BLASTX nr result

ID: Perilla23_contig00027962 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Perilla23_contig00027962
         (338 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011080314.1| PREDICTED: putative E3 ubiquitin-protein lig...    76   9e-12
emb|CDP11068.1| unnamed protein product [Coffea canephora]             59   2e-06

>ref|XP_011080314.1| PREDICTED: putative E3 ubiquitin-protein ligase LIN-1 [Sesamum
           indicum]
          Length = 1120

 Score = 76.3 bits (186), Expect = 9e-12
 Identities = 42/94 (44%), Positives = 58/94 (61%)
 Frame = -2

Query: 283 EERERYISDIGMDSKKEKHNSFKHTYPLAEQRNSTNLRSVKQPQSYEGRSNKVPESGNNF 104
           EE ER+ S+I +D K+ + NS K     +E     N RS+KQPQS + R   +P +  N 
Sbjct: 161 EESERHGSNIVIDDKETRKNSLKQPCS-SESFKGNNRRSMKQPQSSDNRPTGMPVNDKNL 219

Query: 103 GESRSIRQNKIDEVQDVPALDEAAIKAVISIFSG 2
            +SRSIRQ K ++    PALDE A+KA+ISI +G
Sbjct: 220 DDSRSIRQPKFEQAIATPALDEVAVKAIISILNG 253


>emb|CDP11068.1| unnamed protein product [Coffea canephora]
          Length = 1103

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 38/115 (33%), Positives = 65/115 (56%), Gaps = 3/115 (2%)
 Frame = -2

Query: 337 SNNAYNHNKNEGKHSAGYEERE---RYISDIGMDSKKEKHNSFKHTYPLAEQRNSTNLRS 167
           SN+ Y+  + + K+ A  E+ E   + I       KK+ HNS K T  + +  N T+ +S
Sbjct: 120 SNDVYSPEERDKKYGARSEKMESPRQIIEKNKRVDKKKGHNSNK-TSTVHKSLNETSRKS 178

Query: 166 VKQPQSYEGRSNKVPESGNNFGESRSIRQNKIDEVQDVPALDEAAIKAVISIFSG 2
            K+ ++  GRSN+  +   +  +S+S R+  I++    PALD AA++A+ISI +G
Sbjct: 179 RKKSETSSGRSNRSSQQSKSLKDSKSRRKPDIEQSIATPALDVAAVQALISILNG 233


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