BLASTX nr result
ID: Phellodendron21_contig00003724
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Phellodendron21_contig00003724
(7241 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
YP_009269430.1 RpoC2 (chloroplast) [Zanthoxylum schinifolium] AM... 2053 0.0
YP_009307116.1 RpoC2 (chloroplast) [Zanthoxylum bungeanum] AOR53... 2040 0.0
YP_009166116.1 RpoC2 (chloroplast) [Zanthoxylum piperitum] AKZ89... 2034 0.0
YP_009333741.1 RNA polymerase beta'' subunit (chloroplast) [Clau... 1977 0.0
YP_009333997.1 RNA polymerase beta'' subunit (chloroplast) [Merr... 1976 0.0
YP_009059339.1 RNA polymerase beta' subunit (chloroplast) [Citru... 1971 0.0
YP_740465.1 RNA polymerase beta'' subunit (chloroplast) [Citrus ... 1971 0.0
YP_009333656.1 RNA polymerase beta'' subunit (chloroplast) [Murr... 1961 0.0
YP_009333827.1 RNA polymerase beta'' subunit (chloroplast) [Glyc... 1960 0.0
YP_009333912.1 RNA polymerase beta'' subunit (chloroplast) [Glyc... 1955 0.0
YP_009334082.1 RNA polymerase beta'' subunit (chloroplast) [Micr... 1954 0.0
YP_009019878.1 RNA polymerase beta' subunit (chloroplast) [Azadi... 1921 0.0
YP_009259777.1 RNA polymerase beta' subunit (chloroplast) [Leitn... 1851 0.0
YP_009234205.1 RNA polymerase beta' subunit 2 (chloroplast) [Bos... 1849 0.0
YP_009257283.1 DNA-directed RNA polymerase beta'' chain (chlorop... 1837 0.0
YP_009262281.1 RNA polymerase beta'' subunit (chloroplast) [Spon... 1831 0.0
YP_009262195.1 RNA polymerase beta'' subunit (chloroplast) [Spon... 1828 0.0
AHF71465.1 DNA-directed RNA polymerase beta'' chain (chloroplast... 1821 0.0
YP_009231149.1 DNA-directed RNA polymerase beta'' chain (chlorop... 1819 0.0
YP_009320356.1 DNA-directed RNA polymerase beta'' chain (chlorop... 1818 0.0
>YP_009269430.1 RpoC2 (chloroplast) [Zanthoxylum schinifolium] AMR00466.1 RpoC2
(chloroplast) [Zanthoxylum schinifolium]
Length = 1397
Score = 2053 bits (5320), Expect = 0.0
Identities = 1034/1111 (93%), Positives = 1047/1111 (94%)
Frame = +2
Query: 2 PFTCRSTSWICRLCYGRSPTHGDLVELGEAVGIISGQSIGEPGTQLTLRXXXXXXXXXXX 181
PFTCRSTSWICRLCYGRSPTHGDLVELGEAVGIISGQSIGEPGTQLTLR
Sbjct: 290 PFTCRSTSWICRLCYGRSPTHGDLVELGEAVGIISGQSIGEPGTQLTLRTFHTGGVFTGG 349
Query: 182 XAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCSIDLDVIIESEDIMHNVTIPPKSFLL 361
AEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLC IDLD+IIESEDIMHNVTIPPKSFLL
Sbjct: 350 TAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCLIDLDIIIESEDIMHNVTIPPKSFLL 409
Query: 362 VQNDQYVESEQVIAEIQAGAYTLNFKERVRKHIYSDSEGEMHWSTDVYHAPEFTYSNVHL 541
VQNDQYVESEQVIAEIQAGAYTLNFKERVRKHIYSDSEGEMHWSTDVYHAPEFTYSNVHL
Sbjct: 410 VQNDQYVESEQVIAEIQAGAYTLNFKERVRKHIYSDSEGEMHWSTDVYHAPEFTYSNVHL 469
Query: 542 LPKTSHLWILSGGSCRSSVVSFSLYKDQDQMNIHSLSVERREISSLSLSVNNDQARHKLF 721
LPKTSHLWILSGGSCRSSVVSFSLYKDQDQMNIHSLSVERREISSLSLSVNNDQ RHKLF
Sbjct: 470 LPKTSHLWILSGGSCRSSVVSFSLYKDQDQMNIHSLSVERREISSLSLSVNNDQVRHKLF 529
Query: 722 SSAFSAKKEGGILEMSDYSGFNRIIGTGHCNLIHPAILRANSNLLAKRQRNRFLIPFHSI 901
SS FSAKKEGGILE+SDYSGF RIIGTGHCNLIHPAIL ANS+LLAKRQRNRFLIPFHSI
Sbjct: 530 SSDFSAKKEGGILEISDYSGFKRIIGTGHCNLIHPAILHANSDLLAKRQRNRFLIPFHSI 589
Query: 902 QEQEKELMPHXXXXXXXXXXXXFRRNSILAYFDDPRYRRKSSGITKYGTLGAHSIVKKED 1081
QEQEKELMPH FRRNSILAYFDDPRYRRKSSGITKYGTLGAHSIVKKED
Sbjct: 590 QEQEKELMPHSGISIEIPIGGIFRRNSILAYFDDPRYRRKSSGITKYGTLGAHSIVKKED 649
Query: 1082 LIEYRGLKKIKPKYQIKIDRLFFIPEEVHFFPESSYLMVRNNSIIGVDTRITLNIRSRVG 1261
LIEYRGLKKIKPKYQ++IDRLFFIPEEVH FPESSYLMVRNNSIIGVDTRITLNIRSRVG
Sbjct: 650 LIEYRGLKKIKPKYQMQIDRLFFIPEEVHIFPESSYLMVRNNSIIGVDTRITLNIRSRVG 709
Query: 1262 GLVRIERKKGGIELKIFSGDIHFPGEIDKISRHSGILIPPXXXXXXXXXXXXXXXXXXXW 1441
GLVR+ERKKGGIELKIFSGDIHFPGEIDKISRHSGILIPP W
Sbjct: 710 GLVRMERKKGGIELKIFSGDIHFPGEIDKISRHSGILIPPEREKKKLKESTKESKKLRKW 769
Query: 1442 IYVQRITPTKKKYFVLVRPVVTYEIADGINLATLFPQDPLREKDNMQFRVVNYVLYGKGK 1621
IYVQRITP KKKYFVLVRPVVTYEIADGINLATLFPQDPLREKDNM+FRVVNYVLYGKGK
Sbjct: 770 IYVQRITPIKKKYFVLVRPVVTYEIADGINLATLFPQDPLREKDNMKFRVVNYVLYGKGK 829
Query: 1622 AARGIPDTSIQLVRTCLVLNWDQDKKSSSVEEVCASFVEVRTNGLIRDFLRLNLVKSQIS 1801
A RGIPDTSIQLVRTC VLNWDQDKKSSSVEEVCASFVEVRTNGLIRDFLR+NLVKSQIS
Sbjct: 830 ATRGIPDTSIQLVRTCFVLNWDQDKKSSSVEEVCASFVEVRTNGLIRDFLRINLVKSQIS 889
Query: 1802 YIRKRNHPSGSGLISDNGSVRTNSNPFYSVFGKAGVEQSLSQNQGTIRTLLNRNKECQSL 1981
YIRKRNHPSGSGLISDNGSVRTNSNPFYSVFGKAGVE+SLSQNQGTIRTLLNRNKECQSL
Sbjct: 890 YIRKRNHPSGSGLISDNGSVRTNSNPFYSVFGKAGVEKSLSQNQGTIRTLLNRNKECQSL 949
Query: 1982 IILSSSNYFRMGPLTDVKYHNVIKQSIPIQKGSLTPIRNSLGPLGTALQIENFYSFYYLI 2161
ILSSSNYFRMGP+ DVKYHNVIKQSIP QK SLTPIRNSLGPLGT LQI NFYSFYY
Sbjct: 950 RILSSSNYFRMGPVNDVKYHNVIKQSIPTQKDSLTPIRNSLGPLGTVLQIANFYSFYY-- 1007
Query: 2162 TLITHNHLSVTKYLKLDNLKQPCQVLKYYLMDENGEISNPDTDSKIILNPFNLNWYFLHH 2341
LITHNHLSVTKYLKL NLKQPCQ+LKYYLMDENGEISNPDTDSKIILNPFNLNWYFLHH
Sbjct: 1008 -LITHNHLSVTKYLKLYNLKQPCQILKYYLMDENGEISNPDTDSKIILNPFNLNWYFLHH 1066
Query: 2342 NYCEEMSPIISLGQFLCENVCITKNGPHLKSGQVLIVQVNSVVIRSAKPYLATPGATVHG 2521
NYC+EMSP ISLGQFLCENVCITKNGPHLKSGQVLIVQVNSVVIRSAKPYLATPGATVHG
Sbjct: 1067 NYCKEMSPRISLGQFLCENVCITKNGPHLKSGQVLIVQVNSVVIRSAKPYLATPGATVHG 1126
Query: 2522 HYGEILYEGDTLVTFIYEKSRSGDITQGLPKVEQVLEVRSLDSISMNLEKRVEGWNARIT 2701
HYGEILYEGDTLVTFIYEKSRSGDITQGLPKVEQVLEVRSLDSISMNLEKRVEGWNARIT
Sbjct: 1127 HYGEILYEGDTLVTFIYEKSRSGDITQGLPKVEQVLEVRSLDSISMNLEKRVEGWNARIT 1186
Query: 2702 RILGIPWGFLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQITSKVLVSEA 2881
RILGIPWGFLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRH+EIIVRQITSKVLVSE
Sbjct: 1187 RILGIPWGFLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRHLEIIVRQITSKVLVSED 1246
Query: 2882 GMSNIFLPGELIGLLRAERTGRALEEVICYRAILLGITRASLNTQSFISEASFQETTRVL 3061
GMSNIFLPGELIGLLRAERTGRALEEVICYRAILLGITRASLNTQSFISEASFQETTRVL
Sbjct: 1247 GMSNIFLPGELIGLLRAERTGRALEEVICYRAILLGITRASLNTQSFISEASFQETTRVL 1306
Query: 3062 AKAALRGRIDWLKGLKENVVLGGIIPVGTGFKGLVHCSRQHNTILLERQKGNLFGGEMRD 3241
AKAALRGRIDWLKGLKENVVLGGIIPVGTGFKGLVHCSRQHNTILLERQKGNLFGGEMRD
Sbjct: 1307 AKAALRGRIDWLKGLKENVVLGGIIPVGTGFKGLVHCSRQHNTILLERQKGNLFGGEMRD 1366
Query: 3242 IFLHHRELFDSCISTTFHDTSEQLLRGFNES 3334
IFLHHRELFDSCISTTFHDTSEQLLRGFNES
Sbjct: 1367 IFLHHRELFDSCISTTFHDTSEQLLRGFNES 1397
>YP_009307116.1 RpoC2 (chloroplast) [Zanthoxylum bungeanum] AOR53553.1 RpoC2
(chloroplast) [Zanthoxylum bungeanum]
Length = 1399
Score = 2040 bits (5286), Expect = 0.0
Identities = 1029/1111 (92%), Positives = 1042/1111 (93%)
Frame = +2
Query: 2 PFTCRSTSWICRLCYGRSPTHGDLVELGEAVGIISGQSIGEPGTQLTLRXXXXXXXXXXX 181
PFTCRSTSWICRLCYGRSPTHGDLVELGEAVGIISGQSIGEPGTQLTLR
Sbjct: 292 PFTCRSTSWICRLCYGRSPTHGDLVELGEAVGIISGQSIGEPGTQLTLRTFHTGGVFTGG 351
Query: 182 XAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCSIDLDVIIESEDIMHNVTIPPKSFLL 361
AEHVRAPSNGKIKFNEDLV PTRTRHGHPAFLCSIDLD+IIESEDIMHNVTIPPKSFLL
Sbjct: 352 TAEHVRAPSNGKIKFNEDLVQPTRTRHGHPAFLCSIDLDIIIESEDIMHNVTIPPKSFLL 411
Query: 362 VQNDQYVESEQVIAEIQAGAYTLNFKERVRKHIYSDSEGEMHWSTDVYHAPEFTYSNVHL 541
VQNDQYVESEQVIAEIQAGAYTL+FKERVRKHIYSDSEGEMHWSTDVYHAPEFTYSNVHL
Sbjct: 412 VQNDQYVESEQVIAEIQAGAYTLSFKERVRKHIYSDSEGEMHWSTDVYHAPEFTYSNVHL 471
Query: 542 LPKTSHLWILSGGSCRSSVVSFSLYKDQDQMNIHSLSVERREISSLSLSVNNDQARHKLF 721
LPKTS LWILSGGSC SSVVSFSLYKDQDQMNIHSLSVERREISSLSLSVNNDQARHKLF
Sbjct: 472 LPKTSRLWILSGGSCGSSVVSFSLYKDQDQMNIHSLSVERREISSLSLSVNNDQARHKLF 531
Query: 722 SSAFSAKKEGGILEMSDYSGFNRIIGTGHCNLIHPAILRANSNLLAKRQRNRFLIPFHSI 901
SS FSAKKEGGILE+SDYSGF RI+GTGHCNLIHPAIL ANS+LLAKRQRNRFLIPFHSI
Sbjct: 532 SSDFSAKKEGGILEISDYSGFKRIVGTGHCNLIHPAILHANSDLLAKRQRNRFLIPFHSI 591
Query: 902 QEQEKELMPHXXXXXXXXXXXXFRRNSILAYFDDPRYRRKSSGITKYGTLGAHSIVKKED 1081
EQEKELMPH FRRNSILAYFDDPRYRR+SSGITKYGTLG HSIVKKED
Sbjct: 592 HEQEKELMPHSGISIEIPIGGIFRRNSILAYFDDPRYRRRSSGITKYGTLGVHSIVKKED 651
Query: 1082 LIEYRGLKKIKPKYQIKIDRLFFIPEEVHFFPESSYLMVRNNSIIGVDTRITLNIRSRVG 1261
LIEYRGLKKIKPKYQ++IDRLFFIPEEVH FPESSYLMVRNNSIIGVDTRITLNIRSRVG
Sbjct: 652 LIEYRGLKKIKPKYQMQIDRLFFIPEEVHIFPESSYLMVRNNSIIGVDTRITLNIRSRVG 711
Query: 1262 GLVRIERKKGGIELKIFSGDIHFPGEIDKISRHSGILIPPXXXXXXXXXXXXXXXXXXXW 1441
GLVR+ERKKGGIELKIFSGDIHFPGEIDKISRHSGILIPP W
Sbjct: 712 GLVRMERKKGGIELKIFSGDIHFPGEIDKISRHSGILIPPEREKKKLKESTKESKKLKKW 771
Query: 1442 IYVQRITPTKKKYFVLVRPVVTYEIADGINLATLFPQDPLREKDNMQFRVVNYVLYGKGK 1621
IYVQRI PTKKKYFVLVRPVVTYEIADGINLATLFPQDPLREKDNM+FRVVNYVLYGKGK
Sbjct: 772 IYVQRIAPTKKKYFVLVRPVVTYEIADGINLATLFPQDPLREKDNMKFRVVNYVLYGKGK 831
Query: 1622 AARGIPDTSIQLVRTCLVLNWDQDKKSSSVEEVCASFVEVRTNGLIRDFLRLNLVKSQIS 1801
AARGIPDTSIQLVRTC VLNWDQDKKSSSVEEVCASFVEVRTNGLIRDFLR+NLVKSQIS
Sbjct: 832 AARGIPDTSIQLVRTCFVLNWDQDKKSSSVEEVCASFVEVRTNGLIRDFLRINLVKSQIS 891
Query: 1802 YIRKRNHPSGSGLISDNGSVRTNSNPFYSVFGKAGVEQSLSQNQGTIRTLLNRNKECQSL 1981
YIRKRNHPSGSGLISDNGSVRTNSNPFYSVFGKAGVEQSLSQNQGTIRTLLNRNKECQSL
Sbjct: 892 YIRKRNHPSGSGLISDNGSVRTNSNPFYSVFGKAGVEQSLSQNQGTIRTLLNRNKECQSL 951
Query: 1982 IILSSSNYFRMGPLTDVKYHNVIKQSIPIQKGSLTPIRNSLGPLGTALQIENFYSFYYLI 2161
ILSSSNYFRMGPL DVKYHNVIKQSIP QK SLTPIRNSLGPLGT LQI NFYSFYY
Sbjct: 952 RILSSSNYFRMGPLNDVKYHNVIKQSIPTQKDSLTPIRNSLGPLGTVLQIANFYSFYY-- 1009
Query: 2162 TLITHNHLSVTKYLKLDNLKQPCQVLKYYLMDENGEISNPDTDSKIILNPFNLNWYFLHH 2341
LITHNHLSVT YLKLDNLKQPCQ LKYYLMDENGEISNPDTDSKIILNPFNLNWYFLHH
Sbjct: 1010 -LITHNHLSVTNYLKLDNLKQPCQTLKYYLMDENGEISNPDTDSKIILNPFNLNWYFLHH 1068
Query: 2342 NYCEEMSPIISLGQFLCENVCITKNGPHLKSGQVLIVQVNSVVIRSAKPYLATPGATVHG 2521
NYC+EMSP ISLGQFLCENVCITKNGP LKSGQVLIVQVNSVVIRSAKPYLATPGATVHG
Sbjct: 1069 NYCKEMSPRISLGQFLCENVCITKNGPPLKSGQVLIVQVNSVVIRSAKPYLATPGATVHG 1128
Query: 2522 HYGEILYEGDTLVTFIYEKSRSGDITQGLPKVEQVLEVRSLDSISMNLEKRVEGWNARIT 2701
HYGEILYEGDTLVTFIYEKSRSGDITQGLPKVEQVLEVRSLDSISMNLEKRVEGWNARIT
Sbjct: 1129 HYGEILYEGDTLVTFIYEKSRSGDITQGLPKVEQVLEVRSLDSISMNLEKRVEGWNARIT 1188
Query: 2702 RILGIPWGFLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQITSKVLVSEA 2881
RILGIPWGFLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRH+EIIVRQITSKVLVSE
Sbjct: 1189 RILGIPWGFLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRHLEIIVRQITSKVLVSED 1248
Query: 2882 GMSNIFLPGELIGLLRAERTGRALEEVICYRAILLGITRASLNTQSFISEASFQETTRVL 3061
GMSNIFLPGELIGLLRAERTGRALEEVICYRAILLGITRASLNTQSFISEASFQETTRVL
Sbjct: 1249 GMSNIFLPGELIGLLRAERTGRALEEVICYRAILLGITRASLNTQSFISEASFQETTRVL 1308
Query: 3062 AKAALRGRIDWLKGLKENVVLGGIIPVGTGFKGLVHCSRQHNTILLERQKGNLFGGEMRD 3241
AKAALRGRIDWLKGLKENVVLGGIIPVGTGFKGLVHCSRQHN ILLERQKGNLFGGEMRD
Sbjct: 1309 AKAALRGRIDWLKGLKENVVLGGIIPVGTGFKGLVHCSRQHNIILLERQKGNLFGGEMRD 1368
Query: 3242 IFLHHRELFDSCISTTFHDTSEQLLRGFNES 3334
IFLHHRELFDSCISTTFHDTSEQLLRGFNES
Sbjct: 1369 IFLHHRELFDSCISTTFHDTSEQLLRGFNES 1399
>YP_009166116.1 RpoC2 (chloroplast) [Zanthoxylum piperitum] AKZ89313.1 RpoC2
(chloroplast) [Zanthoxylum piperitum]
Length = 1399
Score = 2035 bits (5271), Expect = 0.0
Identities = 1026/1111 (92%), Positives = 1041/1111 (93%)
Frame = +2
Query: 2 PFTCRSTSWICRLCYGRSPTHGDLVELGEAVGIISGQSIGEPGTQLTLRXXXXXXXXXXX 181
PFTCRSTSWICRLCYGRSPTHGDLVELGEAVGIISGQSIGEPGTQLTLR
Sbjct: 292 PFTCRSTSWICRLCYGRSPTHGDLVELGEAVGIISGQSIGEPGTQLTLRTFHTGGVFTGG 351
Query: 182 XAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCSIDLDVIIESEDIMHNVTIPPKSFLL 361
AEHVRAPSNGKIKFNEDLV PTRTRHGHPAFLCSIDLD+IIESEDIMHNVTIPPKSFLL
Sbjct: 352 TAEHVRAPSNGKIKFNEDLVQPTRTRHGHPAFLCSIDLDIIIESEDIMHNVTIPPKSFLL 411
Query: 362 VQNDQYVESEQVIAEIQAGAYTLNFKERVRKHIYSDSEGEMHWSTDVYHAPEFTYSNVHL 541
VQNDQYVESEQVIAEIQAGAYTL+FKERVRKHIYSDSEGEMHWSTDVYHAPEFTYSNVHL
Sbjct: 412 VQNDQYVESEQVIAEIQAGAYTLSFKERVRKHIYSDSEGEMHWSTDVYHAPEFTYSNVHL 471
Query: 542 LPKTSHLWILSGGSCRSSVVSFSLYKDQDQMNIHSLSVERREISSLSLSVNNDQARHKLF 721
LPKTSHLWILSGGSC SSVVSFSLYKDQDQMNIHSLSVERREISSLSLSVNNDQARHKLF
Sbjct: 472 LPKTSHLWILSGGSCGSSVVSFSLYKDQDQMNIHSLSVERREISSLSLSVNNDQARHKLF 531
Query: 722 SSAFSAKKEGGILEMSDYSGFNRIIGTGHCNLIHPAILRANSNLLAKRQRNRFLIPFHSI 901
SS FSAKKEGGILE+SDYSGF RI+GTGHCNLIHPAIL ANS+LLAKRQRNRFLIPFHSI
Sbjct: 532 SSDFSAKKEGGILEISDYSGFKRIVGTGHCNLIHPAILHANSDLLAKRQRNRFLIPFHSI 591
Query: 902 QEQEKELMPHXXXXXXXXXXXXFRRNSILAYFDDPRYRRKSSGITKYGTLGAHSIVKKED 1081
EQEKELMPH FRRNSILAYFDDPRYRR+SSGITKYGTLG HSIVKKED
Sbjct: 592 HEQEKELMPHSGISIEIPIGGIFRRNSILAYFDDPRYRRRSSGITKYGTLGVHSIVKKED 651
Query: 1082 LIEYRGLKKIKPKYQIKIDRLFFIPEEVHFFPESSYLMVRNNSIIGVDTRITLNIRSRVG 1261
LIEYRGLKKIKPKYQ++IDRLFFIPEEVH FPESSYLMVRNNSIIGVDTRITLNIRSRVG
Sbjct: 652 LIEYRGLKKIKPKYQMQIDRLFFIPEEVHIFPESSYLMVRNNSIIGVDTRITLNIRSRVG 711
Query: 1262 GLVRIERKKGGIELKIFSGDIHFPGEIDKISRHSGILIPPXXXXXXXXXXXXXXXXXXXW 1441
GLVR+ERKKGGIELKIFSGDIHFPGEIDKISRHSGILIPP W
Sbjct: 712 GLVRMERKKGGIELKIFSGDIHFPGEIDKISRHSGILIPPEREKKKLKESTKESKKLKKW 771
Query: 1442 IYVQRITPTKKKYFVLVRPVVTYEIADGINLATLFPQDPLREKDNMQFRVVNYVLYGKGK 1621
IYVQRI PTKKKYFVLVRPVVTYEIADGINLATLFPQDPLREKDNM+FRVVNYVLYGKGK
Sbjct: 772 IYVQRIAPTKKKYFVLVRPVVTYEIADGINLATLFPQDPLREKDNMKFRVVNYVLYGKGK 831
Query: 1622 AARGIPDTSIQLVRTCLVLNWDQDKKSSSVEEVCASFVEVRTNGLIRDFLRLNLVKSQIS 1801
AARGIPDTSIQLVRTC VLNWDQDKKSSSVEEVCASFVEVRTNGLIRDFLR+NLVKS IS
Sbjct: 832 AARGIPDTSIQLVRTCFVLNWDQDKKSSSVEEVCASFVEVRTNGLIRDFLRINLVKSPIS 891
Query: 1802 YIRKRNHPSGSGLISDNGSVRTNSNPFYSVFGKAGVEQSLSQNQGTIRTLLNRNKECQSL 1981
IRKRNHPSGSGLISDNGSVRTNSNPFYSVFGKAGVEQSLSQNQGTIRTLLNRNKECQSL
Sbjct: 892 DIRKRNHPSGSGLISDNGSVRTNSNPFYSVFGKAGVEQSLSQNQGTIRTLLNRNKECQSL 951
Query: 1982 IILSSSNYFRMGPLTDVKYHNVIKQSIPIQKGSLTPIRNSLGPLGTALQIENFYSFYYLI 2161
ILSSSNYFRMGPL DVKYHNVIKQSIP QK SLTPIRNSLGPLGT LQI NFYSFYY
Sbjct: 952 RILSSSNYFRMGPLNDVKYHNVIKQSIPTQKDSLTPIRNSLGPLGTVLQIANFYSFYY-- 1009
Query: 2162 TLITHNHLSVTKYLKLDNLKQPCQVLKYYLMDENGEISNPDTDSKIILNPFNLNWYFLHH 2341
LITHNHL+VT YLKLDNLKQPCQ LKYYLMDENGEISNPDTDSKIILNPFNLNWYFLHH
Sbjct: 1010 -LITHNHLAVTNYLKLDNLKQPCQTLKYYLMDENGEISNPDTDSKIILNPFNLNWYFLHH 1068
Query: 2342 NYCEEMSPIISLGQFLCENVCITKNGPHLKSGQVLIVQVNSVVIRSAKPYLATPGATVHG 2521
NYC+EMSP ISLGQFLCENVCITKNGP LKSGQVLIVQVNSVVIRSAKPYLATPGATVHG
Sbjct: 1069 NYCKEMSPRISLGQFLCENVCITKNGPPLKSGQVLIVQVNSVVIRSAKPYLATPGATVHG 1128
Query: 2522 HYGEILYEGDTLVTFIYEKSRSGDITQGLPKVEQVLEVRSLDSISMNLEKRVEGWNARIT 2701
HYGEILYEGDTLVTFIYEKSRSGDITQGLPKVEQVLEVRSLDSISMNLEKRVEGWNARIT
Sbjct: 1129 HYGEILYEGDTLVTFIYEKSRSGDITQGLPKVEQVLEVRSLDSISMNLEKRVEGWNARIT 1188
Query: 2702 RILGIPWGFLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQITSKVLVSEA 2881
RILGIPWGFLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRH+EIIVRQITSKVLVSE
Sbjct: 1189 RILGIPWGFLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRHLEIIVRQITSKVLVSED 1248
Query: 2882 GMSNIFLPGELIGLLRAERTGRALEEVICYRAILLGITRASLNTQSFISEASFQETTRVL 3061
GMSNIFLPGELIGLLRAERTGRALEEVICYRAILLGITRASLNTQSFI+EASFQETTRVL
Sbjct: 1249 GMSNIFLPGELIGLLRAERTGRALEEVICYRAILLGITRASLNTQSFIAEASFQETTRVL 1308
Query: 3062 AKAALRGRIDWLKGLKENVVLGGIIPVGTGFKGLVHCSRQHNTILLERQKGNLFGGEMRD 3241
AKAALRGRIDWLKGLKENVVLGGIIPVGTGFKGLVHCSRQHNTILLERQKGNLFGGEMRD
Sbjct: 1309 AKAALRGRIDWLKGLKENVVLGGIIPVGTGFKGLVHCSRQHNTILLERQKGNLFGGEMRD 1368
Query: 3242 IFLHHRELFDSCISTTFHDTSEQLLRGFNES 3334
IFLHHRELFDSCISTTFHDTSEQLLRG NES
Sbjct: 1369 IFLHHRELFDSCISTTFHDTSEQLLRGVNES 1399
>YP_009333741.1 RNA polymerase beta'' subunit (chloroplast) [Clausena excavata]
AOZ20695.1 RNA polymerase beta'' subunit (chloroplast)
[Clausena excavata]
Length = 1403
Score = 1977 bits (5121), Expect = 0.0
Identities = 1001/1102 (90%), Positives = 1021/1102 (92%)
Frame = +2
Query: 2 PFTCRSTSWICRLCYGRSPTHGDLVELGEAVGIISGQSIGEPGTQLTLRXXXXXXXXXXX 181
PFTCRSTSWICRLCYGRSPTHGDLVELGEAVGIISGQSIGEPGTQLTLR
Sbjct: 290 PFTCRSTSWICRLCYGRSPTHGDLVELGEAVGIISGQSIGEPGTQLTLRTFHTGGVFTGG 349
Query: 182 XAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCSIDLDVIIESEDIMHNVTIPPKSFLL 361
AEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCSIDLDVIIE EDIMHNVTIPPKSFLL
Sbjct: 350 TAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCSIDLDVIIEGEDIMHNVTIPPKSFLL 409
Query: 362 VQNDQYVESEQVIAEIQAGAYTLNFKERVRKHIYSDSEGEMHWSTDVYHAPEFTYSNVHL 541
VQNDQYVESEQVIAEI+AGAYTLNFKERVRKHIYSDSEGEMHWSTDVYHAPEFTYSNVHL
Sbjct: 410 VQNDQYVESEQVIAEIRAGAYTLNFKERVRKHIYSDSEGEMHWSTDVYHAPEFTYSNVHL 469
Query: 542 LPKTSHLWILSGGSCRSSVVSFSLYKDQDQMNIHSLSVERREISSLSLSVNNDQARHKLF 721
LPKTSHLWILSGGS RSSVVSFSL+KDQDQMNIHSLSVERREISSLSLSVNNDQ RHK F
Sbjct: 470 LPKTSHLWILSGGSRRSSVVSFSLHKDQDQMNIHSLSVERREISSLSLSVNNDQVRHKFF 529
Query: 722 SSAFSAKKEGGILEMSDYSGFNRIIGTGHCNLIHPAILRANSNLLAKRQRNRFLIPFHSI 901
SS FSAKK+G ILEMSDYSGFNRIIGTGHCNLIHPAIL ANS+LLAKRQRN FLIPFHSI
Sbjct: 530 SSDFSAKKKGRILEMSDYSGFNRIIGTGHCNLIHPAILYANSDLLAKRQRNGFLIPFHSI 589
Query: 902 QEQEKELMPHXXXXXXXXXXXXFRRNSILAYFDDPRYRRKSSGITKYGTLGAHSIVKKED 1081
QEQEKELMPH FRRNSILAYFDDPRYRRKSSGITK+GTLGAHSIVKKED
Sbjct: 590 QEQEKELMPHSGISIEIPVRGIFRRNSILAYFDDPRYRRKSSGITKWGTLGAHSIVKKED 649
Query: 1082 LIEYRGLKKIKPKYQIKIDRLFFIPEEVHFFPESSYLMVRNNSIIGVDTRITLNIRSRVG 1261
LIEYRGLKK+KPKYQ+KIDRLFFIPEEVH FPESSYLMVRNNSIIGVDT+ITLNIRSR G
Sbjct: 650 LIEYRGLKKMKPKYQMKIDRLFFIPEEVHIFPESSYLMVRNNSIIGVDTQITLNIRSRGG 709
Query: 1262 GLVRIERKKGGIELKIFSGDIHFPGEIDKISRHSGILIPPXXXXXXXXXXXXXXXXXXXW 1441
GLVR+ERKKGG+ELKIFSGDIHFPGEIDKISRHSGILIPP W
Sbjct: 710 GLVRMERKKGGVELKIFSGDIHFPGEIDKISRHSGILIPPESEKKKLKDTTKDSKKLKKW 769
Query: 1442 IYVQRITPTKKKYFVLVRPVVTYEIADGINLATLFPQDPLREKDNMQFRVVNYVLYGKGK 1621
IYVQRITPTKKK FVLVRPVVTYEIADGINLATLFPQDPLREKDNM+FRVVNYVLYGKGK
Sbjct: 770 IYVQRITPTKKKSFVLVRPVVTYEIADGINLATLFPQDPLREKDNMKFRVVNYVLYGKGK 829
Query: 1622 AARGIPDTSIQLVRTCLVLNWDQDKKSSSVEEVCASFVEVRTNGLIRDFLRLNLVKSQIS 1801
AA GI DTSIQLVRTCLVLNWDQD KSSSVEEVCASFVEVRTNGLIRDFLR+NLVKS IS
Sbjct: 830 AAGGISDTSIQLVRTCLVLNWDQDNKSSSVEEVCASFVEVRTNGLIRDFLRINLVKSNIS 889
Query: 1802 YIRKRNHPSGSGLISDNGSVRTNSNPFYSVFGKAGVEQSLSQNQGTIRTLLNRNKECQSL 1981
Y+RKR+HPSGSGLISDNGS RTNSNPFYSVFGKAGVEQSL QNQGTIRTLLN+NKECQSL
Sbjct: 890 YLRKRDHPSGSGLISDNGSARTNSNPFYSVFGKAGVEQSLRQNQGTIRTLLNKNKECQSL 949
Query: 1982 IILSSSNYFRMGPLTDVKYHNVIKQSIPIQKGSLTPIRNSLGPLGTALQIENFYSFYYLI 2161
+ILSSSNYFRMGPL DVKYHNVIKQSIPIQK SLTPI+ SLGPLGT LQI NFYSFYY
Sbjct: 950 LILSSSNYFRMGPLNDVKYHNVIKQSIPIQKDSLTPIKTSLGPLGTFLQIANFYSFYY-- 1007
Query: 2162 TLITHNHLSVTKYLKLDNLKQPCQVLKYYLMDENGEISNPDTDSKIILNPFNLNWYFLHH 2341
LITHN++SVTKYLKLDNLKQP QVLKYYLMDENGEI NPDTDSKI+LNPFNLNWYFL
Sbjct: 1008 -LITHNNISVTKYLKLDNLKQPFQVLKYYLMDENGEIYNPDTDSKILLNPFNLNWYFLQP 1066
Query: 2342 NYCEEMSPIISLGQFLCENVCITKNGPHLKSGQVLIVQVNSVVIRSAKPYLATPGATVHG 2521
NYCEEMSPIISLGQFLCENV ITK GPHLKSGQVLIVQVNSVVIRSAKPYLATPGATVHG
Sbjct: 1067 NYCEEMSPIISLGQFLCENVRITKRGPHLKSGQVLIVQVNSVVIRSAKPYLATPGATVHG 1126
Query: 2522 HYGEILYEGDTLVTFIYEKSRSGDITQGLPKVEQVLEVRSLDSISMNLEKRVEGWNARIT 2701
HYG ILYEGDTLVTFIYEKSRSGDITQGLPKVEQVLEVRSLDSISMNLEKRVEGWNA IT
Sbjct: 1127 HYGAILYEGDTLVTFIYEKSRSGDITQGLPKVEQVLEVRSLDSISMNLEKRVEGWNASIT 1186
Query: 2702 RILGIPWGFLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQITSKVLVSEA 2881
RILGIPWGFLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQITSKV VSE
Sbjct: 1187 RILGIPWGFLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQITSKVFVSED 1246
Query: 2882 GMSNIFLPGELIGLLRAERTGRALEEVICYRAILLGITRASLNTQSFISEASFQETTRVL 3061
GMSNIFLPGELIGLLRAER GRALEEVICYRAILLGITRASLNTQSFISEASFQETTRVL
Sbjct: 1247 GMSNIFLPGELIGLLRAERMGRALEEVICYRAILLGITRASLNTQSFISEASFQETTRVL 1306
Query: 3062 AKAALRGRIDWLKGLKENVVLGGIIPVGTGFKGLVHCSRQHNTILLERQKGNLFGGEMRD 3241
AKAALRGRIDWLKGLKENVVLGGIIPVGTGFKGLVHCSRQHN ILLERQKGN FGGEMRD
Sbjct: 1307 AKAALRGRIDWLKGLKENVVLGGIIPVGTGFKGLVHCSRQHNNILLERQKGNFFGGEMRD 1366
Query: 3242 IFLHHRELFDSCISTTFHDTSE 3307
IFLHHRELFDSCISTTFHDTSE
Sbjct: 1367 IFLHHRELFDSCISTTFHDTSE 1388
>YP_009333997.1 RNA polymerase beta'' subunit (chloroplast) [Merrillia caloxylon]
AOZ20950.1 RNA polymerase beta'' subunit (chloroplast)
[Merrillia caloxylon]
Length = 1403
Score = 1976 bits (5120), Expect = 0.0
Identities = 1000/1102 (90%), Positives = 1021/1102 (92%)
Frame = +2
Query: 2 PFTCRSTSWICRLCYGRSPTHGDLVELGEAVGIISGQSIGEPGTQLTLRXXXXXXXXXXX 181
PFTCRSTSWICRLCYGRSPTHGDLVELGEAVGII+GQSIGEPGTQLTLR
Sbjct: 290 PFTCRSTSWICRLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLTLRTFHTGGVFTGG 349
Query: 182 XAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCSIDLDVIIESEDIMHNVTIPPKSFLL 361
AEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCSIDLDVIIE EDIMHNVTIPPKSFLL
Sbjct: 350 TAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCSIDLDVIIEGEDIMHNVTIPPKSFLL 409
Query: 362 VQNDQYVESEQVIAEIQAGAYTLNFKERVRKHIYSDSEGEMHWSTDVYHAPEFTYSNVHL 541
VQNDQYVESEQVIAEI+AGAYTLNFKERVRKHIYSDSEGEMHWSTDVYHAPEFTYSNVHL
Sbjct: 410 VQNDQYVESEQVIAEIRAGAYTLNFKERVRKHIYSDSEGEMHWSTDVYHAPEFTYSNVHL 469
Query: 542 LPKTSHLWILSGGSCRSSVVSFSLYKDQDQMNIHSLSVERREISSLSLSVNNDQARHKLF 721
LPKTSHLWILSGGS RSSVVSFSL+KDQDQMNIHSLSVERREISSLSLSVNNDQA HK F
Sbjct: 470 LPKTSHLWILSGGSRRSSVVSFSLHKDQDQMNIHSLSVERREISSLSLSVNNDQAGHKFF 529
Query: 722 SSAFSAKKEGGILEMSDYSGFNRIIGTGHCNLIHPAILRANSNLLAKRQRNRFLIPFHSI 901
SS FSAKK+G I EMSDYSGFNRI+ TGHCNLIHPAIL ANS+LLAKRQRN FLIPFHSI
Sbjct: 530 SSDFSAKKKGRIFEMSDYSGFNRILDTGHCNLIHPAILHANSDLLAKRQRNGFLIPFHSI 589
Query: 902 QEQEKELMPHXXXXXXXXXXXXFRRNSILAYFDDPRYRRKSSGITKYGTLGAHSIVKKED 1081
QE+EKELMPH FRRNSILAYFDDPRYRRKSSGITK+GTLGAHSIVKKED
Sbjct: 590 QEKEKELMPHSGISIEIPVRGIFRRNSILAYFDDPRYRRKSSGITKWGTLGAHSIVKKED 649
Query: 1082 LIEYRGLKKIKPKYQIKIDRLFFIPEEVHFFPESSYLMVRNNSIIGVDTRITLNIRSRVG 1261
LIEYRGLKKIKPKYQ+KIDRLFFIPEEVH FPESSYLMVRNNSIIGVDT+ITLNIRSRVG
Sbjct: 650 LIEYRGLKKIKPKYQMKIDRLFFIPEEVHIFPESSYLMVRNNSIIGVDTQITLNIRSRVG 709
Query: 1262 GLVRIERKKGGIELKIFSGDIHFPGEIDKISRHSGILIPPXXXXXXXXXXXXXXXXXXXW 1441
GLVR+ERKKGG+ELKIFSGDIHFPGEIDKISRHSGILIPP W
Sbjct: 710 GLVRMERKKGGVELKIFSGDIHFPGEIDKISRHSGILIPPESEKKKLKEATKESKKLKKW 769
Query: 1442 IYVQRITPTKKKYFVLVRPVVTYEIADGINLATLFPQDPLREKDNMQFRVVNYVLYGKGK 1621
IYVQRITPTKKK FVLVRPVVTYEIADGINLATLFPQDPLREKDNMQFRVVNYVLYGKGK
Sbjct: 770 IYVQRITPTKKKSFVLVRPVVTYEIADGINLATLFPQDPLREKDNMQFRVVNYVLYGKGK 829
Query: 1622 AARGIPDTSIQLVRTCLVLNWDQDKKSSSVEEVCASFVEVRTNGLIRDFLRLNLVKSQIS 1801
AA GI DTS+QLVRTCLVLNWDQD KSSSVEEVCASFVEVRTNGLIRDFLR+NLVKS IS
Sbjct: 830 AAGGISDTSLQLVRTCLVLNWDQDNKSSSVEEVCASFVEVRTNGLIRDFLRINLVKSNIS 889
Query: 1802 YIRKRNHPSGSGLISDNGSVRTNSNPFYSVFGKAGVEQSLSQNQGTIRTLLNRNKECQSL 1981
Y+RKR+HPSGSGLISDNGS RTNSNPFYSVFGKAGVEQSL QNQGTIRTLLN+NKECQSL
Sbjct: 890 YLRKRDHPSGSGLISDNGSARTNSNPFYSVFGKAGVEQSLRQNQGTIRTLLNKNKECQSL 949
Query: 1982 IILSSSNYFRMGPLTDVKYHNVIKQSIPIQKGSLTPIRNSLGPLGTALQIENFYSFYYLI 2161
I+LSSSNYFRMGPL DVKYHNVIKQSIPIQK SLTPI+ SLGPLGT LQI NFYSFYY
Sbjct: 950 IVLSSSNYFRMGPLNDVKYHNVIKQSIPIQKDSLTPIKTSLGPLGTFLQIANFYSFYY-- 1007
Query: 2162 TLITHNHLSVTKYLKLDNLKQPCQVLKYYLMDENGEISNPDTDSKIILNPFNLNWYFLHH 2341
LITHNH+SVTKYLKLDNLKQP QVLKYYLMDENGEI NPDTDSKI+LNPFNLNWYFL
Sbjct: 1008 -LITHNHISVTKYLKLDNLKQPFQVLKYYLMDENGEIYNPDTDSKILLNPFNLNWYFLQP 1066
Query: 2342 NYCEEMSPIISLGQFLCENVCITKNGPHLKSGQVLIVQVNSVVIRSAKPYLATPGATVHG 2521
NYCEEMSPIISLGQFLCENV ITK GPHLKSGQVLIVQVNSVVIRSAKPYLATPGATVHG
Sbjct: 1067 NYCEEMSPIISLGQFLCENVRITKRGPHLKSGQVLIVQVNSVVIRSAKPYLATPGATVHG 1126
Query: 2522 HYGEILYEGDTLVTFIYEKSRSGDITQGLPKVEQVLEVRSLDSISMNLEKRVEGWNARIT 2701
HYG ILYEGDTLVTFIYEKSRSGDITQGLPKVEQVLEVRSLDSISMNLEKRVEGWNA IT
Sbjct: 1127 HYGAILYEGDTLVTFIYEKSRSGDITQGLPKVEQVLEVRSLDSISMNLEKRVEGWNASIT 1186
Query: 2702 RILGIPWGFLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQITSKVLVSEA 2881
RIL IPWGFLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQITSKVLVSE
Sbjct: 1187 RILWIPWGFLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQITSKVLVSED 1246
Query: 2882 GMSNIFLPGELIGLLRAERTGRALEEVICYRAILLGITRASLNTQSFISEASFQETTRVL 3061
GMSNIFLPGELIGLLRAER GRALEEVICYRAILLGITRASLNTQSFISEASFQETTRVL
Sbjct: 1247 GMSNIFLPGELIGLLRAERMGRALEEVICYRAILLGITRASLNTQSFISEASFQETTRVL 1306
Query: 3062 AKAALRGRIDWLKGLKENVVLGGIIPVGTGFKGLVHCSRQHNTILLERQKGNLFGGEMRD 3241
AKAALRGRIDWLKGLKENVVLGGIIPVGTGFKGLVHCSRQHN ILLERQKGNLFGGEMRD
Sbjct: 1307 AKAALRGRIDWLKGLKENVVLGGIIPVGTGFKGLVHCSRQHNNILLERQKGNLFGGEMRD 1366
Query: 3242 IFLHHRELFDSCISTTFHDTSE 3307
IFLHHRELFDSCISTTFHDTSE
Sbjct: 1367 IFLHHRELFDSCISTTFHDTSE 1388
>YP_009059339.1 RNA polymerase beta' subunit (chloroplast) [Citrus aurantiifolia]
AIL50275.1 RNA polymerase beta' subunit (chloroplast)
[Citrus aurantiifolia]
Length = 1403
Score = 1971 bits (5105), Expect = 0.0
Identities = 998/1102 (90%), Positives = 1020/1102 (92%)
Frame = +2
Query: 2 PFTCRSTSWICRLCYGRSPTHGDLVELGEAVGIISGQSIGEPGTQLTLRXXXXXXXXXXX 181
PFTCRSTSWICRLCYGRSPTHGDLVELGEAVGII+GQSIGEPGTQLTLR
Sbjct: 290 PFTCRSTSWICRLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLTLRTFHTGGVFTGG 349
Query: 182 XAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCSIDLDVIIESEDIMHNVTIPPKSFLL 361
AEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCSIDLDVIIE EDIMHNVTIPPKSFLL
Sbjct: 350 TAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCSIDLDVIIEGEDIMHNVTIPPKSFLL 409
Query: 362 VQNDQYVESEQVIAEIQAGAYTLNFKERVRKHIYSDSEGEMHWSTDVYHAPEFTYSNVHL 541
VQNDQYVESEQVIAEI+AGAYTLNFKERVRKHIYSDSEGEMHWSTDVYHAPEFTYSNVHL
Sbjct: 410 VQNDQYVESEQVIAEIRAGAYTLNFKERVRKHIYSDSEGEMHWSTDVYHAPEFTYSNVHL 469
Query: 542 LPKTSHLWILSGGSCRSSVVSFSLYKDQDQMNIHSLSVERREISSLSLSVNNDQARHKLF 721
LPKTSHLWILSGGS RSSVVSFSL+KDQDQMNIHSLSVERREISSLSLSVNNDQ HK F
Sbjct: 470 LPKTSHLWILSGGSRRSSVVSFSLHKDQDQMNIHSLSVERREISSLSLSVNNDQTGHKFF 529
Query: 722 SSAFSAKKEGGILEMSDYSGFNRIIGTGHCNLIHPAILRANSNLLAKRQRNRFLIPFHSI 901
SS FSAKK+ ILEMSDYSGFNRIIGTGHCNLIHPAIL ANS+LLAKRQRN FLIPFHSI
Sbjct: 530 SSDFSAKKKSRILEMSDYSGFNRIIGTGHCNLIHPAILHANSDLLAKRQRNGFLIPFHSI 589
Query: 902 QEQEKELMPHXXXXXXXXXXXXFRRNSILAYFDDPRYRRKSSGITKYGTLGAHSIVKKED 1081
QEQEKELMPH FRRNSILAYFDDPRYRRKSSGITK+GTLGAHSIVKKED
Sbjct: 590 QEQEKELMPHSGISIEIPVRGIFRRNSILAYFDDPRYRRKSSGITKWGTLGAHSIVKKED 649
Query: 1082 LIEYRGLKKIKPKYQIKIDRLFFIPEEVHFFPESSYLMVRNNSIIGVDTRITLNIRSRVG 1261
LIEYRGLKKIKPKYQ+KIDRLFFIPEEVH FPESSYLMVRNNSIIGVDT+ITLNIRSRVG
Sbjct: 650 LIEYRGLKKIKPKYQMKIDRLFFIPEEVHIFPESSYLMVRNNSIIGVDTQITLNIRSRVG 709
Query: 1262 GLVRIERKKGGIELKIFSGDIHFPGEIDKISRHSGILIPPXXXXXXXXXXXXXXXXXXXW 1441
GLVR+ERK+GG+ELKIFSGDIHFPGEIDKISRHSGILIPP W
Sbjct: 710 GLVRMERKRGGVELKIFSGDIHFPGEIDKISRHSGILIPPESEKTKLKEATKESKKLKKW 769
Query: 1442 IYVQRITPTKKKYFVLVRPVVTYEIADGINLATLFPQDPLREKDNMQFRVVNYVLYGKGK 1621
IYVQRITPTKKK FVLVRPVVTYEIA+GINLATLFPQDPLREKDNMQFRVVNYVLYGKGK
Sbjct: 770 IYVQRITPTKKKSFVLVRPVVTYEIANGINLATLFPQDPLREKDNMQFRVVNYVLYGKGK 829
Query: 1622 AARGIPDTSIQLVRTCLVLNWDQDKKSSSVEEVCASFVEVRTNGLIRDFLRLNLVKSQIS 1801
AA GI DTS+QLVRTCLVLNWDQD KSSSVEEVCASFVEVRTNGLIRDFLR++LVKS IS
Sbjct: 830 AAGGISDTSLQLVRTCLVLNWDQDNKSSSVEEVCASFVEVRTNGLIRDFLRIHLVKSNIS 889
Query: 1802 YIRKRNHPSGSGLISDNGSVRTNSNPFYSVFGKAGVEQSLSQNQGTIRTLLNRNKECQSL 1981
Y+RKR+HPSGSGLISDNGS RTNSNPFYSVFGKAGVEQSL QNQGTIRTLLN+NKECQ L
Sbjct: 890 YLRKRDHPSGSGLISDNGSARTNSNPFYSVFGKAGVEQSLRQNQGTIRTLLNKNKECQVL 949
Query: 1982 IILSSSNYFRMGPLTDVKYHNVIKQSIPIQKGSLTPIRNSLGPLGTALQIENFYSFYYLI 2161
IILSSSNYFRMGPL DVKYHNVIKQSIPIQK SLTPI+ SLGPLGT LQI NFYSFYY
Sbjct: 950 IILSSSNYFRMGPLNDVKYHNVIKQSIPIQKDSLTPIKTSLGPLGTFLQIANFYSFYY-- 1007
Query: 2162 TLITHNHLSVTKYLKLDNLKQPCQVLKYYLMDENGEISNPDTDSKIILNPFNLNWYFLHH 2341
LITHNH+SVTKYLKLDNLKQP QVLKYYLMDE GEI NPDTDSKI+LNPFNLNWYFL
Sbjct: 1008 -LITHNHISVTKYLKLDNLKQPFQVLKYYLMDETGEIYNPDTDSKILLNPFNLNWYFLQP 1066
Query: 2342 NYCEEMSPIISLGQFLCENVCITKNGPHLKSGQVLIVQVNSVVIRSAKPYLATPGATVHG 2521
NYCEEMSPIISLGQFLCENV ITK GP+LKSGQVLIVQVNSVVIRSAKPYLATPGATVHG
Sbjct: 1067 NYCEEMSPIISLGQFLCENVRITKRGPYLKSGQVLIVQVNSVVIRSAKPYLATPGATVHG 1126
Query: 2522 HYGEILYEGDTLVTFIYEKSRSGDITQGLPKVEQVLEVRSLDSISMNLEKRVEGWNARIT 2701
HYG ILYEGDTLVTFIYEKSRSGDITQGLPKVEQVLEVRSLDSISMNLEKRVEGWNA IT
Sbjct: 1127 HYGAILYEGDTLVTFIYEKSRSGDITQGLPKVEQVLEVRSLDSISMNLEKRVEGWNASIT 1186
Query: 2702 RILGIPWGFLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQITSKVLVSEA 2881
RILGIPWGFLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQITSKVLVSE
Sbjct: 1187 RILGIPWGFLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQITSKVLVSED 1246
Query: 2882 GMSNIFLPGELIGLLRAERTGRALEEVICYRAILLGITRASLNTQSFISEASFQETTRVL 3061
GMSNIFLPGELIGLLRAER GRALEEVICYRAILLGITRASLNTQSFISEASFQETTRVL
Sbjct: 1247 GMSNIFLPGELIGLLRAERMGRALEEVICYRAILLGITRASLNTQSFISEASFQETTRVL 1306
Query: 3062 AKAALRGRIDWLKGLKENVVLGGIIPVGTGFKGLVHCSRQHNTILLERQKGNLFGGEMRD 3241
AKAALRGRIDWLKGLKENVVLGGIIPVGTGFKGLVHCSRQHN ILLERQKGNLFGGEMRD
Sbjct: 1307 AKAALRGRIDWLKGLKENVVLGGIIPVGTGFKGLVHCSRQHNNILLERQKGNLFGGEMRD 1366
Query: 3242 IFLHHRELFDSCISTTFHDTSE 3307
IFLHHRELFDSCISTTFHDTSE
Sbjct: 1367 IFLHHRELFDSCISTTFHDTSE 1388
>YP_740465.1 RNA polymerase beta'' subunit (chloroplast) [Citrus sinensis]
YP_009253636.1 RNA polymerase beta'' subunit
(chloroplast) [Citrus platymamma] YP_009320087.1 RNA
polymerase beta'' subunit (chloroplast) [Citrus depressa]
Q09MI8.1 RecName: Full=DNA-directed RNA polymerase
subunit beta''; AltName: Full=PEP; AltName:
Full=Plastid-encoded RNA polymerase subunit beta'';
Short=RNA polymerase subunit beta'' ABI49010.1 RNA
polymerase beta'' subunit (chloroplast) [Citrus sinensis]
ALI86651.1 RNA polymerase beta'' subunit (chloroplast)
[Citrus platymamma] BAV89931.1 RNA polymerase beta''
subunit (chloroplast) [Citrus depressa]
Length = 1403
Score = 1971 bits (5105), Expect = 0.0
Identities = 998/1102 (90%), Positives = 1020/1102 (92%)
Frame = +2
Query: 2 PFTCRSTSWICRLCYGRSPTHGDLVELGEAVGIISGQSIGEPGTQLTLRXXXXXXXXXXX 181
PFTCRSTSWICRLCYGRSPTHGDLVELGEAVGII+GQSIGEPGTQLTLR
Sbjct: 290 PFTCRSTSWICRLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLTLRTFHTGGVFTGG 349
Query: 182 XAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCSIDLDVIIESEDIMHNVTIPPKSFLL 361
AEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCSIDLDVIIE EDIMHNVTIPPKSFLL
Sbjct: 350 TAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCSIDLDVIIEGEDIMHNVTIPPKSFLL 409
Query: 362 VQNDQYVESEQVIAEIQAGAYTLNFKERVRKHIYSDSEGEMHWSTDVYHAPEFTYSNVHL 541
VQNDQYVESEQVIAEI+AGAYTLNFKERVRKHIYSDSEGEMHWSTDVYHAPEFTYSNVHL
Sbjct: 410 VQNDQYVESEQVIAEIRAGAYTLNFKERVRKHIYSDSEGEMHWSTDVYHAPEFTYSNVHL 469
Query: 542 LPKTSHLWILSGGSCRSSVVSFSLYKDQDQMNIHSLSVERREISSLSLSVNNDQARHKLF 721
LPKTSHLWILSGGS RSSVVSFSL+KDQDQMNIHSLSVERREISSLSLSVNNDQ HK F
Sbjct: 470 LPKTSHLWILSGGSRRSSVVSFSLHKDQDQMNIHSLSVERREISSLSLSVNNDQTGHKFF 529
Query: 722 SSAFSAKKEGGILEMSDYSGFNRIIGTGHCNLIHPAILRANSNLLAKRQRNRFLIPFHSI 901
SS FSAKK+G ILEMSDYSGFNRII TGHCNLIHPAIL ANS+LLAKRQRN FLIPFHSI
Sbjct: 530 SSDFSAKKKGRILEMSDYSGFNRIISTGHCNLIHPAILHANSDLLAKRQRNGFLIPFHSI 589
Query: 902 QEQEKELMPHXXXXXXXXXXXXFRRNSILAYFDDPRYRRKSSGITKYGTLGAHSIVKKED 1081
QEQEKELMPH FRRNSILAYFDDPRYRRKSSGITK+GTLGAHSIVKKED
Sbjct: 590 QEQEKELMPHSGISIEIPVRGIFRRNSILAYFDDPRYRRKSSGITKWGTLGAHSIVKKED 649
Query: 1082 LIEYRGLKKIKPKYQIKIDRLFFIPEEVHFFPESSYLMVRNNSIIGVDTRITLNIRSRVG 1261
LIEYRGLKKIKPKYQ+KIDRLFFIPEEVH FPESSYLMVRNNSIIGVDT+ITLNIRSRVG
Sbjct: 650 LIEYRGLKKIKPKYQMKIDRLFFIPEEVHIFPESSYLMVRNNSIIGVDTQITLNIRSRVG 709
Query: 1262 GLVRIERKKGGIELKIFSGDIHFPGEIDKISRHSGILIPPXXXXXXXXXXXXXXXXXXXW 1441
GLVR+ERK+GG+ELKIFSGDIHFPGEIDKISRHSGILIPP W
Sbjct: 710 GLVRMERKRGGVELKIFSGDIHFPGEIDKISRHSGILIPPESEKTKLKEATKESKKLKKW 769
Query: 1442 IYVQRITPTKKKYFVLVRPVVTYEIADGINLATLFPQDPLREKDNMQFRVVNYVLYGKGK 1621
IYVQRITPTKKK FVLVRPVVTYEIA+GINLATLFPQDPLREKDNMQFRVVNYVLYGKGK
Sbjct: 770 IYVQRITPTKKKSFVLVRPVVTYEIANGINLATLFPQDPLREKDNMQFRVVNYVLYGKGK 829
Query: 1622 AARGIPDTSIQLVRTCLVLNWDQDKKSSSVEEVCASFVEVRTNGLIRDFLRLNLVKSQIS 1801
AA GI DTS+QLVRTCLVLNWDQD KSSSVEEVCASFVEVRTNGLIR+FLR+NLVKS IS
Sbjct: 830 AAGGISDTSLQLVRTCLVLNWDQDNKSSSVEEVCASFVEVRTNGLIRNFLRINLVKSNIS 889
Query: 1802 YIRKRNHPSGSGLISDNGSVRTNSNPFYSVFGKAGVEQSLSQNQGTIRTLLNRNKECQSL 1981
Y+RKR+HPSGSGLISDNGS RTNSNPFYSVFGKAGVEQSL QNQGTIRTLLN+NKECQ L
Sbjct: 890 YLRKRDHPSGSGLISDNGSARTNSNPFYSVFGKAGVEQSLRQNQGTIRTLLNKNKECQVL 949
Query: 1982 IILSSSNYFRMGPLTDVKYHNVIKQSIPIQKGSLTPIRNSLGPLGTALQIENFYSFYYLI 2161
IILSSSNYFRMGPL DVKYHNVIKQSIPIQK SLTPI+ SLGPLGT LQI NFYSFYY
Sbjct: 950 IILSSSNYFRMGPLNDVKYHNVIKQSIPIQKDSLTPIKTSLGPLGTFLQIANFYSFYY-- 1007
Query: 2162 TLITHNHLSVTKYLKLDNLKQPCQVLKYYLMDENGEISNPDTDSKIILNPFNLNWYFLHH 2341
LITHNH+SVTKYLKLDNLKQP QVLKYYLMDE GEI NPDTDSKI+LNPFNLNWYFL
Sbjct: 1008 -LITHNHISVTKYLKLDNLKQPFQVLKYYLMDETGEIYNPDTDSKILLNPFNLNWYFLQP 1066
Query: 2342 NYCEEMSPIISLGQFLCENVCITKNGPHLKSGQVLIVQVNSVVIRSAKPYLATPGATVHG 2521
NYCEEMSPIISLGQFLCENV ITK GP+LKSGQVLIVQVNSVVIRSAKPYLATPGATVHG
Sbjct: 1067 NYCEEMSPIISLGQFLCENVRITKRGPYLKSGQVLIVQVNSVVIRSAKPYLATPGATVHG 1126
Query: 2522 HYGEILYEGDTLVTFIYEKSRSGDITQGLPKVEQVLEVRSLDSISMNLEKRVEGWNARIT 2701
HYG ILYEGDTLVTFIYEKSRSGDITQGLPKVEQVLEVRSLDSISMNLEKRVEGWNA IT
Sbjct: 1127 HYGAILYEGDTLVTFIYEKSRSGDITQGLPKVEQVLEVRSLDSISMNLEKRVEGWNASIT 1186
Query: 2702 RILGIPWGFLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQITSKVLVSEA 2881
RILGIPWGFLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQITSKVLVSE
Sbjct: 1187 RILGIPWGFLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQITSKVLVSED 1246
Query: 2882 GMSNIFLPGELIGLLRAERTGRALEEVICYRAILLGITRASLNTQSFISEASFQETTRVL 3061
GMSNIFLPGELIGLLRAER GRALEEVICYRAILLGITRASLNTQSFISEASFQETTRVL
Sbjct: 1247 GMSNIFLPGELIGLLRAERMGRALEEVICYRAILLGITRASLNTQSFISEASFQETTRVL 1306
Query: 3062 AKAALRGRIDWLKGLKENVVLGGIIPVGTGFKGLVHCSRQHNTILLERQKGNLFGGEMRD 3241
AKAALRGRIDWLKGLKENVVLGGIIPVGTGFKGLVHCSRQHN ILLERQKGNLFGGEMRD
Sbjct: 1307 AKAALRGRIDWLKGLKENVVLGGIIPVGTGFKGLVHCSRQHNNILLERQKGNLFGGEMRD 1366
Query: 3242 IFLHHRELFDSCISTTFHDTSE 3307
IFLHHRELFDSCISTTFHDTSE
Sbjct: 1367 IFLHHRELFDSCISTTFHDTSE 1388
>YP_009333656.1 RNA polymerase beta'' subunit (chloroplast) [Murraya koenigii]
AOZ20610.1 RNA polymerase beta'' subunit (chloroplast)
[Murraya koenigii]
Length = 1403
Score = 1961 bits (5080), Expect = 0.0
Identities = 990/1102 (89%), Positives = 1015/1102 (92%)
Frame = +2
Query: 2 PFTCRSTSWICRLCYGRSPTHGDLVELGEAVGIISGQSIGEPGTQLTLRXXXXXXXXXXX 181
PFTCRSTSWICRLCYGRSPTHGDLVELGEAVGIISGQSIGEPGTQLTLR
Sbjct: 290 PFTCRSTSWICRLCYGRSPTHGDLVELGEAVGIISGQSIGEPGTQLTLRTFHTGGVFTGG 349
Query: 182 XAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCSIDLDVIIESEDIMHNVTIPPKSFLL 361
AEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCSIDLDVIIE EDIMHNVTIPPKSFLL
Sbjct: 350 TAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCSIDLDVIIEGEDIMHNVTIPPKSFLL 409
Query: 362 VQNDQYVESEQVIAEIQAGAYTLNFKERVRKHIYSDSEGEMHWSTDVYHAPEFTYSNVHL 541
VQNDQYVESEQV+AEI+AGAYT NFKERVRKHIYSDSEGEMHWSTDVYHAPEFTYSNVHL
Sbjct: 410 VQNDQYVESEQVVAEIRAGAYTFNFKERVRKHIYSDSEGEMHWSTDVYHAPEFTYSNVHL 469
Query: 542 LPKTSHLWILSGGSCRSSVVSFSLYKDQDQMNIHSLSVERREISSLSLSVNNDQARHKLF 721
LPKTSHLWILSGGS RSSVVSFSL+KDQDQMNIHSLSVERREISSLSLSVNNDQA HK
Sbjct: 470 LPKTSHLWILSGGSLRSSVVSFSLHKDQDQMNIHSLSVERREISSLSLSVNNDQAGHKFL 529
Query: 722 SSAFSAKKEGGILEMSDYSGFNRIIGTGHCNLIHPAILRANSNLLAKRQRNRFLIPFHSI 901
SS FSAKK+G ILEMSDYSGFNRI+GTGHCNLIHPAIL ANS+LLAKRQRN F+IPFHSI
Sbjct: 530 SSYFSAKKKGRILEMSDYSGFNRIMGTGHCNLIHPAILHANSDLLAKRQRNGFIIPFHSI 589
Query: 902 QEQEKELMPHXXXXXXXXXXXXFRRNSILAYFDDPRYRRKSSGITKYGTLGAHSIVKKED 1081
QEQEKELMPH FRRNSILAYFDDPRY RKSSGITK+GTLGAHS+VKKED
Sbjct: 590 QEQEKELMPHSGISIEIPVRGIFRRNSILAYFDDPRYIRKSSGITKWGTLGAHSVVKKED 649
Query: 1082 LIEYRGLKKIKPKYQIKIDRLFFIPEEVHFFPESSYLMVRNNSIIGVDTRITLNIRSRVG 1261
LIEYRGLKK+KPKYQ+KIDRLFFIPEEVH FPESSYLMVRNNSIIGVDT+I LNIRSR G
Sbjct: 650 LIEYRGLKKMKPKYQMKIDRLFFIPEEVHIFPESSYLMVRNNSIIGVDTQIALNIRSRGG 709
Query: 1262 GLVRIERKKGGIELKIFSGDIHFPGEIDKISRHSGILIPPXXXXXXXXXXXXXXXXXXXW 1441
GLVR+ERK+GG+ELKIFSGDIHFPGEIDKISRHSGILIPP W
Sbjct: 710 GLVRMERKRGGVELKIFSGDIHFPGEIDKISRHSGILIPPESEKKTLKEATKESKKLKKW 769
Query: 1442 IYVQRITPTKKKYFVLVRPVVTYEIADGINLATLFPQDPLREKDNMQFRVVNYVLYGKGK 1621
IYVQRITPTKKK FVLVRPVVTYEIADGINLATLFPQDPLREKDNM+FRVVNYV YGKGK
Sbjct: 770 IYVQRITPTKKKSFVLVRPVVTYEIADGINLATLFPQDPLREKDNMKFRVVNYVFYGKGK 829
Query: 1622 AARGIPDTSIQLVRTCLVLNWDQDKKSSSVEEVCASFVEVRTNGLIRDFLRLNLVKSQIS 1801
AA GI DTSIQLVRTCLVLNWDQD KSSSVEEVCASFVEVRTNGLIRDFLR+NLVKS IS
Sbjct: 830 AAGGISDTSIQLVRTCLVLNWDQDNKSSSVEEVCASFVEVRTNGLIRDFLRINLVKSNIS 889
Query: 1802 YIRKRNHPSGSGLISDNGSVRTNSNPFYSVFGKAGVEQSLSQNQGTIRTLLNRNKECQSL 1981
Y+RKR+HPSGSGLISDNGS RTNSNPFYSVFGKAGVEQSL QNQGTIRTLLN+NKECQSL
Sbjct: 890 YLRKRDHPSGSGLISDNGSARTNSNPFYSVFGKAGVEQSLRQNQGTIRTLLNKNKECQSL 949
Query: 1982 IILSSSNYFRMGPLTDVKYHNVIKQSIPIQKGSLTPIRNSLGPLGTALQIENFYSFYYLI 2161
IILSSSNYFRMGPL DVKYHNVIKQSIPIQK SLTPI+ SLGPLGT LQI NFYSFYY
Sbjct: 950 IILSSSNYFRMGPLNDVKYHNVIKQSIPIQKDSLTPIKTSLGPLGTFLQIANFYSFYY-- 1007
Query: 2162 TLITHNHLSVTKYLKLDNLKQPCQVLKYYLMDENGEISNPDTDSKIILNPFNLNWYFLHH 2341
LITHNH+SVTKYLKLDNLKQP QVLKYYLMDENG+I NPDTDSKI+LNP NLNWYFL
Sbjct: 1008 -LITHNHISVTKYLKLDNLKQPFQVLKYYLMDENGKIYNPDTDSKILLNPLNLNWYFLQP 1066
Query: 2342 NYCEEMSPIISLGQFLCENVCITKNGPHLKSGQVLIVQVNSVVIRSAKPYLATPGATVHG 2521
NYCEEMSPIISLGQFLCEN+ ITK GPHLKSGQVLIVQVNSVVIRSAKPYLATPGATVHG
Sbjct: 1067 NYCEEMSPIISLGQFLCENIRITKRGPHLKSGQVLIVQVNSVVIRSAKPYLATPGATVHG 1126
Query: 2522 HYGEILYEGDTLVTFIYEKSRSGDITQGLPKVEQVLEVRSLDSISMNLEKRVEGWNARIT 2701
HYG ILYEGDTLVTFIYEKSRSGDITQGLPKVEQVLEVRSLDSISMNLEKRVEGWNA IT
Sbjct: 1127 HYGAILYEGDTLVTFIYEKSRSGDITQGLPKVEQVLEVRSLDSISMNLEKRVEGWNASIT 1186
Query: 2702 RILGIPWGFLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQITSKVLVSEA 2881
RILGIPWGFLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQITSKVLVSE
Sbjct: 1187 RILGIPWGFLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQITSKVLVSEE 1246
Query: 2882 GMSNIFLPGELIGLLRAERTGRALEEVICYRAILLGITRASLNTQSFISEASFQETTRVL 3061
GMSNIFLPGELIGLLRAERTGRA EEVICYRAILLGITRASLNTQSFISEASFQETTRVL
Sbjct: 1247 GMSNIFLPGELIGLLRAERTGRAFEEVICYRAILLGITRASLNTQSFISEASFQETTRVL 1306
Query: 3062 AKAALRGRIDWLKGLKENVVLGGIIPVGTGFKGLVHCSRQHNTILLERQKGNLFGGEMRD 3241
AKAALRGRIDWLKGLKENVVLGGIIPVGTGFKGLVHCSRQHN ILLERQK NLFGGEMRD
Sbjct: 1307 AKAALRGRIDWLKGLKENVVLGGIIPVGTGFKGLVHCSRQHNNILLERQKRNLFGGEMRD 1366
Query: 3242 IFLHHRELFDSCISTTFHDTSE 3307
IFLHHRELFDSCISTT HDTSE
Sbjct: 1367 IFLHHRELFDSCISTTLHDTSE 1388
>YP_009333827.1 RNA polymerase beta'' subunit (chloroplast) [Glycosmis mauritiana]
AOZ20780.1 RNA polymerase beta'' subunit (chloroplast)
[Glycosmis mauritiana]
Length = 1405
Score = 1960 bits (5077), Expect = 0.0
Identities = 998/1104 (90%), Positives = 1017/1104 (92%), Gaps = 2/1104 (0%)
Frame = +2
Query: 2 PFTCRSTSWICRLCYGRSPTHGDLVELGEAVGIISGQSIGEPGTQLTLRXXXXXXXXXXX 181
PFTCRSTSWICRLCYGRSPTHGDLVELGEAVGIISGQSIGEPGTQLTLR
Sbjct: 290 PFTCRSTSWICRLCYGRSPTHGDLVELGEAVGIISGQSIGEPGTQLTLRTFHTGGVFTGG 349
Query: 182 XAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCSIDLDVIIESEDIMHNVTIPPKSFLL 361
AEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCSIDLDVIIE EDIMHNVTIPPKSFLL
Sbjct: 350 TAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCSIDLDVIIEGEDIMHNVTIPPKSFLL 409
Query: 362 VQNDQYVESEQVIAEIQAGAYTLNFKERVRKHIYSDSEGEMHWSTDVYHAPEFTYSNVHL 541
VQNDQYVESEQVIAEI+AGAYTLNFKERVRKHIYSDSEGEMHWSTDVYHAPEFTYSNVHL
Sbjct: 410 VQNDQYVESEQVIAEIRAGAYTLNFKERVRKHIYSDSEGEMHWSTDVYHAPEFTYSNVHL 469
Query: 542 LPKTSHLWILSGGSCRSSVVSFSLYKDQDQMNIHSLSVERREISSLSLSVNNDQARHKLF 721
LPKTSHLWILSGGS RSSVVSFSL+KDQDQMNI SLS+ERRE+ S SLSVNNDQA HK F
Sbjct: 470 LPKTSHLWILSGGSRRSSVVSFSLHKDQDQMNIDSLSLERREVFSRSLSVNNDQAGHKFF 529
Query: 722 SSAFSAKKEGGILEMSDYSGFNRIIGTGHCNLIHPAILRANSNLLAKRQRNRFLIPFHSI 901
SS F AKK+G ILEMSDYSGFNRIIGTGHCNLIHPAIL ANS+LLAKRQRN FLIPFHSI
Sbjct: 530 SSDFPAKKKGRILEMSDYSGFNRIIGTGHCNLIHPAILHANSDLLAKRQRNGFLIPFHSI 589
Query: 902 QEQEKELMPHXXXXXXXXXXXXFRRNSILAYFDDPRYRRKSSGITKYGTLGAHSIVKKED 1081
QEQEKELMPH FRRNSILAYFDDPRYRRKSSGITK+GT GAHSIVKKED
Sbjct: 590 QEQEKELMPHSGISIEIPVRGIFRRNSILAYFDDPRYRRKSSGITKWGTPGAHSIVKKED 649
Query: 1082 LIEYRGLKKIKPKYQIKIDRLFFIPEEVHFFPESSYLMVRNNSIIGVDTRITLNIRSRVG 1261
LIEYRGLKKIKPKYQ+KIDRLFFIPEEVH FPESSYLMVRNNSIIGVDT+ITLNIRSR G
Sbjct: 650 LIEYRGLKKIKPKYQMKIDRLFFIPEEVHIFPESSYLMVRNNSIIGVDTQITLNIRSRGG 709
Query: 1262 GLVRIERKKGGIELKIFSGDIHFPGEIDKISRHSGILIPPXXXXXXXXXXXXXXXXXXXW 1441
GLVR+ERKKGG+ELKIFSGDIHFPGEIDKISRHSGILIPP W
Sbjct: 710 GLVRMERKKGGVELKIFSGDIHFPGEIDKISRHSGILIPPESEKKKLKEAAKESKKLKKW 769
Query: 1442 IYVQRITPTKKKYFVLVRPVVTYEIADGINLATLFPQDPLREKDNMQFRVVNYVLYGKGK 1621
IYVQRITPTKKK FVLVRPVVTYEIADGINLATLFPQDPLREKDNMQFRVVNYVLYGKGK
Sbjct: 770 IYVQRITPTKKKSFVLVRPVVTYEIADGINLATLFPQDPLREKDNMQFRVVNYVLYGKGK 829
Query: 1622 AARGIPDTSIQLVRTCLVLNWDQDKKSSSVEEVCASFVEVRTNGLIRDFLRLNLVKS--Q 1795
AA GI DTSIQLVRTCLVLNWDQD KSSSVEEVCASFVEVRTNGLIRDFLR+NLVKS
Sbjct: 830 AAGGISDTSIQLVRTCLVLNWDQDNKSSSVEEVCASFVEVRTNGLIRDFLRINLVKSNIS 889
Query: 1796 ISYIRKRNHPSGSGLISDNGSVRTNSNPFYSVFGKAGVEQSLSQNQGTIRTLLNRNKECQ 1975
ISY+RKR+HPSGSGLISDNGS RTNSNPFYSVFGKAGVEQSL QNQGTIRTLLN+NKECQ
Sbjct: 890 ISYLRKRDHPSGSGLISDNGSARTNSNPFYSVFGKAGVEQSLRQNQGTIRTLLNKNKECQ 949
Query: 1976 SLIILSSSNYFRMGPLTDVKYHNVIKQSIPIQKGSLTPIRNSLGPLGTALQIENFYSFYY 2155
SLIILSSSNYFRMGPL DVKYHNVIKQSIPIQK SLTPI+ SLGPLGT LQIENF SFYY
Sbjct: 950 SLIILSSSNYFRMGPLNDVKYHNVIKQSIPIQKDSLTPIKTSLGPLGTFLQIENFDSFYY 1009
Query: 2156 LITLITHNHLSVTKYLKLDNLKQPCQVLKYYLMDENGEISNPDTDSKIILNPFNLNWYFL 2335
LITHNH+SVTKYLKLDNLKQP QVLKYYLMDENGEI NPDTDSKI+LNPFNLNWYFL
Sbjct: 1010 ---LITHNHISVTKYLKLDNLKQPFQVLKYYLMDENGEIYNPDTDSKILLNPFNLNWYFL 1066
Query: 2336 HHNYCEEMSPIISLGQFLCENVCITKNGPHLKSGQVLIVQVNSVVIRSAKPYLATPGATV 2515
NYCEEMSPIISLGQFLCENV ITK GPHLKSGQVLIVQVNSVVIRSAKPYLATPGATV
Sbjct: 1067 PPNYCEEMSPIISLGQFLCENVRITKRGPHLKSGQVLIVQVNSVVIRSAKPYLATPGATV 1126
Query: 2516 HGHYGEILYEGDTLVTFIYEKSRSGDITQGLPKVEQVLEVRSLDSISMNLEKRVEGWNAR 2695
HGHYG ILYEGDTLVTFIYEKSRSGDITQGLPKVEQVLEVRSLDSISMNLEKRVEGWNA
Sbjct: 1127 HGHYGAILYEGDTLVTFIYEKSRSGDITQGLPKVEQVLEVRSLDSISMNLEKRVEGWNAS 1186
Query: 2696 ITRILGIPWGFLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQITSKVLVS 2875
ITRILGIPWGFLIGAELTIVQSRISLVNKIQKVYRSQGVQIH+RHIEIIVRQITSKVLVS
Sbjct: 1187 ITRILGIPWGFLIGAELTIVQSRISLVNKIQKVYRSQGVQIHDRHIEIIVRQITSKVLVS 1246
Query: 2876 EAGMSNIFLPGELIGLLRAERTGRALEEVICYRAILLGITRASLNTQSFISEASFQETTR 3055
E GMSNIFLPGELIGLLRAER GRALEEVICYRAILLGITRASLNTQSFISEASFQETTR
Sbjct: 1247 EDGMSNIFLPGELIGLLRAERMGRALEEVICYRAILLGITRASLNTQSFISEASFQETTR 1306
Query: 3056 VLAKAALRGRIDWLKGLKENVVLGGIIPVGTGFKGLVHCSRQHNTILLERQKGNLFGGEM 3235
VLAKAALRGRIDWLKGLKENVVLGGIIPVGTGFKGLVHCSRQHN ILLERQKGNLFGGEM
Sbjct: 1307 VLAKAALRGRIDWLKGLKENVVLGGIIPVGTGFKGLVHCSRQHNNILLERQKGNLFGGEM 1366
Query: 3236 RDIFLHHRELFDSCISTTFHDTSE 3307
RDIFLHHRELFDSCISTTFHD SE
Sbjct: 1367 RDIFLHHRELFDSCISTTFHDISE 1390
>YP_009333912.1 RNA polymerase beta'' subunit (chloroplast) [Glycosmis pentaphylla]
AOZ20865.1 RNA polymerase beta'' subunit (chloroplast)
[Glycosmis pentaphylla]
Length = 1405
Score = 1955 bits (5064), Expect = 0.0
Identities = 995/1104 (90%), Positives = 1015/1104 (91%), Gaps = 2/1104 (0%)
Frame = +2
Query: 2 PFTCRSTSWICRLCYGRSPTHGDLVELGEAVGIISGQSIGEPGTQLTLRXXXXXXXXXXX 181
PFTCRSTSWICRLCYGRSPTHGDLVELGEAVGIISGQSIGEPGTQLTLR
Sbjct: 290 PFTCRSTSWICRLCYGRSPTHGDLVELGEAVGIISGQSIGEPGTQLTLRTFHTGGVFTGG 349
Query: 182 XAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCSIDLDVIIESEDIMHNVTIPPKSFLL 361
AEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCSIDLD+IIE EDIMHNVTIPPKSFLL
Sbjct: 350 TAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCSIDLDIIIEGEDIMHNVTIPPKSFLL 409
Query: 362 VQNDQYVESEQVIAEIQAGAYTLNFKERVRKHIYSDSEGEMHWSTDVYHAPEFTYSNVHL 541
VQNDQYVESEQVIAEI+AGAYTLNFKERVRKHIYSDSEGEMHWSTDVYHAPEFTYSNVHL
Sbjct: 410 VQNDQYVESEQVIAEIRAGAYTLNFKERVRKHIYSDSEGEMHWSTDVYHAPEFTYSNVHL 469
Query: 542 LPKTSHLWILSGGSCRSSVVSFSLYKDQDQMNIHSLSVERREISSLSLSVNNDQARHKLF 721
LPKTSHLWILSGGS RSSVVSFSL+KDQDQMNI SLS+ERRE+ S SLSVNNDQA HK F
Sbjct: 470 LPKTSHLWILSGGSRRSSVVSFSLHKDQDQMNIDSLSLERREVFSRSLSVNNDQAGHKFF 529
Query: 722 SSAFSAKKEGGILEMSDYSGFNRIIGTGHCNLIHPAILRANSNLLAKRQRNRFLIPFHSI 901
SS F AKK+G ILEMSDYSGFNRIIGTGHCNLIHPAIL NS+LLAKRQRN FLIPFHSI
Sbjct: 530 SSDFPAKKKGRILEMSDYSGFNRIIGTGHCNLIHPAILHVNSDLLAKRQRNVFLIPFHSI 589
Query: 902 QEQEKELMPHXXXXXXXXXXXXFRRNSILAYFDDPRYRRKSSGITKYGTLGAHSIVKKED 1081
QEQEKELMPH FRRNSILAYFDDPRYRRKSSGITK+GT GAHSIVKKED
Sbjct: 590 QEQEKELMPHSGISIEIPARGIFRRNSILAYFDDPRYRRKSSGITKWGTPGAHSIVKKED 649
Query: 1082 LIEYRGLKKIKPKYQIKIDRLFFIPEEVHFFPESSYLMVRNNSIIGVDTRITLNIRSRVG 1261
LIEYRGLKKIKPKYQ+KIDRLFFIPEEVH FPESSYLMVRNNSIIGVDT+ITLNIRSR G
Sbjct: 650 LIEYRGLKKIKPKYQMKIDRLFFIPEEVHIFPESSYLMVRNNSIIGVDTQITLNIRSRGG 709
Query: 1262 GLVRIERKKGGIELKIFSGDIHFPGEIDKISRHSGILIPPXXXXXXXXXXXXXXXXXXXW 1441
GLVR+ERKKGG+ELKIFSGDIHFPGEIDKISRHSGILIPP W
Sbjct: 710 GLVRMERKKGGVELKIFSGDIHFPGEIDKISRHSGILIPPESEKKKLKEATKESKKLKKW 769
Query: 1442 IYVQRITPTKKKYFVLVRPVVTYEIADGINLATLFPQDPLREKDNMQFRVVNYVLYGKGK 1621
IYVQRITPTKKK FVLVRPVVTYEIADGINLATLFPQDPLREKDNMQFRVVNYVLYGKGK
Sbjct: 770 IYVQRITPTKKKSFVLVRPVVTYEIADGINLATLFPQDPLREKDNMQFRVVNYVLYGKGK 829
Query: 1622 AARGIPDTSIQLVRTCLVLNWDQDKKSSSVEEVCASFVEVRTNGLIRDFLRLNLVKS--Q 1795
AA GI DTSIQLVRTCLVLNWDQD KSSSVEEVCASFVEVRTNGLIRDFLR+NLVKS
Sbjct: 830 AAGGISDTSIQLVRTCLVLNWDQDNKSSSVEEVCASFVEVRTNGLIRDFLRINLVKSNIS 889
Query: 1796 ISYIRKRNHPSGSGLISDNGSVRTNSNPFYSVFGKAGVEQSLSQNQGTIRTLLNRNKECQ 1975
ISY+RKR+HP GSGLISDNGS RTNSNPFYSVFGKAGVEQSL QNQGTIRTLLN+NKECQ
Sbjct: 890 ISYLRKRDHPLGSGLISDNGSARTNSNPFYSVFGKAGVEQSLRQNQGTIRTLLNKNKECQ 949
Query: 1976 SLIILSSSNYFRMGPLTDVKYHNVIKQSIPIQKGSLTPIRNSLGPLGTALQIENFYSFYY 2155
SLIILSSSNYFRMGPL DVKYHNVIKQSIPIQK SLTPI+ SLGPLGT LQI NF SFYY
Sbjct: 950 SLIILSSSNYFRMGPLNDVKYHNVIKQSIPIQKDSLTPIKTSLGPLGTFLQIANFDSFYY 1009
Query: 2156 LITLITHNHLSVTKYLKLDNLKQPCQVLKYYLMDENGEISNPDTDSKIILNPFNLNWYFL 2335
LITHNH+SVTKYLKLDNLKQP QVLKYYLMDENGEISNPDTDSKI+LNPFNLNWYFL
Sbjct: 1010 ---LITHNHISVTKYLKLDNLKQPFQVLKYYLMDENGEISNPDTDSKILLNPFNLNWYFL 1066
Query: 2336 HHNYCEEMSPIISLGQFLCENVCITKNGPHLKSGQVLIVQVNSVVIRSAKPYLATPGATV 2515
NYCEEMSPIISLGQFLCENV ITK GPHLKSGQVLIVQVNSVVIRSAKPYLATPGATV
Sbjct: 1067 PPNYCEEMSPIISLGQFLCENVRITKRGPHLKSGQVLIVQVNSVVIRSAKPYLATPGATV 1126
Query: 2516 HGHYGEILYEGDTLVTFIYEKSRSGDITQGLPKVEQVLEVRSLDSISMNLEKRVEGWNAR 2695
HGHYG ILYEGDTLVTFIYEKSRSGDITQGLPKVEQVLEVRSLDSISMNLEKRVEGWNA
Sbjct: 1127 HGHYGVILYEGDTLVTFIYEKSRSGDITQGLPKVEQVLEVRSLDSISMNLEKRVEGWNAS 1186
Query: 2696 ITRILGIPWGFLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQITSKVLVS 2875
ITRILGIPWGFLIGAELTIVQSRISLVNKIQKVYRSQGVQIH+RHIEIIVRQITSKVLVS
Sbjct: 1187 ITRILGIPWGFLIGAELTIVQSRISLVNKIQKVYRSQGVQIHDRHIEIIVRQITSKVLVS 1246
Query: 2876 EAGMSNIFLPGELIGLLRAERTGRALEEVICYRAILLGITRASLNTQSFISEASFQETTR 3055
E GMSNIFLPGELIGLLRAER GRALEEVICYRAILLGITRASLNTQSFISEASFQETTR
Sbjct: 1247 EDGMSNIFLPGELIGLLRAERMGRALEEVICYRAILLGITRASLNTQSFISEASFQETTR 1306
Query: 3056 VLAKAALRGRIDWLKGLKENVVLGGIIPVGTGFKGLVHCSRQHNTILLERQKGNLFGGEM 3235
VLAKAALRGRIDWLKGLKENVVLGGIIPVGTGFKGLVHCSRQHN ILLERQKGNLFGGEM
Sbjct: 1307 VLAKAALRGRIDWLKGLKENVVLGGIIPVGTGFKGLVHCSRQHNNILLERQKGNLFGGEM 1366
Query: 3236 RDIFLHHRELFDSCISTTFHDTSE 3307
RDIFLHHRELFDSCISTTFHD SE
Sbjct: 1367 RDIFLHHRELFDSCISTTFHDISE 1390
>YP_009334082.1 RNA polymerase beta'' subunit (chloroplast) [Micromelum minutum]
AOZ21035.1 RNA polymerase beta'' subunit (chloroplast)
[Micromelum minutum]
Length = 1406
Score = 1954 bits (5061), Expect = 0.0
Identities = 994/1104 (90%), Positives = 1013/1104 (91%), Gaps = 2/1104 (0%)
Frame = +2
Query: 2 PFTCRSTSWICRLCYGRSPTHGDLVELGEAVGIISGQSIGEPGTQLTLRXXXXXXXXXXX 181
PFTCRSTSWICRLCYGRSPTHGDLVELGEAVGIISGQSIGEPGTQLTLR
Sbjct: 291 PFTCRSTSWICRLCYGRSPTHGDLVELGEAVGIISGQSIGEPGTQLTLRTFHTGGVFTGG 350
Query: 182 XAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCSIDLDVIIESEDIMHNVTIPPKSFLL 361
AEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCSIDLDVIIE EDIMHNVTIPPKSFLL
Sbjct: 351 TAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCSIDLDVIIEGEDIMHNVTIPPKSFLL 410
Query: 362 VQNDQYVESEQVIAEIQAGAYTLNFKERVRKHIYSDSEGEMHWSTDVYHAPEFTYSNVHL 541
VQNDQYVESEQVIAEI+AGAYTLNFKERVRKHIYSDSEGEMHWSTDVYHAPEFTYSNVHL
Sbjct: 411 VQNDQYVESEQVIAEIRAGAYTLNFKERVRKHIYSDSEGEMHWSTDVYHAPEFTYSNVHL 470
Query: 542 LPKTSHLWILSGGSCRSSVVSFSLYKDQDQMNIHSLSVERREISSLSLSVNNDQARHKLF 721
LPKTSHLWILSGGS RSSVVSFSL+KDQDQMNI SLSVERREISSLSLSVNNDQA HK F
Sbjct: 471 LPKTSHLWILSGGSRRSSVVSFSLHKDQDQMNIDSLSVERREISSLSLSVNNDQAGHKFF 530
Query: 722 SSAFSAKKEGGILEMSDYSGFNRIIGTGHCNLIHPAILRANSNLLAKRQRNRFLIPFHSI 901
SS FSAKK+G IL+MS YSGFNRIIGTGHCNL HPAIL ANS+LLAKRQRN FLIPFHSI
Sbjct: 531 SSDFSAKKKGRILDMSYYSGFNRIIGTGHCNLSHPAILHANSDLLAKRQRNGFLIPFHSI 590
Query: 902 QEQEKELMPHXXXXXXXXXXXXFRRNSILAYFDDPRYRRKSSGITKYGTLGAHSIVKKED 1081
QEQEKELMPH FRRNSILAYFDDPRYRRKSSGITK+GTLGAHSIVKKED
Sbjct: 591 QEQEKELMPHSAISIEIPVRGIFRRNSILAYFDDPRYRRKSSGITKWGTLGAHSIVKKED 650
Query: 1082 LIEYRGLKKIKPKYQIKIDRLFFIPEEVHFFPESSYLMVRNNSIIGVDTRITLNIRSRVG 1261
LIEYRGLKKIKPKYQ+KIDRLFFIPEEVH FPESSYLMVRNNSIIGVDT+ITLNIRSR G
Sbjct: 651 LIEYRGLKKIKPKYQMKIDRLFFIPEEVHIFPESSYLMVRNNSIIGVDTQITLNIRSRGG 710
Query: 1262 GLVRIERKKGGIELKIFSGDIHFPGEIDKISRHSGILIPPXXXXXXXXXXXXXXXXXXXW 1441
GLVRIERK+GG+ELKIFSGDIHFPGEIDKISRHSGILIPP W
Sbjct: 711 GLVRIERKRGGVELKIFSGDIHFPGEIDKISRHSGILIPPESEKKKLKEVTKESKKLKKW 770
Query: 1442 IYVQRITPTKKKYFVLVRPVVTYEIADGINLATLFPQDPLREKDNMQFRVVNYVLYGKGK 1621
IYVQRITPTKKK FVLVRPVVTYEIADGINLATLFPQDPLREKDNMQFRVVNYVLYGKGK
Sbjct: 771 IYVQRITPTKKKSFVLVRPVVTYEIADGINLATLFPQDPLREKDNMQFRVVNYVLYGKGK 830
Query: 1622 AARGIPDTSIQLVRTCLVLNWDQDKKSSSVEEVCASFVEVRTNGLIRDFLRLNLVKSQIS 1801
AA GI DTSIQLVRTCLVLNWDQD KSSSVEE+CASFVEVRTNGL RDFLR+NLVKS IS
Sbjct: 831 AAGGISDTSIQLVRTCLVLNWDQDNKSSSVEEICASFVEVRTNGLSRDFLRINLVKSNIS 890
Query: 1802 YIRKRNHPSGSGLISDNGSVRTNSNPFYSVFGKAGVEQSLSQNQGTIRTLLNRNKECQSL 1981
Y+RKR+HPSGSGLI DNGS RTNSNPFYSVFGKAGVEQSL QNQGTIRTLLN+N+ECQSL
Sbjct: 891 YLRKRDHPSGSGLIYDNGSARTNSNPFYSVFGKAGVEQSLRQNQGTIRTLLNKNEECQSL 950
Query: 1982 IILSSSNYFRMGPLTDVKYHNVIKQSIPIQKGSLTPIRNSLGPLGTALQIENFYSFYYLI 2161
IILSSSNYFRMGPL DVKYHNVIKQSIPIQK SLTPI+ SLGPLGT LQI NFYSFYY
Sbjct: 951 IILSSSNYFRMGPLNDVKYHNVIKQSIPIQKDSLTPIKTSLGPLGTFLQIANFYSFYY-- 1008
Query: 2162 TLITHNHLSVTKYLKLDNLKQPCQVLKYYLMDENGEISNPDTDSKIILNPFNLNWYFLHH 2341
LITHNH+SVTKYLKLDNLKQP QVLKYYLMDENGEI NPDTDSKI+LNPFNLNWYFL
Sbjct: 1009 -LITHNHISVTKYLKLDNLKQPFQVLKYYLMDENGEIYNPDTDSKILLNPFNLNWYFLQP 1067
Query: 2342 NYCEEMSPIISLGQFLCENVCITKNGPHLKSGQVLIVQVNSVVIRSAKPYLATPGATVHG 2521
NYCEEMSPIISLGQF CENV ITK GPHLKSGQVLIVQVNSVVIRSAKPYLATPGATVHG
Sbjct: 1068 NYCEEMSPIISLGQFFCENVRITKRGPHLKSGQVLIVQVNSVVIRSAKPYLATPGATVHG 1127
Query: 2522 HYGEILYEGDTLVTFIYEKSRSGDITQGLPKVEQVLEVRSLDSISMNLEKRVEGWNARIT 2701
HYG ILYEGDTLVTFIYEKSRSGDITQGLPKVEQVLEVRSLDSISMNLEKRVEGWNA IT
Sbjct: 1128 HYGAILYEGDTLVTFIYEKSRSGDITQGLPKVEQVLEVRSLDSISMNLEKRVEGWNASIT 1187
Query: 2702 RILGIPWGFLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQITSKVLVSEA 2881
RILGIPWGFLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQITSKVLVSE
Sbjct: 1188 RILGIPWGFLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQITSKVLVSED 1247
Query: 2882 GMSNIFLPGELIGLLRAERTGRALEEVICYRAILLGITRASLNTQSFISEASFQETTRVL 3061
GMS IFLPGELIGLLRAER GRALEEVICYRAILLGITRASLNTQSFISEASFQETTRVL
Sbjct: 1248 GMSTIFLPGELIGLLRAERMGRALEEVICYRAILLGITRASLNTQSFISEASFQETTRVL 1307
Query: 3062 AKAALRGRIDWLKGLKENVVLGGIIPVGTGFKGLVHC--SRQHNTILLERQKGNLFGGEM 3235
AKAALRGRIDWLKGLKENVVLGGIIPVGTGFKGLVHC SRQHN I ERQK NLFGGEM
Sbjct: 1308 AKAALRGRIDWLKGLKENVVLGGIIPVGTGFKGLVHCSRSRQHNNIFFERQKRNLFGGEM 1367
Query: 3236 RDIFLHHRELFDSCISTTFHDTSE 3307
RDIFLHHRELFDSCISTTFHDTSE
Sbjct: 1368 RDIFLHHRELFDSCISTTFHDTSE 1391
>YP_009019878.1 RNA polymerase beta' subunit (chloroplast) [Azadirachta indica]
AHJ91308.1 RNA polymerase beta' subunit (chloroplast)
[Azadirachta indica]
Length = 1395
Score = 1921 bits (4977), Expect = 0.0
Identities = 974/1111 (87%), Positives = 1006/1111 (90%)
Frame = +2
Query: 2 PFTCRSTSWICRLCYGRSPTHGDLVELGEAVGIISGQSIGEPGTQLTLRXXXXXXXXXXX 181
PFTCRSTSWICRLCYGRSPTH DLVELGEAVGIISGQSIGEPGTQLTLR
Sbjct: 288 PFTCRSTSWICRLCYGRSPTHSDLVELGEAVGIISGQSIGEPGTQLTLRTFHTGGVFTGG 347
Query: 182 XAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCSIDLDVIIESEDIMHNVTIPPKSFLL 361
AEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLC IDL VIIESEDIMHNV+IPPKSFLL
Sbjct: 348 TAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYVIIESEDIMHNVSIPPKSFLL 407
Query: 362 VQNDQYVESEQVIAEIQAGAYTLNFKERVRKHIYSDSEGEMHWSTDVYHAPEFTYSNVHL 541
VQNDQYVESEQVIAEI+AGAYTLNFKERVRKHIYSDSEGEMHWSTDVYHAPEFTYSNVHL
Sbjct: 408 VQNDQYVESEQVIAEIRAGAYTLNFKERVRKHIYSDSEGEMHWSTDVYHAPEFTYSNVHL 467
Query: 542 LPKTSHLWILSGGSCRSSVVSFSLYKDQDQMNIHSLSVERREISSLSLSVNNDQARHKLF 721
LPKTSHLWILSGGSCRSS VSFSL+KDQDQMNIHSLSVERR+ISSLSLSVNNDQARHKLF
Sbjct: 468 LPKTSHLWILSGGSCRSSAVSFSLHKDQDQMNIHSLSVERRDISSLSLSVNNDQARHKLF 527
Query: 722 SSAFSAKKEGGILEMSDYSGFNRIIGTGHCNLIHPAILRANSNLLAKRQRNRFLIPFHSI 901
SS FSAKKEGGI E+ DYSGFN++IGTGH NLIHP+I NS+LLAKR+RNRFLIPF SI
Sbjct: 528 SSYFSAKKEGGIFEIPDYSGFNQMIGTGHSNLIHPSIRHENSDLLAKRRRNRFLIPFQSI 587
Query: 902 QEQEKELMPHXXXXXXXXXXXXFRRNSILAYFDDPRYRRKSSGITKYGTLGAHSIVKKED 1081
QEQEKELMPH FRRNSILAYFDDPRYRRKSSGITKYGTLGAHSIVKKED
Sbjct: 588 QEQEKELMPHLGISIEIPIKGIFRRNSILAYFDDPRYRRKSSGITKYGTLGAHSIVKKED 647
Query: 1082 LIEYRGLKKIKPKYQIKIDRLFFIPEEVHFFPESSYLMVRNNSIIGVDTRITLNIRSRVG 1261
LIEYRGLKKIKPKYQ+KIDR FFIPEEVH PESSY+MVRNNSIIGVDTRITLNIRSRVG
Sbjct: 648 LIEYRGLKKIKPKYQMKIDRFFFIPEEVHTLPESSYVMVRNNSIIGVDTRITLNIRSRVG 707
Query: 1262 GLVRIERKKGGIELKIFSGDIHFPGEIDKISRHSGILIPPXXXXXXXXXXXXXXXXXXXW 1441
GLVR+ERKKGGIELKIFSGDIHFPGE DKISRHSGILIPP W
Sbjct: 708 GLVRMERKKGGIELKIFSGDIHFPGETDKISRHSGILIPPEKGKKKLKESTKESKKLKKW 767
Query: 1442 IYVQRITPTKKKYFVLVRPVVTYEIADGINLATLFPQDPLREKDNMQFRVVNYVLYGKGK 1621
IYVQRITP KKKYFVLVRPVVTY+IADGINLATLFPQD LREKDNMQFRVVNYVLYGKGK
Sbjct: 768 IYVQRITPAKKKYFVLVRPVVTYQIADGINLATLFPQDLLREKDNMQFRVVNYVLYGKGK 827
Query: 1622 AARGIPDTSIQLVRTCLVLNWDQDKKSSSVEEVCASFVEVRTNGLIRDFLRLNLVKSQIS 1801
RGI DTSIQLVR CLVLNWDQDKKSSS+EEVCASFVEV TNGLIRDFLR+NLVKSQIS
Sbjct: 828 PTRGISDTSIQLVRICLVLNWDQDKKSSSIEEVCASFVEVSTNGLIRDFLRINLVKSQIS 887
Query: 1802 YIRKRNHPSGSGLISDNGSVRTNSNPFYSVFGKAGVEQSLSQNQGTIRTLLNRNKECQSL 1981
YIRKRN PSGSGLISDNGS RTN+NPFYS++ KA VEQSLSQNQGTIRTLLNRNKE QSL
Sbjct: 888 YIRKRNDPSGSGLISDNGSDRTNTNPFYSIYFKARVEQSLSQNQGTIRTLLNRNKESQSL 947
Query: 1982 IILSSSNYFRMGPLTDVKYHNVIKQSIPIQKGSLTPIRNSLGPLGTALQIENFYSFYYLI 2161
IILSSSN FRMGP DVKYHNVIKQSI IQK SL I+NSLGP+GT LQI NFYSFYY
Sbjct: 948 IILSSSNCFRMGPFNDVKYHNVIKQSIKIQKDSLIRIKNSLGPVGTVLQIANFYSFYY-- 1005
Query: 2162 TLITHNHLSVTKYLKLDNLKQPCQVLKYYLMDENGEISNPDTDSKIILNPFNLNWYFLHH 2341
LITHN +S TKYLKL+NLKQ QV KYYLMDENGEI NPD DSKI+LNPFNLNWYFL+H
Sbjct: 1006 -LITHNQISATKYLKLNNLKQLFQVFKYYLMDENGEIYNPDPDSKIVLNPFNLNWYFLYH 1064
Query: 2342 NYCEEMSPIISLGQFLCENVCITKNGPHLKSGQVLIVQVNSVVIRSAKPYLATPGATVHG 2521
NYCEEMS II+LGQ +CENVCI KNGPHLKSGQVLIVQV+SVVIRSAKPYLATPGATVHG
Sbjct: 1065 NYCEEMSTIINLGQLICENVCIAKNGPHLKSGQVLIVQVDSVVIRSAKPYLATPGATVHG 1124
Query: 2522 HYGEILYEGDTLVTFIYEKSRSGDITQGLPKVEQVLEVRSLDSISMNLEKRVEGWNARIT 2701
HYGEILYEGDTLVTFIYEKSRSGDITQGLPKVEQVLEVRS+DSISMNLEKRVEGWNARIT
Sbjct: 1125 HYGEILYEGDTLVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMNLEKRVEGWNARIT 1184
Query: 2702 RILGIPWGFLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQITSKVLVSEA 2881
RILGIPWGFLIGAELT+VQSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQITSKVLVSE
Sbjct: 1185 RILGIPWGFLIGAELTLVQSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQITSKVLVSED 1244
Query: 2882 GMSNIFLPGELIGLLRAERTGRALEEVICYRAILLGITRASLNTQSFISEASFQETTRVL 3061
GMSN+FLPGE+IGLLRAERTGRALEE I YRAILLGITRASLNTQSFISEASFQET RVL
Sbjct: 1245 GMSNVFLPGEIIGLLRAERTGRALEEAIRYRAILLGITRASLNTQSFISEASFQETARVL 1304
Query: 3062 AKAALRGRIDWLKGLKENVVLGGIIPVGTGFKGLVHCSRQHNTILLERQKGNLFGGEMRD 3241
AKAALRGRIDWLKGLKENVVLGGIIPVGTGFKGLVHCSRQHN I LE K NLF GEMRD
Sbjct: 1305 AKAALRGRIDWLKGLKENVVLGGIIPVGTGFKGLVHCSRQHNNIFLETPKKNLFRGEMRD 1364
Query: 3242 IFLHHRELFDSCISTTFHDTSEQLLRGFNES 3334
FLHHRELF SCISTTFHDTSEQLLRGFNES
Sbjct: 1365 SFLHHRELFASCISTTFHDTSEQLLRGFNES 1395
>YP_009259777.1 RNA polymerase beta' subunit (chloroplast) [Leitneria floridana]
ANC29179.1 RNA polymerase beta' subunit (chloroplast)
[Leitneria floridana]
Length = 1405
Score = 1851 bits (4795), Expect = 0.0
Identities = 954/1121 (85%), Positives = 986/1121 (87%), Gaps = 10/1121 (0%)
Frame = +2
Query: 2 PFTCRSTSWICRLCYGRSPTHGDLVELGEAVGIISGQSIGEPGTQLTLRXXXXXXXXXXX 181
PFTCRS SWICRLCYGRSPTHGDLVELGEAVGIISGQSIGEPGTQLTLR
Sbjct: 288 PFTCRSASWICRLCYGRSPTHGDLVELGEAVGIISGQSIGEPGTQLTLRTFHTGGVFTGG 347
Query: 182 XAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCSIDLDVIIESEDIMHNVTIPPKSFLL 361
AEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLC IDL VIIESED+MHNVTIPPKSFLL
Sbjct: 348 TAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYVIIESEDVMHNVTIPPKSFLL 407
Query: 362 VQNDQYVESEQVIAEIQAGAYTLNFKERVRKHIYSDSEGEMHWSTDVYHAPEFTYSNVHL 541
VQNDQYVESEQVIAEI+AGAYTLNFKERVRKHIYSDSEGEMHWSTDVYHAP+ TYSNVHL
Sbjct: 408 VQNDQYVESEQVIAEIRAGAYTLNFKERVRKHIYSDSEGEMHWSTDVYHAPQSTYSNVHL 467
Query: 542 LPKTSHLWILSGGSCRSSVVSFSLYKDQDQMNIHSLSVERREISSLSLSVNNDQARHKLF 721
LPKTS LWILSGGS RSSVVSFSL+KDQDQ+NIHSL VERR+ISSLSLSVNNDQ RHK
Sbjct: 468 LPKTSRLWILSGGSGRSSVVSFSLHKDQDQINIHSLFVERRDISSLSLSVNNDQTRHKFL 527
Query: 722 SSAFSAKKEGGILEMSDYSGFNRIIGTGHCNLIHPAILRANSNLLAKRQRNRFLIPFHSI 901
SS SAKKE GILE+ DYSGFNR IGTG+CNLIHP IL NS+LLAKR+RN+F+IPF SI
Sbjct: 528 SSGVSAKKEDGILEIPDYSGFNRTIGTGYCNLIHPVILHENSDLLAKRRRNQFIIPFQSI 587
Query: 902 QEQEKELMPHXXXXXXXXXXXXFRRNSILAYFDDPRYRRKSSGITKYGTLGAHSIVKKED 1081
QEQEKEL+PH FRRNSILAYFDDPRYRRKSSGITKYGTLGAHSIVKKED
Sbjct: 588 QEQEKELIPHSGISIEIPIKGIFRRNSILAYFDDPRYRRKSSGITKYGTLGAHSIVKKED 647
Query: 1082 LIEYRGLKKIKPKYQIKIDRLFFIPEEVHFFPESSYLMVRNNSIIGVDTRITLNIRSRVG 1261
LIEYRGLKKIKPK QIKIDR FFIPEEVH FPESSY+MVRNNSI+GVDTRITLNIRSRVG
Sbjct: 648 LIEYRGLKKIKPKCQIKIDRFFFIPEEVHTFPESSYVMVRNNSIVGVDTRITLNIRSRVG 707
Query: 1262 GLVRIER--KKGGIELKIFSGDIHFPGEIDKISRHSGILIPPXXXXXXXXXXXXXXXXXX 1435
GLVR++R KK GIELKIFSGDIHFPGE DKISRHSGILIPP
Sbjct: 708 GLVRMKRKKKKRGIELKIFSGDIHFPGETDKISRHSGILIPPERAKKKLKESTKESKKLK 767
Query: 1436 XWIYVQRITPTKKKYFVLVRPVV--TYEIADGINLATLFPQDPLREKDNMQFRVVNYVLY 1609
WIYVQRITP KKK FVLVRPVV TYEI DGINLATL PQD LREKDNMQFRVVNYVLY
Sbjct: 768 KWIYVQRITPAKKKSFVLVRPVVTFTYEIGDGINLATLLPQDRLREKDNMQFRVVNYVLY 827
Query: 1610 GKGKAARGIPDTSIQLVRTCLVLNWDQDKKSSSVEEVCASFVEVRTNGLIRDFLRLNLVK 1789
GK K RGI DTSIQLVRTCLVLNW QDKKSSS++EVCASFVEV TNGLIRDFLR+NLVK
Sbjct: 828 GKNKPTRGISDTSIQLVRTCLVLNWGQDKKSSSLKEVCASFVEVSTNGLIRDFLRINLVK 887
Query: 1790 S--QISYIRKRNHPSGSGLISDNGSVRTNSNPFYSVFGKAGVEQSLSQNQGTIRTLLNRN 1963
S ISYIRKR PSGSGLISDNGS RTN NPFYS++ KA EQS SQNQGTIRTLLNRN
Sbjct: 888 SHISISYIRKRKDPSGSGLISDNGSTRTNINPFYSIYFKARGEQSFSQNQGTIRTLLNRN 947
Query: 1964 KECQSLIILSSSNYFRMGPLTDVKYHNVIKQSIPIQKGSLTPIRNSLGPLGTALQIE--N 2137
KEC SLIILSSSN FRMGP DVKYHNVIKQSIPIQK S PIRNSLGPLGT LQI+ N
Sbjct: 948 KECHSLIILSSSNCFRMGPFNDVKYHNVIKQSIPIQKDSKIPIRNSLGPLGTVLQIQFAN 1007
Query: 2138 FYSFYYLITLITHNHLSV--TKYLKLDNLKQPCQVLKYYLMDENGEISNPDTDSKIILNP 2311
FYSFYY LITHN +SV TKYLKLDNLK+P Q++KYYLMDE GE N D DS IILNP
Sbjct: 1008 FYSFYY---LITHNQISVTKTKYLKLDNLKKPFQLIKYYLMDETGEFLNSDPDSNIILNP 1064
Query: 2312 FNLNWYFLHHNYCEEMSPIISLGQFLCENVCITKNGPHLKSGQVLIVQVNSVVIRSAKPY 2491
FNLNWYF HHNYCEEMS IISLGQFLCENV I KNGPHLKSGQVL VQV+SVVIRSAKPY
Sbjct: 1065 FNLNWYFFHHNYCEEMSTIISLGQFLCENVWIAKNGPHLKSGQVLTVQVDSVVIRSAKPY 1124
Query: 2492 LATPGATVHGHYGEILYEGDTLVTFIYEKSRSGDITQGLPKVEQVLEVRSLDSISMNLEK 2671
LATPGATVHGHYGEILYEGDTLVTFIYEKSRSGDITQGLPKVEQVLEVRS+DSISMNLEK
Sbjct: 1125 LATPGATVHGHYGEILYEGDTLVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMNLEK 1184
Query: 2672 RVEGWNARITRILGIPWGFLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQ 2851
RVEGWN ITRILGIPWGFLIGAELTIVQSRISLVNKIQ+VYRSQGVQIHNRHIEIIVRQ
Sbjct: 1185 RVEGWNTCITRILGIPWGFLIGAELTIVQSRISLVNKIQRVYRSQGVQIHNRHIEIIVRQ 1244
Query: 2852 ITSKVLVSEAGMSNIFLPGELIGLLRAERTGRALEEVICYRAILLGITRASLNTQSFISE 3031
ITSKVLVSE GMSN+FLPGELIGLLRAERTGRALEE ICYRA LLGITRASLNTQSFISE
Sbjct: 1245 ITSKVLVSEDGMSNVFLPGELIGLLRAERTGRALEEAICYRATLLGITRASLNTQSFISE 1304
Query: 3032 ASFQETTRVLAKAALRGRIDWLKGLKENVVLGGIIPVGTGFKGLVHCSRQHNTILLERQK 3211
ASFQET RVLAKAALRGRIDWLKGLKENVVLGGIIPVGTGFK LVHCSRQHNTILLE QK
Sbjct: 1305 ASFQETARVLAKAALRGRIDWLKGLKENVVLGGIIPVGTGFKRLVHCSRQHNTILLETQK 1364
Query: 3212 GNLFGGEMRDIFLHHRELFDSCISTTFHDTSEQLLRGFNES 3334
LFGG M DIFLHHRE FDS ISTTFHDTSEQLLRGFN+S
Sbjct: 1365 KTLFGGGMGDIFLHHREFFDSGISTTFHDTSEQLLRGFNQS 1405
>YP_009234205.1 RNA polymerase beta' subunit 2 (chloroplast) [Boswellia sacra]
AMB65072.1 RNA polymerase beta' subunit 2 (chloroplast)
[Boswellia sacra]
Length = 1391
Score = 1849 bits (4789), Expect = 0.0
Identities = 947/1112 (85%), Positives = 983/1112 (88%), Gaps = 1/1112 (0%)
Frame = +2
Query: 2 PFTCRSTSWICRLCYGRSPTHGDLVELGEAVGIISGQSIGEPGTQLTLRXXXXXXXXXXX 181
PFTCRSTSWICRLCYGRSPTHGDLVELGEAVGIISGQSIGEPGTQLTLR
Sbjct: 292 PFTCRSTSWICRLCYGRSPTHGDLVELGEAVGIISGQSIGEPGTQLTLRTFHTGGVFTGG 351
Query: 182 XAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCSIDLDVIIESEDIMHNVTIPPKSFLL 361
AEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCS DL VIIESEDIMHNVTIPPKSFLL
Sbjct: 352 TAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCSTDLYVIIESEDIMHNVTIPPKSFLL 411
Query: 362 VQNDQYVESEQVIAEIQAGAYTLNFKERVRKHIYSDSEGEMHWSTDVYHAPEFTYSNVHL 541
VQNDQYVESEQVIAEI+AG YTLNFKERVRKHIY+DSEGEMHWSTDVYHAPEF+YSNVHL
Sbjct: 412 VQNDQYVESEQVIAEIRAGTYTLNFKERVRKHIYADSEGEMHWSTDVYHAPEFSYSNVHL 471
Query: 542 LPKTSHLWILSGGSCRSSVVSFSLYKDQDQMNIHSLSVERREISSLSLSVNNDQARHKLF 721
LPKTSHLWILSG SCRS V+SFS++KDQDQMNIHSLS E+ ISSLS VNND+ RHKL
Sbjct: 472 LPKTSHLWILSGDSCRSGVISFSIHKDQDQMNIHSLSAEQNYISSLS--VNNDRVRHKLL 529
Query: 722 SSAFSAKKEGGILEMSDYSGFNRIIGTGHCNLIHPAILRANSNLLAKRQRNRFLIPFHSI 901
SS FS KKEGGI DYSGFNRIIGT HCNLIHPAIL NS+LLAKR+RNRFLIPF S
Sbjct: 530 SSDFSDKKEGGI---PDYSGFNRIIGTYHCNLIHPAILDKNSDLLAKRRRNRFLIPFQSS 586
Query: 902 QEQEKELMPHXXXXXXXXXXXXFRRNSILAYFDDPRYRRKSSGITKYGTLGAHSIVKKED 1081
QEQEKEL+P FRRNSILAYFDDPRYRRKSSGITKYGT+GAHSIVKKED
Sbjct: 587 QEQEKELIPPSGISIEIPLKGIFRRNSILAYFDDPRYRRKSSGITKYGTIGAHSIVKKED 646
Query: 1082 LIEYRGLKKIKPKYQIKIDRLFFIPEEVHFFPESSYLMVRNNSIIGVDTRITLNIRSRVG 1261
LIEY G+KKIKPKYQ+KIDR FFIPEEV+ PESSY+MVRNNSIIGVDTRITLNIRS+VG
Sbjct: 647 LIEYGGVKKIKPKYQMKIDRFFFIPEEVYTLPESSYVMVRNNSIIGVDTRITLNIRSQVG 706
Query: 1262 GLVRIERKKGGIELKIFSGDIHFPGEIDKISRHSGILIPPXXXXXXXXXXXXXXXXXXXW 1441
GLVR+ERKK G+ELKIFSGDIHFPGE DKISRHSGILIPP W
Sbjct: 707 GLVRVERKKRGVELKIFSGDIHFPGETDKISRHSGILIPPETGKKKLKESKKLKK----W 762
Query: 1442 IYVQRITPTKKKYFVLVRPVVTYEIADGINLATLFPQDPLREKDNMQFRVVNYVLYGKGK 1621
IYVQRITPTKKKYFVLVRPVVTYEIADGINLATLFPQD LREKDNMQ RVVNY+ YGKGK
Sbjct: 763 IYVQRITPTKKKYFVLVRPVVTYEIADGINLATLFPQDLLREKDNMQLRVVNYIPYGKGK 822
Query: 1622 AARGIPDTSIQLVRTCLVLNWDQDKKSSSVEE-VCASFVEVRTNGLIRDFLRLNLVKSQI 1798
RGI DTSIQLVRTCLVLNWDQDKK SS+EE VCASFVEV TNGLIRDFLR++LVKS I
Sbjct: 823 PTRGISDTSIQLVRTCLVLNWDQDKKGSSIEEEVCASFVEVSTNGLIRDFLRIDLVKSHI 882
Query: 1799 SYIRKRNHPSGSGLISDNGSVRTNSNPFYSVFGKAGVEQSLSQNQGTIRTLLNRNKECQS 1978
SYIRKRN PSGSGLISDNGS RTN NPFYS++ KA V+QSLSQNQGTIR LLNRNKECQS
Sbjct: 883 SYIRKRNDPSGSGLISDNGSDRTNINPFYSIYFKARVQQSLSQNQGTIRMLLNRNKECQS 942
Query: 1979 LIILSSSNYFRMGPLTDVKYHNVIKQSIPIQKGSLTPIRNSLGPLGTALQIENFYSFYYL 2158
L+ILSSSN FRMGP DVKYHNV+KQSI QK L PIRNSLGPLGT LQI NFYSFYYL
Sbjct: 943 LMILSSSNCFRMGPFNDVKYHNVLKQSIKSQKDPLIPIRNSLGPLGTVLQIANFYSFYYL 1002
Query: 2159 ITLITHNHLSVTKYLKLDNLKQPCQVLKYYLMDENGEISNPDTDSKIILNPFNLNWYFLH 2338
IT HN +SVTKYLKLDNLKQ QVLKYYLMDEN I NPD KI+LNPFNLNW+FLH
Sbjct: 1003 IT---HNQISVTKYLKLDNLKQTFQVLKYYLMDENRRIYNPDPYRKIVLNPFNLNWHFLH 1059
Query: 2339 HNYCEEMSPIISLGQFLCENVCITKNGPHLKSGQVLIVQVNSVVIRSAKPYLATPGATVH 2518
HNYCEEMS IISLGQF+CENVCI K GPHLKSGQVLIVQV SVVIRSAKPYLATPGATVH
Sbjct: 1060 HNYCEEMSTIISLGQFVCENVCIDKKGPHLKSGQVLIVQVESVVIRSAKPYLATPGATVH 1119
Query: 2519 GHYGEILYEGDTLVTFIYEKSRSGDITQGLPKVEQVLEVRSLDSISMNLEKRVEGWNARI 2698
GHYG+ LYEGDTLVTFIYEKSRSGDITQGLPKVEQVLEVRS+DSISMNLEKRVEGWNARI
Sbjct: 1120 GHYGDTLYEGDTLVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMNLEKRVEGWNARI 1179
Query: 2699 TRILGIPWGFLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQITSKVLVSE 2878
TRILGIPWGFLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQITSKVLVSE
Sbjct: 1180 TRILGIPWGFLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQITSKVLVSE 1239
Query: 2879 AGMSNIFLPGELIGLLRAERTGRALEEVICYRAILLGITRASLNTQSFISEASFQETTRV 3058
GMSN+FLPGELIGLLRAERTGRALEE ICYRAILLGITRASLNTQSFISEASFQET RV
Sbjct: 1240 DGMSNVFLPGELIGLLRAERTGRALEEGICYRAILLGITRASLNTQSFISEASFQETARV 1299
Query: 3059 LAKAALRGRIDWLKGLKENVVLGGIIPVGTGFKGLVHCSRQHNTILLERQKGNLFGGEMR 3238
LAKAALRGRIDWLKGLKENVVLGG+IPVGTGFKGLV SRQHN ILLE K NLFGGEMR
Sbjct: 1300 LAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKGLVPSSRQHNNILLETHKKNLFGGEMR 1359
Query: 3239 DIFLHHRELFDSCISTTFHDTSEQLLRGFNES 3334
DIFLHHRELFDSCIS T HD SEQ LRGFNES
Sbjct: 1360 DIFLHHRELFDSCISKTLHDLSEQSLRGFNES 1391
>YP_009257283.1 DNA-directed RNA polymerase beta'' chain (chloroplast) [Acer davidii]
ANG44483.1 DNA-directed RNA polymerase beta'' chain
(chloroplast) [Acer davidii]
Length = 1394
Score = 1837 bits (4759), Expect = 0.0
Identities = 935/1111 (84%), Positives = 976/1111 (87%)
Frame = +2
Query: 2 PFTCRSTSWICRLCYGRSPTHGDLVELGEAVGIISGQSIGEPGTQLTLRXXXXXXXXXXX 181
PFTCRSTSWICRLCYGRSPTHGDLVELGEAVGIISGQSIGEPGTQLTLR
Sbjct: 292 PFTCRSTSWICRLCYGRSPTHGDLVELGEAVGIISGQSIGEPGTQLTLRTFHTGGVFTGG 351
Query: 182 XAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCSIDLDVIIESEDIMHNVTIPPKSFLL 361
AEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLC IDL VIIESEDIMH VTIPPKSFLL
Sbjct: 352 IAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCDIDLYVIIESEDIMHKVTIPPKSFLL 411
Query: 362 VQNDQYVESEQVIAEIQAGAYTLNFKERVRKHIYSDSEGEMHWSTDVYHAPEFTYSNVHL 541
VQNDQYVESEQVIAEI+AG YTLNFKERVRKHIYSDSEGEMHWSTDVYHAPEF YSNV L
Sbjct: 412 VQNDQYVESEQVIAEIRAGTYTLNFKERVRKHIYSDSEGEMHWSTDVYHAPEFQYSNVRL 471
Query: 542 LPKTSHLWILSGGSCRSSVVSFSLYKDQDQMNIHSLSVERREISSLSLSVNNDQARHKLF 721
LPKTSHLWILSGGSCRS VVSFSL+KDQDQ+NIHS SVERR ISSLS VNNDQ RH+L
Sbjct: 472 LPKTSHLWILSGGSCRSGVVSFSLHKDQDQLNIHSHSVERRYISSLS--VNNDQVRHQLV 529
Query: 722 SSAFSAKKEGGILEMSDYSGFNRIIGTGHCNLIHPAILRANSNLLAKRQRNRFLIPFHSI 901
S FS KKE GIL DYSGFNRIIG GHCNLIHPAIL NS+LLAKR+RN+FLIPF SI
Sbjct: 530 RSDFSDKKEDGIL---DYSGFNRIIGIGHCNLIHPAILHKNSDLLAKRRRNQFLIPFQSI 586
Query: 902 QEQEKELMPHXXXXXXXXXXXXFRRNSILAYFDDPRYRRKSSGITKYGTLGAHSIVKKED 1081
QEQEKELMPH FR+NSILAYFDDPRYRRK+SGITKYGT+GAHSIVKKED
Sbjct: 587 QEQEKELMPHSGISIEIPIKGIFRKNSILAYFDDPRYRRKNSGITKYGTIGAHSIVKKED 646
Query: 1082 LIEYRGLKKIKPKYQIKIDRLFFIPEEVHFFPESSYLMVRNNSIIGVDTRITLNIRSRVG 1261
LIEYRG+KKIKPK+Q+KIDR FFIPEEVH PESSY+MVRNNSIIGVDTRI LN RS+VG
Sbjct: 647 LIEYRGVKKIKPKFQMKIDRFFFIPEEVHILPESSYVMVRNNSIIGVDTRIALNRRSQVG 706
Query: 1262 GLVRIERKKGGIELKIFSGDIHFPGEIDKISRHSGILIPPXXXXXXXXXXXXXXXXXXXW 1441
GLVR+E+KK IELKIFSGDIHFPGE DKISRHSGILIPP W
Sbjct: 707 GLVRVEKKKKKIELKIFSGDIHFPGETDKISRHSGILIPPETGKKELKEYTRESKKLKKW 766
Query: 1442 IYVQRITPTKKKYFVLVRPVVTYEIADGINLATLFPQDPLREKDNMQFRVVNYVLYGKGK 1621
IYVQRITPTKKK+FVLVRPVVTYEIA+GINLATLFPQD LREKDNM RVVNY+LYGKGK
Sbjct: 767 IYVQRITPTKKKHFVLVRPVVTYEIANGINLATLFPQDLLREKDNMHLRVVNYILYGKGK 826
Query: 1622 AARGIPDTSIQLVRTCLVLNWDQDKKSSSVEEVCASFVEVRTNGLIRDFLRLNLVKSQIS 1801
RGI DTSIQLVRTCLVLNWDQDKKSSSVEEVCASFVEV TNG+IRDFLR++LV+S IS
Sbjct: 827 PFRGISDTSIQLVRTCLVLNWDQDKKSSSVEEVCASFVEVSTNGMIRDFLRIDLVQSHIS 886
Query: 1802 YIRKRNHPSGSGLISDNGSVRTNSNPFYSVFGKAGVEQSLSQNQGTIRTLLNRNKECQSL 1981
YIRKRN PS GLISDNG RTN NPFYS++ KA V+QSLSQNQGTI TLLNRNKECQSL
Sbjct: 887 YIRKRNAPSSPGLISDNGPDRTNLNPFYSIYFKARVQQSLSQNQGTIHTLLNRNKECQSL 946
Query: 1982 IILSSSNYFRMGPLTDVKYHNVIKQSIPIQKGSLTPIRNSLGPLGTALQIENFYSFYYLI 2161
IILSSSN FRMGP D+KYHNVIKQSI IQK L PIRNSLGPLGT LQI NFYSFYYLI
Sbjct: 947 IILSSSNCFRMGPFNDIKYHNVIKQSIHIQKDPLIPIRNSLGPLGTVLQIANFYSFYYLI 1006
Query: 2162 TLITHNHLSVTKYLKLDNLKQPCQVLKYYLMDENGEISNPDTDSKIILNPFNLNWYFLHH 2341
T +N +SVT YLKLDNLKQ QV K+YLMDEN +I NPD DSKI+LNPFNLNWYF+HH
Sbjct: 1007 T---YNPISVTNYLKLDNLKQTFQVRKFYLMDENEKIYNPDPDSKIVLNPFNLNWYFIHH 1063
Query: 2342 NYCEEMSPIISLGQFLCENVCITKNGPHLKSGQVLIVQVNSVVIRSAKPYLATPGATVHG 2521
NYCEEMS I+SLGQF+CEN+CI NGPHLKSGQVLIVQ SVVIRSAKPYLATPGATVHG
Sbjct: 1064 NYCEEMSTIMSLGQFICENICIATNGPHLKSGQVLIVQAGSVVIRSAKPYLATPGATVHG 1123
Query: 2522 HYGEILYEGDTLVTFIYEKSRSGDITQGLPKVEQVLEVRSLDSISMNLEKRVEGWNARIT 2701
HYGEILYEGDTL+TFIYEKSRSGDITQGLPKVEQVLEVRS+DSISMNLEKRVEGWNARIT
Sbjct: 1124 HYGEILYEGDTLITFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMNLEKRVEGWNARIT 1183
Query: 2702 RILGIPWGFLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQITSKVLVSEA 2881
RILGIPWGFLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQITSKVLVSE
Sbjct: 1184 RILGIPWGFLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQITSKVLVSED 1243
Query: 2882 GMSNIFLPGELIGLLRAERTGRALEEVICYRAILLGITRASLNTQSFISEASFQETTRVL 3061
GMSNIFLPGELIGLLRAERTGRALEE ICYRAILLGITRASLNTQSFISEASFQET RVL
Sbjct: 1244 GMSNIFLPGELIGLLRAERTGRALEEAICYRAILLGITRASLNTQSFISEASFQETARVL 1303
Query: 3062 AKAALRGRIDWLKGLKENVVLGGIIPVGTGFKGLVHCSRQHNTILLERQKGNLFGGEMRD 3241
AKAALRGRIDWLKGLKENVVLGG+IPVGTGFK LVHCSRQHN ILLE +K GG M D
Sbjct: 1304 AKAALRGRIDWLKGLKENVVLGGMIPVGTGFKALVHCSRQHNNILLETKKRIYSGGGMID 1363
Query: 3242 IFLHHRELFDSCISTTFHDTSEQLLRGFNES 3334
IFLHHREL D CIS T HDTSEQ RGFNES
Sbjct: 1364 IFLHHRELLDFCISKTLHDTSEQSFRGFNES 1394
>YP_009262281.1 RNA polymerase beta'' subunit (chloroplast) [Spondias tuberosa]
ANI86808.1 RNA polymerase beta'' subunit (chloroplast)
[Spondias tuberosa]
Length = 1394
Score = 1831 bits (4742), Expect = 0.0
Identities = 937/1111 (84%), Positives = 976/1111 (87%)
Frame = +2
Query: 2 PFTCRSTSWICRLCYGRSPTHGDLVELGEAVGIISGQSIGEPGTQLTLRXXXXXXXXXXX 181
PFTCRSTSWICRLCYGRS THGDLVELGEAVGIISGQSIGEPGTQLTLR
Sbjct: 292 PFTCRSTSWICRLCYGRSSTHGDLVELGEAVGIISGQSIGEPGTQLTLRTFHTGGVFTGG 351
Query: 182 XAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCSIDLDVIIESEDIMHNVTIPPKSFLL 361
AE VRAPSNGKIKFNEDLVHPTRTRHGHPAFLC IDL VIIESEDIMHNVTIPPKSFLL
Sbjct: 352 TAEQVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYVIIESEDIMHNVTIPPKSFLL 411
Query: 362 VQNDQYVESEQVIAEIQAGAYTLNFKERVRKHIYSDSEGEMHWSTDVYHAPEFTYSNVHL 541
VQN+QYVESEQVIAEI+A YTLNFKERVRKHIY+DSEGEMHWSTDVYHAPEFTYSNVHL
Sbjct: 412 VQNNQYVESEQVIAEIRARTYTLNFKERVRKHIYADSEGEMHWSTDVYHAPEFTYSNVHL 471
Query: 542 LPKTSHLWILSGGSCRSSVVSFSLYKDQDQMNIHSLSVERREISSLSLSVNNDQARHKLF 721
LPKTSHLWILSGGS +SSVVSFSL+KDQDQ+NIHSLSVE+R ISSLS VNNDQARHK F
Sbjct: 472 LPKTSHLWILSGGSSKSSVVSFSLHKDQDQINIHSLSVEQRLISSLS--VNNDQARHKFF 529
Query: 722 SSAFSAKKEGGILEMSDYSGFNRIIGTGHCNLIHPAILRANSNLLAKRQRNRFLIPFHSI 901
SS FS KKEG I DYSGFNRIIGTGHCNLIHP IL NS+LLAKR+RNRFL+PF SI
Sbjct: 530 SSDFSDKKEGRI---PDYSGFNRIIGTGHCNLIHPGILHKNSDLLAKRRRNRFLLPFQSI 586
Query: 902 QEQEKELMPHXXXXXXXXXXXXFRRNSILAYFDDPRYRRKSSGITKYGTLGAHSIVKKED 1081
QE EKELMP FRRNSILAYFDDPRYRRKSSGITKYGT+GAHSIVKKED
Sbjct: 587 QEHEKELMPLSGISIEIPIKGIFRRNSILAYFDDPRYRRKSSGITKYGTIGAHSIVKKED 646
Query: 1082 LIEYRGLKKIKPKYQIKIDRLFFIPEEVHFFPESSYLMVRNNSIIGVDTRITLNIRSRVG 1261
LIEYRG+KKIK KYQ+KIDR FFIPEEV+ PESSY+MVRNNSIIGVDTRITL IRS+VG
Sbjct: 647 LIEYRGVKKIKQKYQMKIDRFFFIPEEVYTLPESSYVMVRNNSIIGVDTRITLTIRSQVG 706
Query: 1262 GLVRIERKKGGIELKIFSGDIHFPGEIDKISRHSGILIPPXXXXXXXXXXXXXXXXXXXW 1441
GLVR+ERKK IELKIFSGDIHFPGE DKISRHSGILIPP W
Sbjct: 707 GLVRVERKKKRIELKIFSGDIHFPGETDKISRHSGILIPPETGKNKLKESNKESKKLKKW 766
Query: 1442 IYVQRITPTKKKYFVLVRPVVTYEIADGINLATLFPQDPLREKDNMQFRVVNYVLYGKGK 1621
IYVQRITPTKKKYFVLVRPVVTYEIADGIN A LF QD LREKDNMQ RVVNY+LYGKGK
Sbjct: 767 IYVQRITPTKKKYFVLVRPVVTYEIADGINFARLFSQDLLREKDNMQLRVVNYILYGKGK 826
Query: 1622 AARGIPDTSIQLVRTCLVLNWDQDKKSSSVEEVCASFVEVRTNGLIRDFLRLNLVKSQIS 1801
RGI DTSIQLVRTCLVLNWDQDKK SS+EEVCASFVEV TNGLIRDFLR++LVKS IS
Sbjct: 827 PTRGISDTSIQLVRTCLVLNWDQDKKDSSIEEVCASFVEVSTNGLIRDFLRIDLVKSHIS 886
Query: 1802 YIRKRNHPSGSGLISDNGSVRTNSNPFYSVFGKAGVEQSLSQNQGTIRTLLNRNKECQSL 1981
YIRKRN PSGSGLISDNGS RTN NPFYS++ KA V+Q LSQ+QGTIRTLLNRNKECQSL
Sbjct: 887 YIRKRNDPSGSGLISDNGSDRTNINPFYSIYFKARVQQLLSQHQGTIRTLLNRNKECQSL 946
Query: 1982 IILSSSNYFRMGPLTDVKYHNVIKQSIPIQKGSLTPIRNSLGPLGTALQIENFYSFYYLI 2161
+ILSSSN FR+GP D K HNVIKQSIPI K L PIRNSLGPLGT L+I NFYSFYYLI
Sbjct: 947 MILSSSNSFRIGPFNDGKCHNVIKQSIPIPKDPLIPIRNSLGPLGTVLEIANFYSFYYLI 1006
Query: 2162 TLITHNHLSVTKYLKLDNLKQPCQVLKYYLMDENGEISNPDTDSKIILNPFNLNWYFLHH 2341
T HN +SVTKYLKLDNLKQ Q+ KYYLMDEN I NPD SKI+LNPFNLNWYFLHH
Sbjct: 1007 T---HNQISVTKYLKLDNLKQTFQIFKYYLMDENRRIYNPDPYSKIVLNPFNLNWYFLHH 1063
Query: 2342 NYCEEMSPIISLGQFLCENVCITKNGPHLKSGQVLIVQVNSVVIRSAKPYLATPGATVHG 2521
NYCEEMS IISLGQF+CENV I K GPHLKSGQVLIVQV+SVVIRSAKPYLATPGATVHG
Sbjct: 1064 NYCEEMSTIISLGQFICENVWIAKKGPHLKSGQVLIVQVDSVVIRSAKPYLATPGATVHG 1123
Query: 2522 HYGEILYEGDTLVTFIYEKSRSGDITQGLPKVEQVLEVRSLDSISMNLEKRVEGWNARIT 2701
HYGEILYEGDTLVTFIYEKSRSGDITQGLPKVEQVLEVRS+DSISMNLEKRVEGWNA +T
Sbjct: 1124 HYGEILYEGDTLVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMNLEKRVEGWNALLT 1183
Query: 2702 RILGIPWGFLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQITSKVLVSEA 2881
RILGIPWGFLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQITSKV+VSE
Sbjct: 1184 RILGIPWGFLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQITSKVVVSED 1243
Query: 2882 GMSNIFLPGELIGLLRAERTGRALEEVICYRAILLGITRASLNTQSFISEASFQETTRVL 3061
GMSN+FLPGELIGLLRAER GRALEE ICYRAILLGITRASLNTQSFISEASFQET RVL
Sbjct: 1244 GMSNVFLPGELIGLLRAERMGRALEEGICYRAILLGITRASLNTQSFISEASFQETARVL 1303
Query: 3062 AKAALRGRIDWLKGLKENVVLGGIIPVGTGFKGLVHCSRQHNTILLERQKGNLFGGEMRD 3241
AKAALRGRIDWLKGLKENVVLGG+IPVGTGFKGLVH SRQHN IL E + N FGG MRD
Sbjct: 1304 AKAALRGRIDWLKGLKENVVLGGMIPVGTGFKGLVHFSRQHNNILFETETKNFFGGGMRD 1363
Query: 3242 IFLHHRELFDSCISTTFHDTSEQLLRGFNES 3334
IFLHHRELFDSCIS T HDTSEQ LRGFNES
Sbjct: 1364 IFLHHRELFDSCISKTLHDTSEQSLRGFNES 1394
>YP_009262195.1 RNA polymerase beta'' subunit (chloroplast) [Spondias bahiensis]
ANI86722.1 RNA polymerase beta'' subunit (chloroplast)
[Spondias bahiensis]
Length = 1390
Score = 1828 bits (4735), Expect = 0.0
Identities = 937/1111 (84%), Positives = 977/1111 (87%)
Frame = +2
Query: 2 PFTCRSTSWICRLCYGRSPTHGDLVELGEAVGIISGQSIGEPGTQLTLRXXXXXXXXXXX 181
PFTCRSTSWICRLCYGRS THGDLVELGEAVGIISGQSIGEPGTQLTLR
Sbjct: 292 PFTCRSTSWICRLCYGRSSTHGDLVELGEAVGIISGQSIGEPGTQLTLRTFHTGGVFTGG 351
Query: 182 XAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCSIDLDVIIESEDIMHNVTIPPKSFLL 361
AE VRAPSNGKIKFNEDLVHPTRTRHGHPAFLC IDL VIIESEDIMHNVTIPPKSFLL
Sbjct: 352 TAEQVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYVIIESEDIMHNVTIPPKSFLL 411
Query: 362 VQNDQYVESEQVIAEIQAGAYTLNFKERVRKHIYSDSEGEMHWSTDVYHAPEFTYSNVHL 541
VQN+QYVESEQVIAEI+A YTLNFKERVRKHIY+DSEGEMHWSTDVYHAPEFTYSNVHL
Sbjct: 412 VQNNQYVESEQVIAEIRARTYTLNFKERVRKHIYADSEGEMHWSTDVYHAPEFTYSNVHL 471
Query: 542 LPKTSHLWILSGGSCRSSVVSFSLYKDQDQMNIHSLSVERREISSLSLSVNNDQARHKLF 721
LPKTSHLWILSGGS +SSVVSFSL+KDQDQ+NIHSLSVE+R ISSLS VNNDQARHK F
Sbjct: 472 LPKTSHLWILSGGSSKSSVVSFSLHKDQDQINIHSLSVEQRLISSLS--VNNDQARHKFF 529
Query: 722 SSAFSAKKEGGILEMSDYSGFNRIIGTGHCNLIHPAILRANSNLLAKRQRNRFLIPFHSI 901
SS FS KKEGGI DYSGFNRIIGTGHCNLIHP IL NS+LLAKR+RNRFL+PF SI
Sbjct: 530 SSDFSDKKEGGI---PDYSGFNRIIGTGHCNLIHPGILHKNSDLLAKRRRNRFLLPFQSI 586
Query: 902 QEQEKELMPHXXXXXXXXXXXXFRRNSILAYFDDPRYRRKSSGITKYGTLGAHSIVKKED 1081
QE EKELMP FRRNSILAYFDDPRYRRKSSGITKYGT+GAHSIVKKED
Sbjct: 587 QEHEKELMPLSGISIEIPIKGIFRRNSILAYFDDPRYRRKSSGITKYGTIGAHSIVKKED 646
Query: 1082 LIEYRGLKKIKPKYQIKIDRLFFIPEEVHFFPESSYLMVRNNSIIGVDTRITLNIRSRVG 1261
LIEYRG+KKIK KYQ+KIDR FFIPEEV+ PESSY+MVRNNSIIGVDTRITL IRS+VG
Sbjct: 647 LIEYRGVKKIKQKYQMKIDRFFFIPEEVYTLPESSYVMVRNNSIIGVDTRITLTIRSQVG 706
Query: 1262 GLVRIERKKGGIELKIFSGDIHFPGEIDKISRHSGILIPPXXXXXXXXXXXXXXXXXXXW 1441
GLVR+ERKK IELKIFSGDIHFPGE DKISRHSGILIPP W
Sbjct: 707 GLVRVERKKKRIELKIFSGDIHFPGETDKISRHSGILIPPETGKNKLKESKKLKK----W 762
Query: 1442 IYVQRITPTKKKYFVLVRPVVTYEIADGINLATLFPQDPLREKDNMQFRVVNYVLYGKGK 1621
IYVQRITPTKKKYFVLVRPVVTYEIADGIN A LF Q+ LREKDNMQ RVVNY+LYGKGK
Sbjct: 763 IYVQRITPTKKKYFVLVRPVVTYEIADGINFARLFSQELLREKDNMQLRVVNYILYGKGK 822
Query: 1622 AARGIPDTSIQLVRTCLVLNWDQDKKSSSVEEVCASFVEVRTNGLIRDFLRLNLVKSQIS 1801
RGI DTSIQLVRTCLVLNWDQDKK SS+EEVCASFVEV TNGLIRDFLR++LVKS IS
Sbjct: 823 PTRGISDTSIQLVRTCLVLNWDQDKKDSSIEEVCASFVEVSTNGLIRDFLRIDLVKSHIS 882
Query: 1802 YIRKRNHPSGSGLISDNGSVRTNSNPFYSVFGKAGVEQSLSQNQGTIRTLLNRNKECQSL 1981
YIRKRN PSGSGLISDNGS RTN NPFYS++ KA V+Q LSQ+QGTIRTLLNRNKECQSL
Sbjct: 883 YIRKRNDPSGSGLISDNGSDRTNINPFYSIYFKARVQQLLSQHQGTIRTLLNRNKECQSL 942
Query: 1982 IILSSSNYFRMGPLTDVKYHNVIKQSIPIQKGSLTPIRNSLGPLGTALQIENFYSFYYLI 2161
+ILSSSN FR+GP D K HNVIKQSIPI K L PIRNSLGPLGT L+I NFYSFYYLI
Sbjct: 943 MILSSSNSFRIGPFNDGKCHNVIKQSIPIPKDPLIPIRNSLGPLGTVLEIANFYSFYYLI 1002
Query: 2162 TLITHNHLSVTKYLKLDNLKQPCQVLKYYLMDENGEISNPDTDSKIILNPFNLNWYFLHH 2341
T HN +SVTKYLKLDNLKQ Q+ KYYLMDEN I NPD SKI+LNPFNLNWYFLHH
Sbjct: 1003 T---HNQISVTKYLKLDNLKQTFQIFKYYLMDENRRIYNPDPYSKIVLNPFNLNWYFLHH 1059
Query: 2342 NYCEEMSPIISLGQFLCENVCITKNGPHLKSGQVLIVQVNSVVIRSAKPYLATPGATVHG 2521
NYCEEMS IISLGQF+CENV I K GPHLKSGQVLIVQV+SVVIRSAKPYLATPGATVHG
Sbjct: 1060 NYCEEMSTIISLGQFICENVWIAKKGPHLKSGQVLIVQVDSVVIRSAKPYLATPGATVHG 1119
Query: 2522 HYGEILYEGDTLVTFIYEKSRSGDITQGLPKVEQVLEVRSLDSISMNLEKRVEGWNARIT 2701
HYGEILYEGDTLVTFIYEKSRSGDITQGLPKVEQVLEVRS+DSISMNLEKRVEGWNA +T
Sbjct: 1120 HYGEILYEGDTLVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMNLEKRVEGWNALLT 1179
Query: 2702 RILGIPWGFLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQITSKVLVSEA 2881
RILGIPWGFLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQITSKV+VSE
Sbjct: 1180 RILGIPWGFLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQITSKVVVSED 1239
Query: 2882 GMSNIFLPGELIGLLRAERTGRALEEVICYRAILLGITRASLNTQSFISEASFQETTRVL 3061
GMSN+FLPGELIGLLRAER GRALEE ICYRAILLGITRASLNTQSFISEASFQET RVL
Sbjct: 1240 GMSNVFLPGELIGLLRAERMGRALEEGICYRAILLGITRASLNTQSFISEASFQETARVL 1299
Query: 3062 AKAALRGRIDWLKGLKENVVLGGIIPVGTGFKGLVHCSRQHNTILLERQKGNLFGGEMRD 3241
AKAALRGRIDWLKGLKENVVLGG+IPVGTGFKGLVH SRQHN IL E + N FGG MRD
Sbjct: 1300 AKAALRGRIDWLKGLKENVVLGGMIPVGTGFKGLVHFSRQHNNILFETETKNFFGGGMRD 1359
Query: 3242 IFLHHRELFDSCISTTFHDTSEQLLRGFNES 3334
IFLHHRELFDSCIS T HDTSEQ LRGFNES
Sbjct: 1360 IFLHHRELFDSCISKTLHDTSEQSLRGFNES 1390
>AHF71465.1 DNA-directed RNA polymerase beta'' chain (chloroplast) [Acer
buergerianum subsp. ningpoense]
Length = 1394
Score = 1821 bits (4717), Expect = 0.0
Identities = 925/1111 (83%), Positives = 969/1111 (87%)
Frame = +2
Query: 2 PFTCRSTSWICRLCYGRSPTHGDLVELGEAVGIISGQSIGEPGTQLTLRXXXXXXXXXXX 181
PFTCRSTSWICRLCYGRSPTHGDLVELGEAVGIISGQSIGEPGTQLTLR
Sbjct: 292 PFTCRSTSWICRLCYGRSPTHGDLVELGEAVGIISGQSIGEPGTQLTLRTFHTGGVFTGG 351
Query: 182 XAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCSIDLDVIIESEDIMHNVTIPPKSFLL 361
AEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLC IDL VIIESEDIMH VTIPPKSFLL
Sbjct: 352 IAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCDIDLYVIIESEDIMHKVTIPPKSFLL 411
Query: 362 VQNDQYVESEQVIAEIQAGAYTLNFKERVRKHIYSDSEGEMHWSTDVYHAPEFTYSNVHL 541
VQNDQYVESEQVIAEI+AG YTLNFKERVRKHIYSDSEGEMHWSTDVYHAPEF YSNV L
Sbjct: 412 VQNDQYVESEQVIAEIRAGTYTLNFKERVRKHIYSDSEGEMHWSTDVYHAPEFQYSNVRL 471
Query: 542 LPKTSHLWILSGGSCRSSVVSFSLYKDQDQMNIHSLSVERREISSLSLSVNNDQARHKLF 721
LPKTSHLWILSGGSCRS VVSFSL+KDQDQ+N+HS SVERR ISSLS VNNDQ RH+L
Sbjct: 472 LPKTSHLWILSGGSCRSGVVSFSLHKDQDQLNVHSHSVERRYISSLS--VNNDQVRHQLV 529
Query: 722 SSAFSAKKEGGILEMSDYSGFNRIIGTGHCNLIHPAILRANSNLLAKRQRNRFLIPFHSI 901
S FS KKE I DYSGFNRIIG GHCNLIHPAIL NS+LLAKR+RN+F IPF SI
Sbjct: 530 RSDFSDKKEDDIF---DYSGFNRIIGIGHCNLIHPAILHKNSDLLAKRRRNQFCIPFQSI 586
Query: 902 QEQEKELMPHXXXXXXXXXXXXFRRNSILAYFDDPRYRRKSSGITKYGTLGAHSIVKKED 1081
QEQEKELMPH FR+NSILAYFDDPRYRRK+SGITKYGT+GAHSIVKKE
Sbjct: 587 QEQEKELMPHSGISIEIPIKGIFRKNSILAYFDDPRYRRKNSGITKYGTVGAHSIVKKEG 646
Query: 1082 LIEYRGLKKIKPKYQIKIDRLFFIPEEVHFFPESSYLMVRNNSIIGVDTRITLNIRSRVG 1261
LIEYRG+KKIKPK+Q+KIDR FFIPEEVH PESSY+MVRNNSIIGVDTRI LN RS+VG
Sbjct: 647 LIEYRGVKKIKPKFQMKIDRFFFIPEEVHILPESSYVMVRNNSIIGVDTRIALNRRSQVG 706
Query: 1262 GLVRIERKKGGIELKIFSGDIHFPGEIDKISRHSGILIPPXXXXXXXXXXXXXXXXXXXW 1441
GLVR+E+KK IEL+IFSGDIHFPGE DKISRHSGILIPP W
Sbjct: 707 GLVRVEKKKKKIELQIFSGDIHFPGETDKISRHSGILIPPETGKKELKESTRESKKLKKW 766
Query: 1442 IYVQRITPTKKKYFVLVRPVVTYEIADGINLATLFPQDPLREKDNMQFRVVNYVLYGKGK 1621
IYVQRITPTKKK+FVLVRPVVTYEIA+GINLATLFPQD LREKDNM RVVNY+LYG+GK
Sbjct: 767 IYVQRITPTKKKHFVLVRPVVTYEIANGINLATLFPQDLLREKDNMHLRVVNYILYGRGK 826
Query: 1622 AARGIPDTSIQLVRTCLVLNWDQDKKSSSVEEVCASFVEVRTNGLIRDFLRLNLVKSQIS 1801
RGI DTSIQLVRTCLVLNWDQDKKSSSVEEVCASFVEV TNG+ RDFLR++LV+S I
Sbjct: 827 PFRGISDTSIQLVRTCLVLNWDQDKKSSSVEEVCASFVEVSTNGMTRDFLRIDLVQSHIL 886
Query: 1802 YIRKRNHPSGSGLISDNGSVRTNSNPFYSVFGKAGVEQSLSQNQGTIRTLLNRNKECQSL 1981
YIRKRN PS GLISDNG RTN NPFYS++ KA V+QSL QNQGTI TLLNRNKECQSL
Sbjct: 887 YIRKRNAPSSPGLISDNGPDRTNRNPFYSIYFKARVQQSLRQNQGTIHTLLNRNKECQSL 946
Query: 1982 IILSSSNYFRMGPLTDVKYHNVIKQSIPIQKGSLTPIRNSLGPLGTALQIENFYSFYYLI 2161
IILSSSN FRMGP D+KYHNVIKQSI IQK L PIRNSLGPLGT LQI NFYSFYYLI
Sbjct: 947 IILSSSNCFRMGPFNDIKYHNVIKQSIHIQKDPLIPIRNSLGPLGTVLQIANFYSFYYLI 1006
Query: 2162 TLITHNHLSVTKYLKLDNLKQPCQVLKYYLMDENGEISNPDTDSKIILNPFNLNWYFLHH 2341
+N +SVT YLKLDNLKQ QV K+YLMDEN I NPD DSKI+LNPFNLNWYF+HH
Sbjct: 1007 P---YNPISVTNYLKLDNLKQTFQVRKFYLMDENERIYNPDPDSKIVLNPFNLNWYFIHH 1063
Query: 2342 NYCEEMSPIISLGQFLCENVCITKNGPHLKSGQVLIVQVNSVVIRSAKPYLATPGATVHG 2521
NYCEEMS I+SLGQF+CEN+CI NGPHLKSGQVLIVQ SVVIRSAKPYLATPGATVHG
Sbjct: 1064 NYCEEMSTIMSLGQFICENICIATNGPHLKSGQVLIVQAGSVVIRSAKPYLATPGATVHG 1123
Query: 2522 HYGEILYEGDTLVTFIYEKSRSGDITQGLPKVEQVLEVRSLDSISMNLEKRVEGWNARIT 2701
HYGEILYEGDTL+TFIYEKSRSGDITQGLPKVEQVLEVRS+DSISMNLEKRVEGWNARIT
Sbjct: 1124 HYGEILYEGDTLITFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMNLEKRVEGWNARIT 1183
Query: 2702 RILGIPWGFLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQITSKVLVSEA 2881
RILGIPWGFLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQITSKVLVSE
Sbjct: 1184 RILGIPWGFLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQITSKVLVSED 1243
Query: 2882 GMSNIFLPGELIGLLRAERTGRALEEVICYRAILLGITRASLNTQSFISEASFQETTRVL 3061
GMSNIFLPGELIGLLRAERTGRALEE ICYRAILLGITRASLNTQSFISEASFQET RVL
Sbjct: 1244 GMSNIFLPGELIGLLRAERTGRALEEAICYRAILLGITRASLNTQSFISEASFQETARVL 1303
Query: 3062 AKAALRGRIDWLKGLKENVVLGGIIPVGTGFKGLVHCSRQHNTILLERQKGNLFGGEMRD 3241
AKAALRGRIDWLKGLKENVVLGG+IPVGTGFK LVHCSRQHN ILL+ +K NLFGG M D
Sbjct: 1304 AKAALRGRIDWLKGLKENVVLGGMIPVGTGFKALVHCSRQHNNILLKTKKKNLFGGGMID 1363
Query: 3242 IFLHHRELFDSCISTTFHDTSEQLLRGFNES 3334
IFLHHREL D CIS T HDT EQ RGFNES
Sbjct: 1364 IFLHHRELLDFCISKTLHDTLEQSFRGFNES 1394
>YP_009231149.1 DNA-directed RNA polymerase beta'' chain (chloroplast) [Dipteronia
sinensis] ALV83907.1 DNA-directed RNA polymerase beta''
chain (chloroplast) [Dipteronia sinensis]
Length = 1395
Score = 1819 bits (4712), Expect = 0.0
Identities = 928/1112 (83%), Positives = 971/1112 (87%), Gaps = 1/1112 (0%)
Frame = +2
Query: 2 PFTCRSTSWICRLCYGRSPTHGDLVELGEAVGIISGQSIGEPGTQLTLRXXXXXXXXXXX 181
PFTCRSTSWICRLCYGRSPTHGDLVELGEAVGIISGQSIGEPGTQLTLR
Sbjct: 292 PFTCRSTSWICRLCYGRSPTHGDLVELGEAVGIISGQSIGEPGTQLTLRTFHTGGVFTGG 351
Query: 182 XAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCSIDLDVIIESEDIMHNVTIPPKSFLL 361
AEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLC IDL VIIESEDIMH V IPPKSFLL
Sbjct: 352 IAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCDIDLYVIIESEDIMHKVIIPPKSFLL 411
Query: 362 VQNDQYVESEQVIAEIQAGAYTLNFKERVRKHIYSDSEGEMHWSTDVYHAPEFTYSNVHL 541
VQNDQYVESEQVIAEI+AG YTLNFKERVRKHIYSDSEGEMHWST+VYHAPEF YSNV L
Sbjct: 412 VQNDQYVESEQVIAEIRAGTYTLNFKERVRKHIYSDSEGEMHWSTNVYHAPEFQYSNVRL 471
Query: 542 LPKTSHLWILSGGSCRSSVVSFSLYKDQDQMNIHSLSVERREISSLSLSVNNDQARHKLF 721
LPKTSHLWILSGGSC S VVSFSL+KDQDQ+NIHS SVERR ISSLS VNNDQ RH+L
Sbjct: 472 LPKTSHLWILSGGSCGSGVVSFSLHKDQDQLNIHSHSVERRYISSLS--VNNDQVRHQLV 529
Query: 722 SSAFSAKKEGGILEMSDYSGFNRIIGTGHCNLIHPAILRANSNLLAKRQRNRFLIPFHSI 901
S FS KKE GIL DYSGFNRI G GHCNLIHPAIL NS+LLAKR++N+FLIPF SI
Sbjct: 530 RSDFSDKKEDGIL---DYSGFNRITGIGHCNLIHPAILHKNSDLLAKRRKNQFLIPFQSI 586
Query: 902 QEQEKELMPHXXXXXXXXXXXXFRRNSILAYFDDPRYRRKSSGITKYGTLGAHSIVKKED 1081
QEQ+KELMPH FR+NSILAYFDDPRYRRK+SGITKYGT+GAHSIVKKED
Sbjct: 587 QEQDKELMPHSGISIEIPIKGIFRKNSILAYFDDPRYRRKNSGITKYGTIGAHSIVKKED 646
Query: 1082 LIEYRGLKKIKPKYQIKIDRLFFIPEEVHFFPESSYLMVRNNSIIGVDTRITLNIRSRVG 1261
LIEYRG+KKIKPK+Q+KIDR FFIPEEVH PESSY+MVRNNSIIGVDTRI LN RS+VG
Sbjct: 647 LIEYRGVKKIKPKFQMKIDRFFFIPEEVHILPESSYVMVRNNSIIGVDTRIALNRRSQVG 706
Query: 1262 GLVRIERKKGGIELKIFSGDIHFPGEIDKISRHSGILIPPXXXXXXXXXXXXXXXXXXXW 1441
GLVR+E+KK GIELKIFSGDIHFPGE DKISRHSGILIPP W
Sbjct: 707 GLVRVEKKKKGIELKIFSGDIHFPGETDKISRHSGILIPPETGKKELKESTGESKKLKKW 766
Query: 1442 IYVQRITPTKKKYFVLVRPVVTYEIADGINLATLFPQDPLREKDNMQFRVVNYVLYGKGK 1621
IYVQRIT TKKK+FVLVRPVVTYEIA+GINLATLFPQD LREKDNM RVVNY+LYGKGK
Sbjct: 767 IYVQRITSTKKKHFVLVRPVVTYEIANGINLATLFPQDLLREKDNMHLRVVNYILYGKGK 826
Query: 1622 AARGIPDTSIQLVRTCLVLNWDQDKKSSSVEEVCASFVEVRTNGLIRDFLRLNLVKSQIS 1801
RGI DTSIQLVRTCLVLNWDQDKKSSSVEEVCASFVEV TNG+IRDFLR+NLV+S IS
Sbjct: 827 PFRGISDTSIQLVRTCLVLNWDQDKKSSSVEEVCASFVEVSTNGMIRDFLRINLVQSHIS 886
Query: 1802 YIRKRNHPSGSGLISDNGSVRTNSNPFYSVFGKAGVEQSLSQNQGTIRTLLNRNKECQSL 1981
YIRKRN S SGLISDNG RTN NPFY ++ KA V QSL QNQGTI TLLNRNKECQSL
Sbjct: 887 YIRKRNATSSSGLISDNGPDRTNINPFYPIYFKARVHQSLIQNQGTIHTLLNRNKECQSL 946
Query: 1982 IILSSSNYFRMGPLTDVKYHNVIKQSIPIQKGSLTPIRNSLGPLGTALQIENFYSFYYLI 2161
IILSSSN FRMGP D+KYHNVIKQSI IQK L PIRNSLGPLGT LQI +FYSFYYLI
Sbjct: 947 IILSSSNCFRMGPFNDIKYHNVIKQSIHIQKDPLIPIRNSLGPLGTVLQIAHFYSFYYLI 1006
Query: 2162 TLITHNHLSVTKYLKLDNLKQPCQVLKYYLMDENGEISNPDTDSKIILNPFNLNWYFLHH 2341
T +N +SVT YLKLDNLKQ QV K+YLMDEN I NPD DSKI+LNPFNLNWYF+HH
Sbjct: 1007 T---YNPISVTNYLKLDNLKQTFQVRKFYLMDENERIYNPDPDSKIVLNPFNLNWYFIHH 1063
Query: 2342 NYCEEMSPIISLGQFLCENVCITKNGPHLKSGQVLIVQVNSVVIRSAKPYLATPGATVHG 2521
NYCEEMS I+SLGQF+CEN+CI NGPHLKSGQVLIVQ SVVIRSAKPYLATPGATVHG
Sbjct: 1064 NYCEEMSTIMSLGQFICENICIATNGPHLKSGQVLIVQAGSVVIRSAKPYLATPGATVHG 1123
Query: 2522 HYGEILYEGDTLVTFIYEKSRSGDITQGLPKVEQVLEVRSLDSISMNLEKRVEGWNARIT 2701
HYGEILYEGDTL+TFIYEKSRSGDITQGLPKVEQVLEVRS+DSISMNLEKRVEGWNARIT
Sbjct: 1124 HYGEILYEGDTLITFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMNLEKRVEGWNARIT 1183
Query: 2702 RILGIPWGFLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQITSKVLVSEA 2881
RILGIPWGFLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQITSKVLVSE
Sbjct: 1184 RILGIPWGFLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQITSKVLVSED 1243
Query: 2882 GMSNIFLPGELIGLLRAERTGRALEEVICYRAILLGITRASLNTQSFISEASFQETTRVL 3061
GMSN+FLPGELIGLLRAERTGRALEE ICYRAILLGITRASLNTQSFISEASFQET RVL
Sbjct: 1244 GMSNVFLPGELIGLLRAERTGRALEEAICYRAILLGITRASLNTQSFISEASFQETARVL 1303
Query: 3062 AKAALRGRIDWLKGLKENVVLGGIIPVGTGFKGLVHCSRQHNTILLERQKGNLFGGE-MR 3238
AKAALRGRIDWLKGLKENVVLGG+IPVGTGFK LVHCSRQHN ILLE +K GGE M
Sbjct: 1304 AKAALRGRIDWLKGLKENVVLGGMIPVGTGFKALVHCSRQHNDILLETKKTIYSGGEGMI 1363
Query: 3239 DIFLHHRELFDSCISTTFHDTSEQLLRGFNES 3334
DIFLHHRELFD CIS T HDTSEQ RGFNES
Sbjct: 1364 DIFLHHRELFDFCISKTLHDTSEQSFRGFNES 1395
>YP_009320356.1 DNA-directed RNA polymerase beta'' chain (chloroplast) [Dipteronia
dyeriana] AMA98227.1 DNA-directed RNA polymerase beta''
chain (chloroplast) [Dipteronia dyeriana]
Length = 1391
Score = 1818 bits (4709), Expect = 0.0
Identities = 928/1111 (83%), Positives = 974/1111 (87%)
Frame = +2
Query: 2 PFTCRSTSWICRLCYGRSPTHGDLVELGEAVGIISGQSIGEPGTQLTLRXXXXXXXXXXX 181
PFTCRSTSWICRLCYGRSPTHGDLVELGEAVGIISGQSIGEPGTQLTLR
Sbjct: 292 PFTCRSTSWICRLCYGRSPTHGDLVELGEAVGIISGQSIGEPGTQLTLRTFHTGGVFTGG 351
Query: 182 XAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCSIDLDVIIESEDIMHNVTIPPKSFLL 361
AEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLC IDL VIIESEDIMH VTIPPKSFLL
Sbjct: 352 IAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCDIDLYVIIESEDIMHKVTIPPKSFLL 411
Query: 362 VQNDQYVESEQVIAEIQAGAYTLNFKERVRKHIYSDSEGEMHWSTDVYHAPEFTYSNVHL 541
VQNDQYVESEQVIAEI+AG YTLNFKERVRKHIYSDSEGEMHWSTDVYHAPEF YSNV L
Sbjct: 412 VQNDQYVESEQVIAEIRAGTYTLNFKERVRKHIYSDSEGEMHWSTDVYHAPEFQYSNVRL 471
Query: 542 LPKTSHLWILSGGSCRSSVVSFSLYKDQDQMNIHSLSVERREISSLSLSVNNDQARHKLF 721
LPKTSHLWILSGGSC S VVSFSL+KDQDQ++IHS SVERR ISSLS VNNDQ RH+L
Sbjct: 472 LPKTSHLWILSGGSCGSGVVSFSLHKDQDQLSIHSHSVERRYISSLS--VNNDQVRHQLV 529
Query: 722 SSAFSAKKEGGILEMSDYSGFNRIIGTGHCNLIHPAILRANSNLLAKRQRNRFLIPFHSI 901
S FS KKE GIL DYSGFNRIIG GHCNLIHPAIL NS+LLAKR+RN+FLIPF SI
Sbjct: 530 RSDFSDKKEDGIL---DYSGFNRIIGIGHCNLIHPAILHKNSDLLAKRRRNQFLIPFQSI 586
Query: 902 QEQEKELMPHXXXXXXXXXXXXFRRNSILAYFDDPRYRRKSSGITKYGTLGAHSIVKKED 1081
QEQEKELMP+ FR+NSILAYFDDPRYRRK+SGITKYGT+GAHSIVKKED
Sbjct: 587 QEQEKELMPYSGISIEIPIKGIFRKNSILAYFDDPRYRRKNSGITKYGTIGAHSIVKKED 646
Query: 1082 LIEYRGLKKIKPKYQIKIDRLFFIPEEVHFFPESSYLMVRNNSIIGVDTRITLNIRSRVG 1261
LIEYRG+KKIKPK Q+KIDR FFIPEEVH PESSY+MVRNNSIIGVDTRI LN RS+VG
Sbjct: 647 LIEYRGVKKIKPKLQMKIDRFFFIPEEVHILPESSYVMVRNNSIIGVDTRIALNRRSQVG 706
Query: 1262 GLVRIERKKGGIELKIFSGDIHFPGEIDKISRHSGILIPPXXXXXXXXXXXXXXXXXXXW 1441
GLVR+E+KK IEL+IFSGDIHFPGE DKISRHSGILIPP W
Sbjct: 707 GLVRVEKKKKRIELQIFSGDIHFPGETDKISRHSGILIPPETGKKELKESTRESKKWKKW 766
Query: 1442 IYVQRITPTKKKYFVLVRPVVTYEIADGINLATLFPQDPLREKDNMQFRVVNYVLYGKGK 1621
IYVQRITPTKKK+FVLVRPV+TYEI++GINLATLFPQD LREKDNM RVVNY+LYGKGK
Sbjct: 767 IYVQRITPTKKKHFVLVRPVITYEISNGINLATLFPQDLLREKDNMHLRVVNYILYGKGK 826
Query: 1622 AARGIPDTSIQLVRTCLVLNWDQDKKSSSVEEVCASFVEVRTNGLIRDFLRLNLVKSQIS 1801
RGI DTSIQLVRTCLVLNWDQDKK SSVEEVCASFVEV TNG+IRDFLR++LV+S IS
Sbjct: 827 PFRGISDTSIQLVRTCLVLNWDQDKKGSSVEEVCASFVEVSTNGMIRDFLRIDLVQSHIS 886
Query: 1802 YIRKRNHPSGSGLISDNGSVRTNSNPFYSVFGKAGVEQSLSQNQGTIRTLLNRNKECQSL 1981
YIRKRN PS SGLISDNG RTN NPFYS++ KA V+QSLSQNQGTI TLLNRNKECQSL
Sbjct: 887 YIRKRNAPSSSGLISDNGPDRTNINPFYSIYFKARVQQSLSQNQGTIHTLLNRNKECQSL 946
Query: 1982 IILSSSNYFRMGPLTDVKYHNVIKQSIPIQKGSLTPIRNSLGPLGTALQIENFYSFYYLI 2161
IILSSSN FRMGP D+KYHNVIKQSI IQK L PIRNSLGPLGT LQI NFYSFY
Sbjct: 947 IILSSSNCFRMGPFNDIKYHNVIKQSIHIQKDPLIPIRNSLGPLGTVLQIANFYSFY--- 1003
Query: 2162 TLITHNHLSVTKYLKLDNLKQPCQVLKYYLMDENGEISNPDTDSKIILNPFNLNWYFLHH 2341
LIT+N +SVT YLKL NLKQ QV K+YLMDEN I NPD DSKI+LNPFNLNWYF+HH
Sbjct: 1004 CLITYNPISVTNYLKLYNLKQTFQVRKFYLMDENERIYNPDADSKIVLNPFNLNWYFIHH 1063
Query: 2342 NYCEEMSPIISLGQFLCENVCITKNGPHLKSGQVLIVQVNSVVIRSAKPYLATPGATVHG 2521
NYCEEMS I+SLGQF+CEN+CI NGPHLKSGQVLIVQ SVVIRSAKPYLATPGATVHG
Sbjct: 1064 NYCEEMSTIMSLGQFICENICIATNGPHLKSGQVLIVQAGSVVIRSAKPYLATPGATVHG 1123
Query: 2522 HYGEILYEGDTLVTFIYEKSRSGDITQGLPKVEQVLEVRSLDSISMNLEKRVEGWNARIT 2701
HYGEILYEGDTL+TFIYEKSRSGDITQGLPKVEQVLEVRS+DSISMNLEKRVEGWNARIT
Sbjct: 1124 HYGEILYEGDTLITFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMNLEKRVEGWNARIT 1183
Query: 2702 RILGIPWGFLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQITSKVLVSEA 2881
RILGIPWGFLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQITSKVLVSE
Sbjct: 1184 RILGIPWGFLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQITSKVLVSED 1243
Query: 2882 GMSNIFLPGELIGLLRAERTGRALEEVICYRAILLGITRASLNTQSFISEASFQETTRVL 3061
GMSN+FLPGELIGLLRAERTGRALEE ICYRAILLGITRASLNTQSFISEASFQET RVL
Sbjct: 1244 GMSNVFLPGELIGLLRAERTGRALEEAICYRAILLGITRASLNTQSFISEASFQETARVL 1303
Query: 3062 AKAALRGRIDWLKGLKENVVLGGIIPVGTGFKGLVHCSRQHNTILLERQKGNLFGGEMRD 3241
AKAALRGRIDWLKGLKENVVLGG+IPVGTGFK LVHCSRQHN ILLE++K NLFG M
Sbjct: 1304 AKAALRGRIDWLKGLKENVVLGGMIPVGTGFKALVHCSRQHNNILLEKKK-NLFGEGM-- 1360
Query: 3242 IFLHHRELFDSCISTTFHDTSEQLLRGFNES 3334
IFLHHRELFD CIS T HDTSEQ RGFNES
Sbjct: 1361 IFLHHRELFDFCISKTLHDTSEQSFRGFNES 1391