BLASTX nr result

ID: Perilla23_contig00027961 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Perilla23_contig00027961
         (396 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_012837235.1| PREDICTED: probable alanine--tRNA ligase, ch...    82   2e-13
ref|XP_011088677.1| PREDICTED: probable alanine--tRNA ligase, ch...    79   2e-12
ref|XP_011088675.1| PREDICTED: probable alanine--tRNA ligase, ch...    71   4e-10

>ref|XP_012837235.1| PREDICTED: probable alanine--tRNA ligase, chloroplastic
           [Erythranthe guttatus]
          Length = 989

 Score = 82.0 bits (201), Expect = 2e-13
 Identities = 40/67 (59%), Positives = 46/67 (68%)
 Frame = -2

Query: 206 MASLKPPFSLQTTHVAKFVLPFPTSRFRYPFTTGSRDYRGFTLQSLALVDRCLLSYRGSH 27
           M S+K PFS+QT H A F+L FP SRFR PF  G+RDYRGF +Q+L  VD C LSY  SH
Sbjct: 1   MGSVKLPFSVQTRHGANFLLSFPISRFRSPFPAGARDYRGFIIQTLPSVDPCRLSYTNSH 60

Query: 26  AKGSRLF 6
            K S  F
Sbjct: 61  DKVSHFF 67


>ref|XP_011088677.1| PREDICTED: probable alanine--tRNA ligase, chloroplastic isoform X2
           [Sesamum indicum]
          Length = 989

 Score = 78.6 bits (192), Expect = 2e-12
 Identities = 41/67 (61%), Positives = 47/67 (70%)
 Frame = -2

Query: 206 MASLKPPFSLQTTHVAKFVLPFPTSRFRYPFTTGSRDYRGFTLQSLALVDRCLLSYRGSH 27
           M S K P SL + H  KFVLPFP SR   PF TG+RD+RGF +Q+LALV    LSYRGSH
Sbjct: 1   MGSFKLPVSLNSRHGGKFVLPFPISRSFSPFITGTRDHRGFIIQTLALVGPRRLSYRGSH 60

Query: 26  AKGSRLF 6
           AK S+ F
Sbjct: 61  AKRSQHF 67


>ref|XP_011088675.1| PREDICTED: probable alanine--tRNA ligase, chloroplastic isoform X1
           [Sesamum indicum] gi|747082681|ref|XP_011088676.1|
           PREDICTED: probable alanine--tRNA ligase, chloroplastic
           isoform X1 [Sesamum indicum]
          Length = 999

 Score = 70.9 bits (172), Expect = 4e-10
 Identities = 41/77 (53%), Positives = 47/77 (61%), Gaps = 10/77 (12%)
 Frame = -2

Query: 206 MASLKPPFSLQTTHVAKFVLPFPTSRFRYPF----------TTGSRDYRGFTLQSLALVD 57
           M S K P SL + H  KFVLPFP SR   PF           TG+RD+RGF +Q+LALV 
Sbjct: 1   MGSFKLPVSLNSRHGGKFVLPFPISRSFSPFITGCDNSCDPNTGTRDHRGFIIQTLALVG 60

Query: 56  RCLLSYRGSHAKGSRLF 6
              LSYRGSHAK S+ F
Sbjct: 61  PRRLSYRGSHAKRSQHF 77


Top