BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Perilla23_contig00028785
         (583 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN76473.1| hypothetical protein VITISV_016007 [Vitis vinifera]   163   2e-42
emb|CAN83392.1| hypothetical protein VITISV_041406 [Vitis vinifera]   157   3e-42
gb|KHN36156.1| Retrovirus-related Pol polyprotein from transposo...   163   4e-42
gb|KHN22040.1| Retrovirus-related Pol polyprotein from transposo...   163   4e-42
gb|AAN06870.1| Putative gag-pol polyprotein [Oryza sativa Japoni...   160   6e-42
gb|AAL66754.1|AF464738_5 putative copia-like retrotransposon Hop...   162   7e-42
emb|CAN61322.1| hypothetical protein VITISV_012106 [Vitis vinifera]   156   1e-41
ref|XP_006580846.1| PREDICTED: uncharacterized mitochondrial pro...   158   2e-41
gb|AAU43956.1| unknown protein [Oryza sativa Japonica Group] gi|...   154   3e-41
emb|CAN81355.1| hypothetical protein VITISV_039158 [Vitis vinifera]   159   3e-41
emb|CAN67588.1| hypothetical protein VITISV_036280 [Vitis vinifera]   159   4e-41
ref|XP_012701436.1| PREDICTED: uncharacterized protein LOC105914...   160   4e-41
dbj|BAB90546.1| putative rice retrotransposon retrofit gag/pol p...   159   8e-41
emb|CAN73924.1| hypothetical protein VITISV_041509 [Vitis vinifera]   157   8e-41
emb|CAN79148.1| hypothetical protein VITISV_004343 [Vitis vinifera]   157   8e-41
emb|CAN63683.1| hypothetical protein VITISV_030301 [Vitis vinifera]   157   1e-40
gb|ACV42639.1| gag/pol [Oryza sativa Japonica Group]                  159   1e-40
emb|CAN67546.1| hypothetical protein VITISV_027734 [Vitis vinifera]   154   2e-40
emb|CAN78451.1| hypothetical protein VITISV_005945 [Vitis vinifera]   155   2e-40
gb|AAK02020.2|AC074283_1 Putative gag-pol polyprotein [Oryza sat...   154   2e-40

>emb|CAN76473.1| hypothetical protein VITISV_016007 [Vitis vinifera]
          Length = 1002

 Score =  163 bits (413), Expect(2) = 2e-42
 Identities = 77/158 (48%), Positives = 105/158 (66%)
 Frame = -2

Query: 477  LKANMVDTNGIATPMITSTPLSRFEGQPTVDPTHYRRIVGALQYVTVTRPDIAYSVNKII 298
            +K  M     + TPM  +  L    G    DPT YR  +GALQY+T TRPDIA++VNK+ 
Sbjct: 746  IKTKMHSAKPVPTPMSAALKLHAASGPAFSDPTLYRSTIGALQYLTYTRPDIAFAVNKLS 805

Query: 297  QYMHNPLDLHWKAVKRILRYLAGTIHYGLHLSPSADL*IRVYXXXXXXXXXXXRKSMSGF 118
            QY+  P +LHW A KR+LRYL G +H GLH +P++ L ++VY           R+S +G+
Sbjct: 806  QYLQQPTELHWTACKRVLRYLKGIVHRGLHFTPASSLHLQVYTDADWASSIDDRRSTTGY 865

Query: 117  CIFLGQNLISWSARKQPTVSRSSTEAEFRSLTHATSEV 4
            C+FLG NL +WS+RKQP V+RSST+AE+R+L HA+ EV
Sbjct: 866  CVFLGTNLFTWSSRKQPVVARSSTKAEYRALAHASXEV 903



 Score = 36.6 bits (83), Expect(2) = 2e-42
 Identities = 16/36 (44%), Positives = 25/36 (69%)
 Frame = -1

Query: 583 DDIIITGSELSNLSTLICSLKKHFSLKDMGSLSHFL 476
           DD++ITG+ +  + TLI  L+  F+LKD+G +  FL
Sbjct: 687 DDLLITGNNVPLVQTLIQDLQNRFALKDLGLVKDFL 722


>emb|CAN83392.1| hypothetical protein VITISV_041406 [Vitis vinifera]
          Length = 1262

 Score =  157 bits (398), Expect(2) = 3e-42
 Identities = 80/158 (50%), Positives = 104/158 (65%)
 Frame = -2

Query: 474  KANMVDTNGIATPMITSTPLSRFEGQPTVDPTHYRRIVGALQYVTVTRPDIAYSVNKIIQ 295
            K  M     + TPM++   LS   G P  +   YR +VGALQY+T+TRP+IA+SVNK+ Q
Sbjct: 1005 KTKMDGAKSLPTPMLSGLKLSAGMGDPIDNVFEYRSVVGALQYITITRPEIAFSVNKVCQ 1064

Query: 294  YMHNPLDLHWKAVKRILRYLAGTIHYGLHLSPSADL*IRVYXXXXXXXXXXXRKSMSGFC 115
            +M  PLD HWKAVKRILRYL GT   G+ L PS  + +  +           R+S SG C
Sbjct: 1065 FMQKPLDTHWKAVKRILRYLNGTTDLGIVLKPSETMNLVGFCDADWGSDVDDRRSTSGHC 1124

Query: 114  IFLGQNLISWSARKQPTVSRSSTEAEFRSLTHATSEVL 1
            +FLG++L+SWS++KQ T SRSSTEAE+RSL   TSE+L
Sbjct: 1125 VFLGKSLVSWSSKKQHTTSRSSTEAEYRSLASLTSEML 1162



 Score = 41.2 bits (95), Expect(2) = 3e-42
 Identities = 19/36 (52%), Positives = 25/36 (69%)
 Frame = -1

Query: 583  DDIIITGSELSNLSTLICSLKKHFSLKDMGSLSHFL 476
            DDI++TGS    +  LI  L+  FSLKD+G LS+FL
Sbjct: 944  DDIVVTGSSSQEIHELISRLRGLFSLKDLGELSYFL 979


>gb|KHN36156.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Glycine soja]
          Length = 1417

 Score =  163 bits (413), Expect(2) = 4e-42
 Identities = 84/161 (52%), Positives = 112/161 (69%), Gaps = 3/161 (1%)
 Frame = -2

Query: 474  KANMVDTNGIATPMITSTPLSRFEGQPTVDPTHYRRIVGALQYVTVTRPDIAYSVNKIIQ 295
            KA+M D+  I +PM++S  LS++      DPT YR IVGALQY T+TRPDIA+SVNK+ Q
Sbjct: 1167 KAHMEDSAPIGSPMVSSCRLSKYGSDTMTDPTLYRSIVGALQYATLTRPDIAFSVNKVCQ 1226

Query: 294  YMHNPLDLHWKAVKRILRYLAGTIHYGLHLSP---SADL*IRVYXXXXXXXXXXXRKSMS 124
            +M +PL+ HWKAVKRILRYL GT+ +GL L+P   S    +R Y           R+S S
Sbjct: 1227 FMAHPLESHWKAVKRILRYLNGTLSHGLLLTPSPTSPPFSLRAYSDADWATDQDDRRSTS 1286

Query: 123  GFCIFLGQNLISWSARKQPTVSRSSTEAEFRSLTHATSEVL 1
            G CI+ G NLISW ++KQ  V+RSSTEAE+RS+ + T+++L
Sbjct: 1287 GSCIYFGPNLISWGSKKQQLVARSSTEAEYRSMANTTADLL 1327



 Score = 35.0 bits (79), Expect(2) = 4e-42
 Identities = 17/36 (47%), Positives = 23/36 (63%)
 Frame = -1

Query: 583  DDIIITGSELSNLSTLICSLKKHFSLKDMGSLSHFL 476
            DDI+ITGS    +S LI  L   F+LK +G + +FL
Sbjct: 1106 DDILITGSAPHLISDLIHKLNMKFALKQLGQIDYFL 1141


>gb|KHN22040.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Glycine soja]
          Length = 1417

 Score =  163 bits (413), Expect(2) = 4e-42
 Identities = 84/161 (52%), Positives = 112/161 (69%), Gaps = 3/161 (1%)
 Frame = -2

Query: 474  KANMVDTNGIATPMITSTPLSRFEGQPTVDPTHYRRIVGALQYVTVTRPDIAYSVNKIIQ 295
            KA+M D+  I +PM++S  LS++      DPT YR IVGALQY T+TRPDIA+SVNK+ Q
Sbjct: 1167 KAHMEDSAPIGSPMVSSCRLSKYGSDTMTDPTLYRSIVGALQYATLTRPDIAFSVNKVCQ 1226

Query: 294  YMHNPLDLHWKAVKRILRYLAGTIHYGLHLSP---SADL*IRVYXXXXXXXXXXXRKSMS 124
            +M +PL+ HWKAVKRILRYL GT+ +GL L+P   S    +R Y           R+S S
Sbjct: 1227 FMAHPLESHWKAVKRILRYLNGTLSHGLLLTPSPTSPPFSLRAYSDADWATDQDDRRSTS 1286

Query: 123  GFCIFLGQNLISWSARKQPTVSRSSTEAEFRSLTHATSEVL 1
            G CI+ G NLISW ++KQ  V+RSSTEAE+RS+ + T+++L
Sbjct: 1287 GSCIYFGPNLISWGSKKQQLVARSSTEAEYRSMANTTADLL 1327



 Score = 35.0 bits (79), Expect(2) = 4e-42
 Identities = 17/36 (47%), Positives = 23/36 (63%)
 Frame = -1

Query: 583  DDIIITGSELSNLSTLICSLKKHFSLKDMGSLSHFL 476
            DDI+ITGS    +S LI  L   F+LK +G + +FL
Sbjct: 1106 DDILITGSAPHLISDLIHKLNMKFALKQLGQIDYFL 1141


>gb|AAN06870.1| Putative gag-pol polyprotein [Oryza sativa Japonica Group]
            gi|108706314|gb|ABF94109.1| retrotransposon protein,
            putative, Ty1-copia subclass [Oryza sativa Japonica
            Group]
          Length = 1247

 Score =  160 bits (405), Expect(2) = 6e-42
 Identities = 82/160 (51%), Positives = 106/160 (66%), Gaps = 2/160 (1%)
 Frame = -2

Query: 474  KANMVDTNGIATPMITSTPLSRFEGQPTV--DPTHYRRIVGALQYVTVTRPDIAYSVNKI 301
            + NM D   ++TP+ TS  LS  EG P    D THYR +VGALQY+T+TRPDIA+ VNK+
Sbjct: 994  RVNMFDCKPVSTPLSTSEKLSINEGDPLGPNDATHYRSVVGALQYLTLTRPDIAFPVNKV 1053

Query: 300  IQYMHNPLDLHWKAVKRILRYLAGTIHYGLHLSPSADL*IRVYXXXXXXXXXXXRKSMSG 121
             Q++H P   HW AVKRILRYL      GL LS S  + +  Y           R+S  G
Sbjct: 1054 CQFLHAPTTHHWAAVKRILRYLKQCTRLGLKLSKSRSMLVSAYSDADWAGSLDDRRSTGG 1113

Query: 120  FCIFLGQNLISWSARKQPTVSRSSTEAEFRSLTHATSEVL 1
            F +FLG NL+SWSARKQ TVSRSSTE+E+++L +AT+E++
Sbjct: 1114 FAVFLGDNLVSWSARKQATVSRSSTESEYKALANATAEIM 1153



 Score = 37.7 bits (86), Expect(2) = 6e-42
 Identities = 17/36 (47%), Positives = 24/36 (66%)
 Frame = -1

Query: 583  DDIIITGSELSNLSTLICSLKKHFSLKDMGSLSHFL 476
            DDII+T S    +  L+  L+K F+LKD+G L +FL
Sbjct: 934  DDIIVTSSRQEAVPALLRDLQKEFALKDLGDLHYFL 969


>gb|AAL66754.1|AF464738_5 putative copia-like retrotransposon Hopscotch polyprotein [Zea mays]
          Length = 1313

 Score =  162 bits (409), Expect(2) = 7e-42
 Identities = 84/160 (52%), Positives = 107/160 (66%), Gaps = 2/160 (1%)
 Frame = -2

Query: 474  KANMVDTNGIATPMITSTPLSRFEGQPT--VDPTHYRRIVGALQYVTVTRPDIAYSVNKI 301
            K  M D   I+TP+ TS  LS  EG P    D T YR IVGALQY+T+TRPDIA+SVNK+
Sbjct: 1060 KVGMSDCKPISTPLSTSEKLSIHEGSPLGEKDITQYRSIVGALQYLTLTRPDIAFSVNKV 1119

Query: 300  IQYMHNPLDLHWKAVKRILRYLAGTIHYGLHLSPSADL*IRVYXXXXXXXXXXXRKSMSG 121
             Q++H P  LHW AVKRILRY+    + GLH+  S    +  +           RKS  G
Sbjct: 1120 CQFLHAPTTLHWAAVKRILRYIKQCTNLGLHIHRSDSTLVSAFSDADWAGSVDDRKSTGG 1179

Query: 120  FCIFLGQNLISWSARKQPTVSRSSTEAEFRSLTHATSEVL 1
            F +FLG NL+SWSARKQPTVSRSSTE+E+++L +AT+E++
Sbjct: 1180 FAVFLGSNLVSWSARKQPTVSRSSTESEYKALANATAELI 1219



 Score = 35.8 bits (81), Expect(2) = 7e-42
 Identities = 16/36 (44%), Positives = 22/36 (61%)
 Frame = -1

Query: 583  DDIIITGSELSNLSTLICSLKKHFSLKDMGSLSHFL 476
            DDII+  S       L+  L K F+LKD+G L++FL
Sbjct: 1000 DDIIVASSTHKATEALLSDLNKEFALKDLGDLNYFL 1035


>emb|CAN61322.1| hypothetical protein VITISV_012106 [Vitis vinifera]
          Length = 1432

 Score =  156 bits (394), Expect(2) = 1e-41
 Identities = 78/158 (49%), Positives = 103/158 (65%)
 Frame = -2

Query: 474  KANMVDTNGIATPMITSTPLSRFEGQPTVDPTHYRRIVGALQYVTVTRPDIAYSVNKIIQ 295
            +  + DT    TP      LS+F+G P  D THYR +VGALQYVT+TRPDIA++VNK  Q
Sbjct: 1143 RTELFDTKPANTPGAVGKNLSKFDGDPMTDVTHYRSVVGALQYVTLTRPDIAFAVNKACQ 1202

Query: 294  YMHNPLDLHWKAVKRILRYLAGTIHYGLHLSPSADL*IRVYXXXXXXXXXXXRKSMSGFC 115
            +M  P   HW +VKRILRYL GT+  GL  SPS++L I  +           R+S SG+ 
Sbjct: 1203 FMQQPTTAHWLSVKRILRYLRGTMQDGLLFSPSSNLTIEGFTDADWGAHLDDRRSSSGYL 1262

Query: 114  IFLGQNLISWSARKQPTVSRSSTEAEFRSLTHATSEVL 1
            ++LG NL+SWS+ KQ  VSRSS E+E+R L  AT+E++
Sbjct: 1263 VYLGGNLVSWSSTKQKVVSRSSAESEYRGLVFATAEIV 1300



 Score = 40.8 bits (94), Expect(2) = 1e-41
 Identities = 18/36 (50%), Positives = 26/36 (72%)
 Frame = -1

Query: 583  DDIIITGSELSNLSTLICSLKKHFSLKDMGSLSHFL 476
            DDI++TGS  + +S+LI  L   F+L+D+G LS FL
Sbjct: 1083 DDILVTGSSSTQISSLIAKLDSVFALRDLGQLSFFL 1118


>ref|XP_006580846.1| PREDICTED: uncharacterized mitochondrial protein AtMg00810-like
           [Glycine max]
          Length = 228

 Score =  158 bits (400), Expect(2) = 2e-41
 Identities = 77/161 (47%), Positives = 109/161 (67%), Gaps = 3/161 (1%)
 Frame = -2

Query: 474 KANMVDTNGIATPMITSTPLSRFEGQPTVDPTHYRRIVGALQYVTVTRPDIAYSVNKIIQ 295
           K NM   NG+ TPM++S  LS+       DPT +R +VGALQY T+TRP+I++SVNK+ Q
Sbjct: 68  KVNMTSANGMPTPMVSSNKLSKIGSNEVDDPTQFRSVVGALQYATLTRPEISFSVNKVCQ 127

Query: 294 YMHNPLDLHWKAVKRILRYLAGTIHYGLHLSPSA---DL*IRVYXXXXXXXXXXXRKSMS 124
           ++ NPL+ HWKAVKRILRYL+GT H+GL + P++    L +  +           R+S S
Sbjct: 128 FLSNPLEEHWKAVKRILRYLSGTKHHGLLIQPASLQQPLHLLGFCDADWASDPDDRRSTS 187

Query: 123 GFCIFLGQNLISWSARKQPTVSRSSTEAEFRSLTHATSEVL 1
             C+FLG NL+SW ++KQ  V+RSS EAE+R++ H  +E+L
Sbjct: 188 SACVFLGPNLVSWWSKKQQLVARSSAEAEYRNMAHLAAELL 228



 Score = 37.7 bits (86), Expect(2) = 2e-41
 Identities = 19/36 (52%), Positives = 24/36 (66%)
 Frame = -1

Query: 583 DDIIITGSELSNLSTLICSLKKHFSLKDMGSLSHFL 476
           DDIIITG+  S ++ LI  L   FSLK +G L +FL
Sbjct: 7   DDIIITGNSASFITALIKHLNDVFSLKQLGKLDYFL 42


>gb|AAU43956.1| unknown protein [Oryza sativa Japonica Group]
            gi|52353503|gb|AAU44069.1| putative polyprotein [Oryza
            sativa Japonica Group]
          Length = 1447

 Score =  154 bits (390), Expect(2) = 3e-41
 Identities = 78/160 (48%), Positives = 105/160 (65%), Gaps = 2/160 (1%)
 Frame = -2

Query: 474  KANMVDTNGIATPMITSTPLSRFEGQ--PTVDPTHYRRIVGALQYVTVTRPDIAYSVNKI 301
            + NM D   ++TP+ TS  LS  EG     +D T+YR +VGALQY+T+TRPDIA+ VNK+
Sbjct: 1194 RVNMFDCKPVSTPLSTSEKLSAHEGDLLGPLDATNYRSVVGALQYLTLTRPDIAFPVNKV 1253

Query: 300  IQYMHNPLDLHWKAVKRILRYLAGTIHYGLHLSPSADL*IRVYXXXXXXXXXXXRKSMSG 121
             Q++H P  +HW AVKRILRYL      GL L  S  + +  Y           R+S  G
Sbjct: 1254 CQFLHAPTTVHWAAVKRILRYLKQCTKLGLKLCKSKSMLVSAYSDADWAGSLDDRRSTGG 1313

Query: 120  FCIFLGQNLISWSARKQPTVSRSSTEAEFRSLTHATSEVL 1
            F +FLG NL+SW ARKQ TVSRSSTE+E+++L +AT+E++
Sbjct: 1314 FAVFLGDNLVSWCARKQATVSRSSTESEYKALANATAEIM 1353



 Score = 41.2 bits (95), Expect(2) = 3e-41
 Identities = 19/36 (52%), Positives = 25/36 (69%)
 Frame = -1

Query: 583  DDIIITGSELSNLSTLICSLKKHFSLKDMGSLSHFL 476
            DDII+T S    +S L+  LKK F+LKD+G L +FL
Sbjct: 1134 DDIIVTSSRQEAVSALLQDLKKEFALKDLGDLHYFL 1169


>emb|CAN81355.1| hypothetical protein VITISV_039158 [Vitis vinifera]
          Length = 1402

 Score =  159 bits (402), Expect(2) = 3e-41
 Identities = 79/158 (50%), Positives = 104/158 (65%)
 Frame = -2

Query: 474  KANMVDTNGIATPMITSTPLSRFEGQPTVDPTHYRRIVGALQYVTVTRPDIAYSVNKIIQ 295
            + +M+D+   ATP      LS+F+G    D T YR +VGALQY T+TRPDIA+S+NK  Q
Sbjct: 1123 RTSMLDSKAAATPGTVGLSLSQFDGDLMDDVTMYRSVVGALQYATLTRPDIAFSINKACQ 1182

Query: 294  YMHNPLDLHWKAVKRILRYLAGTIHYGLHLSPSADL*IRVYXXXXXXXXXXXRKSMSGFC 115
            +MH P   HW +VKRILRYL GTI +GL L PSA   I+ Y           R+S SG+ 
Sbjct: 1183 FMHRPTSTHWSSVKRILRYLKGTITHGLLLQPSAHFTIQAYTDADWGAQPDDRRSSSGYL 1242

Query: 114  IFLGQNLISWSARKQPTVSRSSTEAEFRSLTHATSEVL 1
            ++LG NL+SW+A KQ  VSRSS E+E+R L  AT+E++
Sbjct: 1243 VYLGNNLVSWTASKQKVVSRSSAESEYRGLAIATAEII 1280



 Score = 36.6 bits (83), Expect(2) = 3e-41
 Identities = 18/36 (50%), Positives = 24/36 (66%)
 Frame = -1

Query: 583  DDIIITGSELSNLSTLICSLKKHFSLKDMGSLSHFL 476
            DDII+TGS    +  LI  L   F+L+D+G LS+FL
Sbjct: 1063 DDIIVTGSSPILIQQLIHKLHSLFALRDLGQLSYFL 1098


>emb|CAN67588.1| hypothetical protein VITISV_036280 [Vitis vinifera]
          Length = 1379

 Score =  159 bits (401), Expect(2) = 4e-41
 Identities = 77/158 (48%), Positives = 112/158 (70%)
 Frame = -2

Query: 474  KANMVDTNGIATPMITSTPLSRFEGQPTVDPTHYRRIVGALQYVTVTRPDIAYSVNKIIQ 295
            +A ++D+  + TPMI S  LS  EG P  DPT YR +VGALQY+T+TRP++A+S+N + Q
Sbjct: 533  RAQLLDSKPVPTPMIVSQRLSS-EGTPFADPTLYRSLVGALQYLTITRPNLAHSINSVSQ 591

Query: 294  YMHNPLDLHWKAVKRILRYLAGTIHYGLHLSPSADL*IRVYXXXXXXXXXXXRKSMSGFC 115
            ++H P ++H++AVKRILRY+ GT+H+GL  +  + + +  Y           R+S SG+ 
Sbjct: 592  FLHAPTEVHFQAVKRILRYVQGTLHFGLKFTSCSSMGLVAYSDADWAGCPDTRRSTSGYS 651

Query: 114  IFLGQNLISWSARKQPTVSRSSTEAEFRSLTHATSEVL 1
            IFLG NL+SWSA+KQPTVSRSS E+E+R+L    ++VL
Sbjct: 652  IFLGNNLVSWSAKKQPTVSRSSCESEYRALALTAAKVL 689



 Score = 36.6 bits (83), Expect(2) = 4e-41
 Identities = 16/36 (44%), Positives = 25/36 (69%)
 Frame = -1

Query: 583 DDIIITGSELSNLSTLICSLKKHFSLKDMGSLSHFL 476
           DDII+TG+  + ++  I  L   F++KD+G LS+FL
Sbjct: 473 DDIILTGNNPALINRFISQLHSEFAVKDLGPLSYFL 508


>ref|XP_012701436.1| PREDICTED: uncharacterized protein LOC105914402 [Setaria italica]
          Length = 993

 Score =  160 bits (404), Expect(2) = 4e-41
 Identities = 81/160 (50%), Positives = 109/160 (68%), Gaps = 2/160 (1%)
 Frame = -2

Query: 474  KANMVDTNGIATPMITSTPLSRFEGQPT--VDPTHYRRIVGALQYVTVTRPDIAYSVNKI 301
            +  M D   ++TPM TS  LS  EG P    D T YR +VGALQY+T+TRPDI+++VNK+
Sbjct: 739  RVGMKDCKPVSTPMSTSEKLSAQEGTPLGPKDATAYRSVVGALQYLTLTRPDISFAVNKV 798

Query: 300  IQYMHNPLDLHWKAVKRILRYLAGTIHYGLHLSPSADL*IRVYXXXXXXXXXXXRKSMSG 121
             QY+H P  LHW AVKRILRYL  T+  GL +S ++ L +  +           R+S  G
Sbjct: 799  CQYLHAPTTLHWAAVKRILRYLKHTMKIGLRISKTSSLLVSAFSDADWAGDVDDRRSTGG 858

Query: 120  FCIFLGQNLISWSARKQPTVSRSSTEAEFRSLTHATSEVL 1
            F +FLG NLI+WSARKQ TVSRSSTEAE++++ +AT+E++
Sbjct: 859  FAVFLGSNLIAWSARKQATVSRSSTEAEYKAVANATAEIM 898



 Score = 35.4 bits (80), Expect(2) = 4e-41
 Identities = 16/36 (44%), Positives = 23/36 (63%)
 Frame = -1

Query: 583 DDIIITGSELSNLSTLICSLKKHFSLKDMGSLSHFL 476
           DDII+  S     + L+  L+K F+LKD+G L +FL
Sbjct: 679 DDIIVASSAQEATTCLLQDLRKEFALKDLGELHYFL 714


>dbj|BAB90546.1| putative rice retrotransposon retrofit gag/pol polyprotein [Oryza
            sativa Japonica Group]
          Length = 1448

 Score =  159 bits (403), Expect(2) = 8e-41
 Identities = 82/160 (51%), Positives = 106/160 (66%), Gaps = 2/160 (1%)
 Frame = -2

Query: 474  KANMVDTNGIATPMITSTPLSRFEGQPTV--DPTHYRRIVGALQYVTVTRPDIAYSVNKI 301
            + NM +   ++TP+  S  L+ +EG P    D T YR IVGALQY+T+TRPDIAYSVNK+
Sbjct: 1195 RVNMSNCKPVSTPLSVSEKLTLYEGSPLGPNDATQYRSIVGALQYLTLTRPDIAYSVNKV 1254

Query: 300  IQYMHNPLDLHWKAVKRILRYLAGTIHYGLHLSPSADL*IRVYXXXXXXXXXXXRKSMSG 121
             Q++H P   HW AVKRILRYL      GLH+  SA   +  Y           RKS  G
Sbjct: 1255 CQFLHAPTTSHWIAVKRILRYLNQCTSLGLHVHKSASTLVHGYSDADGAGSIDDRKSTGG 1314

Query: 120  FCIFLGQNLISWSARKQPTVSRSSTEAEFRSLTHATSEVL 1
            F +FLG NL+SWSARKQPTVSRSSTEAE++++ + T+E++
Sbjct: 1315 FAVFLGSNLVSWSARKQPTVSRSSTEAEYKAVANTTAELI 1354



 Score = 34.7 bits (78), Expect(2) = 8e-41
 Identities = 16/36 (44%), Positives = 22/36 (61%)
 Frame = -1

Query: 583  DDIIITGSELSNLSTLICSLKKHFSLKDMGSLSHFL 476
            DDII+  S     + L+  L K F+LKD+G L +FL
Sbjct: 1135 DDIIVASSTEKATTALLKDLNKEFTLKDLGDLHYFL 1170


>emb|CAN73924.1| hypothetical protein VITISV_041509 [Vitis vinifera]
          Length = 1434

 Score =  157 bits (398), Expect(2) = 8e-41
 Identities = 79/158 (50%), Positives = 103/158 (65%)
 Frame = -2

Query: 474  KANMVDTNGIATPMITSTPLSRFEGQPTVDPTHYRRIVGALQYVTVTRPDIAYSVNKIIQ 295
            +  M  +    TP      LS+ +G    DP+ YRR VGALQYVT+TRPDIA++VNK  Q
Sbjct: 1114 RTQMETSKPAPTPGRLGRTLSQSDGMSLSDPSEYRRTVGALQYVTLTRPDIAFAVNKACQ 1173

Query: 294  YMHNPLDLHWKAVKRILRYLAGTIHYGLHLSPSADL*IRVYXXXXXXXXXXXRKSMSGFC 115
            +M  P D+HW AVKRILRYL GTIH GLH  P+A + ++ Y           R+S SG+C
Sbjct: 1174 FMAKPSDVHWMAVKRILRYLKGTIHLGLHFQPAASMELQGYSDADWASCPDDRRSTSGYC 1233

Query: 114  IFLGQNLISWSARKQPTVSRSSTEAEFRSLTHATSEVL 1
            +FLG NLISWS+ KQ  VS+SS E+E+R L   T+E++
Sbjct: 1234 VFLGSNLISWSSSKQRLVSKSSAESEYRGLVSLTAELV 1271



 Score = 36.6 bits (83), Expect(2) = 8e-41
 Identities = 17/36 (47%), Positives = 25/36 (69%)
 Frame = -1

Query: 583  DDIIITGSELSNLSTLICSLKKHFSLKDMGSLSHFL 476
            DDI++TGS    +S  I  L+  F+L+D+G LS+FL
Sbjct: 1054 DDILVTGSNPMLVSHFISYLRTKFALRDLGPLSYFL 1089


>emb|CAN79148.1| hypothetical protein VITISV_004343 [Vitis vinifera]
          Length = 1334

 Score =  157 bits (398), Expect(2) = 8e-41
 Identities = 79/158 (50%), Positives = 103/158 (65%)
 Frame = -2

Query: 474  KANMVDTNGIATPMITSTPLSRFEGQPTVDPTHYRRIVGALQYVTVTRPDIAYSVNKIIQ 295
            +  M  +    TP      LS+ +G    DP+ YRR VGALQYVT+TRPDIA++VNK  Q
Sbjct: 1114 RTQMETSKPAPTPGRLGRTLSQSDGMSLSDPSEYRRTVGALQYVTLTRPDIAFAVNKACQ 1173

Query: 294  YMHNPLDLHWKAVKRILRYLAGTIHYGLHLSPSADL*IRVYXXXXXXXXXXXRKSMSGFC 115
            +M  P D+HW AVKRILRYL GTIH GLH  P+A + ++ Y           R+S SG+C
Sbjct: 1174 FMAKPSDVHWMAVKRILRYLKGTIHLGLHFQPAASMELQGYSDADWASCPDDRRSTSGYC 1233

Query: 114  IFLGQNLISWSARKQPTVSRSSTEAEFRSLTHATSEVL 1
            +FLG NLISWS+ KQ  VS+SS E+E+R L   T+E++
Sbjct: 1234 VFLGSNLISWSSSKQRLVSKSSAESEYRGLVSLTAELV 1271



 Score = 36.6 bits (83), Expect(2) = 8e-41
 Identities = 17/36 (47%), Positives = 25/36 (69%)
 Frame = -1

Query: 583  DDIIITGSELSNLSTLICSLKKHFSLKDMGSLSHFL 476
            DDI++TGS    +S  I  L+  F+L+D+G LS+FL
Sbjct: 1054 DDILVTGSNPMLVSHFISYLRTKFALRDLGPLSYFL 1089


>emb|CAN63683.1| hypothetical protein VITISV_030301 [Vitis vinifera]
          Length = 1272

 Score =  157 bits (397), Expect(2) = 1e-40
 Identities = 82/160 (51%), Positives = 106/160 (66%), Gaps = 1/160 (0%)
 Frame = -2

Query: 477  LKANMVDTNGIA-TPMITSTPLSRFEGQPTVDPTHYRRIVGALQYVTVTRPDIAYSVNKI 301
            LK   ++T+  A TP      LS+ +G    DP  YRR VGALQYVT+TRPDIA++VNK 
Sbjct: 981  LKRTQMETSKPAPTPGRLGRTLSQSDGVSLSDPLEYRRTVGALQYVTLTRPDIAFAVNKA 1040

Query: 300  IQYMHNPLDLHWKAVKRILRYLAGTIHYGLHLSPSADL*IRVYXXXXXXXXXXXRKSMSG 121
             Q+M  P D+HW AVKRILRYL GTIH GLH  P+A + ++ Y           R+S SG
Sbjct: 1041 CQFMAKPSDVHWMAVKRILRYLKGTIHLGLHFQPAASMELQGYSDADWASCPDDRRSTSG 1100

Query: 120  FCIFLGQNLISWSARKQPTVSRSSTEAEFRSLTHATSEVL 1
            +C+FLG NLISWS+ KQ  VS+SS E+E+R L   T+E++
Sbjct: 1101 YCVFLGSNLISWSSSKQRLVSKSSAESEYRGLVSLTAELV 1140



 Score = 36.6 bits (83), Expect(2) = 1e-40
 Identities = 17/36 (47%), Positives = 25/36 (69%)
 Frame = -1

Query: 583  DDIIITGSELSNLSTLICSLKKHFSLKDMGSLSHFL 476
            DDI++TGS  + +S  I  L   F+L+D+G LS+FL
Sbjct: 923  DDILVTGSNPTLVSHFISYLSTKFALRDLGPLSYFL 958


>gb|ACV42639.1| gag/pol [Oryza sativa Japonica Group]
          Length = 1448

 Score =  159 bits (401), Expect(2) = 1e-40
 Identities = 82/160 (51%), Positives = 106/160 (66%), Gaps = 2/160 (1%)
 Frame = -2

Query: 474  KANMVDTNGIATPMITSTPLSRFEGQPTV--DPTHYRRIVGALQYVTVTRPDIAYSVNKI 301
            + NM +   ++TP+  S  L+ +EG P    D T YR IVGALQY+T+TRPDIAYSVNK+
Sbjct: 1195 RVNMSNCTPVSTPLSVSEKLTLYEGSPLGPNDATQYRSIVGALQYLTLTRPDIAYSVNKV 1254

Query: 300  IQYMHNPLDLHWKAVKRILRYLAGTIHYGLHLSPSADL*IRVYXXXXXXXXXXXRKSMSG 121
             Q++H P   HW AVKRILRYL      GLH+  SA   +  Y           RKS  G
Sbjct: 1255 CQFLHAPTTSHWIAVKRILRYLNQCTSPGLHVHKSASTLVHGYSDADGAGSIDDRKSTGG 1314

Query: 120  FCIFLGQNLISWSARKQPTVSRSSTEAEFRSLTHATSEVL 1
            F +FLG NL+SWSARKQPTVSRSSTEAE++++ + T+E++
Sbjct: 1315 FAVFLGSNLVSWSARKQPTVSRSSTEAEYKAVANTTAELI 1354



 Score = 34.7 bits (78), Expect(2) = 1e-40
 Identities = 16/36 (44%), Positives = 22/36 (61%)
 Frame = -1

Query: 583  DDIIITGSELSNLSTLICSLKKHFSLKDMGSLSHFL 476
            DDII+  S     + L+  L K F+LKD+G L +FL
Sbjct: 1135 DDIIVASSTEKATTALLKDLNKEFTLKDLGDLHYFL 1170


>emb|CAN67546.1| hypothetical protein VITISV_027734 [Vitis vinifera]
          Length = 1635

 Score =  154 bits (390), Expect(2) = 2e-40
 Identities = 76/158 (48%), Positives = 103/158 (65%)
 Frame = -2

Query: 474  KANMVDTNGIATPMITSTPLSRFEGQPTVDPTHYRRIVGALQYVTVTRPDIAYSVNKIIQ 295
            +  M DT    TP +    LS+F+G P  + T YR +VGALQY+T+TRPDIA++VNK  Q
Sbjct: 937  RTEMFDTKPAKTPGVVGKNLSKFDGDPMDEVTQYRSVVGALQYLTITRPDIAFAVNKACQ 996

Query: 294  YMHNPLDLHWKAVKRILRYLAGTIHYGLHLSPSADL*IRVYXXXXXXXXXXXRKSMSGFC 115
            +M  P   HW ++KRILRYL GT+  GL LSPS +L I  +           R+S SG+ 
Sbjct: 997  FMQQPTSAHWLSIKRILRYLKGTMQDGLLLSPSTNLTIEXFSDANWGAQPDDRRSSSGYL 1056

Query: 114  IFLGQNLISWSARKQPTVSRSSTEAEFRSLTHATSEVL 1
            ++LG NL+SWS+ KQ  VSRSS E+E+R L  AT+E++
Sbjct: 1057 VYLGGNLVSWSSTKQKVVSRSSAESEYRGLALATAEII 1094



 Score = 38.5 bits (88), Expect(2) = 2e-40
 Identities = 18/36 (50%), Positives = 25/36 (69%)
 Frame = -1

Query: 583 DDIIITGSELSNLSTLICSLKKHFSLKDMGSLSHFL 476
           DDIII G   + +S+LI  L   F+L+D+G LS+FL
Sbjct: 877 DDIIIXGCSSTQISSLIXKLDSIFTLRDLGQLSYFL 912


>emb|CAN78451.1| hypothetical protein VITISV_005945 [Vitis vinifera]
          Length = 773

 Score =  155 bits (393), Expect(2) = 2e-40
 Identities = 79/158 (50%), Positives = 102/158 (64%)
 Frame = -2

Query: 474 KANMVDTNGIATPMITSTPLSRFEGQPTVDPTHYRRIVGALQYVTVTRPDIAYSVNKIIQ 295
           +  M  +    TP      LS+ +G    DP+ YRR VGALQYVT+TRPDIA++VNK  Q
Sbjct: 461 RTQMETSKPAPTPGRLGRTLSQSDGVSLSDPSEYRRTVGALQYVTLTRPDIAFAVNKACQ 520

Query: 294 YMHNPLDLHWKAVKRILRYLAGTIHYGLHLSPSADL*IRVYXXXXXXXXXXXRKSMSGFC 115
           +M  P D+HW AVKRILRYL GTIH GLH  P+A +  + Y           R+S SG+C
Sbjct: 521 FMAKPSDVHWMAVKRILRYLKGTIHLGLHFQPAASMEXQGYSDADWASCPDDRRSTSGYC 580

Query: 114 IFLGQNLISWSARKQPTVSRSSTEAEFRSLTHATSEVL 1
           +FLG NLISWS+ KQ  VS+SS E+E+R L   T+E++
Sbjct: 581 VFLGSNLISWSSSKQRLVSKSSAESEYRGLVSLTAELV 618



 Score = 37.4 bits (85), Expect(2) = 2e-40
 Identities = 17/36 (47%), Positives = 26/36 (72%)
 Frame = -1

Query: 583 DDIIITGSELSNLSTLICSLKKHFSLKDMGSLSHFL 476
           DDI++TGS  + +S  I  L+  F+L+D+G LS+FL
Sbjct: 401 DDILVTGSNPTLVSHFISYLRTKFALRDLGPLSYFL 436


>gb|AAK02020.2|AC074283_1 Putative gag-pol polyprotein [Oryza sativa]
            gi|31430072|gb|AAP52036.1| retrotransposon protein,
            putative, Ty1-copia subclass [Oryza sativa Japonica
            Group]
          Length = 1058

 Score =  154 bits (389), Expect(2) = 2e-40
 Identities = 75/160 (46%), Positives = 107/160 (66%), Gaps = 2/160 (1%)
 Frame = -2

Query: 474  KANMVDTNGIATPMITSTPLSRFEGQPT--VDPTHYRRIVGALQYVTVTRPDIAYSVNKI 301
            + +M +   + TP+ T   LS +EG+     D T YR +VGALQY+T+TRPDI++SVNK+
Sbjct: 798  RVSMENCKSVGTPLSTVEKLSAYEGEKLGEKDATQYRSVVGALQYLTLTRPDISFSVNKV 857

Query: 300  IQYMHNPLDLHWKAVKRILRYLAGTIHYGLHLSPSADL*IRVYXXXXXXXXXXXRKSMSG 121
             Q++ NP  +HW  VKRILRY+ GT+  GL +  S+   +  Y           ++S  G
Sbjct: 858  CQFLQNPTTVHWATVKRILRYVKGTLGLGLKVEKSSSNIVSAYSDADWADCLDDKRSTGG 917

Query: 120  FCIFLGQNLISWSARKQPTVSRSSTEAEFRSLTHATSEVL 1
            F +FLG NLISW+ARKQ TVSRSSTEAE+++L +AT+E++
Sbjct: 918  FAVFLGSNLISWNARKQATVSRSSTEAEYKALANATAEIM 957



 Score = 38.5 bits (88), Expect(2) = 2e-40
 Identities = 17/36 (47%), Positives = 25/36 (69%)
 Frame = -1

Query: 583 DDIIITGSELSNLSTLICSLKKHFSLKDMGSLSHFL 476
           DDII+  S    ++ L+ SL+K F+LKD+G L +FL
Sbjct: 738 DDIIVASSSAQAVTALLRSLEKEFALKDLGELHYFL 773