BLASTX nr result

ID: Perilla23_contig00025237 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Perilla23_contig00025237
         (467 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011086448.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    78   2e-12
ref|XP_012847594.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    77   5e-12

>ref|XP_011086448.1| PREDICTED: DEAD-box ATP-dependent RNA helicase ISE2, chloroplastic
           [Sesamum indicum]
          Length = 1171

 Score = 78.2 bits (191), Expect = 2e-12
 Identities = 56/151 (37%), Positives = 68/151 (45%), Gaps = 13/151 (8%)
 Frame = -2

Query: 415 MKSFSIHSSLSLTTCTVHTPTRLSLFTLFRPSLHFQSLQFFNSTGYSRFTAPCKFPNSVF 236
           M +FS+ SSLS +  TVH+  +LS   L +P L FQ   FF++  +S F A  KFPNS+F
Sbjct: 1   MTAFSVLSSLSYSPFTVHSTDKLSPLPLLKPFLRFQ---FFHARNHSHFAAAYKFPNSIF 57

Query: 235 PVGSSSQLFXXXXXXXXXXXXXXXXXXXXXXDTVS----AXXXXXXXXXXXXXDVLE--- 77
           P+ SSSQL                         VS                   V E   
Sbjct: 58  PIESSSQLSEDENEAESDEEDDEDDVAAEEYGAVSGEIGGDSEGEEEEEEDDDGVSEDSD 117

Query: 76  ------GVGSGQPRYEEFKWQRVERIRNEVR 2
                 GV     R+EE KWQRVERIRNEVR
Sbjct: 118 GIGEKFGVSGNDSRFEELKWQRVERIRNEVR 148


>ref|XP_012847594.1| PREDICTED: DEAD-box ATP-dependent RNA helicase ISE2, chloroplastic
           [Erythranthe guttatus] gi|604316469|gb|EYU28661.1|
           hypothetical protein MIMGU_mgv1a000418mg [Erythranthe
           guttata]
          Length = 1168

 Score = 77.0 bits (188), Expect = 5e-12
 Identities = 58/149 (38%), Positives = 70/149 (46%), Gaps = 11/149 (7%)
 Frame = -2

Query: 415 MKSFSI-HSSLSLTTCTVHTPTRLSLFTLFRPSLHFQSLQFFNSTGYSRFTAPCKFPNSV 239
           M +FSI HS  +     +H   +L  F + RP L F+ LQFF+   +SRFTAP KFPNSV
Sbjct: 1   MAAFSISHSPFT----RIHRINKLPPFPVLRPFLQFRPLQFFHFNNHSRFTAPYKFPNSV 56

Query: 238 FPVGSSSQL--------FXXXXXXXXXXXXXXXXXXXXXXDTVSAXXXXXXXXXXXXXDV 83
           FPV SSSQL                               D+                 +
Sbjct: 57  FPVESSSQLSDDENEADSDEEEDDDVAAEEYDVVSGEIGEDSEQDEDEENDDVSEESGGI 116

Query: 82  LEGVGSG--QPRYEEFKWQRVERIRNEVR 2
            E +G G  + RYEEFKWQRVERI NEVR
Sbjct: 117 GERIGVGGRESRYEEFKWQRVERIINEVR 145


Top