BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Phellodendron21_contig00000458
         (1408 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_006450763.1 hypothetical protein CICLE_v10007968mg [Citrus cl...   561   0.0  
KDO79960.1 hypothetical protein CISIN_1g009449mg [Citrus sinensis]    561   0.0  
XP_006475980.1 PREDICTED: RNA polymerase sigma factor sigC [Citr...   560   0.0  
OAY54212.1 hypothetical protein MANES_03G057200 [Manihot esculenta]   462   e-156
OMO66884.1 RNA polymerase sigma-70 [Corchorus capsularis]             461   e-155
XP_017983625.1 PREDICTED: RNA polymerase sigma factor sigC [Theo...   457   e-154
OMO86642.1 RNA polymerase sigma-70 [Corchorus olitorius]              457   e-154
XP_002516489.1 PREDICTED: RNA polymerase sigma factor sigC [Rici...   449   e-150
EOY29838.1 RNApolymerase sigma-subunit C, putative [Theobroma ca...   458   e-150
ONI33722.1 hypothetical protein PRUPE_1G443200 [Prunus persica]       441   e-148
KDP34138.1 hypothetical protein JCGZ_07709 [Jatropha curcas]          443   e-148
XP_012077339.1 PREDICTED: RNA polymerase sigma factor sigC [Jatr...   443   e-147
ONI33721.1 hypothetical protein PRUPE_1G443200 [Prunus persica]       441   e-147
XP_007222923.1 hypothetical protein PRUPE_ppa003696mg [Prunus pe...   441   e-147
XP_018837562.1 PREDICTED: RNA polymerase sigma factor sigC-like ...   439   e-147
KJB65617.1 hypothetical protein B456_010G103500 [Gossypium raimo...   437   e-147
XP_018837561.1 PREDICTED: RNA polymerase sigma factor sigC-like ...   439   e-147
XP_010047303.1 PREDICTED: RNA polymerase sigma factor sigC [Euca...   438   e-146
XP_004291147.1 PREDICTED: RNA polymerase sigma factor sigC [Frag...   436   e-146
XP_012450465.1 PREDICTED: RNA polymerase sigma factor sigC-like ...   437   e-145

>XP_006450763.1 hypothetical protein CICLE_v10007968mg [Citrus clementina] ESR64003.1
            hypothetical protein CICLE_v10007968mg [Citrus
            clementina]
          Length = 534

 Score =  561 bits (1447), Expect = 0.0
 Identities = 282/328 (85%), Positives = 303/328 (92%)
 Frame = +2

Query: 2    SLLSLPSEALQEGLKQPAASSAKRALNSRSRRLMIARNEAEMSKGVQVVTNLERIRTTLE 181
            SLLSLPSEALQEGLKQP   S +RALNSR RRLMIARNEAEMSKGVQVV NLERI+TTLE
Sbjct: 204  SLLSLPSEALQEGLKQPTIFSPERALNSRGRRLMIARNEAEMSKGVQVVANLERIKTTLE 263

Query: 182  KESGQVASLNHWAEATGVTVKELKQHLAFGWSCKEELIKSTRPLVLFLARNYRGLGIPFS 361
            KESG+ ASLN WA+A GV+ + LKQHLAFGW C+EELIKSTRPLVLFLARNYRGLGIPFS
Sbjct: 264  KESGKAASLNCWAQAAGVSERVLKQHLAFGWYCREELIKSTRPLVLFLARNYRGLGIPFS 323

Query: 362  DLLQAGNVGVIQGAERFDHTRGYRFSTYVQYWIRKSISKMVERHARGIKIPSKVNSAINK 541
            DLLQAGNVGV+QGAERFDHTRGY+FSTYVQYWIRKSISKMV RHARGIKIP K+N  I+K
Sbjct: 324  DLLQAGNVGVLQGAERFDHTRGYKFSTYVQYWIRKSISKMVARHARGIKIPCKLNREISK 383

Query: 542  IQKARKALNNSRRKYPEDIEIAKYTGLSLAEIRSASECLRIVGSIDQKIRDCHKAKYMEF 721
            IQKARKAL NS  KYPEDIEIAKYTGLSLAEIRSASECLRIVGSIDQKI DC  AKY+EF
Sbjct: 384  IQKARKALTNSHGKYPEDIEIAKYTGLSLAEIRSASECLRIVGSIDQKIGDCLNAKYLEF 443

Query: 722  SPDMSIKSPKEIVMRQHMKKDIFHILENLDSRERQVLMLRYGLKDYRPKSLEEIGRLFHV 901
            +PD S+KSPKEIVMRQHMKKD+F ILE+LDSRERQVL+LRYGL D+RPKSLEEIG+LFHV
Sbjct: 444  APDRSVKSPKEIVMRQHMKKDVFRILESLDSRERQVLVLRYGLNDHRPKSLEEIGKLFHV 503

Query: 902  SKEWIRKLEKKAMTKLRDNETCRDLSHY 985
            SKEWIRKLEKKAMTKLRD+ETCRDLSH+
Sbjct: 504  SKEWIRKLEKKAMTKLRDSETCRDLSHF 531


>KDO79960.1 hypothetical protein CISIN_1g009449mg [Citrus sinensis]
          Length = 534

 Score =  561 bits (1446), Expect = 0.0
 Identities = 282/328 (85%), Positives = 303/328 (92%)
 Frame = +2

Query: 2    SLLSLPSEALQEGLKQPAASSAKRALNSRSRRLMIARNEAEMSKGVQVVTNLERIRTTLE 181
            SLLSLPSEALQEGLKQP   SA+RALNSR RRL IARNEAEMSKGVQVV NLERI+TTLE
Sbjct: 204  SLLSLPSEALQEGLKQPTIFSAERALNSRGRRLTIARNEAEMSKGVQVVANLERIKTTLE 263

Query: 182  KESGQVASLNHWAEATGVTVKELKQHLAFGWSCKEELIKSTRPLVLFLARNYRGLGIPFS 361
            KESG+ ASLN WA+A GV+ + LKQHLAFGW C+EELIKSTRPLVLFLARNYRGLGIPFS
Sbjct: 264  KESGKAASLNCWAQAAGVSERVLKQHLAFGWYCREELIKSTRPLVLFLARNYRGLGIPFS 323

Query: 362  DLLQAGNVGVIQGAERFDHTRGYRFSTYVQYWIRKSISKMVERHARGIKIPSKVNSAINK 541
            DLLQAGNVGV+QGAERFDHTRGY+FSTYVQYWIRKSISKMV RHARGIKIP K+N  I+K
Sbjct: 324  DLLQAGNVGVLQGAERFDHTRGYKFSTYVQYWIRKSISKMVARHARGIKIPCKLNREISK 383

Query: 542  IQKARKALNNSRRKYPEDIEIAKYTGLSLAEIRSASECLRIVGSIDQKIRDCHKAKYMEF 721
            IQKARKAL NS  KYPEDIEIAKYTGLSLAEIRSASECLRIVGSIDQKI DC  AKY+EF
Sbjct: 384  IQKARKALTNSHGKYPEDIEIAKYTGLSLAEIRSASECLRIVGSIDQKIGDCLNAKYLEF 443

Query: 722  SPDMSIKSPKEIVMRQHMKKDIFHILENLDSRERQVLMLRYGLKDYRPKSLEEIGRLFHV 901
            +PD S+KSPKEIVMRQHMKKD+F ILE+LDSRERQVL+LRYGL D+RPKSLEEIG+LFHV
Sbjct: 444  APDRSVKSPKEIVMRQHMKKDVFRILESLDSRERQVLVLRYGLNDHRPKSLEEIGKLFHV 503

Query: 902  SKEWIRKLEKKAMTKLRDNETCRDLSHY 985
            SKEWIRKLEKKAMTKLRD+ETCRDLSH+
Sbjct: 504  SKEWIRKLEKKAMTKLRDSETCRDLSHF 531


>XP_006475980.1 PREDICTED: RNA polymerase sigma factor sigC [Citrus sinensis]
          Length = 534

 Score =  560 bits (1443), Expect = 0.0
 Identities = 281/327 (85%), Positives = 302/327 (92%)
 Frame = +2

Query: 5    LLSLPSEALQEGLKQPAASSAKRALNSRSRRLMIARNEAEMSKGVQVVTNLERIRTTLEK 184
            LLSLPSEALQEGLKQP   SA+RALNSR RRLMIARNEAEMSKGVQVV NLERI+TTLEK
Sbjct: 205  LLSLPSEALQEGLKQPTIFSAERALNSRGRRLMIARNEAEMSKGVQVVANLERIKTTLEK 264

Query: 185  ESGQVASLNHWAEATGVTVKELKQHLAFGWSCKEELIKSTRPLVLFLARNYRGLGIPFSD 364
            ESG+ A LN WA+A GV+ + LKQHLAFGW C+EELIKSTRPLVLFLARNYRGLGIPFSD
Sbjct: 265  ESGKAARLNCWAQAAGVSERVLKQHLAFGWYCREELIKSTRPLVLFLARNYRGLGIPFSD 324

Query: 365  LLQAGNVGVIQGAERFDHTRGYRFSTYVQYWIRKSISKMVERHARGIKIPSKVNSAINKI 544
            LLQAGNVGV+QGAERFDHTRGY+FSTYVQYWIRKSISKMV RHARGIKIP K+N  I+KI
Sbjct: 325  LLQAGNVGVLQGAERFDHTRGYKFSTYVQYWIRKSISKMVARHARGIKIPCKLNREISKI 384

Query: 545  QKARKALNNSRRKYPEDIEIAKYTGLSLAEIRSASECLRIVGSIDQKIRDCHKAKYMEFS 724
            QKARKAL NS  KYPEDIEIAKYTGLSLAEIRSASECLRIVGSIDQKI DC  AKY+EF+
Sbjct: 385  QKARKALTNSHGKYPEDIEIAKYTGLSLAEIRSASECLRIVGSIDQKIGDCLNAKYLEFA 444

Query: 725  PDMSIKSPKEIVMRQHMKKDIFHILENLDSRERQVLMLRYGLKDYRPKSLEEIGRLFHVS 904
            PD S+KSPKEIVMRQHMKKD+F ILE+LDSRERQVL+LRYGL D+RPKSLEEIG+LFHVS
Sbjct: 445  PDRSVKSPKEIVMRQHMKKDVFRILESLDSRERQVLVLRYGLNDHRPKSLEEIGKLFHVS 504

Query: 905  KEWIRKLEKKAMTKLRDNETCRDLSHY 985
            KEWIRKLEKKAMTKLRD+ETCRDLSH+
Sbjct: 505  KEWIRKLEKKAMTKLRDSETCRDLSHF 531


>OAY54212.1 hypothetical protein MANES_03G057200 [Manihot esculenta]
          Length = 540

 Score =  462 bits (1189), Expect = e-156
 Identities = 225/326 (69%), Positives = 278/326 (85%)
 Frame = +2

Query: 8    LSLPSEALQEGLKQPAASSAKRALNSRSRRLMIARNEAEMSKGVQVVTNLERIRTTLEKE 187
            LSLPS+++Q G  +P  SSAK+A NS+SRRL+IARNEAEMS+GV++V  LE+IRTTLE+E
Sbjct: 212  LSLPSKSIQSGPGKPTYSSAKKASNSQSRRLVIARNEAEMSRGVKMVAELEKIRTTLEEE 271

Query: 188  SGQVASLNHWAEATGVTVKELKQHLAFGWSCKEELIKSTRPLVLFLARNYRGLGIPFSDL 367
            +G+V S + WAEA G+ +KEL+Q L FGW C++ELI+STRPLVL+ ARNYRG+GI   DL
Sbjct: 272  AGRVVSWSCWAEAAGLDMKELQQRLRFGWHCRDELIRSTRPLVLYFARNYRGMGIALEDL 331

Query: 368  LQAGNVGVIQGAERFDHTRGYRFSTYVQYWIRKSISKMVERHARGIKIPSKVNSAINKIQ 547
            LQAG VGV+QGAERFDHTRGYRFSTYVQYWIRKS+SK+V RHARGI+IP  ++ AIN+IQ
Sbjct: 332  LQAGTVGVLQGAERFDHTRGYRFSTYVQYWIRKSMSKIVTRHARGIQIPCTLSQAINQIQ 391

Query: 548  KARKALNNSRRKYPEDIEIAKYTGLSLAEIRSASECLRIVGSIDQKIRDCHKAKYMEFSP 727
            KARKALN    KY +D EIAK+TGLSLA+I SAS+CLR+VGSIDQK+ D   AKY+EF  
Sbjct: 392  KARKALNTRYGKYADDTEIAKFTGLSLAKIESASKCLRVVGSIDQKVGDSLNAKYLEFMS 451

Query: 728  DMSIKSPKEIVMRQHMKKDIFHILENLDSRERQVLMLRYGLKDYRPKSLEEIGRLFHVSK 907
            D SI+ P+E+VMRQHM KDI ++L  ++SRERQVL+LRYGLKDY+PKSLEEIG+LFHVSK
Sbjct: 452  DTSIQRPEEVVMRQHMIKDIHNLLRGMESRERQVLILRYGLKDYQPKSLEEIGKLFHVSK 511

Query: 908  EWIRKLEKKAMTKLRDNETCRDLSHY 985
            EW+R+LEKK +T+LR+ E CR+L HY
Sbjct: 512  EWVRRLEKKVITRLRNEEICRNLRHY 537


>OMO66884.1 RNA polymerase sigma-70 [Corchorus capsularis]
          Length = 555

 Score =  461 bits (1186), Expect = e-155
 Identities = 226/324 (69%), Positives = 276/324 (85%)
 Frame = +2

Query: 14   LPSEALQEGLKQPAASSAKRALNSRSRRLMIARNEAEMSKGVQVVTNLERIRTTLEKESG 193
            LP + L   LK P  SS KR  +SRSRRLMIARNEAEMSKG++VV NLERIRTTLE+E+G
Sbjct: 229  LPLKTLHGRLKMPNVSSGKRVSDSRSRRLMIARNEAEMSKGIKVVANLERIRTTLEEETG 288

Query: 194  QVASLNHWAEATGVTVKELKQHLAFGWSCKEELIKSTRPLVLFLARNYRGLGIPFSDLLQ 373
            +V SL+ WAEA GV  K L+Q L FGW C++EL++STR LVL+ ARNYRGLGI   DL+Q
Sbjct: 289  KVVSLSCWAEAAGVNEKVLQQQLQFGWYCRDELLRSTRSLVLYFARNYRGLGIAHEDLIQ 348

Query: 374  AGNVGVIQGAERFDHTRGYRFSTYVQYWIRKSISKMVERHARGIKIPSKVNSAINKIQKA 553
            AG+VGV+QGAERFDHTRGYRFSTYVQYWIRKSIS+MV RHARGI++P  ++ AI +IQKA
Sbjct: 349  AGSVGVLQGAERFDHTRGYRFSTYVQYWIRKSISRMVARHARGIQVPCMLSKAIVQIQKA 408

Query: 554  RKALNNSRRKYPEDIEIAKYTGLSLAEIRSASECLRIVGSIDQKIRDCHKAKYMEFSPDM 733
            +KAL+ S  K P++ EIAK+TGLSLA+IRSA++C+RIVGSIDQKI DC  AKY+EF PD+
Sbjct: 409  QKALSQSHGKNPDEDEIAKFTGLSLAKIRSANKCMRIVGSIDQKIGDCMNAKYLEFIPDL 468

Query: 734  SIKSPKEIVMRQHMKKDIFHILENLDSRERQVLMLRYGLKDYRPKSLEEIGRLFHVSKEW 913
            SI+SP++ VMRQHM+KDI+ +L  LD+RERQV++LR+GLK   P+SLEEIGRLFHVSKEW
Sbjct: 469  SIRSPEKTVMRQHMEKDIYDLLNGLDARERQVMVLRFGLKGSPPRSLEEIGRLFHVSKEW 528

Query: 914  IRKLEKKAMTKLRDNETCRDLSHY 985
            IR++E+KAMTK+RD ETCR+LSHY
Sbjct: 529  IRRIERKAMTKMRDTETCRNLSHY 552


>XP_017983625.1 PREDICTED: RNA polymerase sigma factor sigC [Theobroma cacao]
            XP_017983626.1 PREDICTED: RNA polymerase sigma factor
            sigC [Theobroma cacao]
          Length = 536

 Score =  457 bits (1176), Expect = e-154
 Identities = 223/324 (68%), Positives = 274/324 (84%)
 Frame = +2

Query: 14   LPSEALQEGLKQPAASSAKRALNSRSRRLMIARNEAEMSKGVQVVTNLERIRTTLEKESG 193
            LPS  L    ++P  SSAKR  +SRSRRL IARNEAEMSKGV+VV NLERIRTTLE+E+G
Sbjct: 210  LPSNTLHGRFQKPKVSSAKRVSDSRSRRLRIARNEAEMSKGVKVVANLERIRTTLEEETG 269

Query: 194  QVASLNHWAEATGVTVKELKQHLAFGWSCKEELIKSTRPLVLFLARNYRGLGIPFSDLLQ 373
            + ASL+ WAEA GV+ K L+QHL FGW C++EL++STR LVL+ ARNYRGLGI   DL+Q
Sbjct: 270  RAASLSCWAEAAGVSEKVLQQHLRFGWYCRDELLRSTRSLVLYFARNYRGLGIAHEDLIQ 329

Query: 374  AGNVGVIQGAERFDHTRGYRFSTYVQYWIRKSISKMVERHARGIKIPSKVNSAINKIQKA 553
            AG++GV+QGAERFDHTRGYRFSTYVQ+WIRKS+S++V RHARGI++P  ++ AI +IQKA
Sbjct: 330  AGSLGVLQGAERFDHTRGYRFSTYVQFWIRKSVSRIVTRHARGIQVPCTLSRAIVQIQKA 389

Query: 554  RKALNNSRRKYPEDIEIAKYTGLSLAEIRSASECLRIVGSIDQKIRDCHKAKYMEFSPDM 733
            RKAL+ S  KYP++  IAK+TGLSLA+IRSA++C+R+VGSIDQKI DC  AKY+EF PD+
Sbjct: 390  RKALSKSHGKYPDEDAIAKFTGLSLAKIRSANKCMRVVGSIDQKIGDCMNAKYLEFIPDL 449

Query: 734  SIKSPKEIVMRQHMKKDIFHILENLDSRERQVLMLRYGLKDYRPKSLEEIGRLFHVSKEW 913
            S++SP++ VMRQHMK+DI  +L  LD+RERQV++LRYGLK   PKSLEEIGRLFHVSKEW
Sbjct: 450  SVRSPEKTVMRQHMKEDIHDLLNGLDARERQVMVLRYGLKGSPPKSLEEIGRLFHVSKEW 509

Query: 914  IRKLEKKAMTKLRDNETCRDLSHY 985
            IR++E KAM  LRD ETCR+LSHY
Sbjct: 510  IRRIEMKAMKNLRDKETCRNLSHY 533


>OMO86642.1 RNA polymerase sigma-70 [Corchorus olitorius]
          Length = 555

 Score =  457 bits (1176), Expect = e-154
 Identities = 224/324 (69%), Positives = 274/324 (84%)
 Frame = +2

Query: 14   LPSEALQEGLKQPAASSAKRALNSRSRRLMIARNEAEMSKGVQVVTNLERIRTTLEKESG 193
            LP + L   LK P  SS KR  +SRSRRLMIARNEAEMS+G++VV NLERIRTTLE+E+G
Sbjct: 229  LPLKTLHGRLKMPNVSSGKRVSDSRSRRLMIARNEAEMSQGIKVVANLERIRTTLEEETG 288

Query: 194  QVASLNHWAEATGVTVKELKQHLAFGWSCKEELIKSTRPLVLFLARNYRGLGIPFSDLLQ 373
            +V SL+ WAEA GV  K L+Q L FGW C++EL++STR LVL+ ARNYRGLGI   DL+Q
Sbjct: 289  KVVSLSCWAEAAGVNEKVLQQQLHFGWYCRDELLRSTRSLVLYFARNYRGLGIAHEDLIQ 348

Query: 374  AGNVGVIQGAERFDHTRGYRFSTYVQYWIRKSISKMVERHARGIKIPSKVNSAINKIQKA 553
            AG++GV+QGAERFDHTRGYRFSTYVQYWIRKS+ +MV RHARGI++P  +N AI +IQKA
Sbjct: 349  AGSIGVLQGAERFDHTRGYRFSTYVQYWIRKSVLRMVARHARGIQVPCMLNKAIVQIQKA 408

Query: 554  RKALNNSRRKYPEDIEIAKYTGLSLAEIRSASECLRIVGSIDQKIRDCHKAKYMEFSPDM 733
            RKAL+ S  K P++ EIAK+TGLSLA+IRSA++C+RIVGSIDQKI DC  AKY+EF PD+
Sbjct: 409  RKALSQSHGKNPDEDEIAKFTGLSLAKIRSANKCMRIVGSIDQKIGDCMNAKYLEFIPDL 468

Query: 734  SIKSPKEIVMRQHMKKDIFHILENLDSRERQVLMLRYGLKDYRPKSLEEIGRLFHVSKEW 913
            SI+SP++ VMRQHM+KDI+ +L  LD+RERQV++LR+GLK   P+SLEEIGR+F VSKEW
Sbjct: 469  SIRSPEKTVMRQHMEKDIYDLLNGLDARERQVMVLRFGLKGSPPRSLEEIGRVFRVSKEW 528

Query: 914  IRKLEKKAMTKLRDNETCRDLSHY 985
            IR+LEKKAMTK+RD ETCR+LSHY
Sbjct: 529  IRRLEKKAMTKMRDTETCRNLSHY 552


>XP_002516489.1 PREDICTED: RNA polymerase sigma factor sigC [Ricinus communis]
            EEF45830.1 RNA polymerase sigma factor rpoD, putative
            [Ricinus communis]
          Length = 560

 Score =  449 bits (1155), Expect = e-150
 Identities = 219/326 (67%), Positives = 274/326 (84%)
 Frame = +2

Query: 8    LSLPSEALQEGLKQPAASSAKRALNSRSRRLMIARNEAEMSKGVQVVTNLERIRTTLEKE 187
            L LPS  +Q G ++P  SS K+A  S+SRRL+IARNEAEM++G++V+ +LE+IRTTLE+E
Sbjct: 232  LPLPSRPIQSGSEKPTVSSGKKASKSKSRRLIIARNEAEMARGIKVLADLEKIRTTLEEE 291

Query: 188  SGQVASLNHWAEATGVTVKELKQHLAFGWSCKEELIKSTRPLVLFLARNYRGLGIPFSDL 367
            + +V SL+ WAEA G+ VK L+Q L+FGW C++ELIKSTR LVL+ ARNYRG GI   DL
Sbjct: 292  TERVVSLSCWAEAAGLDVKVLQQQLSFGWYCRDELIKSTRSLVLYFARNYRGTGIALEDL 351

Query: 368  LQAGNVGVIQGAERFDHTRGYRFSTYVQYWIRKSISKMVERHARGIKIPSKVNSAINKIQ 547
            LQAGN+GV++GAERFDHTRGYRFSTYVQYWIRKS+SK+V R ARGI+IP  ++ AI +IQ
Sbjct: 352  LQAGNLGVLEGAERFDHTRGYRFSTYVQYWIRKSMSKIVSRLARGIQIPCTLSRAIYQIQ 411

Query: 548  KARKALNNSRRKYPEDIEIAKYTGLSLAEIRSASECLRIVGSIDQKIRDCHKAKYMEFSP 727
            KARKAL  S  KYP+D EIAKYTGLSLA+I SAS CLR+VGSIDQKI +   AKY+EF P
Sbjct: 412  KARKALTTSNGKYPDDDEIAKYTGLSLAKIESASRCLRVVGSIDQKIGESLNAKYLEFLP 471

Query: 728  DMSIKSPKEIVMRQHMKKDIFHILENLDSRERQVLMLRYGLKDYRPKSLEEIGRLFHVSK 907
            D S++SP+E+VMRQHM +D+ ++L +LDSRERQVL+LR+GL DY+PKSLEEIGR FHVSK
Sbjct: 472  DTSVQSPEEVVMRQHMIQDMHNLLRSLDSRERQVLILRFGLNDYQPKSLEEIGRHFHVSK 531

Query: 908  EWIRKLEKKAMTKLRDNETCRDLSHY 985
            EW+R+LEK+ MT+LR+ ETCR+L HY
Sbjct: 532  EWVRRLEKRVMTRLRNEETCRNLRHY 557


>EOY29838.1 RNApolymerase sigma-subunit C, putative [Theobroma cacao]
          Length = 848

 Score =  458 bits (1179), Expect = e-150
 Identities = 223/324 (68%), Positives = 275/324 (84%)
 Frame = +2

Query: 14   LPSEALQEGLKQPAASSAKRALNSRSRRLMIARNEAEMSKGVQVVTNLERIRTTLEKESG 193
            +PS  L    ++P  SSAKR  +SRSRRL IARNEAEMSKGV+VV NLERIRTTLE+E+G
Sbjct: 522  MPSNTLHGRFQKPKVSSAKRVSDSRSRRLRIARNEAEMSKGVKVVANLERIRTTLEEETG 581

Query: 194  QVASLNHWAEATGVTVKELKQHLAFGWSCKEELIKSTRPLVLFLARNYRGLGIPFSDLLQ 373
            + ASL+ WAEA GV+ K L+QHL FGW C++EL++STR LVL+ ARNYRGLGI   DL+Q
Sbjct: 582  RAASLSCWAEAAGVSEKVLQQHLRFGWYCRDELLRSTRSLVLYFARNYRGLGIAHEDLIQ 641

Query: 374  AGNVGVIQGAERFDHTRGYRFSTYVQYWIRKSISKMVERHARGIKIPSKVNSAINKIQKA 553
            AG++GV+QGAERFDHTRGYRFSTYVQ+WIRKS+S++V RHARGI++P  ++ AI +IQKA
Sbjct: 642  AGSLGVLQGAERFDHTRGYRFSTYVQFWIRKSVSRIVARHARGIQVPCTLSRAIVQIQKA 701

Query: 554  RKALNNSRRKYPEDIEIAKYTGLSLAEIRSASECLRIVGSIDQKIRDCHKAKYMEFSPDM 733
            RKAL+ S  KYP++  IAK+TGLSLA+IRSA++C+R+VGSIDQKI DC  AKY+EF PD+
Sbjct: 702  RKALSKSHGKYPDEDAIAKFTGLSLAKIRSANKCMRVVGSIDQKIGDCMNAKYLEFIPDL 761

Query: 734  SIKSPKEIVMRQHMKKDIFHILENLDSRERQVLMLRYGLKDYRPKSLEEIGRLFHVSKEW 913
            S++SP++ VMRQHMK+DI  +L  LD+RERQV++LRYGLK   PKSLEEIGRLFHVSKEW
Sbjct: 762  SVRSPEKTVMRQHMKEDIHDLLNGLDARERQVMVLRYGLKGSPPKSLEEIGRLFHVSKEW 821

Query: 914  IRKLEKKAMTKLRDNETCRDLSHY 985
            IR++E KAM KLRD ETCR+LSHY
Sbjct: 822  IRRIEMKAMKKLRDKETCRNLSHY 845


>ONI33722.1 hypothetical protein PRUPE_1G443200 [Prunus persica]
          Length = 474

 Score =  441 bits (1134), Expect = e-148
 Identities = 219/325 (67%), Positives = 268/325 (82%)
 Frame = +2

Query: 11   SLPSEALQEGLKQPAASSAKRALNSRSRRLMIARNEAEMSKGVQVVTNLERIRTTLEKES 190
            SLP + + +GLK+P  SS KRA N RSRRL I++NEAEMS GV+V+ +LERI+ TLEKE+
Sbjct: 147  SLPPKTIWKGLKKPTLSSGKRASNYRSRRLTISKNEAEMSIGVKVIADLERIKETLEKET 206

Query: 191  GQVASLNHWAEATGVTVKELKQHLAFGWSCKEELIKSTRPLVLFLARNYRGLGIPFSDLL 370
            G+VA+L  WAEA GV  K L QHL FGW C++ELI+STR LVL+LARNYRGLG+   DL+
Sbjct: 207  GKVATLRCWAEAAGVHEKVLLQHLRFGWYCQDELIRSTRSLVLYLARNYRGLGVALDDLM 266

Query: 371  QAGNVGVIQGAERFDHTRGYRFSTYVQYWIRKSISKMVERHARGIKIPSKVNSAINKIQK 550
            QAGN+G++QGAERFDH+RGYRFSTYVQYWIRKS+S++V +HARG++IP  ++ AIN+IQK
Sbjct: 267  QAGNLGLLQGAERFDHSRGYRFSTYVQYWIRKSMSRLVAQHARGVQIPFTLSKAINQIQK 326

Query: 551  ARKALNNSRRKYPEDIEIAKYTGLSLAEIRSASECLRIVGSIDQKIRDCHKAKYMEFSPD 730
            ARKA  NS  KYP+D EIAK TGLSLA IRSAS CLR+VGS+D K+ +     YMEF+PD
Sbjct: 327  ARKANYNSHMKYPDDEEIAKITGLSLARIRSASTCLRVVGSVDHKMWESSDGTYMEFTPD 386

Query: 731  MSIKSPKEIVMRQHMKKDIFHILENLDSRERQVLMLRYGLKDYRPKSLEEIGRLFHVSKE 910
             S+KSP+E VMRQHMKKDI  +L+ L+ RERQVL+LRYGL +Y PKSLEEIGRLFHVSKE
Sbjct: 387  TSLKSPEETVMRQHMKKDIHDLLKGLNLRERQVLVLRYGLNNYDPKSLEEIGRLFHVSKE 446

Query: 911  WIRKLEKKAMTKLRDNETCRDLSHY 985
            WIRK+EKKA+ KLR  E+ + LSHY
Sbjct: 447  WIRKIEKKALMKLRVEESHKYLSHY 471


>KDP34138.1 hypothetical protein JCGZ_07709 [Jatropha curcas]
          Length = 564

 Score =  443 bits (1139), Expect = e-148
 Identities = 218/324 (67%), Positives = 272/324 (83%)
 Frame = +2

Query: 14   LPSEALQEGLKQPAASSAKRALNSRSRRLMIARNEAEMSKGVQVVTNLERIRTTLEKESG 193
            LP +++Q G +  A S  K+  NS+SRRLMIARNEAEMS+GV+V+ NLE+IRTTLE+E+G
Sbjct: 239  LPLKSIQNG-RGKATSFDKKTSNSKSRRLMIARNEAEMSRGVKVLANLEKIRTTLEQETG 297

Query: 194  QVASLNHWAEATGVTVKELKQHLAFGWSCKEELIKSTRPLVLFLARNYRGLGIPFSDLLQ 373
            +  SL+ WAEA G+ +K L+Q L FGW C++EL++STR LVLFLARNYRG+GI   DLLQ
Sbjct: 298  RAVSLSCWAEAAGLDMKVLQQQLHFGWYCRDELVRSTRSLVLFLARNYRGMGIALEDLLQ 357

Query: 374  AGNVGVIQGAERFDHTRGYRFSTYVQYWIRKSISKMVERHARGIKIPSKVNSAINKIQKA 553
            AGN+GV+QGAERFD  RGYRFSTYVQYWIRKS+SK+V RHARGI+IP  ++ AIN+IQKA
Sbjct: 358  AGNMGVLQGAERFDDARGYRFSTYVQYWIRKSMSKIVSRHARGIQIPCTLSRAINQIQKA 417

Query: 554  RKALNNSRRKYPEDIEIAKYTGLSLAEIRSASECLRIVGSIDQKIRDCHKAKYMEFSPDM 733
            RK L+ S  KYP+D +IA++TGLSLA+I SAS CLR+VGSIDQK+ DC  AKY+EF  D 
Sbjct: 418  RKNLSASHGKYPDDEDIAEFTGLSLAKIESASRCLRVVGSIDQKMGDCFNAKYLEFIHDT 477

Query: 734  SIKSPKEIVMRQHMKKDIFHILENLDSRERQVLMLRYGLKDYRPKSLEEIGRLFHVSKEW 913
            +IKSP+E VMRQHM KD+  +L  LD+RERQVL+LRYGLKD++PKSLEEIGR+FHVSKEW
Sbjct: 478  TIKSPEEAVMRQHMIKDMHDLLRGLDTRERQVLILRYGLKDHQPKSLEEIGRVFHVSKEW 537

Query: 914  IRKLEKKAMTKLRDNETCRDLSHY 985
            +R+LEKK MT+LR+ ETCR+L +Y
Sbjct: 538  VRRLEKKVMTRLRNEETCRNLRYY 561


>XP_012077339.1 PREDICTED: RNA polymerase sigma factor sigC [Jatropha curcas]
          Length = 606

 Score =  443 bits (1139), Expect = e-147
 Identities = 218/324 (67%), Positives = 272/324 (83%)
 Frame = +2

Query: 14   LPSEALQEGLKQPAASSAKRALNSRSRRLMIARNEAEMSKGVQVVTNLERIRTTLEKESG 193
            LP +++Q G +  A S  K+  NS+SRRLMIARNEAEMS+GV+V+ NLE+IRTTLE+E+G
Sbjct: 281  LPLKSIQNG-RGKATSFDKKTSNSKSRRLMIARNEAEMSRGVKVLANLEKIRTTLEQETG 339

Query: 194  QVASLNHWAEATGVTVKELKQHLAFGWSCKEELIKSTRPLVLFLARNYRGLGIPFSDLLQ 373
            +  SL+ WAEA G+ +K L+Q L FGW C++EL++STR LVLFLARNYRG+GI   DLLQ
Sbjct: 340  RAVSLSCWAEAAGLDMKVLQQQLHFGWYCRDELVRSTRSLVLFLARNYRGMGIALEDLLQ 399

Query: 374  AGNVGVIQGAERFDHTRGYRFSTYVQYWIRKSISKMVERHARGIKIPSKVNSAINKIQKA 553
            AGN+GV+QGAERFD  RGYRFSTYVQYWIRKS+SK+V RHARGI+IP  ++ AIN+IQKA
Sbjct: 400  AGNMGVLQGAERFDDARGYRFSTYVQYWIRKSMSKIVSRHARGIQIPCTLSRAINQIQKA 459

Query: 554  RKALNNSRRKYPEDIEIAKYTGLSLAEIRSASECLRIVGSIDQKIRDCHKAKYMEFSPDM 733
            RK L+ S  KYP+D +IA++TGLSLA+I SAS CLR+VGSIDQK+ DC  AKY+EF  D 
Sbjct: 460  RKNLSASHGKYPDDEDIAEFTGLSLAKIESASRCLRVVGSIDQKMGDCFNAKYLEFIHDT 519

Query: 734  SIKSPKEIVMRQHMKKDIFHILENLDSRERQVLMLRYGLKDYRPKSLEEIGRLFHVSKEW 913
            +IKSP+E VMRQHM KD+  +L  LD+RERQVL+LRYGLKD++PKSLEEIGR+FHVSKEW
Sbjct: 520  TIKSPEEAVMRQHMIKDMHDLLRGLDTRERQVLILRYGLKDHQPKSLEEIGRVFHVSKEW 579

Query: 914  IRKLEKKAMTKLRDNETCRDLSHY 985
            +R+LEKK MT+LR+ ETCR+L +Y
Sbjct: 580  VRRLEKKVMTRLRNEETCRNLRYY 603


>ONI33721.1 hypothetical protein PRUPE_1G443200 [Prunus persica]
          Length = 553

 Score =  441 bits (1134), Expect = e-147
 Identities = 219/325 (67%), Positives = 268/325 (82%)
 Frame = +2

Query: 11   SLPSEALQEGLKQPAASSAKRALNSRSRRLMIARNEAEMSKGVQVVTNLERIRTTLEKES 190
            SLP + + +GLK+P  SS KRA N RSRRL I++NEAEMS GV+V+ +LERI+ TLEKE+
Sbjct: 226  SLPPKTIWKGLKKPTLSSGKRASNYRSRRLTISKNEAEMSIGVKVIADLERIKETLEKET 285

Query: 191  GQVASLNHWAEATGVTVKELKQHLAFGWSCKEELIKSTRPLVLFLARNYRGLGIPFSDLL 370
            G+VA+L  WAEA GV  K L QHL FGW C++ELI+STR LVL+LARNYRGLG+   DL+
Sbjct: 286  GKVATLRCWAEAAGVHEKVLLQHLRFGWYCQDELIRSTRSLVLYLARNYRGLGVALDDLM 345

Query: 371  QAGNVGVIQGAERFDHTRGYRFSTYVQYWIRKSISKMVERHARGIKIPSKVNSAINKIQK 550
            QAGN+G++QGAERFDH+RGYRFSTYVQYWIRKS+S++V +HARG++IP  ++ AIN+IQK
Sbjct: 346  QAGNLGLLQGAERFDHSRGYRFSTYVQYWIRKSMSRLVAQHARGVQIPFTLSKAINQIQK 405

Query: 551  ARKALNNSRRKYPEDIEIAKYTGLSLAEIRSASECLRIVGSIDQKIRDCHKAKYMEFSPD 730
            ARKA  NS  KYP+D EIAK TGLSLA IRSAS CLR+VGS+D K+ +     YMEF+PD
Sbjct: 406  ARKANYNSHMKYPDDEEIAKITGLSLARIRSASTCLRVVGSVDHKMWESSDGTYMEFTPD 465

Query: 731  MSIKSPKEIVMRQHMKKDIFHILENLDSRERQVLMLRYGLKDYRPKSLEEIGRLFHVSKE 910
             S+KSP+E VMRQHMKKDI  +L+ L+ RERQVL+LRYGL +Y PKSLEEIGRLFHVSKE
Sbjct: 466  TSLKSPEETVMRQHMKKDIHDLLKGLNLRERQVLVLRYGLNNYDPKSLEEIGRLFHVSKE 525

Query: 911  WIRKLEKKAMTKLRDNETCRDLSHY 985
            WIRK+EKKA+ KLR  E+ + LSHY
Sbjct: 526  WIRKIEKKALMKLRVEESHKYLSHY 550


>XP_007222923.1 hypothetical protein PRUPE_ppa003696mg [Prunus persica]
          Length = 555

 Score =  441 bits (1134), Expect = e-147
 Identities = 219/325 (67%), Positives = 268/325 (82%)
 Frame = +2

Query: 11   SLPSEALQEGLKQPAASSAKRALNSRSRRLMIARNEAEMSKGVQVVTNLERIRTTLEKES 190
            SLP + + +GLK+P  SS KRA N RSRRL I++NEAEMS GV+V+ +LERI+ TLEKE+
Sbjct: 228  SLPPKTIWKGLKKPTLSSGKRASNYRSRRLTISKNEAEMSIGVKVIADLERIKETLEKET 287

Query: 191  GQVASLNHWAEATGVTVKELKQHLAFGWSCKEELIKSTRPLVLFLARNYRGLGIPFSDLL 370
            G+VA+L  WAEA GV  K L QHL FGW C++ELI+STR LVL+LARNYRGLG+   DL+
Sbjct: 288  GKVATLRCWAEAAGVHEKVLLQHLRFGWYCQDELIRSTRSLVLYLARNYRGLGVALDDLM 347

Query: 371  QAGNVGVIQGAERFDHTRGYRFSTYVQYWIRKSISKMVERHARGIKIPSKVNSAINKIQK 550
            QAGN+G++QGAERFDH+RGYRFSTYVQYWIRKS+S++V +HARG++IP  ++ AIN+IQK
Sbjct: 348  QAGNLGLLQGAERFDHSRGYRFSTYVQYWIRKSMSRLVAQHARGVQIPFTLSKAINQIQK 407

Query: 551  ARKALNNSRRKYPEDIEIAKYTGLSLAEIRSASECLRIVGSIDQKIRDCHKAKYMEFSPD 730
            ARKA  NS  KYP+D EIAK TGLSLA IRSAS CLR+VGS+D K+ +     YMEF+PD
Sbjct: 408  ARKANYNSHMKYPDDEEIAKITGLSLARIRSASTCLRVVGSVDHKMWESSDGTYMEFTPD 467

Query: 731  MSIKSPKEIVMRQHMKKDIFHILENLDSRERQVLMLRYGLKDYRPKSLEEIGRLFHVSKE 910
             S+KSP+E VMRQHMKKDI  +L+ L+ RERQVL+LRYGL +Y PKSLEEIGRLFHVSKE
Sbjct: 468  TSLKSPEETVMRQHMKKDIHDLLKGLNLRERQVLVLRYGLNNYDPKSLEEIGRLFHVSKE 527

Query: 911  WIRKLEKKAMTKLRDNETCRDLSHY 985
            WIRK+EKKA+ KLR  E+ + LSHY
Sbjct: 528  WIRKIEKKALMKLRVEESHKYLSHY 552


>XP_018837562.1 PREDICTED: RNA polymerase sigma factor sigC-like isoform X2 [Juglans
            regia]
          Length = 517

 Score =  439 bits (1130), Expect = e-147
 Identities = 220/326 (67%), Positives = 267/326 (81%)
 Frame = +2

Query: 8    LSLPSEALQEGLKQPAASSAKRALNSRSRRLMIARNEAEMSKGVQVVTNLERIRTTLEKE 187
            LSLPS+  Q+   +P  SS KR   SR RRL IARNEAEMS+GV+VV NLERIR TLE E
Sbjct: 189  LSLPSKVNQKHFGKPTVSSVKRGSRSRIRRLKIARNEAEMSRGVKVVANLERIRITLEAE 248

Query: 188  SGQVASLNHWAEATGVTVKELKQHLAFGWSCKEELIKSTRPLVLFLARNYRGLGIPFSDL 367
            +G+VASL+ WAEA G+  K L+QHL FGW C++ELI+STR LVL+LARNYRGLGI   DL
Sbjct: 249  TGRVASLSCWAEAAGLDEKVLQQHLHFGWCCRDELIRSTRSLVLYLARNYRGLGIALEDL 308

Query: 368  LQAGNVGVIQGAERFDHTRGYRFSTYVQYWIRKSISKMVERHARGIKIPSKVNSAINKIQ 547
            LQAGN+GV+QGAERFDHTRGYRFSTYVQYWIRKS+S+MV +HARGI+IP  ++ AIN I 
Sbjct: 309  LQAGNLGVLQGAERFDHTRGYRFSTYVQYWIRKSMSRMVAQHARGIQIPYTLSRAINLIV 368

Query: 548  KARKALNNSRRKYPEDIEIAKYTGLSLAEIRSASECLRIVGSIDQKIRDCHKAKYMEFSP 727
            KARK LN +  KYP D +I+KYTGLSLA+IRSA +CLR++GSIDQKI D +  +Y E  P
Sbjct: 369  KARKDLNRTHGKYPGDDDISKYTGLSLAKIRSAGKCLRVIGSIDQKIGDHNNLQYREVMP 428

Query: 728  DMSIKSPKEIVMRQHMKKDIFHILENLDSRERQVLMLRYGLKDYRPKSLEEIGRLFHVSK 907
            D+SI+SP+E V RQHM+K+I ++L++LDSRERQVL LRYGL+D +PKSLEE GRL HVSK
Sbjct: 429  DLSIRSPEETVTRQHMRKEIHNLLKSLDSRERQVLFLRYGLEDCQPKSLEETGRLLHVSK 488

Query: 908  EWIRKLEKKAMTKLRDNETCRDLSHY 985
            EWIRK+E+KA+ +LR+ E  R LSHY
Sbjct: 489  EWIRKIERKALARLRNEEIRRSLSHY 514


>KJB65617.1 hypothetical protein B456_010G103500 [Gossypium raimondii]
          Length = 458

 Score =  437 bits (1123), Expect = e-147
 Identities = 215/324 (66%), Positives = 264/324 (81%)
 Frame = +2

Query: 14   LPSEALQEGLKQPAASSAKRALNSRSRRLMIARNEAEMSKGVQVVTNLERIRTTLEKESG 193
            LP+  L    ++P  SS KR  +SR RRL +ARNE EMSKGV+VV NLERIRTTLE+E+G
Sbjct: 132  LPTNTLHGRYQKPKRSSPKRMSDSRKRRLAVARNEVEMSKGVKVVANLERIRTTLEEETG 191

Query: 194  QVASLNHWAEATGVTVKELKQHLAFGWSCKEELIKSTRPLVLFLARNYRGLGIPFSDLLQ 373
            ++ SL+ WAEA  +T K L+QHL +GW C++ELI++TR LVL+ ARNYRGLGI   DL+Q
Sbjct: 192  RMVSLSCWAEAAKLTEKALQQHLHYGWYCRDELIRTTRSLVLYFARNYRGLGIAHEDLIQ 251

Query: 374  AGNVGVIQGAERFDHTRGYRFSTYVQYWIRKSISKMVERHARGIKIPSKVNSAINKIQKA 553
            AG++GV+QGAERFDHTRGY+FSTY+ YWIRKSIS+MV RHARGI++P  ++ AI +IQKA
Sbjct: 252  AGSIGVLQGAERFDHTRGYKFSTYIHYWIRKSISRMVARHARGIQVPCTLSRAIVQIQKA 311

Query: 554  RKALNNSRRKYPEDIEIAKYTGLSLAEIRSASECLRIVGSIDQKIRDCHKAKYMEFSPDM 733
            RKAL+ S  KYPE+ EIAK TGLSL++IRSA++C R+VGSIDQKI DC  AKY+EF PD 
Sbjct: 312  RKALSKSHGKYPEEDEIAKITGLSLSKIRSANKCFRVVGSIDQKIGDCINAKYLEFIPDA 371

Query: 734  SIKSPKEIVMRQHMKKDIFHILENLDSRERQVLMLRYGLKDYRPKSLEEIGRLFHVSKEW 913
            SI SP++ VMRQHMK+DI  +L  L+ RERQV++LRYGL    PKSLEEIGRLF VSKEW
Sbjct: 372  SICSPEKTVMRQHMKEDIHDLLNGLEKRERQVMVLRYGLTGSPPKSLEEIGRLFRVSKEW 431

Query: 914  IRKLEKKAMTKLRDNETCRDLSHY 985
            IR++E KAM KLRD ETCR+LSHY
Sbjct: 432  IRRIEMKAMAKLRDKETCRNLSHY 455


>XP_018837561.1 PREDICTED: RNA polymerase sigma factor sigC-like isoform X1 [Juglans
            regia]
          Length = 556

 Score =  439 bits (1130), Expect = e-147
 Identities = 220/326 (67%), Positives = 267/326 (81%)
 Frame = +2

Query: 8    LSLPSEALQEGLKQPAASSAKRALNSRSRRLMIARNEAEMSKGVQVVTNLERIRTTLEKE 187
            LSLPS+  Q+   +P  SS KR   SR RRL IARNEAEMS+GV+VV NLERIR TLE E
Sbjct: 228  LSLPSKVNQKHFGKPTVSSVKRGSRSRIRRLKIARNEAEMSRGVKVVANLERIRITLEAE 287

Query: 188  SGQVASLNHWAEATGVTVKELKQHLAFGWSCKEELIKSTRPLVLFLARNYRGLGIPFSDL 367
            +G+VASL+ WAEA G+  K L+QHL FGW C++ELI+STR LVL+LARNYRGLGI   DL
Sbjct: 288  TGRVASLSCWAEAAGLDEKVLQQHLHFGWCCRDELIRSTRSLVLYLARNYRGLGIALEDL 347

Query: 368  LQAGNVGVIQGAERFDHTRGYRFSTYVQYWIRKSISKMVERHARGIKIPSKVNSAINKIQ 547
            LQAGN+GV+QGAERFDHTRGYRFSTYVQYWIRKS+S+MV +HARGI+IP  ++ AIN I 
Sbjct: 348  LQAGNLGVLQGAERFDHTRGYRFSTYVQYWIRKSMSRMVAQHARGIQIPYTLSRAINLIV 407

Query: 548  KARKALNNSRRKYPEDIEIAKYTGLSLAEIRSASECLRIVGSIDQKIRDCHKAKYMEFSP 727
            KARK LN +  KYP D +I+KYTGLSLA+IRSA +CLR++GSIDQKI D +  +Y E  P
Sbjct: 408  KARKDLNRTHGKYPGDDDISKYTGLSLAKIRSAGKCLRVIGSIDQKIGDHNNLQYREVMP 467

Query: 728  DMSIKSPKEIVMRQHMKKDIFHILENLDSRERQVLMLRYGLKDYRPKSLEEIGRLFHVSK 907
            D+SI+SP+E V RQHM+K+I ++L++LDSRERQVL LRYGL+D +PKSLEE GRL HVSK
Sbjct: 468  DLSIRSPEETVTRQHMRKEIHNLLKSLDSRERQVLFLRYGLEDCQPKSLEETGRLLHVSK 527

Query: 908  EWIRKLEKKAMTKLRDNETCRDLSHY 985
            EWIRK+E+KA+ +LR+ E  R LSHY
Sbjct: 528  EWIRKIERKALARLRNEEIRRSLSHY 553


>XP_010047303.1 PREDICTED: RNA polymerase sigma factor sigC [Eucalyptus grandis]
            KCW79185.1 hypothetical protein EUGRSUZ_C00620
            [Eucalyptus grandis]
          Length = 556

 Score =  438 bits (1127), Expect = e-146
 Identities = 216/325 (66%), Positives = 269/325 (82%)
 Frame = +2

Query: 11   SLPSEALQEGLKQPAASSAKRALNSRSRRLMIARNEAEMSKGVQVVTNLERIRTTLEKES 190
            SL S A Q+ L+QP+ SS +RA NS+ RR +IARNEAEMS+GV+VV  LE++R  LE+ES
Sbjct: 229  SLLSTANQKWLQQPSVSSLRRASNSKRRRSIIARNEAEMSRGVKVVAELEKLRAILEEES 288

Query: 191  GQVASLNHWAEATGVTVKELKQHLAFGWSCKEELIKSTRPLVLFLARNYRGLGIPFSDLL 370
            GQV SL  WAEA GV    L+Q+L FGW C++EL++STR LV+FL RNYRGLGI   DL+
Sbjct: 289  GQVPSLRTWAEAAGVDENVLRQNLHFGWFCRDELLRSTRSLVIFLTRNYRGLGIAHEDLI 348

Query: 371  QAGNVGVIQGAERFDHTRGYRFSTYVQYWIRKSISKMVERHARGIKIPSKVNSAINKIQK 550
            QAGN+GV++GAERFDHTRGYRFSTYVQYWIRKS+S+MV  HARGI+IP+ + +A+N+IQK
Sbjct: 349  QAGNMGVLRGAERFDHTRGYRFSTYVQYWIRKSMSRMVAWHARGIRIPTTLATAVNQIQK 408

Query: 551  ARKALNNSRRKYPEDIEIAKYTGLSLAEIRSASECLRIVGSIDQKIRDCHKAKYMEFSPD 730
            A+K+LNN RRKYP+D+EIAK TG S+A++RSAS+CLR+VGSIDQKI DC  AKYMEF+PD
Sbjct: 409  AQKSLNNHRRKYPDDMEIAKLTGFSVAKVRSASQCLRVVGSIDQKIGDCINAKYMEFTPD 468

Query: 731  MSIKSPKEIVMRQHMKKDIFHILENLDSRERQVLMLRYGLKDYRPKSLEEIGRLFHVSKE 910
             S++SP+E V+RQ+M   I  +L  LD RERQVL+LRYGLKD + KSLEEIGRLF+VSKE
Sbjct: 469  RSLRSPEETVLRQNMSSQIQELLSGLDFRERQVLILRYGLKDNQVKSLEEIGRLFNVSKE 528

Query: 911  WIRKLEKKAMTKLRDNETCRDLSHY 985
            WIR++E+KAM KLRD +    LSHY
Sbjct: 529  WIRRIERKAMEKLRDKDVYSSLSHY 553


>XP_004291147.1 PREDICTED: RNA polymerase sigma factor sigC [Fragaria vesca subsp.
            vesca]
          Length = 545

 Score =  436 bits (1122), Expect = e-146
 Identities = 213/325 (65%), Positives = 270/325 (83%)
 Frame = +2

Query: 11   SLPSEALQEGLKQPAASSAKRALNSRSRRLMIARNEAEMSKGVQVVTNLERIRTTLEKES 190
            +LP + ++EG K+P  SS +RA NSRSRRLM+A+NEAEMS GV+V+ +LER++ TLEKE+
Sbjct: 217  TLPVKQMREGFKKPNPSSVRRASNSRSRRLMMAKNEAEMSVGVKVIADLERLKVTLEKET 276

Query: 191  GQVASLNHWAEATGVTVKELKQHLAFGWSCKEELIKSTRPLVLFLARNYRGLGIPFSDLL 370
            G+V +L  WAEA GV  K L+Q L FGW C++EL++STR LVL+LARNYRGLG+   DLL
Sbjct: 277  GKVPTLRCWAEAAGVDEKVLQQQLHFGWYCQDELVRSTRSLVLYLARNYRGLGVALDDLL 336

Query: 371  QAGNVGVIQGAERFDHTRGYRFSTYVQYWIRKSISKMVERHARGIKIPSKVNSAINKIQK 550
            QAGN+G++QGAERFD +RGYRFSTYVQYWIRKS+S++V +HARGIKIP+ ++ AIN+IQK
Sbjct: 337  QAGNLGLLQGAERFDPSRGYRFSTYVQYWIRKSMSRLVAQHARGIKIPNTLSKAINRIQK 396

Query: 551  ARKALNNSRRKYPEDIEIAKYTGLSLAEIRSASECLRIVGSIDQKIRDCHKAKYMEFSPD 730
            ARKA  NS  KYP+D EIAK TGLSLA+I SAS CLR+VGS+D KI +C    YMEF+PD
Sbjct: 397  ARKANYNSHMKYPDDEEIAKITGLSLAKISSASRCLRVVGSVDHKIWECSAGTYMEFTPD 456

Query: 731  MSIKSPKEIVMRQHMKKDIFHILENLDSRERQVLMLRYGLKDYRPKSLEEIGRLFHVSKE 910
            +++++P+E VMRQHMK DI  +LE L+SRE++VL LRYGL    PKSLEEIGRLFHVSKE
Sbjct: 457  IAVETPEESVMRQHMKNDIHVLLEGLNSREKKVLALRYGLNYCNPKSLEEIGRLFHVSKE 516

Query: 911  WIRKLEKKAMTKLRDNETCRDLSHY 985
            WIRK+EK A+TKLR+ E+ ++LSHY
Sbjct: 517  WIRKIEKNALTKLRNEESNKNLSHY 541


>XP_012450465.1 PREDICTED: RNA polymerase sigma factor sigC-like isoform X4
            [Gossypium raimondii] KJB65615.1 hypothetical protein
            B456_010G103500 [Gossypium raimondii]
          Length = 565

 Score =  437 bits (1123), Expect = e-145
 Identities = 215/324 (66%), Positives = 264/324 (81%)
 Frame = +2

Query: 14   LPSEALQEGLKQPAASSAKRALNSRSRRLMIARNEAEMSKGVQVVTNLERIRTTLEKESG 193
            LP+  L    ++P  SS KR  +SR RRL +ARNE EMSKGV+VV NLERIRTTLE+E+G
Sbjct: 239  LPTNTLHGRYQKPKRSSPKRMSDSRKRRLAVARNEVEMSKGVKVVANLERIRTTLEEETG 298

Query: 194  QVASLNHWAEATGVTVKELKQHLAFGWSCKEELIKSTRPLVLFLARNYRGLGIPFSDLLQ 373
            ++ SL+ WAEA  +T K L+QHL +GW C++ELI++TR LVL+ ARNYRGLGI   DL+Q
Sbjct: 299  RMVSLSCWAEAAKLTEKALQQHLHYGWYCRDELIRTTRSLVLYFARNYRGLGIAHEDLIQ 358

Query: 374  AGNVGVIQGAERFDHTRGYRFSTYVQYWIRKSISKMVERHARGIKIPSKVNSAINKIQKA 553
            AG++GV+QGAERFDHTRGY+FSTY+ YWIRKSIS+MV RHARGI++P  ++ AI +IQKA
Sbjct: 359  AGSIGVLQGAERFDHTRGYKFSTYIHYWIRKSISRMVARHARGIQVPCTLSRAIVQIQKA 418

Query: 554  RKALNNSRRKYPEDIEIAKYTGLSLAEIRSASECLRIVGSIDQKIRDCHKAKYMEFSPDM 733
            RKAL+ S  KYPE+ EIAK TGLSL++IRSA++C R+VGSIDQKI DC  AKY+EF PD 
Sbjct: 419  RKALSKSHGKYPEEDEIAKITGLSLSKIRSANKCFRVVGSIDQKIGDCINAKYLEFIPDA 478

Query: 734  SIKSPKEIVMRQHMKKDIFHILENLDSRERQVLMLRYGLKDYRPKSLEEIGRLFHVSKEW 913
            SI SP++ VMRQHMK+DI  +L  L+ RERQV++LRYGL    PKSLEEIGRLF VSKEW
Sbjct: 479  SICSPEKTVMRQHMKEDIHDLLNGLEKRERQVMVLRYGLTGSPPKSLEEIGRLFRVSKEW 538

Query: 914  IRKLEKKAMTKLRDNETCRDLSHY 985
            IR++E KAM KLRD ETCR+LSHY
Sbjct: 539  IRRIEMKAMAKLRDKETCRNLSHY 562