINDLGSANSQVGSTKNVVAAKKSSNYGP 411
            MMATAAVIGLS GKRLLSSSFYYSDISEK SYINDLGSANSQVGSTKNVVAAKKSSNY P
Sbjct: 1    MMATAAVIGLSAGKRLLSSSFYYSDISEKFSYINDLGSANSQVGSTKNVVAAKKSSNYNP 60

Query: 412  SFPSSNQQTQSTKALKEHADASFAFTTEPWFEMFIDIEEESSELDYSVEALLLLQKSMLE 591
            SFPSSN+QTQ  KALKEH D +FA T EPW E    IEEESSELDYSVEALLLLQKSMLE
Sbjct: 61   SFPSSNRQTQPIKALKEHVDTNFASTAEPWAEPPNSIEEESSELDYSVEALLLLQKSMLE 120

Query: 592  KQWSLSFEGTVSTDSPSKKTHKKVPVTCSGVSARQRRMNSKKKILGHNKSAMQHNGTKQL 771
            KQW+LSFE TV TDSPSKKTHKKVPVTCSGVSARQRR+NSKKKIL  NKS  Q NG+KQL
Sbjct: 121  KQWNLSFERTVLTDSPSKKTHKKVPVTCSGVSARQRRLNSKKKILSQNKSVPQQNGSKQL 180

Query: 772  RSMISPELIQNHLKGYVKGVISDELLTHAEVVRLSKKIKTGLSLDEHKSRLQERLGCEPS 951
            RSMISPELIQNHLKGYVKGV+S+ELLTHAEVVRLSKKIKTGLSLD+HK RL+ERLGCEPS
Sbjct: 181  RSMISPELIQNHLKGYVKGVVSEELLTHAEVVRLSKKIKTGLSLDDHKLRLKERLGCEPS 240

Query: 952  VEQLAASLRISRPELQSIMMECSLAREKLVMRNVCLVLSIAQRYDNMGADMADLVQSGLI 1131
            +EQLAASLRISRPELQSI+MECSLAREKLVM NV LV+SIAQRYDNMGADMADLVQ GLI
Sbjct: 241  MEQLAASLRISRPELQSILMECSLAREKLVMSNVRLVMSIAQRYDNMGADMADLVQGGLI 300

Query: 1132 GLLRGIEKFDSSKGYKISTYVYWWIRQGVSKALVENSRTLRLPNHLHERLGLIRNAKIRL 1311
            GLLRGIEKFDSSKG+KISTYVYWWIRQGVS+ALVENSRTLRLPNHLHERLGLIRNAK+RL
Sbjct: 301  GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPNHLHERLGLIRNAKLRL 360

Query: 1312 KEKGITPSVDMIAEYLNMSQKKVRNATEAMCKVFSLDRQAFPSLNGLPGETHHSYIADNR 1491
            +EKG+TPSVD IAEYLNMSQKKVRNATEA+ KVFSLDR+AFPSLNGLPGETHHSYIADNR
Sbjct: 361  EEKGVTPSVDRIAEYLNMSQKKVRNATEAIGKVFSLDREAFPSLNGLPGETHHSYIADNR 420

Query: 1492 VENNPWHGVDDWALKDEVNKLIMVTLAEREREIICLYYGLDKECLTWEDISKRIGLSRER 1671
            VENNPWHGVDDWALKDEVNKLI+VTL EREREII LYYGLDKECLTWEDISKRIGLSRER
Sbjct: 421  VENNPWHGVDDWALKDEVNKLIIVTLGEREREIIRLYYGLDKECLTWEDISKRIGLSRER 480

Query: 1672 VRQVGLVALEKLKHAARKKNMEAMLAKH 1755
            VRQVGLVALEKLKHAARKK MEAML KH
Sbjct: 481  VRQVGLVALEKLKHAARKKKMEAMLVKH 508


>XP_006437403.1 hypothetical protein CICLE_v10031289mg [Citrus clementina] ESR50643.1
            hypothetical protein CICLE_v10031289mg [Citrus
            clementina]
          Length = 508

 Score =  896 bits (2315), Expect = 0.0
 Identities = 455/508 (89%), Positives = 478/508 (94%)
 Frame = +1

Query: 232  MMATAAVIGLSTGKRLLSSSFYYSDISEKLSYINDLGSANSQVGSTKNVVAAKKSSNYGP 411
            MMATAAVIGLS GKRLLSSSFYYSDISEK SYINDLGSANSQVGSTKNVVAAKKSSNY P
Sbjct: 1    MMATAAVIGLSAGKRLLSSSFYYSDISEKFSYINDLGSANSQVGSTKNVVAAKKSSNYNP 60

Query: 412  SFPSSNQQTQSTKALKEHADASFAFTTEPWFEMFIDIEEESSELDYSVEALLLLQKSMLE 591
            SFPSSN+QTQ  KALKEH D +FA T EPW E    IEEESSELDYSVEALLLLQKSMLE
Sbjct: 61   SFPSSNRQTQPIKALKEHVDTNFASTAEPWAEPPNSIEEESSELDYSVEALLLLQKSMLE 120

Query: 592  KQWSLSFEGTVSTDSPSKKTHKKVPVTCSGVSARQRRMNSKKKILGHNKSAMQHNGTKQL 771
            KQW+LSFE TV TDSPSKKTHKKVPVTCSGVSARQRR+NSKKKIL  NKS +Q NG+KQL
Sbjct: 121  KQWNLSFERTVLTDSPSKKTHKKVPVTCSGVSARQRRLNSKKKILSQNKSVLQQNGSKQL 180

Query: 772  RSMISPELIQNHLKGYVKGVISDELLTHAEVVRLSKKIKTGLSLDEHKSRLQERLGCEPS 951
            RSMISPELIQNHLKGYVKGV+S+ELLTHAEVVRLSKKIKTGLSLD+HK RL+ERLGCEPS
Sbjct: 181  RSMISPELIQNHLKGYVKGVVSEELLTHAEVVRLSKKIKTGLSLDDHKLRLKERLGCEPS 240

Query: 952  VEQLAASLRISRPELQSIMMECSLAREKLVMRNVCLVLSIAQRYDNMGADMADLVQSGLI 1131
            +EQLAASLRISRPELQSI+MECSLAREKLVM NV LV+SIAQRYDNMGADMADL+Q GLI
Sbjct: 241  MEQLAASLRISRPELQSILMECSLAREKLVMSNVRLVMSIAQRYDNMGADMADLIQGGLI 300

Query: 1132 GLLRGIEKFDSSKGYKISTYVYWWIRQGVSKALVENSRTLRLPNHLHERLGLIRNAKIRL 1311
            GLLRGIEKFDSSKG+KISTYVYWWIRQGVS+ALVENSRTLRLPNHLHERLGLIRNAK+RL
Sbjct: 301  GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPNHLHERLGLIRNAKLRL 360

Query: 1312 KEKGITPSVDMIAEYLNMSQKKVRNATEAMCKVFSLDRQAFPSLNGLPGETHHSYIADNR 1491
            +EKG+TP+VD IAEYLNMSQKKVRNATEA+ KVFSLDR+AFPSLNGLPGETHHSYIADNR
Sbjct: 361  EEKGVTPAVDRIAEYLNMSQKKVRNATEAIGKVFSLDREAFPSLNGLPGETHHSYIADNR 420

Query: 1492 VENNPWHGVDDWALKDEVNKLIMVTLAEREREIICLYYGLDKECLTWEDISKRIGLSRER 1671
            VENNPWHGVDDWALKDEVNKLI+VTL EREREII LYYGLDKECLTWEDISKRIGLSRER
Sbjct: 421  VENNPWHGVDDWALKDEVNKLIIVTLGEREREIIRLYYGLDKECLTWEDISKRIGLSRER 480

Query: 1672 VRQVGLVALEKLKHAARKKNMEAMLAKH 1755
            VRQVGLVALEKLKHAARKK MEAML KH
Sbjct: 481  VRQVGLVALEKLKHAARKKKMEAMLVKH 508


>KDO48032.1 hypothetical protein CISIN_1g010521mg [Citrus sinensis] KDO48033.1
            hypothetical protein CISIN_1g010521mg [Citrus sinensis]
          Length = 508

 Score =  894 bits (2310), Expect = 0.0
 Identities = 456/508 (89%), Positives = 477/508 (93%)
 Frame = +1

Query: 232  MMATAAVIGLSTGKRLLSSSFYYSDISEKLSYINDLGSANSQVGSTKNVVAAKKSSNYGP 411
            MMATAAVIGLS GKRLLSSSFYYSDISEK SYINDLGSANSQVGSTKNVVAAKKSSNY P
Sbjct: 1    MMATAAVIGLSAGKRLLSSSFYYSDISEKFSYINDLGSANSQVGSTKNVVAAKKSSNYNP 60

Query: 412  SFPSSNQQTQSTKALKEHADASFAFTTEPWFEMFIDIEEESSELDYSVEALLLLQKSMLE 591
            SFPSSN+QTQ  KALKEH D +FA T EPW E    IEEESSELDYSVEALLLLQKSMLE
Sbjct: 61   SFPSSNRQTQPIKALKEHVDTNFASTAEPWAEPPNSIEEESSELDYSVEALLLLQKSMLE 120

Query: 592  KQWSLSFEGTVSTDSPSKKTHKKVPVTCSGVSARQRRMNSKKKILGHNKSAMQHNGTKQL 771
            KQW+LSFE TV TDSPSKKTHKKVPVTCSGVSARQRR+NSKKKIL  NKS +Q NG+KQL
Sbjct: 121  KQWNLSFERTVLTDSPSKKTHKKVPVTCSGVSARQRRLNSKKKILSQNKSILQQNGSKQL 180

Query: 772  RSMISPELIQNHLKGYVKGVISDELLTHAEVVRLSKKIKTGLSLDEHKSRLQERLGCEPS 951
            RSMISPELIQN LKGYVKGV+S+ELLTHAEVVRLSKKIKTGLSLD+HK RL+ERLGCEPS
Sbjct: 181  RSMISPELIQNRLKGYVKGVVSEELLTHAEVVRLSKKIKTGLSLDDHKLRLKERLGCEPS 240

Query: 952  VEQLAASLRISRPELQSIMMECSLAREKLVMRNVCLVLSIAQRYDNMGADMADLVQSGLI 1131
            +EQLAASLRISRPELQSI+MECSLAREKLVM NV LV+SIAQRYDNMGADMADLVQ GLI
Sbjct: 241  MEQLAASLRISRPELQSILMECSLAREKLVMSNVRLVMSIAQRYDNMGADMADLVQGGLI 300

Query: 1132 GLLRGIEKFDSSKGYKISTYVYWWIRQGVSKALVENSRTLRLPNHLHERLGLIRNAKIRL 1311
            GLLRGIEKFDSSKG+KISTYVYWWIRQGVS+ALVENSRTLRLPNHLHERLGLIRNAK+RL
Sbjct: 301  GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPNHLHERLGLIRNAKLRL 360

Query: 1312 KEKGITPSVDMIAEYLNMSQKKVRNATEAMCKVFSLDRQAFPSLNGLPGETHHSYIADNR 1491
            +EKG+TPSVD IAEYLNMSQKKVRNATEA+ KVFSLDR+AFPSLNGLPGETHHSYIADNR
Sbjct: 361  EEKGVTPSVDRIAEYLNMSQKKVRNATEAIGKVFSLDREAFPSLNGLPGETHHSYIADNR 420

Query: 1492 VENNPWHGVDDWALKDEVNKLIMVTLAEREREIICLYYGLDKECLTWEDISKRIGLSRER 1671
            VENNPWHGVDDWALKDEVNKLI+VTL EREREII LYYGLDKECLTWEDISKRIGLSRER
Sbjct: 421  VENNPWHGVDDWALKDEVNKLIIVTLGEREREIIRLYYGLDKECLTWEDISKRIGLSRER 480

Query: 1672 VRQVGLVALEKLKHAARKKNMEAMLAKH 1755
            VRQVGLVALEKLKHAARKK MEAML KH
Sbjct: 481  VRQVGLVALEKLKHAARKKKMEAMLVKH 508


>KDO48034.1 hypothetical protein CISIN_1g010521mg [Citrus sinensis]
          Length = 499

 Score =  868 bits (2243), Expect = 0.0
 Identities = 447/508 (87%), Positives = 468/508 (92%)
 Frame = +1

Query: 232  MMATAAVIGLSTGKRLLSSSFYYSDISEKLSYINDLGSANSQVGSTKNVVAAKKSSNYGP 411
            MMATAAVIGLS GKRLLSSSFYYSDISEK SYINDLGSANSQVGSTKNVVAAKKSSNY P
Sbjct: 1    MMATAAVIGLSAGKRLLSSSFYYSDISEKFSYINDLGSANSQVGSTKNVVAAKKSSNYNP 60

Query: 412  SFPSSNQQTQSTKALKEHADASFAFTTEPWFEMFIDIEEESSELDYSVEALLLLQKSMLE 591
            SFPSSN+QTQ  KALKEH D +FA T EPW E    IEEESSELDYSVEALLLLQKSMLE
Sbjct: 61   SFPSSNRQTQPIKALKEHVDTNFASTAEPWAEPPNSIEEESSELDYSVEALLLLQKSMLE 120

Query: 592  KQWSLSFEGTVSTDSPSKKTHKKVPVTCSGVSARQRRMNSKKKILGHNKSAMQHNGTKQL 771
            KQW+LSFE TV TDSPSKKTHKKVPVTCSGVSARQRR+NSKKKIL  NKS +Q NG+KQL
Sbjct: 121  KQWNLSFERTVLTDSPSKKTHKKVPVTCSGVSARQRRLNSKKKILSQNKSILQQNGSKQL 180

Query: 772  RSMISPELIQNHLKGYVKGVISDELLTHAEVVRLSKKIKTGLSLDEHKSRLQERLGCEPS 951
            RSMISPELIQN LKGYVKGV+S+ELLTHAEVVRLSKKIKTGLSLD+HK RL+ERLG    
Sbjct: 181  RSMISPELIQNRLKGYVKGVVSEELLTHAEVVRLSKKIKTGLSLDDHKLRLKERLG---- 236

Query: 952  VEQLAASLRISRPELQSIMMECSLAREKLVMRNVCLVLSIAQRYDNMGADMADLVQSGLI 1131
                 +SLRISRPELQSI+MECSLAREKLVM NV LV+SIAQRYDNMGADMADLVQ GLI
Sbjct: 237  -----SSLRISRPELQSILMECSLAREKLVMSNVRLVMSIAQRYDNMGADMADLVQGGLI 291

Query: 1132 GLLRGIEKFDSSKGYKISTYVYWWIRQGVSKALVENSRTLRLPNHLHERLGLIRNAKIRL 1311
            GLLRGIEKFDSSKG+KISTYVYWWIRQGVS+ALVENSRTLRLPNHLHERLGLIRNAK+RL
Sbjct: 292  GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPNHLHERLGLIRNAKLRL 351

Query: 1312 KEKGITPSVDMIAEYLNMSQKKVRNATEAMCKVFSLDRQAFPSLNGLPGETHHSYIADNR 1491
            +EKG+TPSVD IAEYLNMSQKKVRNATEA+ KVFSLDR+AFPSLNGLPGETHHSYIADNR
Sbjct: 352  EEKGVTPSVDRIAEYLNMSQKKVRNATEAIGKVFSLDREAFPSLNGLPGETHHSYIADNR 411

Query: 1492 VENNPWHGVDDWALKDEVNKLIMVTLAEREREIICLYYGLDKECLTWEDISKRIGLSRER 1671
            VENNPWHGVDDWALKDEVNKLI+VTL EREREII LYYGLDKECLTWEDISKRIGLSRER
Sbjct: 412  VENNPWHGVDDWALKDEVNKLIIVTLGEREREIIRLYYGLDKECLTWEDISKRIGLSRER 471

Query: 1672 VRQVGLVALEKLKHAARKKNMEAMLAKH 1755
            VRQVGLVALEKLKHAARKK MEAML KH
Sbjct: 472  VRQVGLVALEKLKHAARKKKMEAMLVKH 499


>KDO48031.1 hypothetical protein CISIN_1g010521mg [Citrus sinensis]
          Length = 485

 Score =  835 bits (2157), Expect = 0.0
 Identities = 433/508 (85%), Positives = 454/508 (89%)
 Frame = +1

Query: 232  MMATAAVIGLSTGKRLLSSSFYYSDISEKLSYINDLGSANSQVGSTKNVVAAKKSSNYGP 411
            MMATAAVIGLS GKRLLSSSFYYSDISEK SYINDLGSANSQVGSTKNVVAAKKSSNY P
Sbjct: 1    MMATAAVIGLSAGKRLLSSSFYYSDISEKFSYINDLGSANSQVGSTKNVVAAKKSSNYNP 60

Query: 412  SFPSSNQQTQSTKALKEHADASFAFTTEPWFEMFIDIEEESSELDYSVEALLLLQKSMLE 591
            SFPSSN+QTQ  KALKEH D +FA T EPW E    IEEESSELDYSVEALLLLQKSMLE
Sbjct: 61   SFPSSNRQTQPIKALKEHVDTNFASTAEPWAEPPNSIEEESSELDYSVEALLLLQKSMLE 120

Query: 592  KQWSLSFEGTVSTDSPSKKTHKKVPVTCSGVSARQRRMNSKKKILGHNKSAMQHNGTKQL 771
            KQW+LSFE TV TDSPSKKTHKKVPVTCSGVSARQRR+NSKKKIL  NKS +Q NG+KQL
Sbjct: 121  KQWNLSFERTVLTDSPSKKTHKKVPVTCSGVSARQRRLNSKKKILSQNKSILQQNGSKQL 180

Query: 772  RSMISPELIQNHLKGYVKGVISDELLTHAEVVRLSKKIKTGLSLDEHKSRLQERLGCEPS 951
            RSMISPELIQN LKGYVKGV+S+ELLTHAEVVRLSKKIKTGLSLD+HK RL+ERLGCEPS
Sbjct: 181  RSMISPELIQNRLKGYVKGVVSEELLTHAEVVRLSKKIKTGLSLDDHKLRLKERLGCEPS 240

Query: 952  VEQLAASLRISRPELQSIMMECSLAREKLVMRNVCLVLSIAQRYDNMGADMADLVQSGLI 1131
            +EQLAASLRISRPELQSI+MECSLAREKLVM NV LV+SIAQRYDNMGADMADLVQ GLI
Sbjct: 241  MEQLAASLRISRPELQSILMECSLAREKLVMSNVRLVMSIAQRYDNMGADMADLVQGGLI 300

Query: 1132 GLLRGIEKFDSSKGYKISTYVYWWIRQGVSKALVENSRTLRLPNHLHERLGLIRNAKIRL 1311
            GLLRGIEKFDSSKG+KISTYVYWWIRQGVS+ALVENSRTLRLPNHLHERLGLIRNAK+RL
Sbjct: 301  GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPNHLHERLGLIRNAKLRL 360

Query: 1312 KEKGITPSVDMIAEYLNMSQKKVRNATEAMCKVFSLDRQAFPSLNGLPGETHHSYIADNR 1491
            +EKG+TPSVD IAEYLNMSQKKVRNATE +                       +YIADNR
Sbjct: 361  EEKGVTPSVDRIAEYLNMSQKKVRNATEVL-----------------------AYIADNR 397

Query: 1492 VENNPWHGVDDWALKDEVNKLIMVTLAEREREIICLYYGLDKECLTWEDISKRIGLSRER 1671
            VENNPWHGVDDWALKDEVNKLI+VTL EREREII LYYGLDKECLTWEDISKRIGLSRER
Sbjct: 398  VENNPWHGVDDWALKDEVNKLIIVTLGEREREIIRLYYGLDKECLTWEDISKRIGLSRER 457

Query: 1672 VRQVGLVALEKLKHAARKKNMEAMLAKH 1755
            VRQVGLVALEKLKHAARKK MEAML KH
Sbjct: 458  VRQVGLVALEKLKHAARKKKMEAMLVKH 485


>EOY10268.1 Sigma factor A isoform 1 [Theobroma cacao]
          Length = 508

 Score =  788 bits (2035), Expect = 0.0
 Identities = 407/509 (79%), Positives = 449/509 (88%), Gaps = 1/509 (0%)
 Frame = +1

Query: 232  MMATAAVIGLSTGKRLLSSSFYYSDISEKLSYINDLGSANSQVGSTKNVVAAKKSSNYGP 411
            MMATAAVIGL+TGKRLLSSSF YSDI EKLSY ND GS++ Q  STK+++ AKKSSN   
Sbjct: 1    MMATAAVIGLTTGKRLLSSSFSYSDIIEKLSYANDYGSSHHQTSSTKSLIVAKKSSNCSQ 60

Query: 412  SFPSSNQQTQSTKALKEHAD-ASFAFTTEPWFEMFIDIEEESSELDYSVEALLLLQKSML 588
            S PSSN++ QS KALKEH D AS   T EP F+   D+E ES +LDYSVEALLLLQKSML
Sbjct: 61   SLPSSNRRAQSIKALKEHVDSASIVSTAEPLFQGSNDLEVESYDLDYSVEALLLLQKSML 120

Query: 589  EKQWSLSFEGTVSTDSPSKKTHKKVPVTCSGVSARQRRMNSKKKILGHNKSAMQHNGTKQ 768
            EKQW+LSFE TV T+SPS+K HKK+PVTCSGVSARQRR N+K+KIL  NKS +Q N  KQ
Sbjct: 121  EKQWTLSFERTVFTESPSRKIHKKIPVTCSGVSARQRRFNTKRKILIQNKSIIQPNA-KQ 179

Query: 769  LRSMISPELIQNHLKGYVKGVISDELLTHAEVVRLSKKIKTGLSLDEHKSRLQERLGCEP 948
            LRS+ISPEL+Q+ LKGYVKGV+SDELL+HAEVVRLSKKIK GLSL+EH+ RL+ERLGCEP
Sbjct: 180  LRSLISPELLQSRLKGYVKGVVSDELLSHAEVVRLSKKIKAGLSLEEHRLRLKERLGCEP 239

Query: 949  SVEQLAASLRISRPELQSIMMECSLAREKLVMRNVCLVLSIAQRYDNMGADMADLVQSGL 1128
            S EQLA SL+ISR EL+S ++ECSLAREKL M NV LV+SIAQRYDNMGA+M+DL+Q GL
Sbjct: 240  SDEQLATSLKISRAELRSKLIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMSDLIQGGL 299

Query: 1129 IGLLRGIEKFDSSKGYKISTYVYWWIRQGVSKALVENSRTLRLPNHLHERLGLIRNAKIR 1308
            IGLLRGIEKFDSSKGYKISTYVYWWIRQGVS+ALVENSRTLRLP HLHERLGLIRNAKIR
Sbjct: 300  IGLLRGIEKFDSSKGYKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKIR 359

Query: 1309 LKEKGITPSVDMIAEYLNMSQKKVRNATEAMCKVFSLDRQAFPSLNGLPGETHHSYIADN 1488
            L+EKGITP++D IAE LNMSQKKVRNATEA+ KVFSLDR AFPSLNGLPGETHHSYIADN
Sbjct: 360  LEEKGITPTIDRIAESLNMSQKKVRNATEAVSKVFSLDRDAFPSLNGLPGETHHSYIADN 419

Query: 1489 RVENNPWHGVDDWALKDEVNKLIMVTLAEREREIICLYYGLDKECLTWEDISKRIGLSRE 1668
             VEN PWHGVD+WALKDEVN+LI +TL EREREII LYYGLDKE LTWEDISKRIGLSRE
Sbjct: 420  HVENIPWHGVDEWALKDEVNRLITITLGEREREIIRLYYGLDKESLTWEDISKRIGLSRE 479

Query: 1669 RVRQVGLVALEKLKHAARKKNMEAMLAKH 1755
            RVRQVGLVALEKLKHAARKK MEAML KH
Sbjct: 480  RVRQVGLVALEKLKHAARKKKMEAMLVKH 508


>XP_007029766.2 PREDICTED: RNA polymerase sigma factor sigA isoform X1 [Theobroma
            cacao]
          Length = 508

 Score =  785 bits (2028), Expect = 0.0
 Identities = 405/509 (79%), Positives = 448/509 (88%), Gaps = 1/509 (0%)
 Frame = +1

Query: 232  MMATAAVIGLSTGKRLLSSSFYYSDISEKLSYINDLGSANSQVGSTKNVVAAKKSSNYGP 411
            MMATAAVIGL+TGKRLLSSSF YSDI EKLSY ND GS++ Q  STK+++ AKKSSN   
Sbjct: 1    MMATAAVIGLTTGKRLLSSSFSYSDIIEKLSYANDYGSSHHQTSSTKSLIVAKKSSNCSQ 60

Query: 412  SFPSSNQQTQSTKALKEHAD-ASFAFTTEPWFEMFIDIEEESSELDYSVEALLLLQKSML 588
            S PSSN++ QS KALKEH D AS   T EP F+    +E ES +LDYSVEALLLLQKSML
Sbjct: 61   SLPSSNRRAQSIKALKEHVDSASIVSTAEPLFQGSNHLEVESYDLDYSVEALLLLQKSML 120

Query: 589  EKQWSLSFEGTVSTDSPSKKTHKKVPVTCSGVSARQRRMNSKKKILGHNKSAMQHNGTKQ 768
            EKQW+LSFE TV T+SPS+K HKK+PVTCSGVSARQRR N+K+KIL  NKS +Q N  KQ
Sbjct: 121  EKQWTLSFERTVFTESPSRKIHKKIPVTCSGVSARQRRFNTKRKILSQNKSIIQPNA-KQ 179

Query: 769  LRSMISPELIQNHLKGYVKGVISDELLTHAEVVRLSKKIKTGLSLDEHKSRLQERLGCEP 948
            LRS+ISPEL+Q+ LKGYVKGV+S+ELL+HAEVVRLSKKIK GLSL+EH+ RL+ERLGCEP
Sbjct: 180  LRSLISPELLQSRLKGYVKGVVSEELLSHAEVVRLSKKIKAGLSLEEHRLRLKERLGCEP 239

Query: 949  SVEQLAASLRISRPELQSIMMECSLAREKLVMRNVCLVLSIAQRYDNMGADMADLVQSGL 1128
            S EQLA SL+ISR EL+S ++ECSLAREKL M NV LV+SIAQRYDNMGA+M+DL+Q GL
Sbjct: 240  SDEQLATSLKISRAELRSKLIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMSDLIQGGL 299

Query: 1129 IGLLRGIEKFDSSKGYKISTYVYWWIRQGVSKALVENSRTLRLPNHLHERLGLIRNAKIR 1308
            IGLLRGIEKFDSSKGYKISTYVYWWIRQGVS+ALVENSRTLRLP HLHERLGLIRNAKIR
Sbjct: 300  IGLLRGIEKFDSSKGYKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKIR 359

Query: 1309 LKEKGITPSVDMIAEYLNMSQKKVRNATEAMCKVFSLDRQAFPSLNGLPGETHHSYIADN 1488
            L+EKGITP++D IAE LNMSQKKVRNATEA+ KVFSLDR AFPSLNGLPGETHHSYIADN
Sbjct: 360  LEEKGITPTIDRIAESLNMSQKKVRNATEAVSKVFSLDRDAFPSLNGLPGETHHSYIADN 419

Query: 1489 RVENNPWHGVDDWALKDEVNKLIMVTLAEREREIICLYYGLDKECLTWEDISKRIGLSRE 1668
             VEN PWHGVD+WALKDEVN+LI +TL EREREII LYYGLDKE LTWEDISKRIGLSRE
Sbjct: 420  HVENIPWHGVDEWALKDEVNRLITITLGEREREIIRLYYGLDKESLTWEDISKRIGLSRE 479

Query: 1669 RVRQVGLVALEKLKHAARKKNMEAMLAKH 1755
            RVRQVGLVALEKLKHAARKK MEAML KH
Sbjct: 480  RVRQVGLVALEKLKHAARKKKMEAMLVKH 508


>OAY41811.1 hypothetical protein MANES_09G130800 [Manihot esculenta] OAY41812.1
            hypothetical protein MANES_09G130800 [Manihot esculenta]
          Length = 509

 Score =  780 bits (2014), Expect = 0.0
 Identities = 396/509 (77%), Positives = 452/509 (88%), Gaps = 1/509 (0%)
 Frame = +1

Query: 232  MMATAAVIGLSTGKRLLSSSFYYSDISEKLSYINDLGSANSQVGSTKNVVAAKKSSNYGP 411
            MM TAAVIGLS GKRLLSSSFYYSD+++KL  +ND G  + Q+ STKNV+ AKKSSNYGP
Sbjct: 1    MMTTAAVIGLSAGKRLLSSSFYYSDLTDKLFNVNDHGLTHYQIASTKNVIGAKKSSNYGP 60

Query: 412  SFPSSNQQTQSTKALKEHAD-ASFAFTTEPWFEMFIDIEEESSELDYSVEALLLLQKSML 588
            ++PSSN+ TQS KALKEH D AS + TTE  F+ F DIEE+ S+LDYSVEALLLLQKSML
Sbjct: 61   TYPSSNRNTQSIKALKEHVDTASSSSTTETRFKTFHDIEEDISDLDYSVEALLLLQKSML 120

Query: 589  EKQWSLSFEGTVSTDSPSKKTHKKVPVTCSGVSARQRRMNSKKKILGHNKSAMQHNGTKQ 768
            EKQW+LSFE T S+DS ++K+ KK+PVTCSG+SARQRR+N+++K LG NK+ +Q +  KQ
Sbjct: 121  EKQWNLSFERTASSDSTNRKSEKKIPVTCSGLSARQRRINTRRKNLGQNKATVQASTFKQ 180

Query: 769  LRSMISPELIQNHLKGYVKGVISDELLTHAEVVRLSKKIKTGLSLDEHKSRLQERLGCEP 948
            L+S +SPEL+QN LKGYVKGV+S+ELLTHAEVVRLS+ IK GLSL++HKSRL+ERLGCEP
Sbjct: 181  LQSAVSPELLQNRLKGYVKGVVSEELLTHAEVVRLSRIIKAGLSLEDHKSRLKERLGCEP 240

Query: 949  SVEQLAASLRISRPELQSIMMECSLAREKLVMRNVCLVLSIAQRYDNMGADMADLVQSGL 1128
            S EQLA SLRISR ELQS ++ CSLAREKL M NV LV+SIAQRYD+MGA+MADLVQ GL
Sbjct: 241  SDEQLATSLRISRAELQSKLIACSLAREKLAMSNVRLVMSIAQRYDHMGAEMADLVQGGL 300

Query: 1129 IGLLRGIEKFDSSKGYKISTYVYWWIRQGVSKALVENSRTLRLPNHLHERLGLIRNAKIR 1308
            IGLLRGIEKFDSSKG+KISTYVYWWIRQGVS+ALV+NSRTLRLPNHLHERLGLIRNAKIR
Sbjct: 301  IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVDNSRTLRLPNHLHERLGLIRNAKIR 360

Query: 1309 LKEKGITPSVDMIAEYLNMSQKKVRNATEAMCKVFSLDRQAFPSLNGLPGETHHSYIADN 1488
            L+EKG+TPS+D IAE L MSQKKVRNATEA+ KVFSLDR+AFPSLNGLPGETHHSYIADN
Sbjct: 361  LEEKGVTPSIDRIAESLKMSQKKVRNATEAISKVFSLDREAFPSLNGLPGETHHSYIADN 420

Query: 1489 RVENNPWHGVDDWALKDEVNKLIMVTLAEREREIICLYYGLDKECLTWEDISKRIGLSRE 1668
             ++NNPWH VD+WALKDEVN+LI +TL EREREII LYYGLD E LTWEDISKRIGLSRE
Sbjct: 421  CLDNNPWHVVDEWALKDEVNRLIDLTLREREREIIRLYYGLDNESLTWEDISKRIGLSRE 480

Query: 1669 RVRQVGLVALEKLKHAARKKNMEAMLAKH 1755
            RVRQVGLVALEKLKHAARKK +EAML KH
Sbjct: 481  RVRQVGLVALEKLKHAARKKKLEAMLVKH 509


>XP_002524027.2 PREDICTED: RNA polymerase sigma factor sigA [Ricinus communis]
          Length = 509

 Score =  779 bits (2011), Expect = 0.0
 Identities = 398/509 (78%), Positives = 449/509 (88%), Gaps = 1/509 (0%)
 Frame = +1

Query: 232  MMATAAVIGLSTGKRLLSSSFYYSDISEKLSYINDLGSANSQVGSTKNVVAAKKSSNYGP 411
            MMATAAVIGLS GKRLLSS+FYYSD++EKLS  N+ G  + Q+ STK ++ AKKSSNYGP
Sbjct: 1    MMATAAVIGLSAGKRLLSSTFYYSDLTEKLSSANEHGLTHYQITSTKTLIVAKKSSNYGP 60

Query: 412  SFPSSNQQTQSTKALKEHAD-ASFAFTTEPWFEMFIDIEEESSELDYSVEALLLLQKSML 588
            SFPSSN+ TQS KALKEH D AS   T    F+ F D+EEESS+LDYSVEALLLLQKSML
Sbjct: 61   SFPSSNRNTQSIKALKEHVDTASAPSTAATQFKTFNDMEEESSDLDYSVEALLLLQKSML 120

Query: 589  EKQWSLSFEGTVSTDSPSKKTHKKVPVTCSGVSARQRRMNSKKKILGHNKSAMQHNGTKQ 768
            EKQW+LSFE T S+DSPS+K+ KK+PVTCSGVSARQRR+N ++K L  +K  +Q N  KQ
Sbjct: 121  EKQWNLSFERTDSSDSPSRKSQKKIPVTCSGVSARQRRINIRRKNLSQSKFTVQANVFKQ 180

Query: 769  LRSMISPELIQNHLKGYVKGVISDELLTHAEVVRLSKKIKTGLSLDEHKSRLQERLGCEP 948
            L+S +SPEL+QN LKGYVKGV+S+ELL+HAEVVRLS+ IK GLSL++HKSRL+ERLGC+P
Sbjct: 181  LKSAVSPELLQNRLKGYVKGVVSEELLSHAEVVRLSRIIKAGLSLEDHKSRLKERLGCDP 240

Query: 949  SVEQLAASLRISRPELQSIMMECSLAREKLVMRNVCLVLSIAQRYDNMGADMADLVQSGL 1128
            S EQ+A SL+ISR ELQS  + CSLAREKL M NV LV+SIAQRYDNMGA+MADLVQ GL
Sbjct: 241  SDEQVATSLKISRAELQSKSIACSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL 300

Query: 1129 IGLLRGIEKFDSSKGYKISTYVYWWIRQGVSKALVENSRTLRLPNHLHERLGLIRNAKIR 1308
            IGLLRGIEKFDSSKG++ISTYVYWWIRQGVS+ALVENSRTLRLPNHLHERLGLIRNAKIR
Sbjct: 301  IGLLRGIEKFDSSKGFRISTYVYWWIRQGVSRALVENSRTLRLPNHLHERLGLIRNAKIR 360

Query: 1309 LKEKGITPSVDMIAEYLNMSQKKVRNATEAMCKVFSLDRQAFPSLNGLPGETHHSYIADN 1488
            L+EKG+TPS+D IAE LN+SQKKVRNATEA+ KVFSLDR+AFPSLNGLPGETHHSYIADN
Sbjct: 361  LEEKGVTPSIDRIAESLNISQKKVRNATEAVSKVFSLDREAFPSLNGLPGETHHSYIADN 420

Query: 1489 RVENNPWHGVDDWALKDEVNKLIMVTLAEREREIICLYYGLDKECLTWEDISKRIGLSRE 1668
             +ENNPWHGVDDWALKDEVNKLI +TL ERE+EII LYYGLD E LTWEDISKRIGLSRE
Sbjct: 421  CLENNPWHGVDDWALKDEVNKLINLTLQEREQEIIRLYYGLDNESLTWEDISKRIGLSRE 480

Query: 1669 RVRQVGLVALEKLKHAARKKNMEAMLAKH 1755
            RVRQVGLVALEKLKHAARKK +EAML KH
Sbjct: 481  RVRQVGLVALEKLKHAARKKKLEAMLVKH 509


>EEF38395.1 RNA polymerase sigma factor rpoD, putative [Ricinus communis]
          Length = 508

 Score =  777 bits (2006), Expect = 0.0
 Identities = 397/508 (78%), Positives = 448/508 (88%), Gaps = 1/508 (0%)
 Frame = +1

Query: 235  MATAAVIGLSTGKRLLSSSFYYSDISEKLSYINDLGSANSQVGSTKNVVAAKKSSNYGPS 414
            MATAAVIGLS GKRLLSS+FYYSD++EKLS  N+ G  + Q+ STK ++ AKKSSNYGPS
Sbjct: 1    MATAAVIGLSAGKRLLSSTFYYSDLTEKLSSANEHGLTHYQITSTKTLIVAKKSSNYGPS 60

Query: 415  FPSSNQQTQSTKALKEHAD-ASFAFTTEPWFEMFIDIEEESSELDYSVEALLLLQKSMLE 591
            FPSSN+ TQS KALKEH D AS   T    F+ F D+EEESS+LDYSVEALLLLQKSMLE
Sbjct: 61   FPSSNRNTQSIKALKEHVDTASAPSTAATQFKTFNDMEEESSDLDYSVEALLLLQKSMLE 120

Query: 592  KQWSLSFEGTVSTDSPSKKTHKKVPVTCSGVSARQRRMNSKKKILGHNKSAMQHNGTKQL 771
            KQW+LSFE T S+DSPS+K+ KK+PVTCSGVSARQRR+N ++K L  +K  +Q N  KQL
Sbjct: 121  KQWNLSFERTDSSDSPSRKSQKKIPVTCSGVSARQRRINIRRKNLSQSKFTVQANVFKQL 180

Query: 772  RSMISPELIQNHLKGYVKGVISDELLTHAEVVRLSKKIKTGLSLDEHKSRLQERLGCEPS 951
            +S +SPEL+QN LKGYVKGV+S+ELL+HAEVVRLS+ IK GLSL++HKSRL+ERLGC+PS
Sbjct: 181  KSAVSPELLQNRLKGYVKGVVSEELLSHAEVVRLSRIIKAGLSLEDHKSRLKERLGCDPS 240

Query: 952  VEQLAASLRISRPELQSIMMECSLAREKLVMRNVCLVLSIAQRYDNMGADMADLVQSGLI 1131
             EQ+A SL+ISR ELQS  + CSLAREKL M NV LV+SIAQRYDNMGA+MADLVQ GLI
Sbjct: 241  DEQVATSLKISRAELQSKSIACSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI 300

Query: 1132 GLLRGIEKFDSSKGYKISTYVYWWIRQGVSKALVENSRTLRLPNHLHERLGLIRNAKIRL 1311
            GLLRGIEKFDSSKG++ISTYVYWWIRQGVS+ALVENSRTLRLPNHLHERLGLIRNAKIRL
Sbjct: 301  GLLRGIEKFDSSKGFRISTYVYWWIRQGVSRALVENSRTLRLPNHLHERLGLIRNAKIRL 360

Query: 1312 KEKGITPSVDMIAEYLNMSQKKVRNATEAMCKVFSLDRQAFPSLNGLPGETHHSYIADNR 1491
            +EKG+TPS+D IAE LN+SQKKVRNATEA+ KVFSLDR+AFPSLNGLPGETHHSYIADN 
Sbjct: 361  EEKGVTPSIDRIAESLNISQKKVRNATEAVSKVFSLDREAFPSLNGLPGETHHSYIADNC 420

Query: 1492 VENNPWHGVDDWALKDEVNKLIMVTLAEREREIICLYYGLDKECLTWEDISKRIGLSRER 1671
            +ENNPWHGVDDWALKDEVNKLI +TL ERE+EII LYYGLD E LTWEDISKRIGLSRER
Sbjct: 421  LENNPWHGVDDWALKDEVNKLINLTLQEREQEIIRLYYGLDNESLTWEDISKRIGLSRER 480

Query: 1672 VRQVGLVALEKLKHAARKKNMEAMLAKH 1755
            VRQVGLVALEKLKHAARKK +EAML KH
Sbjct: 481  VRQVGLVALEKLKHAARKKKLEAMLVKH 508


>OMP05985.1 RNA polymerase sigma-70 [Corchorus olitorius]
          Length = 507

 Score =  776 bits (2004), Expect = 0.0
 Identities = 398/507 (78%), Positives = 447/507 (88%), Gaps = 1/507 (0%)
 Frame = +1

Query: 235  MATAAVIGLSTGKRLLSSSFYYSDISEKLSYINDLGSANSQVGSTKNVVAAKKSSNYGPS 414
            MATAAVIGLSTGKRLLSSSF YSDI EKLSY ND G ++    STK+++ AKKSSN   S
Sbjct: 1    MATAAVIGLSTGKRLLSSSFSYSDIIEKLSYANDYGCSHHPTSSTKSLIVAKKSSNCSQS 60

Query: 415  FPSSNQQTQSTKALKEHADASFAFTT-EPWFEMFIDIEEESSELDYSVEALLLLQKSMLE 591
             PSSN++TQS KALKEH D++   +T EPWF+   D++EES +LDYSVEALLLLQKSMLE
Sbjct: 61   LPSSNRRTQSIKALKEHVDSATVISTAEPWFQGSNDLDEESYDLDYSVEALLLLQKSMLE 120

Query: 592  KQWSLSFEGTVSTDSPSKKTHKKVPVTCSGVSARQRRMNSKKKILGHNKSAMQHNGTKQL 771
            KQW+LSFE TV T+SPS+KT KK+PVTCSGVSARQRR+N+K+K+L   KS +Q +  KQL
Sbjct: 121  KQWTLSFERTVFTESPSRKTLKKIPVTCSGVSARQRRLNTKRKLLRQKKSVIQPSA-KQL 179

Query: 772  RSMISPELIQNHLKGYVKGVISDELLTHAEVVRLSKKIKTGLSLDEHKSRLQERLGCEPS 951
            RS+ISPEL+Q+ LKGYVKGV+S+ELL+HAEVVRLSKKIK GLSL++H+SRL ERLGCEPS
Sbjct: 180  RSLISPELLQSRLKGYVKGVVSEELLSHAEVVRLSKKIKVGLSLEDHRSRLTERLGCEPS 239

Query: 952  VEQLAASLRISRPELQSIMMECSLAREKLVMRNVCLVLSIAQRYDNMGADMADLVQSGLI 1131
             EQLA SL+I+R EL+S ++ECSLAREKL M NV LV+SIAQRYDNMGA+M+DL+Q GLI
Sbjct: 240  DEQLATSLKITRAELRSKVIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMSDLIQGGLI 299

Query: 1132 GLLRGIEKFDSSKGYKISTYVYWWIRQGVSKALVENSRTLRLPNHLHERLGLIRNAKIRL 1311
            GLLRGIEKFDSSKGYKISTYVYWWIRQGVS+ALVENSRTLRLP HLHERLGLIRNAK RL
Sbjct: 300  GLLRGIEKFDSSKGYKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKNRL 359

Query: 1312 KEKGITPSVDMIAEYLNMSQKKVRNATEAMCKVFSLDRQAFPSLNGLPGETHHSYIADNR 1491
            +EKGITP++D IAE LNMSQKKVRNATEA+ KVFSLDR AFPSLNGLPGETHHSYI DN 
Sbjct: 360  EEKGITPTIDRIAESLNMSQKKVRNATEAVSKVFSLDRDAFPSLNGLPGETHHSYIPDNH 419

Query: 1492 VENNPWHGVDDWALKDEVNKLIMVTLAEREREIICLYYGLDKECLTWEDISKRIGLSRER 1671
            VENNPWHGVDDWALKDEVN+LI +TL  REREII LYYGLDKE LTWEDISKRIGLSRER
Sbjct: 420  VENNPWHGVDDWALKDEVNRLITITLGIREREIIRLYYGLDKESLTWEDISKRIGLSRER 479

Query: 1672 VRQVGLVALEKLKHAARKKNMEAMLAK 1752
            VRQVGLVALEKLKHAARKK MEAML K
Sbjct: 480  VRQVGLVALEKLKHAARKKKMEAMLVK 506


>OMO87271.1 RNA polymerase sigma-70 [Corchorus capsularis]
          Length = 508

 Score =  774 bits (1999), Expect = 0.0
 Identities = 394/508 (77%), Positives = 446/508 (87%), Gaps = 1/508 (0%)
 Frame = +1

Query: 232  MMATAAVIGLSTGKRLLSSSFYYSDISEKLSYINDLGSANSQVGSTKNVVAAKKSSNYGP 411
            MMAT AVIGLSTGKRLLSSSF YSDI EKLSY ND G ++    STK+++ AKKSSN   
Sbjct: 1    MMATTAVIGLSTGKRLLSSSFSYSDIIEKLSYANDYGCSHHPTSSTKSLIVAKKSSNCSQ 60

Query: 412  SFPSSNQQTQSTKALKEHADASFAFTT-EPWFEMFIDIEEESSELDYSVEALLLLQKSML 588
            + PSSN++TQS KALKEH D++   +T EPWF+   D++EE+ +LDYSV+ALLLLQKSML
Sbjct: 61   NLPSSNRRTQSIKALKEHVDSATVISTAEPWFQGSNDLDEENYDLDYSVDALLLLQKSML 120

Query: 589  EKQWSLSFEGTVSTDSPSKKTHKKVPVTCSGVSARQRRMNSKKKILGHNKSAMQHNGTKQ 768
            EKQW+LSFE TV T+SP +KTHKK+PVTCSGVSARQRR+N+K+K+L  NKS +Q +  KQ
Sbjct: 121  EKQWTLSFERTVFTESPGRKTHKKIPVTCSGVSARQRRLNTKRKLLRQNKSVIQPSA-KQ 179

Query: 769  LRSMISPELIQNHLKGYVKGVISDELLTHAEVVRLSKKIKTGLSLDEHKSRLQERLGCEP 948
            LRS+ISPEL Q+ L GYVKGV+S+ELL+HAEVVRLSKKIK GLSL++H+SRL ERLGCEP
Sbjct: 180  LRSLISPELFQSRLNGYVKGVVSEELLSHAEVVRLSKKIKVGLSLEDHRSRLTERLGCEP 239

Query: 949  SVEQLAASLRISRPELQSIMMECSLAREKLVMRNVCLVLSIAQRYDNMGADMADLVQSGL 1128
            S EQLA SL+I+R EL+S ++ECSLAREKL M NV LV+SIAQRYDNMGA+M+DL+Q GL
Sbjct: 240  SDEQLATSLKITRAELRSKVIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMSDLIQGGL 299

Query: 1129 IGLLRGIEKFDSSKGYKISTYVYWWIRQGVSKALVENSRTLRLPNHLHERLGLIRNAKIR 1308
            IGLLRGIEKFDSSKGYKISTYVYWWIRQGVS+ALVENSRTLRLP HLHERLGLIRNAK R
Sbjct: 300  IGLLRGIEKFDSSKGYKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKNR 359

Query: 1309 LKEKGITPSVDMIAEYLNMSQKKVRNATEAMCKVFSLDRQAFPSLNGLPGETHHSYIADN 1488
            L+EKGITP++D IAE LNMSQKKVRNATEA+ KVFSLDR AFPSLNGLPGETHHSYI DN
Sbjct: 360  LEEKGITPTIDRIAESLNMSQKKVRNATEAVSKVFSLDRDAFPSLNGLPGETHHSYIPDN 419

Query: 1489 RVENNPWHGVDDWALKDEVNKLIMVTLAEREREIICLYYGLDKECLTWEDISKRIGLSRE 1668
             VENNPWHGVD+WALKDEVN+LI +TL EREREII LYYGLDK  LTWEDISKRIGLSRE
Sbjct: 420  HVENNPWHGVDEWALKDEVNRLITITLGEREREIIRLYYGLDKGSLTWEDISKRIGLSRE 479

Query: 1669 RVRQVGLVALEKLKHAARKKNMEAMLAK 1752
            RVRQVGLVALEKLKHAARKK MEAML K
Sbjct: 480  RVRQVGLVALEKLKHAARKKKMEAMLVK 507


>XP_011012457.1 PREDICTED: RNA polymerase sigma factor sigA [Populus euphratica]
            XP_011012458.1 PREDICTED: RNA polymerase sigma factor
            sigA [Populus euphratica]
          Length = 509

 Score =  770 bits (1989), Expect = 0.0
 Identities = 391/509 (76%), Positives = 445/509 (87%), Gaps = 1/509 (0%)
 Frame = +1

Query: 232  MMATAAVIGLSTGKRLLSSSFYYSDISEKLSYINDLGSANSQVGSTKNVVAAKKSSNYGP 411
            MMATAAVIGLSTGKRLLSSSFYYSD++EKLS +ND G       +TKNVV AKKSSNYGP
Sbjct: 1    MMATAAVIGLSTGKRLLSSSFYYSDLTEKLSSVNDHGITYCPTATTKNVVVAKKSSNYGP 60

Query: 412  SFPSSNQQTQSTKALKEHAD-ASFAFTTEPWFEMFIDIEEESSELDYSVEALLLLQKSML 588
            +FPSSN+ + S KALKEH D AS +     WF+ F D EEESS LDYSVEALLLLQKSML
Sbjct: 61   NFPSSNRNSHSIKALKEHVDTASASSNVATWFKTFDDFEEESSALDYSVEALLLLQKSML 120

Query: 589  EKQWSLSFEGTVSTDSPSKKTHKKVPVTCSGVSARQRRMNSKKKILGHNKSAMQHNGTKQ 768
            EKQW+LSFE T S+DS SKK +KK+PVTCSGVSARQRR+N+++K    +K   Q +  K 
Sbjct: 121  EKQWNLSFERTNSSDSTSKKNNKKIPVTCSGVSARQRRVNNRRKNQNQSKFMSQSSDFKF 180

Query: 769  LRSMISPELIQNHLKGYVKGVISDELLTHAEVVRLSKKIKTGLSLDEHKSRLQERLGCEP 948
            LRS+ISP+L+QN LKGYVKGV+SDE+L H EVVRLS+ I+ GLS ++HKSRL+ERLGCEP
Sbjct: 181  LRSVISPDLLQNRLKGYVKGVVSDEVLPHTEVVRLSRIIRAGLSFEDHKSRLKERLGCEP 240

Query: 949  SVEQLAASLRISRPELQSIMMECSLAREKLVMRNVCLVLSIAQRYDNMGADMADLVQSGL 1128
            S EQ+A SLRISR +LQ+ +++CSLAREKL M NV LV+SIAQ+YDNMGA+MADLVQ GL
Sbjct: 241  SDEQIADSLRISRADLQAKLIQCSLAREKLAMSNVRLVMSIAQKYDNMGAEMADLVQGGL 300

Query: 1129 IGLLRGIEKFDSSKGYKISTYVYWWIRQGVSKALVENSRTLRLPNHLHERLGLIRNAKIR 1308
            IGLLRGIEKFDSSKG+KISTYVYWWIRQGVS+ALV+NSRTLRLPNHLHERLGLIRNAKIR
Sbjct: 301  IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVDNSRTLRLPNHLHERLGLIRNAKIR 360

Query: 1309 LKEKGITPSVDMIAEYLNMSQKKVRNATEAMCKVFSLDRQAFPSLNGLPGETHHSYIADN 1488
            L+EKG+TPS+D IAE LNMSQ+KVRNATEA+ KVFSLDR+AFPSLNGLPGETHHSYIADN
Sbjct: 361  LEEKGVTPSIDRIAESLNMSQRKVRNATEAISKVFSLDREAFPSLNGLPGETHHSYIADN 420

Query: 1489 RVENNPWHGVDDWALKDEVNKLIMVTLAEREREIICLYYGLDKECLTWEDISKRIGLSRE 1668
            R ENNPWHGVD+WALK+EVNKLI  TL ERE+EII LY+GLD+ECLTWEDISKR+GLSRE
Sbjct: 421  RPENNPWHGVDEWALKEEVNKLIDSTLQEREKEIIRLYHGLDQECLTWEDISKRMGLSRE 480

Query: 1669 RVRQVGLVALEKLKHAARKKNMEAMLAKH 1755
            RVRQVGLVALEKLKHAARK+N EAML KH
Sbjct: 481  RVRQVGLVALEKLKHAARKRNTEAMLVKH 509


>XP_012492333.1 PREDICTED: RNA polymerase sigma factor sigA-like isoform X2
            [Gossypium raimondii] KJB44350.1 hypothetical protein
            B456_007G247500 [Gossypium raimondii]
          Length = 508

 Score =  770 bits (1988), Expect = 0.0
 Identities = 395/509 (77%), Positives = 442/509 (86%), Gaps = 1/509 (0%)
 Frame = +1

Query: 232  MMATAAVIGLSTGKRLLSSSFYYSDISEKLSYINDLGSANSQVGSTKNVVAAKKSSNYGP 411
            MMATAAVIGLSTGKRLLSSSF YS+  +KLSY  D GS+  Q  STK ++ AK+SSN   
Sbjct: 1    MMATAAVIGLSTGKRLLSSSFSYSETVDKLSYAGDYGSSYYQTPSTKTLMVAKRSSNCSQ 60

Query: 412  SFPSSNQQTQSTKALKEHAD-ASFAFTTEPWFEMFIDIEEESSELDYSVEALLLLQKSML 588
            + PSSN+ TQS KA KEH D AS   T EPW     D+E+ES +LDYSVEALLLLQKSML
Sbjct: 61   NLPSSNRHTQSIKAFKEHVDTASSISTVEPWIHGTNDLEQESYDLDYSVEALLLLQKSML 120

Query: 589  EKQWSLSFEGTVSTDSPSKKTHKKVPVTCSGVSARQRRMNSKKKILGHNKSAMQHNGTKQ 768
            EKQW+LSFE T+ T+SPS+KTH KVPVTCSGVSARQRR ++K+KIL  NKS +Q N  KQ
Sbjct: 121  EKQWTLSFERTMFTESPSRKTHNKVPVTCSGVSARQRRFSTKRKILSQNKSMIQPNA-KQ 179

Query: 769  LRSMISPELIQNHLKGYVKGVISDELLTHAEVVRLSKKIKTGLSLDEHKSRLQERLGCEP 948
            LRS+I PEL+QN LKGYVKGV+S++LL+HAEVVRLS+KIK GLSL+EH+ RL+ERLGCEP
Sbjct: 180  LRSLIGPELLQNRLKGYVKGVVSEDLLSHAEVVRLSRKIKAGLSLEEHRLRLKERLGCEP 239

Query: 949  SVEQLAASLRISRPELQSIMMECSLAREKLVMRNVCLVLSIAQRYDNMGADMADLVQSGL 1128
            S EQLA SL++SR EL+S  +ECSLAREKL M NV LV+SIAQRYDNMGA+M+DL+Q GL
Sbjct: 240  SDEQLATSLKVSRAELRSRSIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMSDLIQGGL 299

Query: 1129 IGLLRGIEKFDSSKGYKISTYVYWWIRQGVSKALVENSRTLRLPNHLHERLGLIRNAKIR 1308
            IGLLRGIEKFDSSKGYKISTYVYWWIRQGVS+ALVENSRTLRLP +LHERLGLIRNAK R
Sbjct: 300  IGLLRGIEKFDSSKGYKISTYVYWWIRQGVSRALVENSRTLRLPTYLHERLGLIRNAKYR 359

Query: 1309 LKEKGITPSVDMIAEYLNMSQKKVRNATEAMCKVFSLDRQAFPSLNGLPGETHHSYIADN 1488
            L+EKGITP++D IAE LNMSQKKVRNATEA+ KVFSLDR AFPSLNGLPGETHHSYIADN
Sbjct: 360  LEEKGITPTIDRIAESLNMSQKKVRNATEAVSKVFSLDRDAFPSLNGLPGETHHSYIADN 419

Query: 1489 RVENNPWHGVDDWALKDEVNKLIMVTLAEREREIICLYYGLDKECLTWEDISKRIGLSRE 1668
             VENNPWHGVD+WALKDEVN+LI +TL EREREII LY+GLDKE LTWEDISKRIGLSRE
Sbjct: 420  HVENNPWHGVDEWALKDEVNRLINITLGEREREIIRLYHGLDKESLTWEDISKRIGLSRE 479

Query: 1669 RVRQVGLVALEKLKHAARKKNMEAMLAKH 1755
            RVRQVGLVALEKLKHAARKK MEAML KH
Sbjct: 480  RVRQVGLVALEKLKHAARKKKMEAMLVKH 508


>XP_002325882.1 RNA POLYMERASE SIGMA SUBUNIT 1 family protein [Populus trichocarpa]
            EEF00264.1 RNA POLYMERASE SIGMA SUBUNIT 1 family protein
            [Populus trichocarpa]
          Length = 509

 Score =  768 bits (1983), Expect = 0.0
 Identities = 390/509 (76%), Positives = 444/509 (87%), Gaps = 1/509 (0%)
 Frame = +1

Query: 232  MMATAAVIGLSTGKRLLSSSFYYSDISEKLSYINDLGSANSQVGSTKNVVAAKKSSNYGP 411
            MMATAAVIGLS+GKRLLSSSFYYSD++EKLS +ND G       +TKNV+ AKKSSNYGP
Sbjct: 1    MMATAAVIGLSSGKRLLSSSFYYSDLTEKLSNVNDHGITYYPTATTKNVIVAKKSSNYGP 60

Query: 412  SFPSSNQQTQSTKALKEHAD-ASFAFTTEPWFEMFIDIEEESSELDYSVEALLLLQKSML 588
            SFPSSN+ + S KALKEH D AS +     WF+ F D EEESS LDYSVEALLLLQKSML
Sbjct: 61   SFPSSNRNSHSIKALKEHVDTASASSNVATWFKTFDDFEEESSALDYSVEALLLLQKSML 120

Query: 589  EKQWSLSFEGTVSTDSPSKKTHKKVPVTCSGVSARQRRMNSKKKILGHNKSAMQHNGTKQ 768
            EKQW+LSFE T S+DS SKK +KK+PVTCSGVSARQRR+N+++K    +K   Q +  K 
Sbjct: 121  EKQWNLSFERTNSSDSTSKKNNKKIPVTCSGVSARQRRVNNRRKNQNQSKFMSQSSDFKF 180

Query: 769  LRSMISPELIQNHLKGYVKGVISDELLTHAEVVRLSKKIKTGLSLDEHKSRLQERLGCEP 948
            LRS+ SP+L+QN LKGYVKGV+SDE+L H EVVRLS+ I+ GLS ++HKSRL+ERLGCEP
Sbjct: 181  LRSVSSPDLLQNRLKGYVKGVVSDEVLPHTEVVRLSRIIRAGLSFEDHKSRLKERLGCEP 240

Query: 949  SVEQLAASLRISRPELQSIMMECSLAREKLVMRNVCLVLSIAQRYDNMGADMADLVQSGL 1128
            S EQ+A SLRISR +LQS +++CSLAREKL M NV LV+SIAQ+YDNMGA+MADLVQ GL
Sbjct: 241  SDEQIADSLRISRADLQSKLIQCSLAREKLAMSNVRLVMSIAQKYDNMGAEMADLVQGGL 300

Query: 1129 IGLLRGIEKFDSSKGYKISTYVYWWIRQGVSKALVENSRTLRLPNHLHERLGLIRNAKIR 1308
            IGLLRGIEKFDSSKG+KISTYVYWWIRQGVS+ALV+NSRTLRLPNHLHERLGLIRNAKIR
Sbjct: 301  IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVDNSRTLRLPNHLHERLGLIRNAKIR 360

Query: 1309 LKEKGITPSVDMIAEYLNMSQKKVRNATEAMCKVFSLDRQAFPSLNGLPGETHHSYIADN 1488
            L+EKG+TPS+D IAE LNMSQ+KVRNATEA+ KVFSLDR+AFPSLNGLPGETHHSYIADN
Sbjct: 361  LEEKGVTPSIDRIAESLNMSQRKVRNATEAISKVFSLDREAFPSLNGLPGETHHSYIADN 420

Query: 1489 RVENNPWHGVDDWALKDEVNKLIMVTLAEREREIICLYYGLDKECLTWEDISKRIGLSRE 1668
            R ENNPWHGVD+WALK+EVNKLI  TL ERE+EII LY+GLD+ECLTWEDISKR+GLSRE
Sbjct: 421  RPENNPWHGVDEWALKEEVNKLIDSTLQEREKEIIRLYHGLDQECLTWEDISKRMGLSRE 480

Query: 1669 RVRQVGLVALEKLKHAARKKNMEAMLAKH 1755
            RVRQVGLVALEKLKHAARK+N EAML KH
Sbjct: 481  RVRQVGLVALEKLKHAARKRNTEAMLVKH 509


>XP_012070278.1 PREDICTED: RNA polymerase sigma factor sigA [Jatropha curcas]
            XP_012070279.1 PREDICTED: RNA polymerase sigma factor
            sigA [Jatropha curcas] KDP39565.1 hypothetical protein
            JCGZ_02585 [Jatropha curcas]
          Length = 508

 Score =  767 bits (1980), Expect = 0.0
 Identities = 392/508 (77%), Positives = 443/508 (87%), Gaps = 1/508 (0%)
 Frame = +1

Query: 235  MATAAVIGLSTGKRLLSSSFYYSDISEKLSYINDLGSANSQVGSTKNVVAAKKSSNYGPS 414
            MATAAVIGL  GKRLLSS+FYYSD++EKL  +ND G  + Q  STKNV+ AKKSSNYG S
Sbjct: 1    MATAAVIGLHAGKRLLSSTFYYSDLTEKLFNVNDHGLTHYQSSSTKNVIVAKKSSNYGSS 60

Query: 415  FPSSNQQTQSTKALKEHAD-ASFAFTTEPWFEMFIDIEEESSELDYSVEALLLLQKSMLE 591
            F SSN+  QS KALKEH D AS   T    FE F+DIEE SS+LDYSVEALLLLQKSMLE
Sbjct: 61   FQSSNRNAQSIKALKEHVDTASSPSTAATGFETFVDIEEASSDLDYSVEALLLLQKSMLE 120

Query: 592  KQWSLSFEGTVSTDSPSKKTHKKVPVTCSGVSARQRRMNSKKKILGHNKSAMQHNGTKQL 771
            KQW+LSFE T S+DSPS K+ K++P+TCSG+SARQRR+N+++K L  +KS +Q +G KQL
Sbjct: 121  KQWNLSFERTASSDSPSTKSQKQIPITCSGLSARQRRINTRRKNLIQSKSIVQASGFKQL 180

Query: 772  RSMISPELIQNHLKGYVKGVISDELLTHAEVVRLSKKIKTGLSLDEHKSRLQERLGCEPS 951
            +S +SPEL+ N LKGYVKG++S+ELLTHAEVV LS+ IK GLSL+EHKSRL++RLGC+PS
Sbjct: 181  KSAVSPELLLNRLKGYVKGIVSEELLTHAEVVSLSRIIKAGLSLEEHKSRLKDRLGCDPS 240

Query: 952  VEQLAASLRISRPELQSIMMECSLAREKLVMRNVCLVLSIAQRYDNMGADMADLVQSGLI 1131
             EQLA SLRIS  +L+S ++ CSLAREKL M NV LV+SIAQRYDNMGA+MADLVQ GLI
Sbjct: 241  DEQLATSLRISLADLRSKLIACSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI 300

Query: 1132 GLLRGIEKFDSSKGYKISTYVYWWIRQGVSKALVENSRTLRLPNHLHERLGLIRNAKIRL 1311
            GLLRGIEKFDSSKG+KISTYVYWWIRQGVS+ALVENSRTLRLPNHLHERLGLIRNAKIRL
Sbjct: 301  GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPNHLHERLGLIRNAKIRL 360

Query: 1312 KEKGITPSVDMIAEYLNMSQKKVRNATEAMCKVFSLDRQAFPSLNGLPGETHHSYIADNR 1491
            +EKG+TPS+D IAE LNMSQKKVRNATEA+ KVFSLDR+AFPSLNGLPGETHHSYIADN 
Sbjct: 361  EEKGVTPSIDRIAESLNMSQKKVRNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNC 420

Query: 1492 VENNPWHGVDDWALKDEVNKLIMVTLAEREREIICLYYGLDKECLTWEDISKRIGLSRER 1671
             ENNPWHGVD+WALKDEVNKLI +TL +REREII LYYGLD E LTWEDISKRIGLSRER
Sbjct: 421  PENNPWHGVDEWALKDEVNKLIDLTLQQREREIIRLYYGLDNETLTWEDISKRIGLSRER 480

Query: 1672 VRQVGLVALEKLKHAARKKNMEAMLAKH 1755
            VRQVGLVALEKLKHAARKK +EAML KH
Sbjct: 481  VRQVGLVALEKLKHAARKKKLEAMLVKH 508


>KDO48035.1 hypothetical protein CISIN_1g010521mg [Citrus sinensis]
          Length = 443

 Score =  763 bits (1971), Expect = 0.0
 Identities = 388/435 (89%), Positives = 408/435 (93%)
 Frame = +1

Query: 232  MMATAAVIGLSTGKRLLSSSFYYSDISEKLSYINDLGSANSQVGSTKNVVAAKKSSNYGP 411
            MMATAAVIGLS GKRLLSSSFYYSDISEK SYINDLGSANSQVGSTKNVVAAKKSSNY P
Sbjct: 1    MMATAAVIGLSAGKRLLSSSFYYSDISEKFSYINDLGSANSQVGSTKNVVAAKKSSNYNP 60

Query: 412  SFPSSNQQTQSTKALKEHADASFAFTTEPWFEMFIDIEEESSELDYSVEALLLLQKSMLE 591
            SFPSSN+QTQ  KALKEH D +FA T EPW E    IEEESSELDYSVEALLLLQKSMLE
Sbjct: 61   SFPSSNRQTQPIKALKEHVDTNFASTAEPWAEPPNSIEEESSELDYSVEALLLLQKSMLE 120

Query: 592  KQWSLSFEGTVSTDSPSKKTHKKVPVTCSGVSARQRRMNSKKKILGHNKSAMQHNGTKQL 771
            KQW+LSFE TV TDSPSKKTHKKVPVTCSGVSARQRR+NSKKKIL  NKS +Q NG+KQL
Sbjct: 121  KQWNLSFERTVLTDSPSKKTHKKVPVTCSGVSARQRRLNSKKKILSQNKSILQQNGSKQL 180

Query: 772  RSMISPELIQNHLKGYVKGVISDELLTHAEVVRLSKKIKTGLSLDEHKSRLQERLGCEPS 951
            RSMISPELIQN LKGYVKGV+S+ELLTHAEVVRLSKKIKTGLSLD+HK RL+ERLGCEPS
Sbjct: 181  RSMISPELIQNRLKGYVKGVVSEELLTHAEVVRLSKKIKTGLSLDDHKLRLKERLGCEPS 240

Query: 952  VEQLAASLRISRPELQSIMMECSLAREKLVMRNVCLVLSIAQRYDNMGADMADLVQSGLI 1131
            +EQLAASLRISRPELQSI+MECSLAREKLVM NV LV+SIAQRYDNMGADMADLVQ GLI
Sbjct: 241  MEQLAASLRISRPELQSILMECSLAREKLVMSNVRLVMSIAQRYDNMGADMADLVQGGLI 300

Query: 1132 GLLRGIEKFDSSKGYKISTYVYWWIRQGVSKALVENSRTLRLPNHLHERLGLIRNAKIRL 1311
            GLLRGIEKFDSSKG+KISTYVYWWIRQGVS+ALVENSRTLRLPNHLHERLGLIRNAK+RL
Sbjct: 301  GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPNHLHERLGLIRNAKLRL 360

Query: 1312 KEKGITPSVDMIAEYLNMSQKKVRNATEAMCKVFSLDRQAFPSLNGLPGETHHSYIADNR 1491
            +EKG+TPSVD IAEYLNMSQKKVRNATEA+ KVFSLDR+AFPSLNGLPGETHHSYIADNR
Sbjct: 361  EEKGVTPSVDRIAEYLNMSQKKVRNATEAIGKVFSLDREAFPSLNGLPGETHHSYIADNR 420

Query: 1492 VENNPWHGVDDWALK 1536
            VENNPWHGVDDWALK
Sbjct: 421  VENNPWHGVDDWALK 435


>XP_016671610.1 PREDICTED: RNA polymerase sigma factor sigA-like [Gossypium hirsutum]
            XP_016671617.1 PREDICTED: RNA polymerase sigma factor
            sigA-like [Gossypium hirsutum]
          Length = 508

 Score =  763 bits (1970), Expect = 0.0
 Identities = 394/509 (77%), Positives = 438/509 (86%), Gaps = 1/509 (0%)
 Frame = +1

Query: 232  MMATAAVIGLSTGKRLLSSSFYYSDISEKLSYINDLGSANSQVGSTKNVVAAKKSSNYGP 411
            MMATAAVIGLSTGKRLLSSSF YS+  +KLSY  D GS+  Q  STK ++ AK+SSN   
Sbjct: 1    MMATAAVIGLSTGKRLLSSSFSYSETVDKLSYAGDYGSSYYQTPSTKTLIVAKRSSNCSQ 60

Query: 412  SFPSSNQQTQSTKALKEHAD-ASFAFTTEPWFEMFIDIEEESSELDYSVEALLLLQKSML 588
            + PSSN+ TQS KA K H D AS   T EPW     D+E+ES +LD SVEALLLLQKSML
Sbjct: 61   NLPSSNRHTQSIKAFKGHVDTASSISTVEPWIHGANDLEQESYDLDCSVEALLLLQKSML 120

Query: 589  EKQWSLSFEGTVSTDSPSKKTHKKVPVTCSGVSARQRRMNSKKKILGHNKSAMQHNGTKQ 768
            EKQW+LSFE T+  +SPS+KTH KVPVTCSGVSARQRR N+K+KIL  NKS +Q N  KQ
Sbjct: 121  EKQWTLSFERTMFIESPSRKTHSKVPVTCSGVSARQRRFNTKRKILSQNKSMIQPNA-KQ 179

Query: 769  LRSMISPELIQNHLKGYVKGVISDELLTHAEVVRLSKKIKTGLSLDEHKSRLQERLGCEP 948
            LRS+I PEL+QN LKGYVKGV+S++LL+HAEVVRLSKKIK GLSL+EH  RL+ERLGCEP
Sbjct: 180  LRSLIGPELLQNRLKGYVKGVVSEDLLSHAEVVRLSKKIKAGLSLEEHILRLKERLGCEP 239

Query: 949  SVEQLAASLRISRPELQSIMMECSLAREKLVMRNVCLVLSIAQRYDNMGADMADLVQSGL 1128
            S EQLA SL++SR EL+S  +ECSLAREKL M NV LV+SIAQRYDNMGA+M+DL+Q GL
Sbjct: 240  SDEQLATSLKVSRAELRSRSIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMSDLIQGGL 299

Query: 1129 IGLLRGIEKFDSSKGYKISTYVYWWIRQGVSKALVENSRTLRLPNHLHERLGLIRNAKIR 1308
            IGLLRGIEKFDSSKGYKISTYVYWWIRQGVS+ALVENSRTLRLP +LHERLGLIRNAK R
Sbjct: 300  IGLLRGIEKFDSSKGYKISTYVYWWIRQGVSRALVENSRTLRLPTYLHERLGLIRNAKYR 359

Query: 1309 LKEKGITPSVDMIAEYLNMSQKKVRNATEAMCKVFSLDRQAFPSLNGLPGETHHSYIADN 1488
            L+EKGITP++D IAE LNMSQKKVRNATEA+ KVFSLDR AFPSLNGLPGETHHSYIADN
Sbjct: 360  LEEKGITPTIDRIAESLNMSQKKVRNATEAVSKVFSLDRDAFPSLNGLPGETHHSYIADN 419

Query: 1489 RVENNPWHGVDDWALKDEVNKLIMVTLAEREREIICLYYGLDKECLTWEDISKRIGLSRE 1668
             VENNPWHGVD+WALKDEVN+LI +TL EREREII LY+GLDKE LTWEDISKRIGLSRE
Sbjct: 420  HVENNPWHGVDEWALKDEVNRLIDITLGEREREIIRLYHGLDKESLTWEDISKRIGLSRE 479

Query: 1669 RVRQVGLVALEKLKHAARKKNMEAMLAKH 1755
            RVRQVGLVALEKLKHAARKK MEAML KH
Sbjct: 480  RVRQVGLVALEKLKHAARKKKMEAMLVKH 508


>XP_016697692.1 PREDICTED: RNA polymerase sigma factor sigA-like isoform X2
            [Gossypium hirsutum]
          Length = 508

 Score =  761 bits (1965), Expect = 0.0
 Identities = 394/509 (77%), Positives = 439/509 (86%), Gaps = 1/509 (0%)
 Frame = +1

Query: 232  MMATAAVIGLSTGKRLLSSSFYYSDISEKLSYINDLGSANSQVGSTKNVVAAKKSSNYGP 411
            MMATAAVIGLSTGKRLLSSSF YS+  +KLSY  D GS+  Q  STK ++ AK+SSN   
Sbjct: 1    MMATAAVIGLSTGKRLLSSSFSYSETVDKLSYAGDYGSSYYQTPSTKTLMVAKRSSNCSQ 60

Query: 412  SFPSSNQQTQSTKALKEHAD-ASFAFTTEPWFEMFIDIEEESSELDYSVEALLLLQKSML 588
            + PSSN+ TQS KA KEH D AS   T EPW     D+E+ES +LDYSVEALLLLQKSML
Sbjct: 61   NLPSSNRHTQSIKAFKEHVDTASSISTVEPWIHGTNDLEQESYDLDYSVEALLLLQKSML 120

Query: 589  EKQWSLSFEGTVSTDSPSKKTHKKVPVTCSGVSARQRRMNSKKKILGHNKSAMQHNGTKQ 768
            EKQW+LSFE T+ T+SPS+KTH KVPVTCSGVSARQRR N+K+KIL  NKS +Q N  KQ
Sbjct: 121  EKQWTLSFERTMFTESPSRKTHNKVPVTCSGVSARQRRFNTKRKILSQNKSMIQPNA-KQ 179

Query: 769  LRSMISPELIQNHLKGYVKGVISDELLTHAEVVRLSKKIKTGLSLDEHKSRLQERLGCEP 948
            LRS+I PEL+QN LKGYVKGV+S++LL+H EVVRLSKKIK GLSL+EH+ RL+ERLGCEP
Sbjct: 180  LRSLIGPELLQNRLKGYVKGVVSEDLLSHGEVVRLSKKIKAGLSLEEHRLRLKERLGCEP 239

Query: 949  SVEQLAASLRISRPELQSIMMECSLAREKLVMRNVCLVLSIAQRYDNMGADMADLVQSGL 1128
            S EQLA SL++SR EL+S  +ECSLAREKL M NV LV+SIAQRYDNMGA+M+DL+Q GL
Sbjct: 240  SDEQLATSLKVSRAELRSRSIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMSDLIQGGL 299

Query: 1129 IGLLRGIEKFDSSKGYKISTYVYWWIRQGVSKALVENSRTLRLPNHLHERLGLIRNAKIR 1308
            IGLLRGIEKFDSSKGYKISTYVY  IRQGVS+ALVENSRTLRLP +LHERLGLIRNAK R
Sbjct: 300  IGLLRGIEKFDSSKGYKISTYVYLVIRQGVSRALVENSRTLRLPTYLHERLGLIRNAKYR 359

Query: 1309 LKEKGITPSVDMIAEYLNMSQKKVRNATEAMCKVFSLDRQAFPSLNGLPGETHHSYIADN 1488
            L+EKGITP++D IAE LNMSQKKVRNATEA+ KVFSLDR AFPSLNGLPGETHHSYIADN
Sbjct: 360  LEEKGITPTIDRIAESLNMSQKKVRNATEAVSKVFSLDRDAFPSLNGLPGETHHSYIADN 419

Query: 1489 RVENNPWHGVDDWALKDEVNKLIMVTLAEREREIICLYYGLDKECLTWEDISKRIGLSRE 1668
             VENNPWHGVD+WALKDEVN+LI +TL EREREII LY+GLDKE LTWEDISKRIGLSRE
Sbjct: 420  HVENNPWHGVDEWALKDEVNRLINITLGEREREIIRLYHGLDKESLTWEDISKRIGLSRE 479

Query: 1669 RVRQVGLVALEKLKHAARKKNMEAMLAKH 1755
            RVRQVGLVALEKLKHAARKK MEAML KH
Sbjct: 480  RVRQVGLVALEKLKHAARKKKMEAMLVKH 508


>XP_017630518.1 PREDICTED: RNA polymerase sigma factor sigA-like isoform X1
            [Gossypium arboreum] XP_017630519.1 PREDICTED: RNA
            polymerase sigma factor sigA-like isoform X1 [Gossypium
            arboreum] KHG03684.1 RNA polymerase sigma factor rpoD
            [Gossypium arboreum] KHG18047.1 RNA polymerase sigma
            factor rpoD [Gossypium arboreum]
          Length = 508

 Score =  761 bits (1964), Expect = 0.0
 Identities = 393/509 (77%), Positives = 437/509 (85%), Gaps = 1/509 (0%)
 Frame = +1

Query: 232  MMATAAVIGLSTGKRLLSSSFYYSDISEKLSYINDLGSANSQVGSTKNVVAAKKSSNYGP 411
            MMATAAVIGLSTGKRLLSSSF YS+  +KLSY  D GS+  Q  STK ++ AK+SSN   
Sbjct: 1    MMATAAVIGLSTGKRLLSSSFSYSETVDKLSYAGDYGSSYYQTPSTKTLIVAKRSSNCSQ 60

Query: 412  SFPSSNQQTQSTKALKEHAD-ASFAFTTEPWFEMFIDIEEESSELDYSVEALLLLQKSML 588
            + PSSN+ TQ  KA K H D AS   T EPW     D+E+ES +LD SVEALLLLQKSML
Sbjct: 61   NLPSSNRHTQLIKAFKGHVDTASSISTVEPWIHGANDLEQESYDLDCSVEALLLLQKSML 120

Query: 589  EKQWSLSFEGTVSTDSPSKKTHKKVPVTCSGVSARQRRMNSKKKILGHNKSAMQHNGTKQ 768
            EKQW+LSFE T+  +SPS+KTH KVPVTCSGVSARQRR N+K+KIL  NKS +Q N  KQ
Sbjct: 121  EKQWTLSFERTMFIESPSRKTHSKVPVTCSGVSARQRRFNTKRKILSQNKSMIQPNA-KQ 179

Query: 769  LRSMISPELIQNHLKGYVKGVISDELLTHAEVVRLSKKIKTGLSLDEHKSRLQERLGCEP 948
            LRS+I PEL+QN LKGYVKGV+S++LL+HAEVVRLSKKIK GLSL+EH  RL+ERLGCEP
Sbjct: 180  LRSLIGPELLQNRLKGYVKGVVSEDLLSHAEVVRLSKKIKAGLSLEEHILRLKERLGCEP 239

Query: 949  SVEQLAASLRISRPELQSIMMECSLAREKLVMRNVCLVLSIAQRYDNMGADMADLVQSGL 1128
            S EQLA SL++SR EL+S  +ECSLAREKL M NV LV+SIAQRYDNMGA+M+DL+Q GL
Sbjct: 240  SDEQLATSLKVSRAELRSRSIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMSDLIQGGL 299

Query: 1129 IGLLRGIEKFDSSKGYKISTYVYWWIRQGVSKALVENSRTLRLPNHLHERLGLIRNAKIR 1308
            IGLLRGIEKFDSSKGYKISTYVYWWIRQGVS+ALVENSRTLRLP +LHERLGLIRNAK R
Sbjct: 300  IGLLRGIEKFDSSKGYKISTYVYWWIRQGVSRALVENSRTLRLPTYLHERLGLIRNAKYR 359

Query: 1309 LKEKGITPSVDMIAEYLNMSQKKVRNATEAMCKVFSLDRQAFPSLNGLPGETHHSYIADN 1488
            L+EKGITP++D IAE LNMSQKKVRNATEA+ KVFSLDR AFPSLNGLPGETHHSYIADN
Sbjct: 360  LEEKGITPTIDRIAESLNMSQKKVRNATEAVSKVFSLDRDAFPSLNGLPGETHHSYIADN 419

Query: 1489 RVENNPWHGVDDWALKDEVNKLIMVTLAEREREIICLYYGLDKECLTWEDISKRIGLSRE 1668
             VENNPWHGVD+WALKDEVN+LI +TL EREREII LY+GLDKE LTWEDISKRIGLSRE
Sbjct: 420  HVENNPWHGVDEWALKDEVNRLIDITLGEREREIIRLYHGLDKESLTWEDISKRIGLSRE 479

Query: 1669 RVRQVGLVALEKLKHAARKKNMEAMLAKH 1755
            RVRQVGLVALEKLKHAARKK MEAML KH
Sbjct: 480  RVRQVGLVALEKLKHAARKKKMEAMLVKH 508