BLASTX nr result
ID: Phellodendron21_contig00004900
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Phellodendron21_contig00004900
(1774 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KDO48032.1 hypothetical protein CISIN_1g010521mg [Citrus sinensi... 733 0.0
XP_006484698.1 PREDICTED: RNA polymerase sigma factor sigA [Citr... 729 0.0
XP_006437403.1 hypothetical protein CICLE_v10031289mg [Citrus cl... 729 0.0
KDO48034.1 hypothetical protein CISIN_1g010521mg [Citrus sinensis] 708 0.0
XP_007029766.2 PREDICTED: RNA polymerase sigma factor sigA isofo... 673 0.0
KDO48031.1 hypothetical protein CISIN_1g010521mg [Citrus sinensis] 671 0.0
EOY10268.1 Sigma factor A isoform 1 [Theobroma cacao] 672 0.0
XP_012492333.1 PREDICTED: RNA polymerase sigma factor sigA-like ... 664 0.0
XP_016671610.1 PREDICTED: RNA polymerase sigma factor sigA-like ... 662 0.0
XP_017630518.1 PREDICTED: RNA polymerase sigma factor sigA-like ... 662 0.0
OMO87271.1 RNA polymerase sigma-70 [Corchorus capsularis] 658 0.0
OMP05985.1 RNA polymerase sigma-70 [Corchorus olitorius] 656 0.0
XP_016697692.1 PREDICTED: RNA polymerase sigma factor sigA-like ... 655 0.0
EEF38395.1 RNA polymerase sigma factor rpoD, putative [Ricinus c... 650 0.0
XP_002524027.2 PREDICTED: RNA polymerase sigma factor sigA [Rici... 650 0.0
XP_012492331.1 PREDICTED: RNA polymerase sigma factor sigA-like ... 649 0.0
XP_012070278.1 PREDICTED: RNA polymerase sigma factor sigA [Jatr... 648 0.0
XP_017630520.1 PREDICTED: RNA polymerase sigma factor sigA-like ... 647 0.0
OAY41811.1 hypothetical protein MANES_09G130800 [Manihot esculen... 647 0.0
AKC88633.1 sigma factor [Melianthus villosus] 645 0.0
>KDO48032.1 hypothetical protein CISIN_1g010521mg [Citrus sinensis] KDO48033.1
hypothetical protein CISIN_1g010521mg [Citrus sinensis]
Length = 508
Score = 733 bits (1891), Expect = 0.0
Identities = 369/394 (93%), Positives = 384/394 (97%)
Frame = -2
Query: 1428 QKSMLEKQWNLSFERTVLTDSQSKKTHKKVPVTCSGVSARQRRMNTKKKILSHSKSVMQH 1249
QKSMLEKQWNLSFERTVLTDS SKKTHKKVPVTCSGVSARQRR+N+KKKILS +KS++Q
Sbjct: 115 QKSMLEKQWNLSFERTVLTDSPSKKTHKKVPVTCSGVSARQRRLNSKKKILSQNKSILQQ 174
Query: 1248 YGSKQLRSMISPELIQNRLKGYVKGVVSDELLTHAEVVRLSKKIKTGLSLDEHKLRLKER 1069
GSKQLRSMISPELIQNRLKGYVKGVVS+ELLTHAEVVRLSKKIKTGLSLD+HKLRLKER
Sbjct: 175 NGSKQLRSMISPELIQNRLKGYVKGVVSEELLTHAEVVRLSKKIKTGLSLDDHKLRLKER 234
Query: 1068 LGCEPSVEQFAASLRISRPELQSITMECSLAREKLVMSNVRLVMSIAQRYDNMGADMADL 889
LGCEPS+EQ AASLRISRPELQSI MECSLAREKLVMSNVRLVMSIAQRYDNMGADMADL
Sbjct: 235 LGCEPSMEQLAASLRISRPELQSILMECSLAREKLVMSNVRLVMSIAQRYDNMGADMADL 294
Query: 888 VQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSKALVENSRTVRLPNHLHERLGLIR 709
VQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVS+ALVENSRT+RLPNHLHERLGLIR
Sbjct: 295 VQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPNHLHERLGLIR 354
Query: 708 NAKIKLEEKGVTPSVDRIAEYLNMTQKKVRNATEAMSKVFSLDREAFPSLNGLPGETHHS 529
NAK++LEEKGVTPSVDRIAEYLNM+QKKVRNATEA+ KVFSLDREAFPSLNGLPGETHHS
Sbjct: 355 NAKLRLEEKGVTPSVDRIAEYLNMSQKKVRNATEAIGKVFSLDREAFPSLNGLPGETHHS 414
Query: 528 YIADKRVENNPWHGVDEWALKDEVNKLITVTLGEREREIIHLYYGLDKECLTWEDISKRI 349
YIAD RVENNPWHGVD+WALKDEVNKLI VTLGEREREII LYYGLDKECLTWEDISKRI
Sbjct: 415 YIADNRVENNPWHGVDDWALKDEVNKLIIVTLGEREREIIRLYYGLDKECLTWEDISKRI 474
Query: 348 GLSRERVRQVGLVALEKLKHAARKKKMEAMLVKH 247
GLSRERVRQVGLVALEKLKHAARKKKMEAMLVKH
Sbjct: 475 GLSRERVRQVGLVALEKLKHAARKKKMEAMLVKH 508
>XP_006484698.1 PREDICTED: RNA polymerase sigma factor sigA [Citrus sinensis]
XP_006484699.1 PREDICTED: RNA polymerase sigma factor
sigA [Citrus sinensis] XP_006484700.1 PREDICTED: RNA
polymerase sigma factor sigA [Citrus sinensis]
Length = 508
Score = 729 bits (1883), Expect = 0.0
Identities = 369/394 (93%), Positives = 382/394 (96%)
Frame = -2
Query: 1428 QKSMLEKQWNLSFERTVLTDSQSKKTHKKVPVTCSGVSARQRRMNTKKKILSHSKSVMQH 1249
QKSMLEKQWNLSFERTVLTDS SKKTHKKVPVTCSGVSARQRR+N+KKKILS +KSV Q
Sbjct: 115 QKSMLEKQWNLSFERTVLTDSPSKKTHKKVPVTCSGVSARQRRLNSKKKILSQNKSVPQQ 174
Query: 1248 YGSKQLRSMISPELIQNRLKGYVKGVVSDELLTHAEVVRLSKKIKTGLSLDEHKLRLKER 1069
GSKQLRSMISPELIQN LKGYVKGVVS+ELLTHAEVVRLSKKIKTGLSLD+HKLRLKER
Sbjct: 175 NGSKQLRSMISPELIQNHLKGYVKGVVSEELLTHAEVVRLSKKIKTGLSLDDHKLRLKER 234
Query: 1068 LGCEPSVEQFAASLRISRPELQSITMECSLAREKLVMSNVRLVMSIAQRYDNMGADMADL 889
LGCEPS+EQ AASLRISRPELQSI MECSLAREKLVMSNVRLVMSIAQRYDNMGADMADL
Sbjct: 235 LGCEPSMEQLAASLRISRPELQSILMECSLAREKLVMSNVRLVMSIAQRYDNMGADMADL 294
Query: 888 VQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSKALVENSRTVRLPNHLHERLGLIR 709
VQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVS+ALVENSRT+RLPNHLHERLGLIR
Sbjct: 295 VQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPNHLHERLGLIR 354
Query: 708 NAKIKLEEKGVTPSVDRIAEYLNMTQKKVRNATEAMSKVFSLDREAFPSLNGLPGETHHS 529
NAK++LEEKGVTPSVDRIAEYLNM+QKKVRNATEA+ KVFSLDREAFPSLNGLPGETHHS
Sbjct: 355 NAKLRLEEKGVTPSVDRIAEYLNMSQKKVRNATEAIGKVFSLDREAFPSLNGLPGETHHS 414
Query: 528 YIADKRVENNPWHGVDEWALKDEVNKLITVTLGEREREIIHLYYGLDKECLTWEDISKRI 349
YIAD RVENNPWHGVD+WALKDEVNKLI VTLGEREREII LYYGLDKECLTWEDISKRI
Sbjct: 415 YIADNRVENNPWHGVDDWALKDEVNKLIIVTLGEREREIIRLYYGLDKECLTWEDISKRI 474
Query: 348 GLSRERVRQVGLVALEKLKHAARKKKMEAMLVKH 247
GLSRERVRQVGLVALEKLKHAARKKKMEAMLVKH
Sbjct: 475 GLSRERVRQVGLVALEKLKHAARKKKMEAMLVKH 508
>XP_006437403.1 hypothetical protein CICLE_v10031289mg [Citrus clementina] ESR50643.1
hypothetical protein CICLE_v10031289mg [Citrus
clementina]
Length = 508
Score = 729 bits (1883), Expect = 0.0
Identities = 367/394 (93%), Positives = 383/394 (97%)
Frame = -2
Query: 1428 QKSMLEKQWNLSFERTVLTDSQSKKTHKKVPVTCSGVSARQRRMNTKKKILSHSKSVMQH 1249
QKSMLEKQWNLSFERTVLTDS SKKTHKKVPVTCSGVSARQRR+N+KKKILS +KSV+Q
Sbjct: 115 QKSMLEKQWNLSFERTVLTDSPSKKTHKKVPVTCSGVSARQRRLNSKKKILSQNKSVLQQ 174
Query: 1248 YGSKQLRSMISPELIQNRLKGYVKGVVSDELLTHAEVVRLSKKIKTGLSLDEHKLRLKER 1069
GSKQLRSMISPELIQN LKGYVKGVVS+ELLTHAEVVRLSKKIKTGLSLD+HKLRLKER
Sbjct: 175 NGSKQLRSMISPELIQNHLKGYVKGVVSEELLTHAEVVRLSKKIKTGLSLDDHKLRLKER 234
Query: 1068 LGCEPSVEQFAASLRISRPELQSITMECSLAREKLVMSNVRLVMSIAQRYDNMGADMADL 889
LGCEPS+EQ AASLRISRPELQSI MECSLAREKLVMSNVRLVMSIAQRYDNMGADMADL
Sbjct: 235 LGCEPSMEQLAASLRISRPELQSILMECSLAREKLVMSNVRLVMSIAQRYDNMGADMADL 294
Query: 888 VQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSKALVENSRTVRLPNHLHERLGLIR 709
+QGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVS+ALVENSRT+RLPNHLHERLGLIR
Sbjct: 295 IQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPNHLHERLGLIR 354
Query: 708 NAKIKLEEKGVTPSVDRIAEYLNMTQKKVRNATEAMSKVFSLDREAFPSLNGLPGETHHS 529
NAK++LEEKGVTP+VDRIAEYLNM+QKKVRNATEA+ KVFSLDREAFPSLNGLPGETHHS
Sbjct: 355 NAKLRLEEKGVTPAVDRIAEYLNMSQKKVRNATEAIGKVFSLDREAFPSLNGLPGETHHS 414
Query: 528 YIADKRVENNPWHGVDEWALKDEVNKLITVTLGEREREIIHLYYGLDKECLTWEDISKRI 349
YIAD RVENNPWHGVD+WALKDEVNKLI VTLGEREREII LYYGLDKECLTWEDISKRI
Sbjct: 415 YIADNRVENNPWHGVDDWALKDEVNKLIIVTLGEREREIIRLYYGLDKECLTWEDISKRI 474
Query: 348 GLSRERVRQVGLVALEKLKHAARKKKMEAMLVKH 247
GLSRERVRQVGLVALEKLKHAARKKKMEAMLVKH
Sbjct: 475 GLSRERVRQVGLVALEKLKHAARKKKMEAMLVKH 508
>KDO48034.1 hypothetical protein CISIN_1g010521mg [Citrus sinensis]
Length = 499
Score = 708 bits (1828), Expect = 0.0
Identities = 361/394 (91%), Positives = 376/394 (95%)
Frame = -2
Query: 1428 QKSMLEKQWNLSFERTVLTDSQSKKTHKKVPVTCSGVSARQRRMNTKKKILSHSKSVMQH 1249
QKSMLEKQWNLSFERTVLTDS SKKTHKKVPVTCSGVSARQRR+N+KKKILS +KS++Q
Sbjct: 115 QKSMLEKQWNLSFERTVLTDSPSKKTHKKVPVTCSGVSARQRRLNSKKKILSQNKSILQQ 174
Query: 1248 YGSKQLRSMISPELIQNRLKGYVKGVVSDELLTHAEVVRLSKKIKTGLSLDEHKLRLKER 1069
GSKQLRSMISPELIQNRLKGYVKGVVS+ELLTHAEVVRLSKKIKTGLSLD+HKLRLKER
Sbjct: 175 NGSKQLRSMISPELIQNRLKGYVKGVVSEELLTHAEVVRLSKKIKTGLSLDDHKLRLKER 234
Query: 1068 LGCEPSVEQFAASLRISRPELQSITMECSLAREKLVMSNVRLVMSIAQRYDNMGADMADL 889
LG +SLRISRPELQSI MECSLAREKLVMSNVRLVMSIAQRYDNMGADMADL
Sbjct: 235 LG---------SSLRISRPELQSILMECSLAREKLVMSNVRLVMSIAQRYDNMGADMADL 285
Query: 888 VQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSKALVENSRTVRLPNHLHERLGLIR 709
VQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVS+ALVENSRT+RLPNHLHERLGLIR
Sbjct: 286 VQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPNHLHERLGLIR 345
Query: 708 NAKIKLEEKGVTPSVDRIAEYLNMTQKKVRNATEAMSKVFSLDREAFPSLNGLPGETHHS 529
NAK++LEEKGVTPSVDRIAEYLNM+QKKVRNATEA+ KVFSLDREAFPSLNGLPGETHHS
Sbjct: 346 NAKLRLEEKGVTPSVDRIAEYLNMSQKKVRNATEAIGKVFSLDREAFPSLNGLPGETHHS 405
Query: 528 YIADKRVENNPWHGVDEWALKDEVNKLITVTLGEREREIIHLYYGLDKECLTWEDISKRI 349
YIAD RVENNPWHGVD+WALKDEVNKLI VTLGEREREII LYYGLDKECLTWEDISKRI
Sbjct: 406 YIADNRVENNPWHGVDDWALKDEVNKLIIVTLGEREREIIRLYYGLDKECLTWEDISKRI 465
Query: 348 GLSRERVRQVGLVALEKLKHAARKKKMEAMLVKH 247
GLSRERVRQVGLVALEKLKHAARKKKMEAMLVKH
Sbjct: 466 GLSRERVRQVGLVALEKLKHAARKKKMEAMLVKH 499
>XP_007029766.2 PREDICTED: RNA polymerase sigma factor sigA isoform X1 [Theobroma
cacao]
Length = 508
Score = 673 bits (1736), Expect = 0.0
Identities = 337/394 (85%), Positives = 370/394 (93%)
Frame = -2
Query: 1428 QKSMLEKQWNLSFERTVLTDSQSKKTHKKVPVTCSGVSARQRRMNTKKKILSHSKSVMQH 1249
QKSMLEKQW LSFERTV T+S S+K HKK+PVTCSGVSARQRR NTK+KILS +KS++Q
Sbjct: 116 QKSMLEKQWTLSFERTVFTESPSRKIHKKIPVTCSGVSARQRRFNTKRKILSQNKSIIQP 175
Query: 1248 YGSKQLRSMISPELIQNRLKGYVKGVVSDELLTHAEVVRLSKKIKTGLSLDEHKLRLKER 1069
+KQLRS+ISPEL+Q+RLKGYVKGVVS+ELL+HAEVVRLSKKIK GLSL+EH+LRLKER
Sbjct: 176 -NAKQLRSLISPELLQSRLKGYVKGVVSEELLSHAEVVRLSKKIKAGLSLEEHRLRLKER 234
Query: 1068 LGCEPSVEQFAASLRISRPELQSITMECSLAREKLVMSNVRLVMSIAQRYDNMGADMADL 889
LGCEPS EQ A SL+ISR EL+S +ECSLAREKL MSNVRLVMSIAQRYDNMGA+M+DL
Sbjct: 235 LGCEPSDEQLATSLKISRAELRSKLIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMSDL 294
Query: 888 VQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSKALVENSRTVRLPNHLHERLGLIR 709
+QGGLIGLLRGIEKFDSSKG+KISTYVYWWIRQGVS+ALVENSRT+RLP HLHERLGLIR
Sbjct: 295 IQGGLIGLLRGIEKFDSSKGYKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIR 354
Query: 708 NAKIKLEEKGVTPSVDRIAEYLNMTQKKVRNATEAMSKVFSLDREAFPSLNGLPGETHHS 529
NAKI+LEEKG+TP++DRIAE LNM+QKKVRNATEA+SKVFSLDR+AFPSLNGLPGETHHS
Sbjct: 355 NAKIRLEEKGITPTIDRIAESLNMSQKKVRNATEAVSKVFSLDRDAFPSLNGLPGETHHS 414
Query: 528 YIADKRVENNPWHGVDEWALKDEVNKLITVTLGEREREIIHLYYGLDKECLTWEDISKRI 349
YIAD VEN PWHGVDEWALKDEVN+LIT+TLGEREREII LYYGLDKE LTWEDISKRI
Sbjct: 415 YIADNHVENIPWHGVDEWALKDEVNRLITITLGEREREIIRLYYGLDKESLTWEDISKRI 474
Query: 348 GLSRERVRQVGLVALEKLKHAARKKKMEAMLVKH 247
GLSRERVRQVGLVALEKLKHAARKKKMEAMLVKH
Sbjct: 475 GLSRERVRQVGLVALEKLKHAARKKKMEAMLVKH 508
>KDO48031.1 hypothetical protein CISIN_1g010521mg [Citrus sinensis]
Length = 485
Score = 671 bits (1732), Expect = 0.0
Identities = 345/394 (87%), Positives = 361/394 (91%)
Frame = -2
Query: 1428 QKSMLEKQWNLSFERTVLTDSQSKKTHKKVPVTCSGVSARQRRMNTKKKILSHSKSVMQH 1249
QKSMLEKQWNLSFERTVLTDS SKKTHKKVPVTCSGVSARQRR+N+KKKILS +KS++Q
Sbjct: 115 QKSMLEKQWNLSFERTVLTDSPSKKTHKKVPVTCSGVSARQRRLNSKKKILSQNKSILQQ 174
Query: 1248 YGSKQLRSMISPELIQNRLKGYVKGVVSDELLTHAEVVRLSKKIKTGLSLDEHKLRLKER 1069
GSKQLRSMISPELIQNRLKGYVKGVVS+ELLTHAEVVRLSKKIKTGLSLD+HKLRLKER
Sbjct: 175 NGSKQLRSMISPELIQNRLKGYVKGVVSEELLTHAEVVRLSKKIKTGLSLDDHKLRLKER 234
Query: 1068 LGCEPSVEQFAASLRISRPELQSITMECSLAREKLVMSNVRLVMSIAQRYDNMGADMADL 889
LGCEPS+EQ AASLRISRPELQSI MECSLAREKLVMSNVRLVMSIAQRYDNMGADMADL
Sbjct: 235 LGCEPSMEQLAASLRISRPELQSILMECSLAREKLVMSNVRLVMSIAQRYDNMGADMADL 294
Query: 888 VQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSKALVENSRTVRLPNHLHERLGLIR 709
VQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVS+ALVENSRT+RLPNHLHERLGLIR
Sbjct: 295 VQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPNHLHERLGLIR 354
Query: 708 NAKIKLEEKGVTPSVDRIAEYLNMTQKKVRNATEAMSKVFSLDREAFPSLNGLPGETHHS 529
NAK++LEEKGVTPSVDRIAEYLNM+QKKVRNATE + +
Sbjct: 355 NAKLRLEEKGVTPSVDRIAEYLNMSQKKVRNATEVL-----------------------A 391
Query: 528 YIADKRVENNPWHGVDEWALKDEVNKLITVTLGEREREIIHLYYGLDKECLTWEDISKRI 349
YIAD RVENNPWHGVD+WALKDEVNKLI VTLGEREREII LYYGLDKECLTWEDISKRI
Sbjct: 392 YIADNRVENNPWHGVDDWALKDEVNKLIIVTLGEREREIIRLYYGLDKECLTWEDISKRI 451
Query: 348 GLSRERVRQVGLVALEKLKHAARKKKMEAMLVKH 247
GLSRERVRQVGLVALEKLKHAARKKKMEAMLVKH
Sbjct: 452 GLSRERVRQVGLVALEKLKHAARKKKMEAMLVKH 485
>EOY10268.1 Sigma factor A isoform 1 [Theobroma cacao]
Length = 508
Score = 672 bits (1734), Expect = 0.0
Identities = 337/394 (85%), Positives = 369/394 (93%)
Frame = -2
Query: 1428 QKSMLEKQWNLSFERTVLTDSQSKKTHKKVPVTCSGVSARQRRMNTKKKILSHSKSVMQH 1249
QKSMLEKQW LSFERTV T+S S+K HKK+PVTCSGVSARQRR NTK+KIL +KS++Q
Sbjct: 116 QKSMLEKQWTLSFERTVFTESPSRKIHKKIPVTCSGVSARQRRFNTKRKILIQNKSIIQP 175
Query: 1248 YGSKQLRSMISPELIQNRLKGYVKGVVSDELLTHAEVVRLSKKIKTGLSLDEHKLRLKER 1069
+KQLRS+ISPEL+Q+RLKGYVKGVVSDELL+HAEVVRLSKKIK GLSL+EH+LRLKER
Sbjct: 176 -NAKQLRSLISPELLQSRLKGYVKGVVSDELLSHAEVVRLSKKIKAGLSLEEHRLRLKER 234
Query: 1068 LGCEPSVEQFAASLRISRPELQSITMECSLAREKLVMSNVRLVMSIAQRYDNMGADMADL 889
LGCEPS EQ A SL+ISR EL+S +ECSLAREKL MSNVRLVMSIAQRYDNMGA+M+DL
Sbjct: 235 LGCEPSDEQLATSLKISRAELRSKLIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMSDL 294
Query: 888 VQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSKALVENSRTVRLPNHLHERLGLIR 709
+QGGLIGLLRGIEKFDSSKG+KISTYVYWWIRQGVS+ALVENSRT+RLP HLHERLGLIR
Sbjct: 295 IQGGLIGLLRGIEKFDSSKGYKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIR 354
Query: 708 NAKIKLEEKGVTPSVDRIAEYLNMTQKKVRNATEAMSKVFSLDREAFPSLNGLPGETHHS 529
NAKI+LEEKG+TP++DRIAE LNM+QKKVRNATEA+SKVFSLDR+AFPSLNGLPGETHHS
Sbjct: 355 NAKIRLEEKGITPTIDRIAESLNMSQKKVRNATEAVSKVFSLDRDAFPSLNGLPGETHHS 414
Query: 528 YIADKRVENNPWHGVDEWALKDEVNKLITVTLGEREREIIHLYYGLDKECLTWEDISKRI 349
YIAD VEN PWHGVDEWALKDEVN+LIT+TLGEREREII LYYGLDKE LTWEDISKRI
Sbjct: 415 YIADNHVENIPWHGVDEWALKDEVNRLITITLGEREREIIRLYYGLDKESLTWEDISKRI 474
Query: 348 GLSRERVRQVGLVALEKLKHAARKKKMEAMLVKH 247
GLSRERVRQVGLVALEKLKHAARKKKMEAMLVKH
Sbjct: 475 GLSRERVRQVGLVALEKLKHAARKKKMEAMLVKH 508
>XP_012492333.1 PREDICTED: RNA polymerase sigma factor sigA-like isoform X2
[Gossypium raimondii] KJB44350.1 hypothetical protein
B456_007G247500 [Gossypium raimondii]
Length = 508
Score = 664 bits (1712), Expect = 0.0
Identities = 330/394 (83%), Positives = 369/394 (93%)
Frame = -2
Query: 1428 QKSMLEKQWNLSFERTVLTDSQSKKTHKKVPVTCSGVSARQRRMNTKKKILSHSKSVMQH 1249
QKSMLEKQW LSFERT+ T+S S+KTH KVPVTCSGVSARQRR +TK+KILS +KS++Q
Sbjct: 116 QKSMLEKQWTLSFERTMFTESPSRKTHNKVPVTCSGVSARQRRFSTKRKILSQNKSMIQP 175
Query: 1248 YGSKQLRSMISPELIQNRLKGYVKGVVSDELLTHAEVVRLSKKIKTGLSLDEHKLRLKER 1069
+KQLRS+I PEL+QNRLKGYVKGVVS++LL+HAEVVRLS+KIK GLSL+EH+LRLKER
Sbjct: 176 -NAKQLRSLIGPELLQNRLKGYVKGVVSEDLLSHAEVVRLSRKIKAGLSLEEHRLRLKER 234
Query: 1068 LGCEPSVEQFAASLRISRPELQSITMECSLAREKLVMSNVRLVMSIAQRYDNMGADMADL 889
LGCEPS EQ A SL++SR EL+S ++ECSLAREKL MSNVRLVMSIAQRYDNMGA+M+DL
Sbjct: 235 LGCEPSDEQLATSLKVSRAELRSRSIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMSDL 294
Query: 888 VQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSKALVENSRTVRLPNHLHERLGLIR 709
+QGGLIGLLRGIEKFDSSKG+KISTYVYWWIRQGVS+ALVENSRT+RLP +LHERLGLIR
Sbjct: 295 IQGGLIGLLRGIEKFDSSKGYKISTYVYWWIRQGVSRALVENSRTLRLPTYLHERLGLIR 354
Query: 708 NAKIKLEEKGVTPSVDRIAEYLNMTQKKVRNATEAMSKVFSLDREAFPSLNGLPGETHHS 529
NAK +LEEKG+TP++DRIAE LNM+QKKVRNATEA+SKVFSLDR+AFPSLNGLPGETHHS
Sbjct: 355 NAKYRLEEKGITPTIDRIAESLNMSQKKVRNATEAVSKVFSLDRDAFPSLNGLPGETHHS 414
Query: 528 YIADKRVENNPWHGVDEWALKDEVNKLITVTLGEREREIIHLYYGLDKECLTWEDISKRI 349
YIAD VENNPWHGVDEWALKDEVN+LI +TLGEREREII LY+GLDKE LTWEDISKRI
Sbjct: 415 YIADNHVENNPWHGVDEWALKDEVNRLINITLGEREREIIRLYHGLDKESLTWEDISKRI 474
Query: 348 GLSRERVRQVGLVALEKLKHAARKKKMEAMLVKH 247
GLSRERVRQVGLVALEKLKHAARKKKMEAMLVKH
Sbjct: 475 GLSRERVRQVGLVALEKLKHAARKKKMEAMLVKH 508
>XP_016671610.1 PREDICTED: RNA polymerase sigma factor sigA-like [Gossypium hirsutum]
XP_016671617.1 PREDICTED: RNA polymerase sigma factor
sigA-like [Gossypium hirsutum]
Length = 508
Score = 662 bits (1708), Expect = 0.0
Identities = 331/394 (84%), Positives = 367/394 (93%)
Frame = -2
Query: 1428 QKSMLEKQWNLSFERTVLTDSQSKKTHKKVPVTCSGVSARQRRMNTKKKILSHSKSVMQH 1249
QKSMLEKQW LSFERT+ +S S+KTH KVPVTCSGVSARQRR NTK+KILS +KS++Q
Sbjct: 116 QKSMLEKQWTLSFERTMFIESPSRKTHSKVPVTCSGVSARQRRFNTKRKILSQNKSMIQP 175
Query: 1248 YGSKQLRSMISPELIQNRLKGYVKGVVSDELLTHAEVVRLSKKIKTGLSLDEHKLRLKER 1069
+KQLRS+I PEL+QNRLKGYVKGVVS++LL+HAEVVRLSKKIK GLSL+EH LRLKER
Sbjct: 176 -NAKQLRSLIGPELLQNRLKGYVKGVVSEDLLSHAEVVRLSKKIKAGLSLEEHILRLKER 234
Query: 1068 LGCEPSVEQFAASLRISRPELQSITMECSLAREKLVMSNVRLVMSIAQRYDNMGADMADL 889
LGCEPS EQ A SL++SR EL+S ++ECSLAREKL MSNVRLVMSIAQRYDNMGA+M+DL
Sbjct: 235 LGCEPSDEQLATSLKVSRAELRSRSIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMSDL 294
Query: 888 VQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSKALVENSRTVRLPNHLHERLGLIR 709
+QGGLIGLLRGIEKFDSSKG+KISTYVYWWIRQGVS+ALVENSRT+RLP +LHERLGLIR
Sbjct: 295 IQGGLIGLLRGIEKFDSSKGYKISTYVYWWIRQGVSRALVENSRTLRLPTYLHERLGLIR 354
Query: 708 NAKIKLEEKGVTPSVDRIAEYLNMTQKKVRNATEAMSKVFSLDREAFPSLNGLPGETHHS 529
NAK +LEEKG+TP++DRIAE LNM+QKKVRNATEA+SKVFSLDR+AFPSLNGLPGETHHS
Sbjct: 355 NAKYRLEEKGITPTIDRIAESLNMSQKKVRNATEAVSKVFSLDRDAFPSLNGLPGETHHS 414
Query: 528 YIADKRVENNPWHGVDEWALKDEVNKLITVTLGEREREIIHLYYGLDKECLTWEDISKRI 349
YIAD VENNPWHGVDEWALKDEVN+LI +TLGEREREII LY+GLDKE LTWEDISKRI
Sbjct: 415 YIADNHVENNPWHGVDEWALKDEVNRLIDITLGEREREIIRLYHGLDKESLTWEDISKRI 474
Query: 348 GLSRERVRQVGLVALEKLKHAARKKKMEAMLVKH 247
GLSRERVRQVGLVALEKLKHAARKKKMEAMLVKH
Sbjct: 475 GLSRERVRQVGLVALEKLKHAARKKKMEAMLVKH 508
>XP_017630518.1 PREDICTED: RNA polymerase sigma factor sigA-like isoform X1
[Gossypium arboreum] XP_017630519.1 PREDICTED: RNA
polymerase sigma factor sigA-like isoform X1 [Gossypium
arboreum] KHG03684.1 RNA polymerase sigma factor rpoD
[Gossypium arboreum] KHG18047.1 RNA polymerase sigma
factor rpoD [Gossypium arboreum]
Length = 508
Score = 662 bits (1708), Expect = 0.0
Identities = 331/394 (84%), Positives = 367/394 (93%)
Frame = -2
Query: 1428 QKSMLEKQWNLSFERTVLTDSQSKKTHKKVPVTCSGVSARQRRMNTKKKILSHSKSVMQH 1249
QKSMLEKQW LSFERT+ +S S+KTH KVPVTCSGVSARQRR NTK+KILS +KS++Q
Sbjct: 116 QKSMLEKQWTLSFERTMFIESPSRKTHSKVPVTCSGVSARQRRFNTKRKILSQNKSMIQP 175
Query: 1248 YGSKQLRSMISPELIQNRLKGYVKGVVSDELLTHAEVVRLSKKIKTGLSLDEHKLRLKER 1069
+KQLRS+I PEL+QNRLKGYVKGVVS++LL+HAEVVRLSKKIK GLSL+EH LRLKER
Sbjct: 176 -NAKQLRSLIGPELLQNRLKGYVKGVVSEDLLSHAEVVRLSKKIKAGLSLEEHILRLKER 234
Query: 1068 LGCEPSVEQFAASLRISRPELQSITMECSLAREKLVMSNVRLVMSIAQRYDNMGADMADL 889
LGCEPS EQ A SL++SR EL+S ++ECSLAREKL MSNVRLVMSIAQRYDNMGA+M+DL
Sbjct: 235 LGCEPSDEQLATSLKVSRAELRSRSIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMSDL 294
Query: 888 VQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSKALVENSRTVRLPNHLHERLGLIR 709
+QGGLIGLLRGIEKFDSSKG+KISTYVYWWIRQGVS+ALVENSRT+RLP +LHERLGLIR
Sbjct: 295 IQGGLIGLLRGIEKFDSSKGYKISTYVYWWIRQGVSRALVENSRTLRLPTYLHERLGLIR 354
Query: 708 NAKIKLEEKGVTPSVDRIAEYLNMTQKKVRNATEAMSKVFSLDREAFPSLNGLPGETHHS 529
NAK +LEEKG+TP++DRIAE LNM+QKKVRNATEA+SKVFSLDR+AFPSLNGLPGETHHS
Sbjct: 355 NAKYRLEEKGITPTIDRIAESLNMSQKKVRNATEAVSKVFSLDRDAFPSLNGLPGETHHS 414
Query: 528 YIADKRVENNPWHGVDEWALKDEVNKLITVTLGEREREIIHLYYGLDKECLTWEDISKRI 349
YIAD VENNPWHGVDEWALKDEVN+LI +TLGEREREII LY+GLDKE LTWEDISKRI
Sbjct: 415 YIADNHVENNPWHGVDEWALKDEVNRLIDITLGEREREIIRLYHGLDKESLTWEDISKRI 474
Query: 348 GLSRERVRQVGLVALEKLKHAARKKKMEAMLVKH 247
GLSRERVRQVGLVALEKLKHAARKKKMEAMLVKH
Sbjct: 475 GLSRERVRQVGLVALEKLKHAARKKKMEAMLVKH 508
>OMO87271.1 RNA polymerase sigma-70 [Corchorus capsularis]
Length = 508
Score = 658 bits (1697), Expect = 0.0
Identities = 333/420 (79%), Positives = 370/420 (88%)
Frame = -2
Query: 1509 WFETSNDIXXXXXXXXXXXXXXXXXXLQKSMLEKQWNLSFERTVLTDSQSKKTHKKVPVT 1330
WF+ SND+ QKSMLEKQW LSFERTV T+S +KTHKK+PVT
Sbjct: 91 WFQGSNDLDEENYDLDYSVDALLLL--QKSMLEKQWTLSFERTVFTESPGRKTHKKIPVT 148
Query: 1329 CSGVSARQRRMNTKKKILSHSKSVMQHYGSKQLRSMISPELIQNRLKGYVKGVVSDELLT 1150
CSGVSARQRR+NTK+K+L +KSV+Q +KQLRS+ISPEL Q+RL GYVKGVVS+ELL+
Sbjct: 149 CSGVSARQRRLNTKRKLLRQNKSVIQP-SAKQLRSLISPELFQSRLNGYVKGVVSEELLS 207
Query: 1149 HAEVVRLSKKIKTGLSLDEHKLRLKERLGCEPSVEQFAASLRISRPELQSITMECSLARE 970
HAEVVRLSKKIK GLSL++H+ RL ERLGCEPS EQ A SL+I+R EL+S +ECSLARE
Sbjct: 208 HAEVVRLSKKIKVGLSLEDHRSRLTERLGCEPSDEQLATSLKITRAELRSKVIECSLARE 267
Query: 969 KLVMSNVRLVMSIAQRYDNMGADMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQ 790
KL MSNVRLVMSIAQRYDNMGA+M+DL+QGGLIGLLRGIEKFDSSKG+KISTYVYWWIRQ
Sbjct: 268 KLAMSNVRLVMSIAQRYDNMGAEMSDLIQGGLIGLLRGIEKFDSSKGYKISTYVYWWIRQ 327
Query: 789 GVSKALVENSRTVRLPNHLHERLGLIRNAKIKLEEKGVTPSVDRIAEYLNMTQKKVRNAT 610
GVS+ALVENSRT+RLP HLHERLGLIRNAK +LEEKG+TP++DRIAE LNM+QKKVRNAT
Sbjct: 328 GVSRALVENSRTLRLPTHLHERLGLIRNAKNRLEEKGITPTIDRIAESLNMSQKKVRNAT 387
Query: 609 EAMSKVFSLDREAFPSLNGLPGETHHSYIADKRVENNPWHGVDEWALKDEVNKLITVTLG 430
EA+SKVFSLDR+AFPSLNGLPGETHHSYI D VENNPWHGVDEWALKDEVN+LIT+TLG
Sbjct: 388 EAVSKVFSLDRDAFPSLNGLPGETHHSYIPDNHVENNPWHGVDEWALKDEVNRLITITLG 447
Query: 429 EREREIIHLYYGLDKECLTWEDISKRIGLSRERVRQVGLVALEKLKHAARKKKMEAMLVK 250
EREREII LYYGLDK LTWEDISKRIGLSRERVRQVGLVALEKLKHAARKKKMEAMLVK
Sbjct: 448 EREREIIRLYYGLDKGSLTWEDISKRIGLSRERVRQVGLVALEKLKHAARKKKMEAMLVK 507
>OMP05985.1 RNA polymerase sigma-70 [Corchorus olitorius]
Length = 507
Score = 656 bits (1692), Expect = 0.0
Identities = 333/420 (79%), Positives = 371/420 (88%)
Frame = -2
Query: 1509 WFETSNDIXXXXXXXXXXXXXXXXXXLQKSMLEKQWNLSFERTVLTDSQSKKTHKKVPVT 1330
WF+ SND+ QKSMLEKQW LSFERTV T+S S+KT KK+PVT
Sbjct: 90 WFQGSNDLDEESYDLDYSVEALLLL--QKSMLEKQWTLSFERTVFTESPSRKTLKKIPVT 147
Query: 1329 CSGVSARQRRMNTKKKILSHSKSVMQHYGSKQLRSMISPELIQNRLKGYVKGVVSDELLT 1150
CSGVSARQRR+NTK+K+L KSV+Q +KQLRS+ISPEL+Q+RLKGYVKGVVS+ELL+
Sbjct: 148 CSGVSARQRRLNTKRKLLRQKKSVIQP-SAKQLRSLISPELLQSRLKGYVKGVVSEELLS 206
Query: 1149 HAEVVRLSKKIKTGLSLDEHKLRLKERLGCEPSVEQFAASLRISRPELQSITMECSLARE 970
HAEVVRLSKKIK GLSL++H+ RL ERLGCEPS EQ A SL+I+R EL+S +ECSLARE
Sbjct: 207 HAEVVRLSKKIKVGLSLEDHRSRLTERLGCEPSDEQLATSLKITRAELRSKVIECSLARE 266
Query: 969 KLVMSNVRLVMSIAQRYDNMGADMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQ 790
KL MSNVRLVMSIAQRYDNMGA+M+DL+QGGLIGLLRGIEKFDSSKG+KISTYVYWWIRQ
Sbjct: 267 KLAMSNVRLVMSIAQRYDNMGAEMSDLIQGGLIGLLRGIEKFDSSKGYKISTYVYWWIRQ 326
Query: 789 GVSKALVENSRTVRLPNHLHERLGLIRNAKIKLEEKGVTPSVDRIAEYLNMTQKKVRNAT 610
GVS+ALVENSRT+RLP HLHERLGLIRNAK +LEEKG+TP++DRIAE LNM+QKKVRNAT
Sbjct: 327 GVSRALVENSRTLRLPTHLHERLGLIRNAKNRLEEKGITPTIDRIAESLNMSQKKVRNAT 386
Query: 609 EAMSKVFSLDREAFPSLNGLPGETHHSYIADKRVENNPWHGVDEWALKDEVNKLITVTLG 430
EA+SKVFSLDR+AFPSLNGLPGETHHSYI D VENNPWHGVD+WALKDEVN+LIT+TLG
Sbjct: 387 EAVSKVFSLDRDAFPSLNGLPGETHHSYIPDNHVENNPWHGVDDWALKDEVNRLITITLG 446
Query: 429 EREREIIHLYYGLDKECLTWEDISKRIGLSRERVRQVGLVALEKLKHAARKKKMEAMLVK 250
REREII LYYGLDKE LTWEDISKRIGLSRERVRQVGLVALEKLKHAARKKKMEAMLVK
Sbjct: 447 IREREIIRLYYGLDKESLTWEDISKRIGLSRERVRQVGLVALEKLKHAARKKKMEAMLVK 506
>XP_016697692.1 PREDICTED: RNA polymerase sigma factor sigA-like isoform X2
[Gossypium hirsutum]
Length = 508
Score = 655 bits (1689), Expect = 0.0
Identities = 329/394 (83%), Positives = 366/394 (92%)
Frame = -2
Query: 1428 QKSMLEKQWNLSFERTVLTDSQSKKTHKKVPVTCSGVSARQRRMNTKKKILSHSKSVMQH 1249
QKSMLEKQW LSFERT+ T+S S+KTH KVPVTCSGVSARQRR NTK+KILS +KS++Q
Sbjct: 116 QKSMLEKQWTLSFERTMFTESPSRKTHNKVPVTCSGVSARQRRFNTKRKILSQNKSMIQP 175
Query: 1248 YGSKQLRSMISPELIQNRLKGYVKGVVSDELLTHAEVVRLSKKIKTGLSLDEHKLRLKER 1069
+KQLRS+I PEL+QNRLKGYVKGVVS++LL+H EVVRLSKKIK GLSL+EH+LRLKER
Sbjct: 176 -NAKQLRSLIGPELLQNRLKGYVKGVVSEDLLSHGEVVRLSKKIKAGLSLEEHRLRLKER 234
Query: 1068 LGCEPSVEQFAASLRISRPELQSITMECSLAREKLVMSNVRLVMSIAQRYDNMGADMADL 889
LGCEPS EQ A SL++SR EL+S ++ECSLAREKL MSNVRLVMSIAQRYDNMGA+M+DL
Sbjct: 235 LGCEPSDEQLATSLKVSRAELRSRSIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMSDL 294
Query: 888 VQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSKALVENSRTVRLPNHLHERLGLIR 709
+QGGLIGLLRGIEKFDSSKG+KISTYVY IRQGVS+ALVENSRT+RLP +LHERLGLIR
Sbjct: 295 IQGGLIGLLRGIEKFDSSKGYKISTYVYLVIRQGVSRALVENSRTLRLPTYLHERLGLIR 354
Query: 708 NAKIKLEEKGVTPSVDRIAEYLNMTQKKVRNATEAMSKVFSLDREAFPSLNGLPGETHHS 529
NAK +LEEKG+TP++DRIAE LNM+QKKVRNATEA+SKVFSLDR+AFPSLNGLPGETHHS
Sbjct: 355 NAKYRLEEKGITPTIDRIAESLNMSQKKVRNATEAVSKVFSLDRDAFPSLNGLPGETHHS 414
Query: 528 YIADKRVENNPWHGVDEWALKDEVNKLITVTLGEREREIIHLYYGLDKECLTWEDISKRI 349
YIAD VENNPWHGVDEWALKDEVN+LI +TLGEREREII LY+GLDKE LTWEDISKRI
Sbjct: 415 YIADNHVENNPWHGVDEWALKDEVNRLINITLGEREREIIRLYHGLDKESLTWEDISKRI 474
Query: 348 GLSRERVRQVGLVALEKLKHAARKKKMEAMLVKH 247
GLSRERVRQVGLVALEKLKHAARKKKMEAMLVKH
Sbjct: 475 GLSRERVRQVGLVALEKLKHAARKKKMEAMLVKH 508
>EEF38395.1 RNA polymerase sigma factor rpoD, putative [Ricinus communis]
Length = 508
Score = 650 bits (1676), Expect = 0.0
Identities = 328/394 (83%), Positives = 362/394 (91%)
Frame = -2
Query: 1428 QKSMLEKQWNLSFERTVLTDSQSKKTHKKVPVTCSGVSARQRRMNTKKKILSHSKSVMQH 1249
QKSMLEKQWNLSFERT +DS S+K+ KK+PVTCSGVSARQRR+N ++K LS SK +Q
Sbjct: 115 QKSMLEKQWNLSFERTDSSDSPSRKSQKKIPVTCSGVSARQRRINIRRKNLSQSKFTVQA 174
Query: 1248 YGSKQLRSMISPELIQNRLKGYVKGVVSDELLTHAEVVRLSKKIKTGLSLDEHKLRLKER 1069
KQL+S +SPEL+QNRLKGYVKGVVS+ELL+HAEVVRLS+ IK GLSL++HK RLKER
Sbjct: 175 NVFKQLKSAVSPELLQNRLKGYVKGVVSEELLSHAEVVRLSRIIKAGLSLEDHKSRLKER 234
Query: 1068 LGCEPSVEQFAASLRISRPELQSITMECSLAREKLVMSNVRLVMSIAQRYDNMGADMADL 889
LGC+PS EQ A SL+ISR ELQS ++ CSLAREKL MSNVRLVMSIAQRYDNMGA+MADL
Sbjct: 235 LGCDPSDEQVATSLKISRAELQSKSIACSLAREKLAMSNVRLVMSIAQRYDNMGAEMADL 294
Query: 888 VQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSKALVENSRTVRLPNHLHERLGLIR 709
VQGGLIGLLRGIEKFDSSKGF+ISTYVYWWIRQGVS+ALVENSRT+RLPNHLHERLGLIR
Sbjct: 295 VQGGLIGLLRGIEKFDSSKGFRISTYVYWWIRQGVSRALVENSRTLRLPNHLHERLGLIR 354
Query: 708 NAKIKLEEKGVTPSVDRIAEYLNMTQKKVRNATEAMSKVFSLDREAFPSLNGLPGETHHS 529
NAKI+LEEKGVTPS+DRIAE LN++QKKVRNATEA+SKVFSLDREAFPSLNGLPGETHHS
Sbjct: 355 NAKIRLEEKGVTPSIDRIAESLNISQKKVRNATEAVSKVFSLDREAFPSLNGLPGETHHS 414
Query: 528 YIADKRVENNPWHGVDEWALKDEVNKLITVTLGEREREIIHLYYGLDKECLTWEDISKRI 349
YIAD +ENNPWHGVD+WALKDEVNKLI +TL ERE+EII LYYGLD E LTWEDISKRI
Sbjct: 415 YIADNCLENNPWHGVDDWALKDEVNKLINLTLQEREQEIIRLYYGLDNESLTWEDISKRI 474
Query: 348 GLSRERVRQVGLVALEKLKHAARKKKMEAMLVKH 247
GLSRERVRQVGLVALEKLKHAARKKK+EAMLVKH
Sbjct: 475 GLSRERVRQVGLVALEKLKHAARKKKLEAMLVKH 508
>XP_002524027.2 PREDICTED: RNA polymerase sigma factor sigA [Ricinus communis]
Length = 509
Score = 650 bits (1676), Expect = 0.0
Identities = 328/394 (83%), Positives = 362/394 (91%)
Frame = -2
Query: 1428 QKSMLEKQWNLSFERTVLTDSQSKKTHKKVPVTCSGVSARQRRMNTKKKILSHSKSVMQH 1249
QKSMLEKQWNLSFERT +DS S+K+ KK+PVTCSGVSARQRR+N ++K LS SK +Q
Sbjct: 116 QKSMLEKQWNLSFERTDSSDSPSRKSQKKIPVTCSGVSARQRRINIRRKNLSQSKFTVQA 175
Query: 1248 YGSKQLRSMISPELIQNRLKGYVKGVVSDELLTHAEVVRLSKKIKTGLSLDEHKLRLKER 1069
KQL+S +SPEL+QNRLKGYVKGVVS+ELL+HAEVVRLS+ IK GLSL++HK RLKER
Sbjct: 176 NVFKQLKSAVSPELLQNRLKGYVKGVVSEELLSHAEVVRLSRIIKAGLSLEDHKSRLKER 235
Query: 1068 LGCEPSVEQFAASLRISRPELQSITMECSLAREKLVMSNVRLVMSIAQRYDNMGADMADL 889
LGC+PS EQ A SL+ISR ELQS ++ CSLAREKL MSNVRLVMSIAQRYDNMGA+MADL
Sbjct: 236 LGCDPSDEQVATSLKISRAELQSKSIACSLAREKLAMSNVRLVMSIAQRYDNMGAEMADL 295
Query: 888 VQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSKALVENSRTVRLPNHLHERLGLIR 709
VQGGLIGLLRGIEKFDSSKGF+ISTYVYWWIRQGVS+ALVENSRT+RLPNHLHERLGLIR
Sbjct: 296 VQGGLIGLLRGIEKFDSSKGFRISTYVYWWIRQGVSRALVENSRTLRLPNHLHERLGLIR 355
Query: 708 NAKIKLEEKGVTPSVDRIAEYLNMTQKKVRNATEAMSKVFSLDREAFPSLNGLPGETHHS 529
NAKI+LEEKGVTPS+DRIAE LN++QKKVRNATEA+SKVFSLDREAFPSLNGLPGETHHS
Sbjct: 356 NAKIRLEEKGVTPSIDRIAESLNISQKKVRNATEAVSKVFSLDREAFPSLNGLPGETHHS 415
Query: 528 YIADKRVENNPWHGVDEWALKDEVNKLITVTLGEREREIIHLYYGLDKECLTWEDISKRI 349
YIAD +ENNPWHGVD+WALKDEVNKLI +TL ERE+EII LYYGLD E LTWEDISKRI
Sbjct: 416 YIADNCLENNPWHGVDDWALKDEVNKLINLTLQEREQEIIRLYYGLDNESLTWEDISKRI 475
Query: 348 GLSRERVRQVGLVALEKLKHAARKKKMEAMLVKH 247
GLSRERVRQVGLVALEKLKHAARKKK+EAMLVKH
Sbjct: 476 GLSRERVRQVGLVALEKLKHAARKKKLEAMLVKH 509
>XP_012492331.1 PREDICTED: RNA polymerase sigma factor sigA-like isoform X1
[Gossypium raimondii] XP_012492332.1 PREDICTED: RNA
polymerase sigma factor sigA-like isoform X1 [Gossypium
raimondii] KJB44354.1 hypothetical protein
B456_007G247500 [Gossypium raimondii]
Length = 535
Score = 649 bits (1674), Expect = 0.0
Identities = 330/421 (78%), Positives = 369/421 (87%), Gaps = 27/421 (6%)
Frame = -2
Query: 1428 QKSMLEKQWNLSFERTVLTDSQSKKTHKKVPVTCSGVSARQRRMNTKKKILSHSKSVMQH 1249
QKSMLEKQW LSFERT+ T+S S+KTH KVPVTCSGVSARQRR +TK+KILS +KS++Q
Sbjct: 116 QKSMLEKQWTLSFERTMFTESPSRKTHNKVPVTCSGVSARQRRFSTKRKILSQNKSMIQP 175
Query: 1248 YGSKQLRSMISPELIQNRLKGYVKGVVSDELLTHAEVVRLSKKIKTGLSLDEHKLRLKER 1069
+KQLRS+I PEL+QNRLKGYVKGVVS++LL+HAEVVRLS+KIK GLSL+EH+LRLKER
Sbjct: 176 -NAKQLRSLIGPELLQNRLKGYVKGVVSEDLLSHAEVVRLSRKIKAGLSLEEHRLRLKER 234
Query: 1068 LGCEPSVEQFAASLRISRPELQSITMECSLAREKLVMSNVRLVMSIAQRYDNMGADMADL 889
LGCEPS EQ A SL++SR EL+S ++ECSLAREKL MSNVRLVMSIAQRYDNMGA+M+DL
Sbjct: 235 LGCEPSDEQLATSLKVSRAELRSRSIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMSDL 294
Query: 888 VQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSKALVENSRTVRLPNHLHERLGLIR 709
+QGGLIGLLRGIEKFDSSKG+KISTYVYWWIRQGVS+ALVENSRT+RLP +LHERLGLIR
Sbjct: 295 IQGGLIGLLRGIEKFDSSKGYKISTYVYWWIRQGVSRALVENSRTLRLPTYLHERLGLIR 354
Query: 708 NAKIKLEEKGVTPSVD---------------------------RIAEYLNMTQKKVRNAT 610
NAK +LEEKG+TP++D RIAE LNM+QKKVRNAT
Sbjct: 355 NAKYRLEEKGITPTIDSLLYASSQVSYSLNEPSFKYLILLYFQRIAESLNMSQKKVRNAT 414
Query: 609 EAMSKVFSLDREAFPSLNGLPGETHHSYIADKRVENNPWHGVDEWALKDEVNKLITVTLG 430
EA+SKVFSLDR+AFPSLNGLPGETHHSYIAD VENNPWHGVDEWALKDEVN+LI +TLG
Sbjct: 415 EAVSKVFSLDRDAFPSLNGLPGETHHSYIADNHVENNPWHGVDEWALKDEVNRLINITLG 474
Query: 429 EREREIIHLYYGLDKECLTWEDISKRIGLSRERVRQVGLVALEKLKHAARKKKMEAMLVK 250
EREREII LY+GLDKE LTWEDISKRIGLSRERVRQVGLVALEKLKHAARKKKMEAMLVK
Sbjct: 475 EREREIIRLYHGLDKESLTWEDISKRIGLSRERVRQVGLVALEKLKHAARKKKMEAMLVK 534
Query: 249 H 247
H
Sbjct: 535 H 535
>XP_012070278.1 PREDICTED: RNA polymerase sigma factor sigA [Jatropha curcas]
XP_012070279.1 PREDICTED: RNA polymerase sigma factor
sigA [Jatropha curcas] KDP39565.1 hypothetical protein
JCGZ_02585 [Jatropha curcas]
Length = 508
Score = 648 bits (1671), Expect = 0.0
Identities = 326/394 (82%), Positives = 359/394 (91%)
Frame = -2
Query: 1428 QKSMLEKQWNLSFERTVLTDSQSKKTHKKVPVTCSGVSARQRRMNTKKKILSHSKSVMQH 1249
QKSMLEKQWNLSFERT +DS S K+ K++P+TCSG+SARQRR+NT++K L SKS++Q
Sbjct: 115 QKSMLEKQWNLSFERTASSDSPSTKSQKQIPITCSGLSARQRRINTRRKNLIQSKSIVQA 174
Query: 1248 YGSKQLRSMISPELIQNRLKGYVKGVVSDELLTHAEVVRLSKKIKTGLSLDEHKLRLKER 1069
G KQL+S +SPEL+ NRLKGYVKG+VS+ELLTHAEVV LS+ IK GLSL+EHK RLK+R
Sbjct: 175 SGFKQLKSAVSPELLLNRLKGYVKGIVSEELLTHAEVVSLSRIIKAGLSLEEHKSRLKDR 234
Query: 1068 LGCEPSVEQFAASLRISRPELQSITMECSLAREKLVMSNVRLVMSIAQRYDNMGADMADL 889
LGC+PS EQ A SLRIS +L+S + CSLAREKL MSNVRLVMSIAQRYDNMGA+MADL
Sbjct: 235 LGCDPSDEQLATSLRISLADLRSKLIACSLAREKLAMSNVRLVMSIAQRYDNMGAEMADL 294
Query: 888 VQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSKALVENSRTVRLPNHLHERLGLIR 709
VQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVS+ALVENSRT+RLPNHLHERLGLIR
Sbjct: 295 VQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPNHLHERLGLIR 354
Query: 708 NAKIKLEEKGVTPSVDRIAEYLNMTQKKVRNATEAMSKVFSLDREAFPSLNGLPGETHHS 529
NAKI+LEEKGVTPS+DRIAE LNM+QKKVRNATEA+SKVFSLDREAFPSLNGLPGETHHS
Sbjct: 355 NAKIRLEEKGVTPSIDRIAESLNMSQKKVRNATEAISKVFSLDREAFPSLNGLPGETHHS 414
Query: 528 YIADKRVENNPWHGVDEWALKDEVNKLITVTLGEREREIIHLYYGLDKECLTWEDISKRI 349
YIAD ENNPWHGVDEWALKDEVNKLI +TL +REREII LYYGLD E LTWEDISKRI
Sbjct: 415 YIADNCPENNPWHGVDEWALKDEVNKLIDLTLQQREREIIRLYYGLDNETLTWEDISKRI 474
Query: 348 GLSRERVRQVGLVALEKLKHAARKKKMEAMLVKH 247
GLSRERVRQVGLVALEKLKHAARKKK+EAMLVKH
Sbjct: 475 GLSRERVRQVGLVALEKLKHAARKKKLEAMLVKH 508
>XP_017630520.1 PREDICTED: RNA polymerase sigma factor sigA-like isoform X2
[Gossypium arboreum]
Length = 503
Score = 647 bits (1669), Expect = 0.0
Identities = 326/394 (82%), Positives = 362/394 (91%)
Frame = -2
Query: 1428 QKSMLEKQWNLSFERTVLTDSQSKKTHKKVPVTCSGVSARQRRMNTKKKILSHSKSVMQH 1249
QKSMLEKQW LSFERT+ +S S+KTH KVPVTCSGVSARQRR NTK+KILS +KS++Q
Sbjct: 116 QKSMLEKQWTLSFERTMFIESPSRKTHSKVPVTCSGVSARQRRFNTKRKILSQNKSMIQP 175
Query: 1248 YGSKQLRSMISPELIQNRLKGYVKGVVSDELLTHAEVVRLSKKIKTGLSLDEHKLRLKER 1069
+KQLRS+I PEL+QNRLKGYVKGVVS++LL+HAEVVRLSKKIK GLSL+EH LRLKER
Sbjct: 176 -NAKQLRSLIGPELLQNRLKGYVKGVVSEDLLSHAEVVRLSKKIKAGLSLEEHILRLKER 234
Query: 1068 LGCEPSVEQFAASLRISRPELQSITMECSLAREKLVMSNVRLVMSIAQRYDNMGADMADL 889
LGCEPS EQ A SL++SR EL+S ++ECSLAREKL MSNVRLVMSIAQRYDNMGA+M+DL
Sbjct: 235 LGCEPSDEQLATSLKVSRAELRSRSIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMSDL 294
Query: 888 VQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSKALVENSRTVRLPNHLHERLGLIR 709
+QGGLIGLLRGIEKFDSSKG+KISTYVYWWIRQGVS+ALVENSRT+RLP +LHERLGLIR
Sbjct: 295 IQGGLIGLLRGIEKFDSSKGYKISTYVYWWIRQGVSRALVENSRTLRLPTYLHERLGLIR 354
Query: 708 NAKIKLEEKGVTPSVDRIAEYLNMTQKKVRNATEAMSKVFSLDREAFPSLNGLPGETHHS 529
NAK +LEEKG+TP++DRIAE LNM+QKKVRNATEA+SKVFSLDR+AFPSLNGLPGETHHS
Sbjct: 355 NAKYRLEEKGITPTIDRIAESLNMSQKKVRNATEAVSKVFSLDRDAFPSLNGLPGETHHS 414
Query: 528 YIADKRVENNPWHGVDEWALKDEVNKLITVTLGEREREIIHLYYGLDKECLTWEDISKRI 349
YIAD VENNPWHGVDEWALKDEVN+LI +TLGEREREII LY+GLDKE LTWEDISK
Sbjct: 415 YIADNHVENNPWHGVDEWALKDEVNRLIDITLGEREREIIRLYHGLDKESLTWEDISK-- 472
Query: 348 GLSRERVRQVGLVALEKLKHAARKKKMEAMLVKH 247
RERVRQVGLVALEKLKHAARKKKMEAMLVKH
Sbjct: 473 ---RERVRQVGLVALEKLKHAARKKKMEAMLVKH 503
>OAY41811.1 hypothetical protein MANES_09G130800 [Manihot esculenta] OAY41812.1
hypothetical protein MANES_09G130800 [Manihot esculenta]
Length = 509
Score = 647 bits (1668), Expect = 0.0
Identities = 326/394 (82%), Positives = 360/394 (91%)
Frame = -2
Query: 1428 QKSMLEKQWNLSFERTVLTDSQSKKTHKKVPVTCSGVSARQRRMNTKKKILSHSKSVMQH 1249
QKSMLEKQWNLSFERT +DS ++K+ KK+PVTCSG+SARQRR+NT++K L +K+ +Q
Sbjct: 116 QKSMLEKQWNLSFERTASSDSTNRKSEKKIPVTCSGLSARQRRINTRRKNLGQNKATVQA 175
Query: 1248 YGSKQLRSMISPELIQNRLKGYVKGVVSDELLTHAEVVRLSKKIKTGLSLDEHKLRLKER 1069
KQL+S +SPEL+QNRLKGYVKGVVS+ELLTHAEVVRLS+ IK GLSL++HK RLKER
Sbjct: 176 STFKQLQSAVSPELLQNRLKGYVKGVVSEELLTHAEVVRLSRIIKAGLSLEDHKSRLKER 235
Query: 1068 LGCEPSVEQFAASLRISRPELQSITMECSLAREKLVMSNVRLVMSIAQRYDNMGADMADL 889
LGCEPS EQ A SLRISR ELQS + CSLAREKL MSNVRLVMSIAQRYD+MGA+MADL
Sbjct: 236 LGCEPSDEQLATSLRISRAELQSKLIACSLAREKLAMSNVRLVMSIAQRYDHMGAEMADL 295
Query: 888 VQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSKALVENSRTVRLPNHLHERLGLIR 709
VQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVS+ALV+NSRT+RLPNHLHERLGLIR
Sbjct: 296 VQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVDNSRTLRLPNHLHERLGLIR 355
Query: 708 NAKIKLEEKGVTPSVDRIAEYLNMTQKKVRNATEAMSKVFSLDREAFPSLNGLPGETHHS 529
NAKI+LEEKGVTPS+DRIAE L M+QKKVRNATEA+SKVFSLDREAFPSLNGLPGETHHS
Sbjct: 356 NAKIRLEEKGVTPSIDRIAESLKMSQKKVRNATEAISKVFSLDREAFPSLNGLPGETHHS 415
Query: 528 YIADKRVENNPWHGVDEWALKDEVNKLITVTLGEREREIIHLYYGLDKECLTWEDISKRI 349
YIAD ++NNPWH VDEWALKDEVN+LI +TL EREREII LYYGLD E LTWEDISKRI
Sbjct: 416 YIADNCLDNNPWHVVDEWALKDEVNRLIDLTLREREREIIRLYYGLDNESLTWEDISKRI 475
Query: 348 GLSRERVRQVGLVALEKLKHAARKKKMEAMLVKH 247
GLSRERVRQVGLVALEKLKHAARKKK+EAMLVKH
Sbjct: 476 GLSRERVRQVGLVALEKLKHAARKKKLEAMLVKH 509
>AKC88633.1 sigma factor [Melianthus villosus]
Length = 506
Score = 645 bits (1663), Expect = 0.0
Identities = 324/421 (76%), Positives = 367/421 (87%)
Frame = -2
Query: 1509 WFETSNDIXXXXXXXXXXXXXXXXXXLQKSMLEKQWNLSFERTVLTDSQSKKTHKKVPVT 1330
WF+ SND+ QKSMLEKQWNLSF++T+LTD +KT K++PVT
Sbjct: 88 WFQRSNDVDEQNFDIEYSVEALLLL--QKSMLEKQWNLSFDKTMLTDLVKEKTCKRIPVT 145
Query: 1329 CSGVSARQRRMNTKKKILSHSKSVMQHYGSKQLRSMISPELIQNRLKGYVKGVVSDELLT 1150
CSGVSARQRRM+ K+KILS + S+MQ +LR++I PEL+QNR KGYVKGVVS+ELL+
Sbjct: 146 CSGVSARQRRMSNKRKILSENSSMMQTSRCNRLRTIIGPELMQNRFKGYVKGVVSEELLS 205
Query: 1149 HAEVVRLSKKIKTGLSLDEHKLRLKERLGCEPSVEQFAASLRISRPELQSITMECSLARE 970
HAEVV LSKKIK GLSL+EHKLRLK+RLGCEPS EQ A SLRISR EL+S +E LARE
Sbjct: 206 HAEVVHLSKKIKCGLSLEEHKLRLKKRLGCEPSDEQLATSLRISRAELRSKWIESGLARE 265
Query: 969 KLVMSNVRLVMSIAQRYDNMGADMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQ 790
KL MSNVRLVMSIAQRYDNMGA+M+DLVQGGLIGLLRGIEKFDS+KGFKISTYVYWWIRQ
Sbjct: 266 KLAMSNVRLVMSIAQRYDNMGAEMSDLVQGGLIGLLRGIEKFDSAKGFKISTYVYWWIRQ 325
Query: 789 GVSKALVENSRTVRLPNHLHERLGLIRNAKIKLEEKGVTPSVDRIAEYLNMTQKKVRNAT 610
GVS+AL+ENSRT+RLP HLHERLGLIRNAKI+LEEKG+TPS++R+AE LNM++KK+RNAT
Sbjct: 326 GVSRALIENSRTLRLPTHLHERLGLIRNAKIRLEEKGITPSIERLAECLNMSKKKIRNAT 385
Query: 609 EAMSKVFSLDREAFPSLNGLPGETHHSYIADKRVENNPWHGVDEWALKDEVNKLITVTLG 430
EA+SKVFSLDREAFPSLNGLPGETHHSYIAD ++NNPWHGVDEWALKDEV KLI +TLG
Sbjct: 386 EAISKVFSLDREAFPSLNGLPGETHHSYIADNCLDNNPWHGVDEWALKDEVKKLIEMTLG 445
Query: 429 EREREIIHLYYGLDKECLTWEDISKRIGLSRERVRQVGLVALEKLKHAARKKKMEAMLVK 250
EREREII LY+GLD ECLTWEDISKRIGLSRERVRQVGLVA+EKLKHAAR+K MEAMLVK
Sbjct: 446 EREREIIRLYHGLDNECLTWEDISKRIGLSRERVRQVGLVAMEKLKHAARRKHMEAMLVK 505
Query: 249 H 247
H
Sbjct: 506 H 506