BLASTX nr result
ID: Perilla23_contig00023292
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Perilla23_contig00023292
(851 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011079992.1| PREDICTED: DNA-directed RNA polymerase III s... 251 6e-64
ref|XP_002271507.2| PREDICTED: DNA-directed RNA polymerase III s... 236 2e-59
ref|XP_002281971.1| PREDICTED: DNA-directed RNA polymerase III s... 233 1e-58
ref|XP_009784879.1| PREDICTED: DNA-directed RNA polymerase III s... 219 2e-54
ref|XP_006343568.1| PREDICTED: DNA-directed RNA polymerase III s... 218 3e-54
emb|CDP03695.1| unnamed protein product [Coffea canephora] 218 4e-54
ref|XP_010278155.1| PREDICTED: DNA-directed RNA polymerase III s... 218 6e-54
ref|XP_012831638.1| PREDICTED: DNA-directed RNA polymerase III s... 217 8e-54
ref|XP_004242644.1| PREDICTED: DNA-directed RNA polymerase III s... 216 1e-53
ref|XP_010265332.1| PREDICTED: DNA-directed RNA polymerase III s... 216 2e-53
ref|XP_009600427.1| PREDICTED: DNA-directed RNA polymerase III s... 216 2e-53
ref|XP_010087136.1| DNA-directed RNA polymerase III subunit rpc8... 211 5e-52
ref|XP_002520987.1| DNA-directed RNA polymerase III 25 kD polype... 211 5e-52
ref|XP_010323226.1| PREDICTED: DNA-directed RNA polymerase III s... 210 1e-51
ref|XP_012092104.1| PREDICTED: DNA-directed RNA polymerase III s... 209 2e-51
ref|XP_007050414.1| RNA polymerase Rpb7 N-terminal domain-contai... 209 2e-51
ref|XP_008365292.1| PREDICTED: DNA-directed RNA polymerase III s... 207 8e-51
ref|XP_012441685.1| PREDICTED: DNA-directed RNA polymerase III s... 206 1e-50
gb|KHG16616.1| DNA-directed RNA polymerase III subunit RPC8 [Gos... 206 1e-50
ref|XP_004135978.1| PREDICTED: DNA-directed RNA polymerase III s... 206 2e-50
>ref|XP_011079992.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC8 isoform X1
[Sesamum indicum]
Length = 203
Score = 251 bits (640), Expect = 6e-64
Identities = 126/197 (63%), Positives = 154/197 (78%), Gaps = 7/197 (3%)
Frame = -1
Query: 713 MFFLSEIEHTXXXXXXXXXXXLNDAIKGELDSIFLDKVIDKLGLCVSVYDIRSIDGGFIF 534
MFFLSEIEHT LN+AIKGELDS+FLDKVI+KLGLCVSVYDIRSIDGGFIF
Sbjct: 1 MFFLSEIEHTLRLPPYLLNRPLNEAIKGELDSLFLDKVIEKLGLCVSVYDIRSIDGGFIF 60
Query: 533 PSDGASTYTVKFRLVMFRPFVGEVILAQIKQSREDGIQLTLGFFDDIYIPVHLLLSETRC 354
P DGASTYTV+FRLVMFRPFVGEVI A++K+S +DG++L+LGFFDDIY+PV LL S
Sbjct: 61 PGDGASTYTVRFRLVMFRPFVGEVISARLKESSKDGLRLSLGFFDDIYVPVPLLASPNHS 120
Query: 353 EHVPGNK--VVWIWKYQETDYHMIEEDEVRFKVHSVSYPPVPKDHGQN-----LEQKDVK 195
E P +K + W+W+Y+ +Y + DE+RF+VH+VSYPPVP + G++ EQKD K
Sbjct: 121 EPDPEHKNGIRWVWEYEGENYPIDGTDEIRFRVHNVSYPPVPLEQGKDSDEKESEQKDSK 180
Query: 194 PFSPMVITGSIDLAGLG 144
PF+PMV+TGS+D GLG
Sbjct: 181 PFAPMVVTGSLDADGLG 197
>ref|XP_002271507.2| PREDICTED: DNA-directed RNA polymerase III subunit RPC8 [Vitis
vinifera] gi|296086693|emb|CBI32328.3| unnamed protein
product [Vitis vinifera]
Length = 192
Score = 236 bits (602), Expect = 2e-59
Identities = 118/192 (61%), Positives = 146/192 (76%), Gaps = 2/192 (1%)
Frame = -1
Query: 713 MFFLSEIEHTXXXXXXXXXXXLNDAIKGELDSIFLDKVIDKLGLCVSVYDIRSIDGGFIF 534
MFFLS IEHT LN+AIKGEL+S+FLDKV+ LGLC+SVYDIRSIDGGF+F
Sbjct: 1 MFFLSLIEHTLRLPPHLLDLPLNEAIKGELESLFLDKVLANLGLCISVYDIRSIDGGFVF 60
Query: 533 PSDGASTYTVKFRLVMFRPFVGEVILAQIKQSREDGIQLTLGFFDDIYIPVHLLLSETRC 354
P DGASTYTV+FRLVMFRPFVGE+I A++K+S +G+QL+LGFFDDIYIPVHL+ + C
Sbjct: 61 PGDGASTYTVEFRLVMFRPFVGEIITAKLKESDANGLQLSLGFFDDIYIPVHLMPNPCHC 120
Query: 353 EHVPGNK--VVWIWKYQETDYHMIEEDEVRFKVHSVSYPPVPKDHGQNLEQKDVKPFSPM 180
E P NK V+WIW YQE + + DE+RF+V SVSYPP+P + + K+ KPF+PM
Sbjct: 121 EPDPENKSQVIWIWDYQEQKFPIDGLDEIRFQVQSVSYPPIPVE-----QPKESKPFAPM 175
Query: 179 VITGSIDLAGLG 144
+I GS+D GLG
Sbjct: 176 MIMGSLDYDGLG 187
>ref|XP_002281971.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC8 [Vitis
vinifera] gi|297735498|emb|CBI17938.3| unnamed protein
product [Vitis vinifera]
Length = 192
Score = 233 bits (594), Expect = 1e-58
Identities = 117/192 (60%), Positives = 145/192 (75%), Gaps = 2/192 (1%)
Frame = -1
Query: 713 MFFLSEIEHTXXXXXXXXXXXLNDAIKGELDSIFLDKVIDKLGLCVSVYDIRSIDGGFIF 534
MF+LS IEHT LN+AIKGEL+S+FLDKVI LGLC+SVYDIRSIDGGF+F
Sbjct: 1 MFYLSLIEHTLRLPPHLLDLPLNEAIKGELESLFLDKVIANLGLCISVYDIRSIDGGFVF 60
Query: 533 PSDGASTYTVKFRLVMFRPFVGEVILAQIKQSREDGIQLTLGFFDDIYIPVHLLLSETRC 354
P DGASTYTV+FRLVMFRPFVGE+I A++K+S +G++L+LGFFDDIYIPVHL+ + C
Sbjct: 61 PGDGASTYTVEFRLVMFRPFVGEIITAKLKESDANGLRLSLGFFDDIYIPVHLMPNPCHC 120
Query: 353 EHVPGNK--VVWIWKYQETDYHMIEEDEVRFKVHSVSYPPVPKDHGQNLEQKDVKPFSPM 180
E P K V+WIW YQE + + DE+RF+V SVSYPP+P + + K+ KPF+PM
Sbjct: 121 EPNPEKKGQVIWIWDYQEQKFPIDGIDEIRFQVQSVSYPPIPVE-----QPKESKPFAPM 175
Query: 179 VITGSIDLAGLG 144
VI GS+D GLG
Sbjct: 176 VIMGSLDYDGLG 187
>ref|XP_009784879.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC8 [Nicotiana
sylvestris] gi|698474891|ref|XP_009784880.1| PREDICTED:
DNA-directed RNA polymerase III subunit RPC8 [Nicotiana
sylvestris]
Length = 194
Score = 219 bits (558), Expect = 2e-54
Identities = 112/193 (58%), Positives = 147/193 (76%), Gaps = 3/193 (1%)
Frame = -1
Query: 713 MFFLSEIEHTXXXXXXXXXXXLNDAIKGELDSIFLDKVIDKLGLCVSVYDIRSIDGGFIF 534
MF+LSEIEHT LN++I+GEL+ +F+DKVI LGLCVSVYDIRSIDGGFI+
Sbjct: 1 MFYLSEIEHTLRLPPHLLSLPLNESIRGELEGLFVDKVIANLGLCVSVYDIRSIDGGFIY 60
Query: 533 PSDGASTYTVKFRLVMFRPFVGEVILAQIKQSREDGIQLTLGFFDDIYIPVHLLLSETRC 354
+GASTYTVKFRL++FRPFVGEVI+A++K+S +G++L+LGFF+DIY+P L+ S +R
Sbjct: 61 AGEGASTYTVKFRLIVFRPFVGEVIVAKLKESNTEGLRLSLGFFNDIYVPPPLMPSPSRS 120
Query: 353 EHVPGNK--VVWIWKYQETDYHMIE-EDEVRFKVHSVSYPPVPKDHGQNLEQKDVKPFSP 183
E P NK V WIW+++ D + I+ DE+RF+VHSVSYP VP + ++KD KPF+P
Sbjct: 121 EPDPENKNQVRWIWQFEGQDEYPIDGVDEIRFQVHSVSYPSVPLE-----QEKDSKPFAP 175
Query: 182 MVITGSIDLAGLG 144
MVI GS+D GLG
Sbjct: 176 MVIKGSLDADGLG 188
>ref|XP_006343568.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC8-like
[Solanum tuberosum]
Length = 193
Score = 218 bits (556), Expect = 3e-54
Identities = 111/192 (57%), Positives = 141/192 (73%), Gaps = 2/192 (1%)
Frame = -1
Query: 713 MFFLSEIEHTXXXXXXXXXXXLNDAIKGELDSIFLDKVIDKLGLCVSVYDIRSIDGGFIF 534
MF+LSEIEH LN+AIKGEL+ +F+DKVI LGL +S+YDIRSID GFI+
Sbjct: 1 MFYLSEIEHKLRLPPHLLNLPLNEAIKGELEGLFVDKVIANLGLIISIYDIRSIDDGFIY 60
Query: 533 PSDGASTYTVKFRLVMFRPFVGEVILAQIKQSREDGIQLTLGFFDDIYIPVHLLLSETRC 354
PS+GASTYTVKFRLV+FRPFVGEVI A++K+S+ +G++L+LGFFDDIY+P LL +R
Sbjct: 61 PSEGASTYTVKFRLVVFRPFVGEVITAKLKESKAEGLRLSLGFFDDIYVPAPLLPDPSRS 120
Query: 353 EHVPGNK--VVWIWKYQETDYHMIEEDEVRFKVHSVSYPPVPKDHGQNLEQKDVKPFSPM 180
P NK V WIWK+ E DY + DE+RF+VH+VSYP +P + + KD PF+PM
Sbjct: 121 APDPENKNQVRWIWKFDELDYPIDGVDEIRFQVHNVSYPSMPLE-----QDKDSNPFAPM 175
Query: 179 VITGSIDLAGLG 144
VI GS+D GLG
Sbjct: 176 VIKGSLDADGLG 187
>emb|CDP03695.1| unnamed protein product [Coffea canephora]
Length = 193
Score = 218 bits (555), Expect = 4e-54
Identities = 116/193 (60%), Positives = 142/193 (73%), Gaps = 3/193 (1%)
Frame = -1
Query: 713 MFFLSEIEHTXXXXXXXXXXXLNDAIKGELDSIFLDKVIDKLGLCVSVYDIRSIDGGFIF 534
MF LSEIEHT L +AIKGEL+ +FLDKVI KLGLC+SVYDIRSIDGGFIF
Sbjct: 1 MFCLSEIEHTLRLPPHLLNLPLAEAIKGELEGLFLDKVIAKLGLCISVYDIRSIDGGFIF 60
Query: 533 PSDGASTYTVKFRLVMFRPFVGEVILAQIKQSREDGIQLTLGFFDDIYIPVHLLLSETRC 354
P DGASTYTV+FRL+MFRPF+GEVI A++K+S G++L+LGFFDDIYIP LL S +
Sbjct: 61 PGDGASTYTVRFRLLMFRPFLGEVISARLKESSSTGLRLSLGFFDDIYIPRALLPSPSHD 120
Query: 353 EHVP--GNKVVWIWKYQETDYHMIEEDEVRFKVHSVSYPPVPKDHGQNLEQKD-VKPFSP 183
E P N+V WIW++ E +Y + DE+RF+VHS+ YP +P LEQ D KPF+P
Sbjct: 121 EPDPEDKNQVRWIWEFNEQNYPIDGMDEIRFRVHSIQYPSLP------LEQDDGSKPFAP 174
Query: 182 MVITGSIDLAGLG 144
M+ITGS+D GLG
Sbjct: 175 MLITGSLDADGLG 187
>ref|XP_010278155.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC8-like
[Nelumbo nucifera] gi|720071765|ref|XP_010278156.1|
PREDICTED: DNA-directed RNA polymerase III subunit
RPC8-like [Nelumbo nucifera]
Length = 193
Score = 218 bits (554), Expect = 6e-54
Identities = 107/192 (55%), Positives = 143/192 (74%), Gaps = 2/192 (1%)
Frame = -1
Query: 713 MFFLSEIEHTXXXXXXXXXXXLNDAIKGELDSIFLDKVIDKLGLCVSVYDIRSIDGGFIF 534
MFFLS IEHT L++AIKGEL+++FLDKVI LGLC+S+YDIR I GFI+
Sbjct: 1 MFFLSLIEHTLCLPPHLLNLPLDEAIKGELETLFLDKVIPNLGLCISIYDIRDIKDGFIY 60
Query: 533 PSDGASTYTVKFRLVMFRPFVGEVILAQIKQSREDGIQLTLGFFDDIYIPVHLLLSETRC 354
P DGASTYTV+FRLVMFRPFVGE+I+ ++K S +G++L++ FFDDI+IPVHLL + +
Sbjct: 61 PGDGASTYTVQFRLVMFRPFVGEIIVGKLKSSDANGLKLSISFFDDIHIPVHLLPNPSSL 120
Query: 353 EHVPGNK--VVWIWKYQETDYHMIEEDEVRFKVHSVSYPPVPKDHGQNLEQKDVKPFSPM 180
P NK VW W++Q+ Y + +DE+RF+VHS+SYPP+P + ++K+ KPF+PM
Sbjct: 121 MPNPENKHQGVWSWEFQDEQYPIDGKDEIRFRVHSISYPPIPIE-----QEKEAKPFAPM 175
Query: 179 VITGSIDLAGLG 144
VITGS+D GLG
Sbjct: 176 VITGSLDYDGLG 187
>ref|XP_012831638.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC8
[Erythranthe guttatus] gi|604348349|gb|EYU46504.1|
hypothetical protein MIMGU_mgv1a014157mg [Erythranthe
guttata]
Length = 199
Score = 217 bits (553), Expect = 8e-54
Identities = 114/194 (58%), Positives = 139/194 (71%), Gaps = 4/194 (2%)
Frame = -1
Query: 713 MFFLSEIEHTXXXXXXXXXXXLNDAIKGELDSIFLDKVIDKLGLCVSVYDIRSIDGGFIF 534
MFFLSE+EH+ L+ AIKGEL+S+FLD VIDKLGLC+SVYDIRSIDGGFIF
Sbjct: 1 MFFLSELEHSLRLPPHLLNQPLDKAIKGELESLFLDTVIDKLGLCISVYDIRSIDGGFIF 60
Query: 533 PSDGASTYTVKFRLVMFRPFVGEVILAQIKQSREDGIQLTLGFFDDIYIPVHLLLSETRC 354
P GASTYTVKFRLVMFRPF+GEVI A++K+S G++L+LGFFDDIY+ V LL +
Sbjct: 61 PGHGASTYTVKFRLVMFRPFLGEVISARLKESTTSGLRLSLGFFDDIYVYVPLLPAPNDY 120
Query: 353 EHVPGNK--VVWIWKYQETDYHMIEEDEVRFKVHSVSYPPVPKDHG--QNLEQKDVKPFS 186
P K V+W W Y + DE+RFKVHSV+Y P+P + G + E+KD KPF+
Sbjct: 121 APDPSRKDGVIWSWNYHADPLTIDWTDEIRFKVHSVNYHPIPVEQGDDDDPEKKDSKPFA 180
Query: 185 PMVITGSIDLAGLG 144
PMV+ GSID GLG
Sbjct: 181 PMVVIGSIDDDGLG 194
>ref|XP_004242644.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC8 isoform X2
[Solanum lycopersicum]
Length = 193
Score = 216 bits (551), Expect = 1e-53
Identities = 110/192 (57%), Positives = 141/192 (73%), Gaps = 2/192 (1%)
Frame = -1
Query: 713 MFFLSEIEHTXXXXXXXXXXXLNDAIKGELDSIFLDKVIDKLGLCVSVYDIRSIDGGFIF 534
MF+LS +EHT LN+AIKGEL+ +F+DKVI LGL +S+YDIRS+D GFI+
Sbjct: 1 MFYLSVLEHTLRLPPHLLNLPLNEAIKGELEGLFVDKVIANLGLGISIYDIRSVDDGFIY 60
Query: 533 PSDGASTYTVKFRLVMFRPFVGEVILAQIKQSREDGIQLTLGFFDDIYIPVHLLLSETRC 354
PS+GASTY VKFRLV+FRPFVGEVI A++K+S +G++L+LGFFDDIY+P LL +R
Sbjct: 61 PSEGASTYKVKFRLVVFRPFVGEVISAKLKESNAEGLRLSLGFFDDIYVPAPLLPDPSRS 120
Query: 353 EHVPGNK--VVWIWKYQETDYHMIEEDEVRFKVHSVSYPPVPKDHGQNLEQKDVKPFSPM 180
E P NK V WIWK+ E DY + DE+RF+VH+VSYP +P + + KD KPF+PM
Sbjct: 121 EPDPENKNQVRWIWKFDELDYPIDGIDEIRFQVHNVSYPSMPLE-----QDKDSKPFAPM 175
Query: 179 VITGSIDLAGLG 144
VI GS+D GLG
Sbjct: 176 VIKGSLDADGLG 187
>ref|XP_010265332.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC8-like
[Nelumbo nucifera] gi|720029819|ref|XP_010265333.1|
PREDICTED: DNA-directed RNA polymerase III subunit
RPC8-like [Nelumbo nucifera]
gi|720029822|ref|XP_010265334.1| PREDICTED: DNA-directed
RNA polymerase III subunit RPC8-like [Nelumbo nucifera]
gi|720029825|ref|XP_010265335.1| PREDICTED: DNA-directed
RNA polymerase III subunit RPC8-like [Nelumbo nucifera]
Length = 193
Score = 216 bits (550), Expect = 2e-53
Identities = 105/192 (54%), Positives = 142/192 (73%), Gaps = 2/192 (1%)
Frame = -1
Query: 713 MFFLSEIEHTXXXXXXXXXXXLNDAIKGELDSIFLDKVIDKLGLCVSVYDIRSIDGGFIF 534
MFFLS IEHT L++AIKGEL+++FLDKVI LGLC+S+YDI I GFI+
Sbjct: 1 MFFLSLIEHTLRLPPHLLKLPLDEAIKGELEALFLDKVIPNLGLCISIYDIGDIKDGFIY 60
Query: 533 PSDGASTYTVKFRLVMFRPFVGEVILAQIKQSREDGIQLTLGFFDDIYIPVHLLLSETRC 354
P DGASTYTV+FRL+MFRPFVGE+I+ ++K S +G+ L++GFFDDI+IPVHLL + +
Sbjct: 61 PGDGASTYTVQFRLIMFRPFVGEIIVGKLKSSDANGLNLSVGFFDDIHIPVHLLPNPSSL 120
Query: 353 EHVPGNK--VVWIWKYQETDYHMIEEDEVRFKVHSVSYPPVPKDHGQNLEQKDVKPFSPM 180
P NK +W W++Q+ Y + +DE+RF+VHS+SYPP+P + ++K+ KPF+PM
Sbjct: 121 TLDPENKHEGIWTWEFQDEQYPIDGKDEIRFRVHSISYPPIPIE-----QEKEAKPFAPM 175
Query: 179 VITGSIDLAGLG 144
VITGS+D GLG
Sbjct: 176 VITGSLDYDGLG 187
>ref|XP_009600427.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC8 [Nicotiana
tomentosiformis]
Length = 194
Score = 216 bits (550), Expect = 2e-53
Identities = 110/193 (56%), Positives = 145/193 (75%), Gaps = 3/193 (1%)
Frame = -1
Query: 713 MFFLSEIEHTXXXXXXXXXXXLNDAIKGELDSIFLDKVIDKLGLCVSVYDIRSIDGGFIF 534
MF+LSEIEHT LN++I+GEL+ +F+DKVI LGLC+SVYDIRSIDGGFI+
Sbjct: 1 MFYLSEIEHTLRLPPHLLSLPLNESIRGELEGLFVDKVIANLGLCISVYDIRSIDGGFIY 60
Query: 533 PSDGASTYTVKFRLVMFRPFVGEVILAQIKQSREDGIQLTLGFFDDIYIPVHLLLSETRC 354
+GASTYTVKFRL++FRPFVGEVI A++K+S +G++L+LGFF+DIY+P L+ S +R
Sbjct: 61 AGEGASTYTVKFRLIVFRPFVGEVIAAKLKESNAEGLRLSLGFFNDIYVPPPLMPSPSRS 120
Query: 353 EHVPGNK--VVWIWKYQETDYHMIE-EDEVRFKVHSVSYPPVPKDHGQNLEQKDVKPFSP 183
E P NK V WIW+++ D + I+ DE+RF+VHSVSYP P + ++KD KPF+P
Sbjct: 121 ELDPENKNQVRWIWQFEGQDEYPIDGVDEIRFQVHSVSYPSAPLE-----QEKDSKPFAP 175
Query: 182 MVITGSIDLAGLG 144
MVI GS+D GLG
Sbjct: 176 MVIKGSLDADGLG 188
>ref|XP_010087136.1| DNA-directed RNA polymerase III subunit rpc8 [Morus notabilis]
gi|587835807|gb|EXB26576.1| DNA-directed RNA polymerase
III subunit rpc8 [Morus notabilis]
Length = 200
Score = 211 bits (537), Expect = 5e-52
Identities = 106/192 (55%), Positives = 139/192 (72%), Gaps = 2/192 (1%)
Frame = -1
Query: 713 MFFLSEIEHTXXXXXXXXXXXLNDAIKGELDSIFLDKVIDKLGLCVSVYDIRSIDGGFIF 534
MF+LS IEHT L +AIK EL+ +FLDKVI LGLC+SVYDI SI+GGFIF
Sbjct: 1 MFYLSRIEHTLRVPPDILSRPLTEAIKVELEKLFLDKVIANLGLCISVYDIISIEGGFIF 60
Query: 533 PSDGASTYTVKFRLVMFRPFVGEVILAQIKQSREDGIQLTLGFFDDIYIPVHLLLSETRC 354
P DGA+TYT F ++MFRPFVGE+I A++K+S +G++LTLGFF+DIYIP + L +R
Sbjct: 61 PGDGAATYTAVFTMIMFRPFVGEIISAKVKESDANGLRLTLGFFEDIYIPANFLPDPSRP 120
Query: 353 EHVP--GNKVVWIWKYQETDYHMIEEDEVRFKVHSVSYPPVPKDHGQNLEQKDVKPFSPM 180
E P ++V WIW++ E Y + EDE+RF+VHSV+YPP+P + + K+ KPF+PM
Sbjct: 121 EPDPRKRDRVTWIWEFGEQKYVIDGEDEIRFQVHSVNYPPIPVE-----QPKESKPFAPM 175
Query: 179 VITGSIDLAGLG 144
VITGS+D GLG
Sbjct: 176 VITGSLDCDGLG 187
>ref|XP_002520987.1| DNA-directed RNA polymerase III 25 kD polypeptide, putative
[Ricinus communis] gi|223539824|gb|EEF41404.1|
DNA-directed RNA polymerase III 25 kD polypeptide,
putative [Ricinus communis]
Length = 194
Score = 211 bits (537), Expect = 5e-52
Identities = 110/196 (56%), Positives = 141/196 (71%), Gaps = 6/196 (3%)
Frame = -1
Query: 713 MFFLSEIEHTXXXXXXXXXXXLNDAIKGELDSIFLDKVIDKLGLCVSVYDIRSIDGGFIF 534
MF+LSEIEHT L DA+K EL+ IFLDKVI LGLC+SVYD+ IDGGFIF
Sbjct: 1 MFYLSEIEHTLRLPPSLLSLPLQDAVKKELEIIFLDKVIANLGLCISVYDVTHIDGGFIF 60
Query: 533 PSDGASTYTVKFRLVMFRPFVGEVILAQIKQSREDGIQLTLGFFDDIYIPVHLLLSETRC 354
P DGASTYTV+FR+V+FRPFVGE+I+A++K+S DG++L+LGFFDDIYIP H L +
Sbjct: 61 PGDGASTYTVRFRIVVFRPFVGEIIVAKLKESNNDGLRLSLGFFDDIYIPSHRLPKPSYS 120
Query: 353 EHVPGNK--VVWIWKYQETD----YHMIEEDEVRFKVHSVSYPPVPKDHGQNLEQKDVKP 192
+ P N+ +WIW++ D +++ DE++F+V SV YPPVP LEQ++ KP
Sbjct: 121 QQDPENRYQAIWIWEFVSEDNKMEFNIDGLDEIKFRVDSVKYPPVP------LEQQE-KP 173
Query: 191 FSPMVITGSIDLAGLG 144
F+PMVITGSID GLG
Sbjct: 174 FAPMVITGSIDDEGLG 189
>ref|XP_010323226.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC8 isoform X1
[Solanum lycopersicum]
Length = 199
Score = 210 bits (534), Expect = 1e-51
Identities = 110/198 (55%), Positives = 141/198 (71%), Gaps = 8/198 (4%)
Frame = -1
Query: 713 MFFLSEIEHTXXXXXXXXXXXLNDAIKGELDSIFLDKVIDKLGLCVSVYDIRSIDGGFIF 534
MF+LS +EHT LN+AIKGEL+ +F+DKVI LGL +S+YDIRS+D GFI+
Sbjct: 1 MFYLSVLEHTLRLPPHLLNLPLNEAIKGELEGLFVDKVIANLGLGISIYDIRSVDDGFIY 60
Query: 533 PSDGASTYTVKFRLVMFRPFVGEVILAQIKQSREDGIQ------LTLGFFDDIYIPVHLL 372
PS+GASTY VKFRLV+FRPFVGEVI A++K+S +G++ L+LGFFDDIY+P LL
Sbjct: 61 PSEGASTYKVKFRLVVFRPFVGEVISAKLKESNAEGLRCKRRRMLSLGFFDDIYVPAPLL 120
Query: 371 LSETRCEHVPGNK--VVWIWKYQETDYHMIEEDEVRFKVHSVSYPPVPKDHGQNLEQKDV 198
+R E P NK V WIWK+ E DY + DE+RF+VH+VSYP +P + + KD
Sbjct: 121 PDPSRSEPDPENKNQVRWIWKFDELDYPIDGIDEIRFQVHNVSYPSMPLE-----QDKDS 175
Query: 197 KPFSPMVITGSIDLAGLG 144
KPF+PMVI GS+D GLG
Sbjct: 176 KPFAPMVIKGSLDADGLG 193
>ref|XP_012092104.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC8 [Jatropha
curcas] gi|643704298|gb|KDP21362.1| hypothetical protein
JCGZ_21833 [Jatropha curcas]
Length = 193
Score = 209 bits (533), Expect = 2e-51
Identities = 110/197 (55%), Positives = 144/197 (73%), Gaps = 7/197 (3%)
Frame = -1
Query: 713 MFFLSEIEHTXXXXXXXXXXXLNDAIKGELDSIFLDKVIDKLGLCVSVYDIRSIDGGFIF 534
MF+LS +EHT L+DAIK EL++IFLDKVI LGLC+S+YD+R+I+GGFIF
Sbjct: 1 MFYLSLVEHTLRLPPYLLSLPLDDAIKKELENIFLDKVISNLGLCISIYDLRNIEGGFIF 60
Query: 533 PSDGASTYTVKFRLVMFRPFVGEVILAQIKQSREDGIQLTLGFFDDIYIPVHLLLSETRC 354
P DGASTYTVKFR+V+FRPFVGE I+A++K+S+EDG++L+LGFFDDI+IP H L C
Sbjct: 61 PGDGASTYTVKFRMVVFRPFVGETIVAKLKESKEDGLRLSLGFFDDIHIPAHRL--PKPC 118
Query: 353 EHVPG----NKVVWIWKY---QETDYHMIEEDEVRFKVHSVSYPPVPKDHGQNLEQKDVK 195
VP ++V WIW Y ++ + + DE++FKV SV YPPVP LEQ++ K
Sbjct: 119 HFVPNSEKRDEVTWIWDYPGNEDAVFSIDGIDEIKFKVDSVKYPPVP------LEQQE-K 171
Query: 194 PFSPMVITGSIDLAGLG 144
PF+PM+ITG+ID GLG
Sbjct: 172 PFAPMMITGAIDDDGLG 188
>ref|XP_007050414.1| RNA polymerase Rpb7 N-terminal domain-containing protein [Theobroma
cacao] gi|508702675|gb|EOX94571.1| RNA polymerase Rpb7
N-terminal domain-containing protein [Theobroma cacao]
Length = 210
Score = 209 bits (532), Expect = 2e-51
Identities = 110/200 (55%), Positives = 142/200 (71%), Gaps = 10/200 (5%)
Frame = -1
Query: 713 MFFLSEIEHTXXXXXXXXXXXLNDAIKGELDSIFLDKVIDKLGLCVSVYDIRSIDGGFIF 534
MF+LS IEHT L++AIK EL+++FLDKVI LGLC+SVYDIRSI GGFI+
Sbjct: 1 MFYLSLIEHTLRLPPHLLNLPLDEAIKIELEALFLDKVIANLGLCISVYDIRSIKGGFIY 60
Query: 533 PSDGASTYTVKFRLVMFRPFVGEVILAQIKQSREDGIQLTLGFFDDIYIPVHLLLSETRC 354
P DGASTYTV+FRL++FRPFVGE+I+A++K+S +G++L+LGFFDDIYIPVHLL +R
Sbjct: 61 PGDGASTYTVEFRLIVFRPFVGEIIVAKLKESDANGLRLSLGFFDDIYIPVHLLPIPSRF 120
Query: 353 EHVPGNKVV--WIWKYQETDYHMIEE--------DEVRFKVHSVSYPPVPKDHGQNLEQK 204
E P N+ WIW + E + EE D+++F+VHSV YP +P + +N
Sbjct: 121 ESDPNNRNQGRWIWDFGEAEEAQSEEPRFVIDGMDQIKFRVHSVIYPSIPLEQPEN---- 176
Query: 203 DVKPFSPMVITGSIDLAGLG 144
KPF+PMVITGSID GLG
Sbjct: 177 -SKPFAPMVITGSIDYDGLG 195
>ref|XP_008365292.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC8-like [Malus
domestica]
Length = 267
Score = 207 bits (527), Expect = 8e-51
Identities = 110/204 (53%), Positives = 142/204 (69%), Gaps = 3/204 (1%)
Frame = -1
Query: 746 RRSPFFPISGGMFFLSEIEHTXXXXXXXXXXXLNDAIKGELDSIFLDKVIDKLGLCVSVY 567
RRS + MF+LS IEHT L DA+KGEL+ IFLDKVI KLGLC+SV+
Sbjct: 51 RRSKKLCRAPQMFYLSRIEHTLRLPPHLLSLRLEDAVKGELEKIFLDKVIAKLGLCISVH 110
Query: 566 DIRSIDGGFIFPSDGASTYTVKFRLVMFRPFVGEVILAQIKQSREDGIQLTLGFFDDIYI 387
I+SI GFI P+DG T+ V+F L+MFRPFVGE+I A++K+S +G++L+LGFFDDIY+
Sbjct: 111 SIQSIKDGFILPNDGHPTFRVEFTLIMFRPFVGEIISAKLKESTANGLRLSLGFFDDIYV 170
Query: 386 PVHLLLSETRCEHVP--GNKVVWIWKYQETDYHMIE-EDEVRFKVHSVSYPPVPKDHGQN 216
PVHLL S + E P N V+WIWK + D +E DE+RF+V SV+YPP+P +
Sbjct: 171 PVHLLPSPSCSEPDPEKRNNVIWIWKCPDADDLAVEWTDEIRFQVQSVTYPPIPIE---- 226
Query: 215 LEQKDVKPFSPMVITGSIDLAGLG 144
+ +D KPF+PMVITGSID GLG
Sbjct: 227 -QPEDAKPFAPMVITGSIDYDGLG 249
>ref|XP_012441685.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC8 [Gossypium
raimondii] gi|823128097|ref|XP_012441693.1| PREDICTED:
DNA-directed RNA polymerase III subunit RPC8 [Gossypium
raimondii] gi|823128099|ref|XP_012441701.1| PREDICTED:
DNA-directed RNA polymerase III subunit RPC8 [Gossypium
raimondii] gi|823128101|ref|XP_012441706.1| PREDICTED:
DNA-directed RNA polymerase III subunit RPC8 [Gossypium
raimondii] gi|823128103|ref|XP_012441707.1| PREDICTED:
DNA-directed RNA polymerase III subunit RPC8 [Gossypium
raimondii] gi|823128105|ref|XP_012441713.1| PREDICTED:
DNA-directed RNA polymerase III subunit RPC8 [Gossypium
raimondii] gi|823128107|ref|XP_012441721.1| PREDICTED:
DNA-directed RNA polymerase III subunit RPC8 [Gossypium
raimondii] gi|823128109|ref|XP_012441727.1| PREDICTED:
DNA-directed RNA polymerase III subunit RPC8 [Gossypium
raimondii] gi|823128111|ref|XP_012441736.1| PREDICTED:
DNA-directed RNA polymerase III subunit RPC8 [Gossypium
raimondii] gi|763743650|gb|KJB11149.1| hypothetical
protein B456_001G243200 [Gossypium raimondii]
gi|763743651|gb|KJB11150.1| hypothetical protein
B456_001G243200 [Gossypium raimondii]
gi|763743652|gb|KJB11151.1| hypothetical protein
B456_001G243200 [Gossypium raimondii]
gi|763743653|gb|KJB11152.1| hypothetical protein
B456_001G243200 [Gossypium raimondii]
gi|763743654|gb|KJB11153.1| hypothetical protein
B456_001G243200 [Gossypium raimondii]
gi|763743655|gb|KJB11154.1| hypothetical protein
B456_001G243200 [Gossypium raimondii]
gi|763743656|gb|KJB11155.1| hypothetical protein
B456_001G243200 [Gossypium raimondii]
Length = 210
Score = 206 bits (525), Expect = 1e-50
Identities = 106/200 (53%), Positives = 142/200 (71%), Gaps = 10/200 (5%)
Frame = -1
Query: 713 MFFLSEIEHTXXXXXXXXXXXLNDAIKGELDSIFLDKVIDKLGLCVSVYDIRSIDGGFIF 534
MF+LS IEHT +++AIK EL+++FLDKVI KLGLC+SVYDIRSI GGFIF
Sbjct: 1 MFYLSLIEHTLRLPPHILHLPVDEAIKSELETLFLDKVIAKLGLCISVYDIRSIKGGFIF 60
Query: 533 PSDGASTYTVKFRLVMFRPFVGEVILAQIKQSREDGIQLTLGFFDDIYIPVHLLLSETRC 354
P DGASTYTV+FRL++FRPF+GE+I+A++K+S G++L+LGFFDDIYIPVHLL + +R
Sbjct: 61 PGDGASTYTVEFRLIVFRPFIGEIIVAKLKESDASGLRLSLGFFDDIYIPVHLLPTPSRF 120
Query: 353 EHVPG--NKVVWIWKYQETDYHMIEE--------DEVRFKVHSVSYPPVPKDHGQNLEQK 204
E +P N+ WIW + + + EE D ++F+V SV YP +P + +N
Sbjct: 121 EAIPNTRNQGRWIWDFGDAEEAQSEEPRFVIDGSDPIKFRVDSVIYPSIPLEQPEN---- 176
Query: 203 DVKPFSPMVITGSIDLAGLG 144
KPF+PMVITG+I+ GLG
Sbjct: 177 -SKPFAPMVITGTINYDGLG 195
>gb|KHG16616.1| DNA-directed RNA polymerase III subunit RPC8 [Gossypium arboreum]
Length = 210
Score = 206 bits (525), Expect = 1e-50
Identities = 106/200 (53%), Positives = 142/200 (71%), Gaps = 10/200 (5%)
Frame = -1
Query: 713 MFFLSEIEHTXXXXXXXXXXXLNDAIKGELDSIFLDKVIDKLGLCVSVYDIRSIDGGFIF 534
MF+LS IEHT +++AIK EL+++FLDKVI KLGLC+SVYDIRSI GGFIF
Sbjct: 1 MFYLSLIEHTLRLPPHLLHLSVDEAIKSELETLFLDKVIAKLGLCISVYDIRSIKGGFIF 60
Query: 533 PSDGASTYTVKFRLVMFRPFVGEVILAQIKQSREDGIQLTLGFFDDIYIPVHLLLSETRC 354
P DGASTYTV+FRL++FRPF+GE+I+A++K+S G++L+LGFFDDIYIPVHLL + +R
Sbjct: 61 PGDGASTYTVEFRLIVFRPFIGEIIVAKLKESDASGLRLSLGFFDDIYIPVHLLPTPSRF 120
Query: 353 EHVPG--NKVVWIWKYQETDYHMIEE--------DEVRFKVHSVSYPPVPKDHGQNLEQK 204
E +P N+ WIW + + + EE D ++F+V SV YP +P + +N
Sbjct: 121 EAIPNTRNQGRWIWDFGDAEEAQSEEPRFVIDGSDPIKFRVDSVIYPSIPLEQPEN---- 176
Query: 203 DVKPFSPMVITGSIDLAGLG 144
KPF+PMVITG+I+ GLG
Sbjct: 177 -SKPFAPMVITGTINYDGLG 195
>ref|XP_004135978.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC8 isoform X1
[Cucumis sativus] gi|700189806|gb|KGN45039.1|
hypothetical protein Csa_7G413390 [Cucumis sativus]
Length = 226
Score = 206 bits (523), Expect = 2e-50
Identities = 102/203 (50%), Positives = 141/203 (69%), Gaps = 13/203 (6%)
Frame = -1
Query: 713 MFFLSEIEHTXXXXXXXXXXXLNDAIKGELDSIFLDKVIDKLGLCVSVYDIRSIDGGFIF 534
MF+LS IEHT + DAIKGEL+ +F+DKV+ LGLC+SVYDIRS+DGGFIF
Sbjct: 1 MFYLSRIEHTLRVPPSLLNLPILDAIKGELEKLFIDKVVANLGLCISVYDIRSVDGGFIF 60
Query: 533 PSDGASTYTVKFRLVMFRPFVGEVILAQIKQSREDGIQLTLGFFDDIYIPVHLLL--SET 360
PSDGA+TY V F L++FRPF GEVI+ ++++S E+G++++LGFF+DIY+PV L+ SE
Sbjct: 61 PSDGAATYKVVFTLIVFRPFTGEVIIGKVQESNENGLRISLGFFEDIYVPVELMPSGSEF 120
Query: 359 RCEHVPGNKVVWIWKYQETDYHMIEEDEVRFKVHSVSYPPV----PKDHGQN--LEQK-- 204
+ G + W+W Y E + + E DE++FKVHS+ YP + PK+ +E+K
Sbjct: 121 TPDENNGGRCRWVWIYNEVPFDIYESDEIKFKVHSIEYPAILVEQPKESNSKFPMEEKPK 180
Query: 203 ---DVKPFSPMVITGSIDLAGLG 144
+VKPF+PMVIT S+D GLG
Sbjct: 181 ESINVKPFAPMVITASLDQDGLG 203