BLASTX nr result
ID: Phellodendron21_contig00001901
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Phellodendron21_contig00001901
(4274 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
YP_009166156.1 RpoA (chloroplast) [Zanthoxylum piperitum] YP_009... 605 0.0
YP_009269471.1 RpoA (chloroplast) [Zanthoxylum schinifolium] AMR... 603 0.0
YP_009333869.1 RNA polymerase alpha subunit (chloroplast) [Glyco... 595 0.0
YP_009334124.1 RNA polymerase alpha subunit (chloroplast) [Micro... 590 0.0
YP_009333698.1 RNA polymerase alpha subunit (chloroplast) [Murra... 590 0.0
YP_009334039.1 RNA polymerase alpha subunit (chloroplast) [Merri... 588 0.0
YP_009333954.1 RNA polymerase alpha subunit (chloroplast) [Glyco... 588 0.0
YP_740508.1 RNA polymerase alpha subunit (chloroplast) [Citrus s... 587 0.0
YP_009333783.1 RNA polymerase alpha subunit (chloroplast) [Claus... 585 0.0
YP_009234247.1 RNA polymerase alpha subunit (chloroplast) [Boswe... 575 0.0
YP_009262322.1 RNA polymerase alpha subunit (chloroplast) [Spond... 572 0.0
YP_009019920.1 RNA polymerase alpha subunit (chloroplast) [Azadi... 568 0.0
YP_009262236.1 RNA polymerase alpha subunit (chloroplast) [Spond... 567 0.0
YP_009257745.1 DNA-directed RNA polymerase alpha chain (chloropl... 567 0.0
YP_009232162.1 DNA-directed RNA polymerase alpha chain (chloropl... 563 0.0
YP_009231191.1 DNA-directed RNA polymerase alpha chain (chloropl... 562 0.0
YP_009344558.1 RpoA (chloroplast) [Rhus chinensis] APT69267.1 Rp... 562 0.0
YP_009320398.1 DNA-directed RNA polymerase alpha chain (chloropl... 562 0.0
YP_009257325.1 DNA-directed RNA polymerase alpha chain (chloropl... 561 0.0
YP_009259819.1 RNA polymerase alpha subunit (chloroplast) [Leitn... 558 0.0
>YP_009166156.1 RpoA (chloroplast) [Zanthoxylum piperitum] YP_009307157.1 RpoA
(chloroplast) [Zanthoxylum bungeanum] AKZ89353.1 RpoA
(chloroplast) [Zanthoxylum piperitum] AOR53582.1 RpoA
(chloroplast) [Zanthoxylum bungeanum]
Length = 328
Score = 605 bits (1560), Expect = 0.0
Identities = 304/328 (92%), Positives = 308/328 (93%)
Frame = -2
Query: 1714 MVREKVKVSTRALQWKCVESRADSKRLYYGRFILSPLMKGQADTIGIAMRRILLGEIEGT 1535
MVREKVKVSTR LQWKCVESRADSKRLYYGRFILSPLMKGQADTIGIAMRR+LLGEIEGT
Sbjct: 1 MVREKVKVSTRTLQWKCVESRADSKRLYYGRFILSPLMKGQADTIGIAMRRVLLGEIEGT 60
Query: 1534 CITRAKFEKIPHEYSTIVGIQESVHEILMNLKEIVLRSNLYGTCDALICVKGPGDVTAQD 1355
CITRAK EKIPHEYSTIVGIQESVHEILMNLKEIVLRSNLYGTCDALICVKG GDVTAQD
Sbjct: 61 CITRAKSEKIPHEYSTIVGIQESVHEILMNLKEIVLRSNLYGTCDALICVKGSGDVTAQD 120
Query: 1354 ILLPPSVEIVDKTQHIASLTEPIDLCIGLQIERSRGYNIKTPNNFQDGNCYPIDAAFMPV 1175
ILLPPSVEIVDKTQHIASLTEPIDLCIGLQIERSRGYNIKTPNNFQDGNCYPIDA FMPV
Sbjct: 121 ILLPPSVEIVDKTQHIASLTEPIDLCIGLQIERSRGYNIKTPNNFQDGNCYPIDAVFMPV 180
Query: 1174 RNANHSIQSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRSLIDLFIPFLQAADENLHL 995
RNANHSIQSYGNGNEKQEILFLEIWTNGSLTPKEALH+ASRSLIDLFIPFLQAADENLHL
Sbjct: 181 RNANHSIQSYGNGNEKQEILFLEIWTNGSLTPKEALHQASRSLIDLFIPFLQAADENLHL 240
Query: 994 ENNQYKVTLPFFTFHDRXXXXXXXXXXXXXKSIFIDQLELSPRIYNCLKKSNIHTLFELL 815
ENNQYKVTLPFFTFH R KSIFIDQ ELSPRIYNCLKKSNIHTLF+LL
Sbjct: 241 ENNQYKVTLPFFTFHHRLAKLTKKKKEITLKSIFIDQSELSPRIYNCLKKSNIHTLFDLL 300
Query: 814 NKSQEDLMKIEHFRLEDVKQIMGILENK 731
NKSQEDLMKIEHFRLEDVK+IMGILE K
Sbjct: 301 NKSQEDLMKIEHFRLEDVKRIMGILEKK 328
>YP_009269471.1 RpoA (chloroplast) [Zanthoxylum schinifolium] AMR00506.1 RpoA
(chloroplast) [Zanthoxylum schinifolium]
Length = 328
Score = 603 bits (1556), Expect = 0.0
Identities = 303/328 (92%), Positives = 306/328 (93%)
Frame = -2
Query: 1714 MVREKVKVSTRALQWKCVESRADSKRLYYGRFILSPLMKGQADTIGIAMRRILLGEIEGT 1535
MVREKVKVSTR LQWKCVESRADSKRLYYGRFILSPLMKGQADTIGIAMRR+LLGEIEGT
Sbjct: 1 MVREKVKVSTRTLQWKCVESRADSKRLYYGRFILSPLMKGQADTIGIAMRRVLLGEIEGT 60
Query: 1534 CITRAKFEKIPHEYSTIVGIQESVHEILMNLKEIVLRSNLYGTCDALICVKGPGDVTAQD 1355
CITRAK EKIPHEYSTIVGIQESVHEILMNLKEIVLRSNLYGTCD LICVKGPGDVTAQD
Sbjct: 61 CITRAKSEKIPHEYSTIVGIQESVHEILMNLKEIVLRSNLYGTCDTLICVKGPGDVTAQD 120
Query: 1354 ILLPPSVEIVDKTQHIASLTEPIDLCIGLQIERSRGYNIKTPNNFQDGNCYPIDAAFMPV 1175
ILLPPSVEIVDKTQHIASLTEPIDLCIGLQIERSRGYN KTPNNFQD NCYPIDA FMPV
Sbjct: 121 ILLPPSVEIVDKTQHIASLTEPIDLCIGLQIERSRGYNRKTPNNFQDRNCYPIDAVFMPV 180
Query: 1174 RNANHSIQSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRSLIDLFIPFLQAADENLHL 995
RNANHSIQSYGNGNEKQEILFLEIWTNGSLTPKEALH+ASRSLIDLFIPFLQAADEN HL
Sbjct: 181 RNANHSIQSYGNGNEKQEILFLEIWTNGSLTPKEALHQASRSLIDLFIPFLQAADENFHL 240
Query: 994 ENNQYKVTLPFFTFHDRXXXXXXXXXXXXXKSIFIDQLELSPRIYNCLKKSNIHTLFELL 815
ENNQYKVTLPFFTFHDR KSIFIDQ ELSPRIYNCLKKSNIHTLF+LL
Sbjct: 241 ENNQYKVTLPFFTFHDRLAKLTKKKKEIALKSIFIDQSELSPRIYNCLKKSNIHTLFDLL 300
Query: 814 NKSQEDLMKIEHFRLEDVKQIMGILENK 731
NKSQEDLMKIEHFRLEDVKQIMGILE K
Sbjct: 301 NKSQEDLMKIEHFRLEDVKQIMGILEKK 328
>YP_009333869.1 RNA polymerase alpha subunit (chloroplast) [Glycosmis mauritiana]
AOZ20822.1 RNA polymerase alpha subunit (chloroplast)
[Glycosmis mauritiana]
Length = 328
Score = 595 bits (1534), Expect = 0.0
Identities = 298/328 (90%), Positives = 305/328 (92%)
Frame = -2
Query: 1714 MVREKVKVSTRALQWKCVESRADSKRLYYGRFILSPLMKGQADTIGIAMRRILLGEIEGT 1535
MVREKVKVSTR LQWKCVESRADSKRLYYGRFILSPLMKGQADTIGIAMRR+LLGEIEGT
Sbjct: 1 MVREKVKVSTRTLQWKCVESRADSKRLYYGRFILSPLMKGQADTIGIAMRRVLLGEIEGT 60
Query: 1534 CITRAKFEKIPHEYSTIVGIQESVHEILMNLKEIVLRSNLYGTCDALICVKGPGDVTAQD 1355
CITRAK EKIPHEYSTIVGIQESVHEILMNLK+IVLRSNLYGTCDALICVKGPG VTAQD
Sbjct: 61 CITRAKSEKIPHEYSTIVGIQESVHEILMNLKDIVLRSNLYGTCDALICVKGPGYVTAQD 120
Query: 1354 ILLPPSVEIVDKTQHIASLTEPIDLCIGLQIERSRGYNIKTPNNFQDGNCYPIDAAFMPV 1175
ILLPPSVEIVD TQHIASLTEPIDL IGLQIERSRGYNIKTPN FQDGNCYPIDA FMPV
Sbjct: 121 ILLPPSVEIVDNTQHIASLTEPIDLSIGLQIERSRGYNIKTPNTFQDGNCYPIDAVFMPV 180
Query: 1174 RNANHSIQSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRSLIDLFIPFLQAADENLHL 995
RNANHSIQSYGNGNEK+EILFLEIWTNGSLTPKEALHEASRSLIDLFIPFLQ+ADENLHL
Sbjct: 181 RNANHSIQSYGNGNEKEEILFLEIWTNGSLTPKEALHEASRSLIDLFIPFLQSADENLHL 240
Query: 994 ENNQYKVTLPFFTFHDRXXXXXXXXXXXXXKSIFIDQLELSPRIYNCLKKSNIHTLFELL 815
ENNQYKVTLPFFTFHDR KSIFIDQ E+SPRIYNCLKKSNIHTLF+LL
Sbjct: 241 ENNQYKVTLPFFTFHDRLAKLTKKKKEIALKSIFIDQSEMSPRIYNCLKKSNIHTLFDLL 300
Query: 814 NKSQEDLMKIEHFRLEDVKQIMGILENK 731
NK QEDLMKIEHFR+EDVKQIMGILE K
Sbjct: 301 NKRQEDLMKIEHFRIEDVKQIMGILEKK 328
>YP_009334124.1 RNA polymerase alpha subunit (chloroplast) [Micromelum minutum]
AOZ21077.1 RNA polymerase alpha subunit (chloroplast)
[Micromelum minutum]
Length = 328
Score = 590 bits (1522), Expect = 0.0
Identities = 297/328 (90%), Positives = 303/328 (92%)
Frame = -2
Query: 1714 MVREKVKVSTRALQWKCVESRADSKRLYYGRFILSPLMKGQADTIGIAMRRILLGEIEGT 1535
MVREKVKVSTR LQWKCVESRADSKRLYYGRFILSPLMKGQADTIGIAMRR+LLGEIEGT
Sbjct: 1 MVREKVKVSTRTLQWKCVESRADSKRLYYGRFILSPLMKGQADTIGIAMRRVLLGEIEGT 60
Query: 1534 CITRAKFEKIPHEYSTIVGIQESVHEILMNLKEIVLRSNLYGTCDALICVKGPGDVTAQD 1355
CITRAK EKIPHEYSTIVGIQESVHEILMNLK+IVLRSNLYGTCDALICVKGPG VTAQD
Sbjct: 61 CITRAKSEKIPHEYSTIVGIQESVHEILMNLKDIVLRSNLYGTCDALICVKGPGYVTAQD 120
Query: 1354 ILLPPSVEIVDKTQHIASLTEPIDLCIGLQIERSRGYNIKTPNNFQDGNCYPIDAAFMPV 1175
ILLPPSVEIVD TQHIASLTEPIDL IGL+IERSRGYNIKTPN FQDGNCYPIDA FMPV
Sbjct: 121 ILLPPSVEIVDNTQHIASLTEPIDLSIGLKIERSRGYNIKTPNTFQDGNCYPIDAVFMPV 180
Query: 1174 RNANHSIQSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRSLIDLFIPFLQAADENLHL 995
RNANHSIQSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRSLIDLFIPFLQAADENLHL
Sbjct: 181 RNANHSIQSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRSLIDLFIPFLQAADENLHL 240
Query: 994 ENNQYKVTLPFFTFHDRXXXXXXXXXXXXXKSIFIDQLELSPRIYNCLKKSNIHTLFELL 815
ENNQYKVTLPF TFHD KSIFIDQ E+SPRIYNCLKKSNIHTLF+LL
Sbjct: 241 ENNQYKVTLPFLTFHDILANLTKKKKEIALKSIFIDQSEMSPRIYNCLKKSNIHTLFDLL 300
Query: 814 NKSQEDLMKIEHFRLEDVKQIMGILENK 731
NK QEDLMKIEHFR+EDVKQIMGILE K
Sbjct: 301 NKRQEDLMKIEHFRIEDVKQIMGILEKK 328
>YP_009333698.1 RNA polymerase alpha subunit (chloroplast) [Murraya koenigii]
AOZ20652.1 RNA polymerase alpha subunit (chloroplast)
[Murraya koenigii]
Length = 328
Score = 590 bits (1522), Expect = 0.0
Identities = 295/328 (89%), Positives = 305/328 (92%)
Frame = -2
Query: 1714 MVREKVKVSTRALQWKCVESRADSKRLYYGRFILSPLMKGQADTIGIAMRRILLGEIEGT 1535
MVREKVKVSTR LQWKCVES+ADSKRLYYGRFILSPLMKGQADTIGIAMRR+LLGEIEGT
Sbjct: 1 MVREKVKVSTRTLQWKCVESKADSKRLYYGRFILSPLMKGQADTIGIAMRRVLLGEIEGT 60
Query: 1534 CITRAKFEKIPHEYSTIVGIQESVHEILMNLKEIVLRSNLYGTCDALICVKGPGDVTAQD 1355
CITRAK EKIPHEYSTIVGIQESVHEILMNLK+IVLRSNLYGTCDALICVKGPG VTA+D
Sbjct: 61 CITRAKSEKIPHEYSTIVGIQESVHEILMNLKDIVLRSNLYGTCDALICVKGPGYVTARD 120
Query: 1354 ILLPPSVEIVDKTQHIASLTEPIDLCIGLQIERSRGYNIKTPNNFQDGNCYPIDAAFMPV 1175
ILLPPSVEIVDKTQHIASLTEPIDL IGLQIERSRGYNI+TPN FQDGNCYPIDA FMPV
Sbjct: 121 ILLPPSVEIVDKTQHIASLTEPIDLSIGLQIERSRGYNIQTPNTFQDGNCYPIDAVFMPV 180
Query: 1174 RNANHSIQSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRSLIDLFIPFLQAADENLHL 995
RNANHSIQSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRSLIDLFIPF+QAADEN+HL
Sbjct: 181 RNANHSIQSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRSLIDLFIPFIQAADENVHL 240
Query: 994 ENNQYKVTLPFFTFHDRXXXXXXXXXXXXXKSIFIDQLELSPRIYNCLKKSNIHTLFELL 815
ENNQYKVTLPFFTFHDR KSIFIDQ E+SP IYNCLKKSNIHTLF+LL
Sbjct: 241 ENNQYKVTLPFFTFHDRLSKLTKKKKEIALKSIFIDQSEMSPGIYNCLKKSNIHTLFDLL 300
Query: 814 NKSQEDLMKIEHFRLEDVKQIMGILENK 731
NK QEDLMKIEHFR+EDVKQIMGILE K
Sbjct: 301 NKRQEDLMKIEHFRIEDVKQIMGILEKK 328
>YP_009334039.1 RNA polymerase alpha subunit (chloroplast) [Merrillia caloxylon]
AOZ20992.1 RNA polymerase alpha subunit (chloroplast)
[Merrillia caloxylon]
Length = 328
Score = 588 bits (1516), Expect = 0.0
Identities = 297/328 (90%), Positives = 302/328 (92%)
Frame = -2
Query: 1714 MVREKVKVSTRALQWKCVESRADSKRLYYGRFILSPLMKGQADTIGIAMRRILLGEIEGT 1535
MVREKVKVSTR LQWKCVESRADSKRLYYGRFILSPLMKGQADTIGIAMRR+LLGEIEGT
Sbjct: 1 MVREKVKVSTRTLQWKCVESRADSKRLYYGRFILSPLMKGQADTIGIAMRRVLLGEIEGT 60
Query: 1534 CITRAKFEKIPHEYSTIVGIQESVHEILMNLKEIVLRSNLYGTCDALICVKGPGDVTAQD 1355
CITRAK EKIPHEYSTIVGIQESVHEILMNLK+IVLRSNLYGTCDALICVKGPG VTAQD
Sbjct: 61 CITRAKSEKIPHEYSTIVGIQESVHEILMNLKDIVLRSNLYGTCDALICVKGPGYVTAQD 120
Query: 1354 ILLPPSVEIVDKTQHIASLTEPIDLCIGLQIERSRGYNIKTPNNFQDGNCYPIDAAFMPV 1175
ILLPPSVEIVD TQHIASLTEPIDL I LQIERSRGYNIKTPN FQDGN YPIDA FMPV
Sbjct: 121 ILLPPSVEIVDNTQHIASLTEPIDLSIELQIERSRGYNIKTPNTFQDGNFYPIDAVFMPV 180
Query: 1174 RNANHSIQSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRSLIDLFIPFLQAADENLHL 995
RNANHSIQSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRSLIDLFIPFLQA DENLHL
Sbjct: 181 RNANHSIQSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRSLIDLFIPFLQAEDENLHL 240
Query: 994 ENNQYKVTLPFFTFHDRXXXXXXXXXXXXXKSIFIDQLELSPRIYNCLKKSNIHTLFELL 815
ENNQYKVTLPFFTFHDR KSIFIDQLE+SPRIYNCLKKSNIHTLF+LL
Sbjct: 241 ENNQYKVTLPFFTFHDRLAKLTKKKKEIALKSIFIDQLEMSPRIYNCLKKSNIHTLFDLL 300
Query: 814 NKSQEDLMKIEHFRLEDVKQIMGILENK 731
NK QEDLMKIEHFR+EDVKQIM ILE K
Sbjct: 301 NKRQEDLMKIEHFRIEDVKQIMSILEKK 328
>YP_009333954.1 RNA polymerase alpha subunit (chloroplast) [Glycosmis pentaphylla]
AOZ20907.1 RNA polymerase alpha subunit (chloroplast)
[Glycosmis pentaphylla]
Length = 328
Score = 588 bits (1516), Expect = 0.0
Identities = 295/328 (89%), Positives = 303/328 (92%)
Frame = -2
Query: 1714 MVREKVKVSTRALQWKCVESRADSKRLYYGRFILSPLMKGQADTIGIAMRRILLGEIEGT 1535
MVREKVKVSTR LQWKCVESRADSKRLYYGRFILSPLMKGQADTIGIAMRR+LLGEIEGT
Sbjct: 1 MVREKVKVSTRTLQWKCVESRADSKRLYYGRFILSPLMKGQADTIGIAMRRVLLGEIEGT 60
Query: 1534 CITRAKFEKIPHEYSTIVGIQESVHEILMNLKEIVLRSNLYGTCDALICVKGPGDVTAQD 1355
CITRAK EKIPHEYSTIVGIQESVHEILMNLK+IVLRSNLYGTCDA ICVKGPG VTAQD
Sbjct: 61 CITRAKSEKIPHEYSTIVGIQESVHEILMNLKDIVLRSNLYGTCDAFICVKGPGYVTAQD 120
Query: 1354 ILLPPSVEIVDKTQHIASLTEPIDLCIGLQIERSRGYNIKTPNNFQDGNCYPIDAAFMPV 1175
ILLPPSVEIVD TQHIASLTEPIDL IGLQIERSRGYNIKTPN FQDGN YPIDA FMPV
Sbjct: 121 ILLPPSVEIVDNTQHIASLTEPIDLSIGLQIERSRGYNIKTPNTFQDGNFYPIDAVFMPV 180
Query: 1174 RNANHSIQSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRSLIDLFIPFLQAADENLHL 995
RNANH+IQSYGNGNEK+EILFLEIWTNGSLTPKEALHEASRSLIDLFIPFLQ+ADENLHL
Sbjct: 181 RNANHNIQSYGNGNEKEEILFLEIWTNGSLTPKEALHEASRSLIDLFIPFLQSADENLHL 240
Query: 994 ENNQYKVTLPFFTFHDRXXXXXXXXXXXXXKSIFIDQLELSPRIYNCLKKSNIHTLFELL 815
ENNQYKVTLPFFTFHDR KSIFIDQ E+SPRIYNCLKKSNIHTLF+LL
Sbjct: 241 ENNQYKVTLPFFTFHDRLAKLTKKKKEIALKSIFIDQSEMSPRIYNCLKKSNIHTLFDLL 300
Query: 814 NKSQEDLMKIEHFRLEDVKQIMGILENK 731
NK QEDLMKIEHFR+EDVKQIMGILE K
Sbjct: 301 NKRQEDLMKIEHFRIEDVKQIMGILEKK 328
>YP_740508.1 RNA polymerase alpha subunit (chloroplast) [Citrus sinensis]
YP_009059381.1 RNA polymerase alpha subunit (chloroplast)
[Citrus aurantiifolia] YP_009253678.1 RNA polymerase
alpha subunit (chloroplast) [Citrus platymamma]
YP_009320129.1 RNA polymerase alpha subunit (chloroplast)
[Citrus depressa] Q09ME5.1 RecName: Full=DNA-directed RNA
polymerase subunit alpha; Short=PEP; AltName:
Full=Plastid-encoded RNA polymerase subunit alpha;
Short=RNA polymerase subunit alpha ABI49051.1 RNA
polymerase alpha subunit (chloroplast) [Citrus sinensis]
AIL50318.1 RNA polymerase alpha subunit (chloroplast)
[Citrus aurantiifolia] ALI86694.1 RNA polymerase alpha
subunit (chloroplast) [Citrus platymamma] BAV89973.1 RNA
polymerase alpha subunit (chloroplast) [Citrus depressa]
Length = 328
Score = 587 bits (1513), Expect = 0.0
Identities = 296/328 (90%), Positives = 301/328 (91%)
Frame = -2
Query: 1714 MVREKVKVSTRALQWKCVESRADSKRLYYGRFILSPLMKGQADTIGIAMRRILLGEIEGT 1535
MVREKVKVSTR LQWKCVESRADSKRLYYGRFILSPLMKGQADTIGIAMRR+LLGEIEGT
Sbjct: 1 MVREKVKVSTRTLQWKCVESRADSKRLYYGRFILSPLMKGQADTIGIAMRRVLLGEIEGT 60
Query: 1534 CITRAKFEKIPHEYSTIVGIQESVHEILMNLKEIVLRSNLYGTCDALICVKGPGDVTAQD 1355
CITRAK EKIPHEYSTIVGIQESVHEILMNLK+IVLRSNLYGTCDALICVKGPG VTAQD
Sbjct: 61 CITRAKSEKIPHEYSTIVGIQESVHEILMNLKDIVLRSNLYGTCDALICVKGPGYVTAQD 120
Query: 1354 ILLPPSVEIVDKTQHIASLTEPIDLCIGLQIERSRGYNIKTPNNFQDGNCYPIDAAFMPV 1175
ILLPPSVEIVD TQHIASLTEPIDL IGLQIERSRGYNIKTPN FQDGNCYPIDA FMPV
Sbjct: 121 ILLPPSVEIVDNTQHIASLTEPIDLSIGLQIERSRGYNIKTPNTFQDGNCYPIDAVFMPV 180
Query: 1174 RNANHSIQSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRSLIDLFIPFLQAADENLHL 995
RNANHSIQSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRSLIDLFIPFLQA DENL L
Sbjct: 181 RNANHSIQSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRSLIDLFIPFLQAEDENLPL 240
Query: 994 ENNQYKVTLPFFTFHDRXXXXXXXXXXXXXKSIFIDQLELSPRIYNCLKKSNIHTLFELL 815
ENNQYKVTLPFFTFHDR KSIFIDQ E+SPRIYNCLKKSNIHTLF+LL
Sbjct: 241 ENNQYKVTLPFFTFHDRLAKLTKKKKEIALKSIFIDQSEMSPRIYNCLKKSNIHTLFDLL 300
Query: 814 NKSQEDLMKIEHFRLEDVKQIMGILENK 731
N QEDLMKIEHFR+EDVKQIM ILE K
Sbjct: 301 NTRQEDLMKIEHFRIEDVKQIMSILEKK 328
>YP_009333783.1 RNA polymerase alpha subunit (chloroplast) [Clausena excavata]
AOZ20737.1 RNA polymerase alpha subunit (chloroplast)
[Clausena excavata]
Length = 328
Score = 585 bits (1509), Expect = 0.0
Identities = 295/328 (89%), Positives = 300/328 (91%)
Frame = -2
Query: 1714 MVREKVKVSTRALQWKCVESRADSKRLYYGRFILSPLMKGQADTIGIAMRRILLGEIEGT 1535
MVREKVKVSTR LQWKCVESR DSKRLYYGRFILSPLMKGQADTIGIAMRR+LLGEIEGT
Sbjct: 1 MVREKVKVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRVLLGEIEGT 60
Query: 1534 CITRAKFEKIPHEYSTIVGIQESVHEILMNLKEIVLRSNLYGTCDALICVKGPGDVTAQD 1355
CITRAK EKIPHEYSTIVGIQESVHEILMNLK+IVLRSNLYGTCDALICVKGPG VTAQD
Sbjct: 61 CITRAKSEKIPHEYSTIVGIQESVHEILMNLKDIVLRSNLYGTCDALICVKGPGYVTAQD 120
Query: 1354 ILLPPSVEIVDKTQHIASLTEPIDLCIGLQIERSRGYNIKTPNNFQDGNCYPIDAAFMPV 1175
ILLPPSVEIVD TQHIASLTEPIDL IGLQIER RGYNIKTPN FQDGNCYPIDA FMPV
Sbjct: 121 ILLPPSVEIVDNTQHIASLTEPIDLSIGLQIERRRGYNIKTPNTFQDGNCYPIDAVFMPV 180
Query: 1174 RNANHSIQSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRSLIDLFIPFLQAADENLHL 995
RNANHSIQSY NGNEKQEILFLEIWTNGSLTPKEALHEASRSLIDLFIPFLQAADENLHL
Sbjct: 181 RNANHSIQSYVNGNEKQEILFLEIWTNGSLTPKEALHEASRSLIDLFIPFLQAADENLHL 240
Query: 994 ENNQYKVTLPFFTFHDRXXXXXXXXXXXXXKSIFIDQLELSPRIYNCLKKSNIHTLFELL 815
ENNQYKVTLPFFTFHDR KSIFIDQ E+SPRIYNCLKKSNIHTLF+LL
Sbjct: 241 ENNQYKVTLPFFTFHDRLAKLTKNKKEIALKSIFIDQSEMSPRIYNCLKKSNIHTLFDLL 300
Query: 814 NKSQEDLMKIEHFRLEDVKQIMGILENK 731
N Q DLMKIEHFR+EDVKQIMGILE K
Sbjct: 301 NTRQGDLMKIEHFRIEDVKQIMGILEKK 328
>YP_009234247.1 RNA polymerase alpha subunit (chloroplast) [Boswellia sacra]
AMB65115.1 RNA polymerase alpha subunit (chloroplast)
[Boswellia sacra]
Length = 327
Score = 575 bits (1482), Expect = 0.0
Identities = 290/328 (88%), Positives = 298/328 (90%)
Frame = -2
Query: 1714 MVREKVKVSTRALQWKCVESRADSKRLYYGRFILSPLMKGQADTIGIAMRRILLGEIEGT 1535
MVREKVKVSTR LQWKCVESRADSKRLYYGRF+LSPLMKGQADTIGIAMRR LLGE EGT
Sbjct: 1 MVREKVKVSTRTLQWKCVESRADSKRLYYGRFVLSPLMKGQADTIGIAMRRALLGETEGT 60
Query: 1534 CITRAKFEKIPHEYSTIVGIQESVHEILMNLKEIVLRSNLYGTCDALICVKGPGDVTAQD 1355
CITRAK EKIPHEYSTIVGIQESVHEILMNLKEIVLRSNLYGT DA ICVKGPGDVTAQD
Sbjct: 61 CITRAKSEKIPHEYSTIVGIQESVHEILMNLKEIVLRSNLYGTRDAFICVKGPGDVTAQD 120
Query: 1354 ILLPPSVEIVDKTQHIASLTEPIDLCIGLQIERSRGYNIKTPNNFQDGNCYPIDAAFMPV 1175
ILLPPSVEIVD TQHIASLTEPID CIGLQIER+RGYNIKTPNNFQDG+ YPIDA FMPV
Sbjct: 121 ILLPPSVEIVDNTQHIASLTEPIDFCIGLQIERNRGYNIKTPNNFQDGS-YPIDAVFMPV 179
Query: 1174 RNANHSIQSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRSLIDLFIPFLQAADENLHL 995
RNANHSI SYGNGNEKQEILFLEIWTNGSLTPKEALHEASR+LIDLFIPFLQA +EN HL
Sbjct: 180 RNANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLQATEENFHL 239
Query: 994 ENNQYKVTLPFFTFHDRXXXXXXXXXXXXXKSIFIDQLELSPRIYNCLKKSNIHTLFELL 815
ENNQYKVTLPFFTFHDR KSIFIDQ ELSPRIYNCLKKSNIHTLF+LL
Sbjct: 240 ENNQYKVTLPFFTFHDRLAKLKKNKKEIALKSIFIDQSELSPRIYNCLKKSNIHTLFDLL 299
Query: 814 NKSQEDLMKIEHFRLEDVKQIMGILENK 731
SQEDLMKIEHFR+EDVKQI+GILE K
Sbjct: 300 TNSQEDLMKIEHFRIEDVKQILGILEKK 327
>YP_009262322.1 RNA polymerase alpha subunit (chloroplast) [Spondias tuberosa]
ANI86835.1 RNA polymerase alpha subunit (chloroplast)
[Spondias tuberosa]
Length = 327
Score = 572 bits (1473), Expect = 0.0
Identities = 288/328 (87%), Positives = 300/328 (91%)
Frame = -2
Query: 1714 MVREKVKVSTRALQWKCVESRADSKRLYYGRFILSPLMKGQADTIGIAMRRILLGEIEGT 1535
MVREKVKVSTR LQWKCVESRADSKRLYYGRF+LSPLMKGQADTIGIAMRR LLGE EGT
Sbjct: 1 MVREKVKVSTRTLQWKCVESRADSKRLYYGRFVLSPLMKGQADTIGIAMRRALLGETEGT 60
Query: 1534 CITRAKFEKIPHEYSTIVGIQESVHEILMNLKEIVLRSNLYGTCDALICVKGPGDVTAQD 1355
CITRAK EK+PHEYSTIVGIQESVHEILMNLKEIVLRSNLYGT DALICVKGPG VTA+D
Sbjct: 61 CITRAKSEKVPHEYSTIVGIQESVHEILMNLKEIVLRSNLYGTRDALICVKGPGYVTAKD 120
Query: 1354 ILLPPSVEIVDKTQHIASLTEPIDLCIGLQIERSRGYNIKTPNNFQDGNCYPIDAAFMPV 1175
ILLPPSVEIVD TQHIASLT+PID CIGLQIER+RGYNIKTPNNFQDG+ YPIDA FMPV
Sbjct: 121 ILLPPSVEIVDNTQHIASLTQPIDFCIGLQIERNRGYNIKTPNNFQDGS-YPIDAVFMPV 179
Query: 1174 RNANHSIQSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRSLIDLFIPFLQAADENLHL 995
RNANHSI SYGNGNEKQEILFLEIWTNGSLTPKEALHEASR+LIDLFIPFLQAA+ENLHL
Sbjct: 180 RNANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLQAAEENLHL 239
Query: 994 ENNQYKVTLPFFTFHDRXXXXXXXXXXXXXKSIFIDQLELSPRIYNCLKKSNIHTLFELL 815
E+NQYKVTLPFFTFHDR KSIFIDQ ELSPRIYNCLKKSNIHTLF+LL
Sbjct: 240 EHNQYKVTLPFFTFHDRLAKLKKKKKEIALKSIFIDQSELSPRIYNCLKKSNIHTLFDLL 299
Query: 814 NKSQEDLMKIEHFRLEDVKQIMGILENK 731
N SQEDLMKIEHFR+EDVK I+GILE K
Sbjct: 300 NNSQEDLMKIEHFRIEDVKHILGILEKK 327
>YP_009019920.1 RNA polymerase alpha subunit (chloroplast) [Azadirachta indica]
AHJ91350.1 RNA polymerase alpha subunit (chloroplast)
[Azadirachta indica]
Length = 325
Score = 568 bits (1464), Expect = 0.0
Identities = 290/328 (88%), Positives = 300/328 (91%)
Frame = -2
Query: 1714 MVREKVKVSTRALQWKCVESRADSKRLYYGRFILSPLMKGQADTIGIAMRRILLGEIEGT 1535
MVREKVKVSTR L WKCVESRADSKRLYYGRFILSPLMKGQADTIGIAMRR LLGEIEGT
Sbjct: 1 MVREKVKVSTRTLLWKCVESRADSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 1534 CITRAKFEKIPHEYSTIVGIQESVHEILMNLKEIVLRSNLYGTCDALICVKGPGDVTAQD 1355
CITRAK EKIPHEYST+VGIQESVHEILMNLKEIVLRSNLYGT DALICVKGPG VTAQD
Sbjct: 61 CITRAKSEKIPHEYSTVVGIQESVHEILMNLKEIVLRSNLYGTRDALICVKGPGYVTAQD 120
Query: 1354 ILLPPSVEIVDKTQHIASLTEPIDLCIGLQIERSRGYNIKTPNNFQDGNCYPIDAAFMPV 1175
ILLPPSV+IVD TQHIASLTEPIDLCIGLQIER+RGYNIKTPNNFQDG+ YPIDA FMPV
Sbjct: 121 ILLPPSVKIVDNTQHIASLTEPIDLCIGLQIERNRGYNIKTPNNFQDGS-YPIDAVFMPV 179
Query: 1174 RNANHSIQSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRSLIDLFIPFLQAADENLHL 995
RNANHSI SYGNGNEKQEILFLEIWTNGSLTPKEALHEASR+LIDLFIPFLQ A+EN HL
Sbjct: 180 RNANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLQVAEENFHL 239
Query: 994 ENNQYKVTLPFFTFHDRXXXXXXXXXXXXXKSIFIDQLELSPRIYNCLKKSNIHTLFELL 815
ENNQYKVTLPFFTFHDR KSIFIDQ ELSPRIYNCLKKSNIHTLF+LL
Sbjct: 240 ENNQYKVTLPFFTFHDR--LKKLKKKEIALKSIFIDQSELSPRIYNCLKKSNIHTLFDLL 297
Query: 814 NKSQEDLMKIEHFRLEDVKQIMGILENK 731
+KSQEDLM IEHFR+EDVKQI+GILE K
Sbjct: 298 HKSQEDLMNIEHFRIEDVKQIVGILEKK 325
>YP_009262236.1 RNA polymerase alpha subunit (chloroplast) [Spondias bahiensis]
ANI86749.1 RNA polymerase alpha subunit (chloroplast)
[Spondias bahiensis]
Length = 327
Score = 567 bits (1461), Expect = 0.0
Identities = 286/328 (87%), Positives = 299/328 (91%)
Frame = -2
Query: 1714 MVREKVKVSTRALQWKCVESRADSKRLYYGRFILSPLMKGQADTIGIAMRRILLGEIEGT 1535
MVREKVKVSTR LQWKCVESRADSKRLYYGRF+LSPLMKGQADTIGIAMRR LLGE EGT
Sbjct: 1 MVREKVKVSTRTLQWKCVESRADSKRLYYGRFVLSPLMKGQADTIGIAMRRALLGETEGT 60
Query: 1534 CITRAKFEKIPHEYSTIVGIQESVHEILMNLKEIVLRSNLYGTCDALICVKGPGDVTAQD 1355
CITRAK EK+PHEYSTIVGIQESVHEILMNLKEIVLRSNLYGT DALICVKGPG VTA+D
Sbjct: 61 CITRAKSEKVPHEYSTIVGIQESVHEILMNLKEIVLRSNLYGTRDALICVKGPGYVTAKD 120
Query: 1354 ILLPPSVEIVDKTQHIASLTEPIDLCIGLQIERSRGYNIKTPNNFQDGNCYPIDAAFMPV 1175
ILLPPSVEIVD TQHIASLT+PID CIGLQIER+RGYNIKTPNNFQDG+ PIDA FMPV
Sbjct: 121 ILLPPSVEIVDNTQHIASLTQPIDFCIGLQIERNRGYNIKTPNNFQDGSS-PIDAVFMPV 179
Query: 1174 RNANHSIQSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRSLIDLFIPFLQAADENLHL 995
RNANHSI SYGNGNEKQEILFLEIWTNGSLTPKEALHEASR+LIDLFIPFLQAA+ENLHL
Sbjct: 180 RNANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLQAAEENLHL 239
Query: 994 ENNQYKVTLPFFTFHDRXXXXXXXXXXXXXKSIFIDQLELSPRIYNCLKKSNIHTLFELL 815
++NQYKVTLPFFTFHDR KSIFIDQ ELSPRIYNCLKKSNIHTLF+LL
Sbjct: 240 KHNQYKVTLPFFTFHDRLAKLKKKKKEIALKSIFIDQSELSPRIYNCLKKSNIHTLFDLL 299
Query: 814 NKSQEDLMKIEHFRLEDVKQIMGILENK 731
N SQEDLMKIEHFR+EDVK I+GILE K
Sbjct: 300 NNSQEDLMKIEHFRIEDVKHILGILEKK 327
>YP_009257745.1 DNA-directed RNA polymerase alpha chain (chloroplast) [Acer
miaotaiense] AHF71494.1 DNA-directed RNA polymerase alpha
chain (chloroplast) [Acer buergerianum subsp. ningpoense]
ANH55523.1 DNA-directed RNA polymerase alpha chain
(chloroplast) [Acer miaotaiense]
Length = 327
Score = 567 bits (1461), Expect = 0.0
Identities = 286/328 (87%), Positives = 299/328 (91%)
Frame = -2
Query: 1714 MVREKVKVSTRALQWKCVESRADSKRLYYGRFILSPLMKGQADTIGIAMRRILLGEIEGT 1535
MVREK+KVSTR LQWKCVESRADSKRLYYGRFILSPLMKGQADTIGIAMRR LLGEIEGT
Sbjct: 1 MVREKLKVSTRTLQWKCVESRADSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 1534 CITRAKFEKIPHEYSTIVGIQESVHEILMNLKEIVLRSNLYGTCDALICVKGPGDVTAQD 1355
CITRAK EKIPHEYSTIVGIQESVHEILMNLKEIVLRSNLYGT DALICVKGPG VTAQD
Sbjct: 61 CITRAKSEKIPHEYSTIVGIQESVHEILMNLKEIVLRSNLYGTRDALICVKGPGYVTAQD 120
Query: 1354 ILLPPSVEIVDKTQHIASLTEPIDLCIGLQIERSRGYNIKTPNNFQDGNCYPIDAAFMPV 1175
ILLPPSVEIVD TQHIA+LTEP D CIGLQIER+RGYNIKTPNNFQDG+ YPIDA FMPV
Sbjct: 121 ILLPPSVEIVDNTQHIANLTEPTDFCIGLQIERNRGYNIKTPNNFQDGS-YPIDAIFMPV 179
Query: 1174 RNANHSIQSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRSLIDLFIPFLQAADENLHL 995
RNANHSI SYGNGNEKQEILFLEIWTNG LTPKEALHEASR+LIDLFIPFLQ+A+ENLHL
Sbjct: 180 RNANHSIHSYGNGNEKQEILFLEIWTNGGLTPKEALHEASRNLIDLFIPFLQSAEENLHL 239
Query: 994 ENNQYKVTLPFFTFHDRXXXXXXXXXXXXXKSIFIDQLELSPRIYNCLKKSNIHTLFELL 815
ENNQYKV+LP+ TFHDR KSIFIDQ ELSPRIYNCLKKSNIHTLF+LL
Sbjct: 240 ENNQYKVSLPYLTFHDRVAKLKKKKKEIAWKSIFIDQSELSPRIYNCLKKSNIHTLFDLL 299
Query: 814 NKSQEDLMKIEHFRLEDVKQIMGILENK 731
N SQEDLMKIEHFR+EDVK+I+GILE K
Sbjct: 300 NNSQEDLMKIEHFRIEDVKRILGILEKK 327
>YP_009232162.1 DNA-directed RNA polymerase alpha chain (chloroplast) [Acer
morrisonense] AMA20443.1 DNA-directed RNA polymerase
alpha chain (chloroplast) [Acer morrisonense]
Length = 327
Score = 563 bits (1452), Expect = 0.0
Identities = 286/328 (87%), Positives = 297/328 (90%)
Frame = -2
Query: 1714 MVREKVKVSTRALQWKCVESRADSKRLYYGRFILSPLMKGQADTIGIAMRRILLGEIEGT 1535
MVREK+KVSTR LQWKCVESRADSKRLYYGRFILSPLMKGQADTIGIAMRR LLGEIEGT
Sbjct: 1 MVREKLKVSTRTLQWKCVESRADSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 1534 CITRAKFEKIPHEYSTIVGIQESVHEILMNLKEIVLRSNLYGTCDALICVKGPGDVTAQD 1355
CITRAK EKIPHEYSTIVGIQESVHEILMNLKEIVLRSNLYGT DALICVKGPG VTAQD
Sbjct: 61 CITRAKSEKIPHEYSTIVGIQESVHEILMNLKEIVLRSNLYGTRDALICVKGPGYVTAQD 120
Query: 1354 ILLPPSVEIVDKTQHIASLTEPIDLCIGLQIERSRGYNIKTPNNFQDGNCYPIDAAFMPV 1175
ILLPPSVEIVD TQHIA+LTEP D CIGLQIER+RGYNIKTPNNFQDG+ YPIDA FMPV
Sbjct: 121 ILLPPSVEIVDNTQHIANLTEPTDFCIGLQIERNRGYNIKTPNNFQDGS-YPIDAIFMPV 179
Query: 1174 RNANHSIQSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRSLIDLFIPFLQAADENLHL 995
RNANHSI SYGNGNEKQEILFLEIWTNG LTPKEALHEASR+LIDLFIPFLQ+A+ENLHL
Sbjct: 180 RNANHSIHSYGNGNEKQEILFLEIWTNGGLTPKEALHEASRNLIDLFIPFLQSAEENLHL 239
Query: 994 ENNQYKVTLPFFTFHDRXXXXXXXXXXXXXKSIFIDQLELSPRIYNCLKKSNIHTLFELL 815
ENNQYK +LP TFHDR KSIFIDQ ELSPRIYNCLKKSNIHTLF+LL
Sbjct: 240 ENNQYKGSLPDLTFHDRVAKLKKKKKEIAWKSIFIDQSELSPRIYNCLKKSNIHTLFDLL 299
Query: 814 NKSQEDLMKIEHFRLEDVKQIMGILENK 731
N SQEDLMKIEHFR+EDVKQI+GILE K
Sbjct: 300 NNSQEDLMKIEHFRIEDVKQILGILEKK 327
>YP_009231191.1 DNA-directed RNA polymerase alpha chain (chloroplast) [Dipteronia
sinensis] ALV83937.1 DNA-directed RNA polymerase alpha
chain (chloroplast) [Dipteronia sinensis]
Length = 327
Score = 562 bits (1449), Expect = 0.0
Identities = 284/328 (86%), Positives = 297/328 (90%)
Frame = -2
Query: 1714 MVREKVKVSTRALQWKCVESRADSKRLYYGRFILSPLMKGQADTIGIAMRRILLGEIEGT 1535
MVREK+KVSTR LQWKCVESRADSKRLYYGRFILSPLMKGQADTIGIAMRR LLGEIEGT
Sbjct: 1 MVREKLKVSTRTLQWKCVESRADSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 1534 CITRAKFEKIPHEYSTIVGIQESVHEILMNLKEIVLRSNLYGTCDALICVKGPGDVTAQD 1355
CITRAK EKIPHEYSTIVGIQESVHEILMNLKEIVLRSNLYGT DALICVKGPG VTAQD
Sbjct: 61 CITRAKSEKIPHEYSTIVGIQESVHEILMNLKEIVLRSNLYGTRDALICVKGPGYVTAQD 120
Query: 1354 ILLPPSVEIVDKTQHIASLTEPIDLCIGLQIERSRGYNIKTPNNFQDGNCYPIDAAFMPV 1175
ILLPPSVEIVD TQHIA+LTEP D CIGLQIER+RGYNIKTPNNFQDG+ YPIDA FMPV
Sbjct: 121 ILLPPSVEIVDNTQHIANLTEPTDFCIGLQIERNRGYNIKTPNNFQDGS-YPIDAIFMPV 179
Query: 1174 RNANHSIQSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRSLIDLFIPFLQAADENLHL 995
RNANHSI SYGNGNEKQEILFLEIWTNG LTPKEALHEASR+LIDLFIPFLQ+A+ENLH
Sbjct: 180 RNANHSIHSYGNGNEKQEILFLEIWTNGGLTPKEALHEASRNLIDLFIPFLQSAEENLHF 239
Query: 994 ENNQYKVTLPFFTFHDRXXXXXXXXXXXXXKSIFIDQLELSPRIYNCLKKSNIHTLFELL 815
ENNQYKV+LP+ TFHDR KSIFIDQ ELSPRIYNCLKKSNI TLF+LL
Sbjct: 240 ENNQYKVSLPYLTFHDRVAKLKKKKKEIAWKSIFIDQSELSPRIYNCLKKSNIRTLFDLL 299
Query: 814 NKSQEDLMKIEHFRLEDVKQIMGILENK 731
N SQEDLMKIEHFR+EDVK+I+GILE K
Sbjct: 300 NNSQEDLMKIEHFRIEDVKRILGILEKK 327
>YP_009344558.1 RpoA (chloroplast) [Rhus chinensis] APT69267.1 RpoA (chloroplast)
[Rhus chinensis]
Length = 328
Score = 562 bits (1449), Expect = 0.0
Identities = 288/329 (87%), Positives = 298/329 (90%), Gaps = 1/329 (0%)
Frame = -2
Query: 1714 MVREKVKVSTRALQWKCVESRADSKRLYYGRFILSPLMKGQADTIGIAMRRILLGEIEGT 1535
M REKVKVSTR LQWKCVESRADSKRLYYGRF+LSPLMKGQADTIGIAMRR LLGE EGT
Sbjct: 1 MAREKVKVSTRTLQWKCVESRADSKRLYYGRFVLSPLMKGQADTIGIAMRRALLGETEGT 60
Query: 1534 CITRAKFEKIPHEYSTIVGIQESVHEILMNLKEIVLRSNLYGTCDALICVKGPGDVTAQD 1355
CITRAK EKIPHEYSTIVGIQESVHEILMNLKEIVLRSN+YGT DALICVKGPG VTAQD
Sbjct: 61 CITRAKSEKIPHEYSTIVGIQESVHEILMNLKEIVLRSNIYGTRDALICVKGPGYVTAQD 120
Query: 1354 ILLPPSVEIVDKTQHIASLTEPIDLCIGLQIERSRGYN-IKTPNNFQDGNCYPIDAAFMP 1178
ILLPPSVEIVD TQHIASLTEPIDLCIGLQIER++GYN IKTPNNFQDG+ YPIDA FMP
Sbjct: 121 ILLPPSVEIVDNTQHIASLTEPIDLCIGLQIERNQGYNNIKTPNNFQDGS-YPIDAVFMP 179
Query: 1177 VRNANHSIQSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRSLIDLFIPFLQAADENLH 998
VRNANHSI SYGNGNEKQEILFLEIWTNGSLTPKEALHEASR+LIDLFIPFLQAA+ENLH
Sbjct: 180 VRNANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLQAAEENLH 239
Query: 997 LENNQYKVTLPFFTFHDRXXXXXXXXXXXXXKSIFIDQLELSPRIYNCLKKSNIHTLFEL 818
LE NQYKVTLPFFTFHDR KSIFIDQ ELS RIYNCLKKSNIHTLF+L
Sbjct: 240 LEPNQYKVTLPFFTFHDRLGKLKKKKKEIALKSIFIDQSELSRRIYNCLKKSNIHTLFDL 299
Query: 817 LNKSQEDLMKIEHFRLEDVKQIMGILENK 731
LN SQEDLMKIEHFR+EDVKQI+ ILE K
Sbjct: 300 LNNSQEDLMKIEHFRIEDVKQILDILEKK 328
>YP_009320398.1 DNA-directed RNA polymerase alpha chain (chloroplast) [Dipteronia
dyeriana] AMA98257.1 DNA-directed RNA polymerase alpha
chain (chloroplast) [Dipteronia dyeriana]
Length = 327
Score = 562 bits (1448), Expect = 0.0
Identities = 283/328 (86%), Positives = 298/328 (90%)
Frame = -2
Query: 1714 MVREKVKVSTRALQWKCVESRADSKRLYYGRFILSPLMKGQADTIGIAMRRILLGEIEGT 1535
MVR+K+KVSTR LQWKCVESRADSKRLYYGRFILSPLMKGQADTIGIAMRR LLGEIEGT
Sbjct: 1 MVRDKLKVSTRTLQWKCVESRADSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 1534 CITRAKFEKIPHEYSTIVGIQESVHEILMNLKEIVLRSNLYGTCDALICVKGPGDVTAQD 1355
CITRAK EKIPHEYSTIVGIQESVHEILMNLKEIVLRSNLYGT DALICVKGPG VTAQD
Sbjct: 61 CITRAKSEKIPHEYSTIVGIQESVHEILMNLKEIVLRSNLYGTRDALICVKGPGYVTAQD 120
Query: 1354 ILLPPSVEIVDKTQHIASLTEPIDLCIGLQIERSRGYNIKTPNNFQDGNCYPIDAAFMPV 1175
ILLPPSV+IVD TQHIA+LTEP D CIGLQIER+RGYNIKTPNNFQDG+ YPIDA FMPV
Sbjct: 121 ILLPPSVKIVDNTQHIANLTEPTDFCIGLQIERNRGYNIKTPNNFQDGS-YPIDAIFMPV 179
Query: 1174 RNANHSIQSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRSLIDLFIPFLQAADENLHL 995
RNANHSI SYGNGNEKQEILFLEIWTNG LTPKEALHEASR+LIDLFIPFLQ+A+ENLHL
Sbjct: 180 RNANHSIHSYGNGNEKQEILFLEIWTNGGLTPKEALHEASRNLIDLFIPFLQSAEENLHL 239
Query: 994 ENNQYKVTLPFFTFHDRXXXXXXXXXXXXXKSIFIDQLELSPRIYNCLKKSNIHTLFELL 815
ENNQYKV+LP+ TFHDR KSIFIDQ ELSPRIYNCLKKSNIHTL +LL
Sbjct: 240 ENNQYKVSLPYLTFHDRVAKLKKKKKEIAWKSIFIDQSELSPRIYNCLKKSNIHTLLDLL 299
Query: 814 NKSQEDLMKIEHFRLEDVKQIMGILENK 731
N SQEDLMKIEHFR+EDVK+I+GILE K
Sbjct: 300 NNSQEDLMKIEHFRIEDVKRILGILEKK 327
>YP_009257325.1 DNA-directed RNA polymerase alpha chain (chloroplast) [Acer davidii]
ANG44512.1 DNA-directed RNA polymerase alpha chain
(chloroplast) [Acer davidii]
Length = 327
Score = 561 bits (1445), Expect = 0.0
Identities = 284/328 (86%), Positives = 297/328 (90%)
Frame = -2
Query: 1714 MVREKVKVSTRALQWKCVESRADSKRLYYGRFILSPLMKGQADTIGIAMRRILLGEIEGT 1535
MVREK+KVSTR LQWKCVESRADSKRLYYGRFILSPLMKGQADTIGIAMRR LLGEIEGT
Sbjct: 1 MVREKLKVSTRTLQWKCVESRADSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 1534 CITRAKFEKIPHEYSTIVGIQESVHEILMNLKEIVLRSNLYGTCDALICVKGPGDVTAQD 1355
CITRAK EKIPHEYSTIVGIQESVHEILMNLKEIVLRSNLYGT DALICVKGPG VTAQD
Sbjct: 61 CITRAKSEKIPHEYSTIVGIQESVHEILMNLKEIVLRSNLYGTRDALICVKGPGYVTAQD 120
Query: 1354 ILLPPSVEIVDKTQHIASLTEPIDLCIGLQIERSRGYNIKTPNNFQDGNCYPIDAAFMPV 1175
ILLPPSVEIVD TQHIA+LTEP D CIGLQIER+RGYNIKTPNNFQDG+ YPIDA FMPV
Sbjct: 121 ILLPPSVEIVDNTQHIANLTEPTDFCIGLQIERNRGYNIKTPNNFQDGS-YPIDAIFMPV 179
Query: 1174 RNANHSIQSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRSLIDLFIPFLQAADENLHL 995
RNANHSI SYGNGNEKQEILFLEIWTNG LTPKEALHEASR+LIDLFIPFLQ+A+ENLHL
Sbjct: 180 RNANHSIHSYGNGNEKQEILFLEIWTNGGLTPKEALHEASRNLIDLFIPFLQSAEENLHL 239
Query: 994 ENNQYKVTLPFFTFHDRXXXXXXXXXXXXXKSIFIDQLELSPRIYNCLKKSNIHTLFELL 815
ENNQYK +L + TFH+R KSIFIDQ ELSPRIYNCLKKSNIHTLF+LL
Sbjct: 240 ENNQYKGSLTYLTFHNRVAKLKKKKKEIAWKSIFIDQSELSPRIYNCLKKSNIHTLFDLL 299
Query: 814 NKSQEDLMKIEHFRLEDVKQIMGILENK 731
N SQEDLMKIEHFR+EDVKQI+GILE K
Sbjct: 300 NNSQEDLMKIEHFRIEDVKQILGILEKK 327
>YP_009259819.1 RNA polymerase alpha subunit (chloroplast) [Leitneria floridana]
ANC29220.1 RNA polymerase alpha subunit (chloroplast)
[Leitneria floridana]
Length = 327
Score = 558 bits (1437), Expect = 0.0
Identities = 285/328 (86%), Positives = 296/328 (90%)
Frame = -2
Query: 1714 MVREKVKVSTRALQWKCVESRADSKRLYYGRFILSPLMKGQADTIGIAMRRILLGEIEGT 1535
MVREKVKVSTR LQWKCVESRADSKRLYYGRFILSPLMKGQADTIGIAMRR LLGEIEGT
Sbjct: 1 MVREKVKVSTRTLQWKCVESRADSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 1534 CITRAKFEKIPHEYSTIVGIQESVHEILMNLKEIVLRSNLYGTCDALICVKGPGDVTAQD 1355
IT AK EKIPHEYST+VGIQESVHEILMNLKEIVL+SNLYGT DALICVKGPG VTAQD
Sbjct: 61 SITCAKSEKIPHEYSTVVGIQESVHEILMNLKEIVLKSNLYGTRDALICVKGPGYVTAQD 120
Query: 1354 ILLPPSVEIVDKTQHIASLTEPIDLCIGLQIERSRGYNIKTPNNFQDGNCYPIDAAFMPV 1175
ILLPPSVEIVD TQHIASLTEPIDL IGL+IER+RGYNIKTPNNFQDGN YPIDA FMPV
Sbjct: 121 ILLPPSVEIVDNTQHIASLTEPIDLRIGLKIERNRGYNIKTPNNFQDGN-YPIDAVFMPV 179
Query: 1174 RNANHSIQSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRSLIDLFIPFLQAADENLHL 995
RNANHSI SYGNGNE QEILFLEIWTNGSLTPKEALHEASR+LI+LFIPFLQ +ENLH+
Sbjct: 180 RNANHSIHSYGNGNENQEILFLEIWTNGSLTPKEALHEASRNLINLFIPFLQKEEENLHV 239
Query: 994 ENNQYKVTLPFFTFHDRXXXXXXXXXXXXXKSIFIDQLELSPRIYNCLKKSNIHTLFELL 815
ENNQYKVTLPFFTFHDR KSIFIDQ ELSPRIYNCLKKSNIHTLF+LL
Sbjct: 240 ENNQYKVTLPFFTFHDRLDNLKKKKKEIALKSIFIDQSELSPRIYNCLKKSNIHTLFDLL 299
Query: 814 NKSQEDLMKIEHFRLEDVKQIMGILENK 731
NKS EDLMKIEHFR+EDVK I+GILE K
Sbjct: 300 NKSHEDLMKIEHFRIEDVKWIVGILEKK 327