BLASTX nr result
ID: Perilla23_contig00023247
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Perilla23_contig00023247 (1118 letters) Database: ./nr 77,306,371 sequences; 28,104,191,420 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_011081158.1| PREDICTED: DNA-directed RNA polymerase IV su... 622 e-175 ref|XP_012835484.1| PREDICTED: DNA-directed RNA polymerase IV su... 582 e-163 gb|EYU38999.1| hypothetical protein MIMGU_mgv1a000239mg [Erythra... 531 e-148 gb|EPS74753.1| hypothetical protein M569_00001, partial [Genlise... 509 e-141 emb|CDP09818.1| unnamed protein product [Coffea canephora] 455 e-125 ref|XP_009797463.1| PREDICTED: DNA-directed RNA polymerase IV su... 426 e-116 ref|XP_006358858.1| PREDICTED: DNA-directed RNA polymerase IV su... 425 e-116 ref|XP_009593317.1| PREDICTED: DNA-directed RNA polymerase IV su... 424 e-116 ref|XP_004245657.1| PREDICTED: DNA-directed RNA polymerase IV su... 421 e-115 ref|XP_011650451.1| PREDICTED: DNA-directed RNA polymerase IV su... 408 e-111 ref|XP_011650450.1| PREDICTED: DNA-directed RNA polymerase IV su... 408 e-111 ref|XP_011650447.1| PREDICTED: DNA-directed RNA polymerase IV su... 408 e-111 ref|XP_010661376.1| PREDICTED: DNA-directed RNA polymerase IV su... 407 e-110 ref|XP_010661369.1| PREDICTED: DNA-directed RNA polymerase IV su... 407 e-110 ref|XP_010661365.1| PREDICTED: DNA-directed RNA polymerase IV su... 407 e-110 ref|XP_007040111.1| DNA-directed RNA polymerase II subunit RPB1-... 406 e-110 emb|CAN66198.1| hypothetical protein VITISV_011232 [Vitis vinifera] 405 e-110 ref|XP_010325436.1| PREDICTED: DNA-directed RNA polymerase IV su... 400 e-109 ref|XP_012476049.1| PREDICTED: DNA-directed RNA polymerase IV su... 400 e-108 gb|KJB25756.1| hypothetical protein B456_004G207300 [Gossypium r... 400 e-108 >ref|XP_011081158.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 [Sesamum indicum] Length = 1408 Score = 622 bits (1605), Expect = e-175 Identities = 305/372 (81%), Positives = 340/372 (91%) Frame = -1 Query: 1118 DGYPKMKFKVSSKDVFAKSAIIAEVSEALLSKSSNGSLASDYWDILPKDSSQEQSSLPSN 939 DGYPKMKFKVSSKDVFAK+AIIAEV+E LL+K+S LA DYWD++PKDS+QE S LP+N Sbjct: 100 DGYPKMKFKVSSKDVFAKTAIIAEVNETLLNKNSVRGLAPDYWDVIPKDSAQEFSGLPAN 159 Query: 938 KRVLMPAQVYNILKDVCPRTLEAFFKRKNLIFVNSLLVTPNSYRVREFGQRIAVDETTKM 759 KRVL+PAQVY+ILK VCPR LEA KRKN IF+NSLLVTPNS+RVREFGQRI VDETTKM Sbjct: 160 KRVLLPAQVYSILKHVCPRVLEALLKRKNSIFLNSLLVTPNSHRVREFGQRITVDETTKM 219 Query: 758 YRKLIDFRGTPNELSARVLERYKLSKIRSEKLSNLQKVYEKQSTNDSASSASGLKNIKDL 579 YRKLIDFRGTPNELSARVL+RYK+SKIRSEKLS+L+K+YEKQSTNDSASSASGLKNIK+L Sbjct: 220 YRKLIDFRGTPNELSARVLDRYKVSKIRSEKLSSLEKIYEKQSTNDSASSASGLKNIKEL 279 Query: 578 LVGKRTDHSFRMVVVGDPRIKVHEIGVPFHVA*NVLIRDHINEWNWEKLMPCCDYMLHRR 399 L+GKRTDHSFRMVVVGDPRIKV EIG+PF +A NVLI DHIN WNW++L PCCD+ML+RR Sbjct: 280 LLGKRTDHSFRMVVVGDPRIKVDEIGLPFQIAENVLISDHINLWNWDRLEPCCDFMLYRR 339 Query: 398 GNFSVIRDGQRITIWFKDMLRAGDSICRPLIDGDIVLVNRPPSIHQHSLIALSVKILPIN 219 G FSV+R+GQRI IW KDMLR GDSICRPLIDGDIVL+NRPPSIHQHSLIALSV+ILPI Sbjct: 340 GYFSVLRNGQRICIWSKDMLRTGDSICRPLIDGDIVLINRPPSIHQHSLIALSVRILPIK 399 Query: 218 HVLSINPLICSPFQGDFDGDCLHGFVPQSINSRVELNELCSLKTQLVNGQNGRNLLALGQ 39 V+SINPL+CSP +GDFDGDCLHG+VPQS+ SRVELNEL SL QL NGQNGRNLL+L Q Sbjct: 400 SVVSINPLVCSPLRGDFDGDCLHGYVPQSVTSRVELNELVSLNEQLHNGQNGRNLLSLSQ 459 Query: 38 DSLTAAYLFLED 3 DSLTAAYLFLED Sbjct: 460 DSLTAAYLFLED 471 >ref|XP_012835484.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 [Erythranthe guttatus] gi|848869730|ref|XP_012835485.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 [Erythranthe guttatus] gi|848869733|ref|XP_012835486.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 [Erythranthe guttatus] Length = 1447 Score = 582 bits (1501), Expect = e-163 Identities = 283/372 (76%), Positives = 330/372 (88%) Frame = -1 Query: 1118 DGYPKMKFKVSSKDVFAKSAIIAEVSEALLSKSSNGSLASDYWDILPKDSSQEQSSLPSN 939 DGYPKM F+VSSKDVFAKSAIIAEV E L++K S+G+LA DYWD++PKDS+ E + LP N Sbjct: 139 DGYPKMTFRVSSKDVFAKSAIIAEVKEILVNKCSSGNLAYDYWDVIPKDSAVEHAVLPPN 198 Query: 938 KRVLMPAQVYNILKDVCPRTLEAFFKRKNLIFVNSLLVTPNSYRVREFGQRIAVDETTKM 759 +RVL+PAQVYNILKDVCP TL+ KRKN IF+NSLLVTPNS+RVREFGQRI +DE T+M Sbjct: 199 RRVLLPAQVYNILKDVCPTTLQGLLKRKNSIFLNSLLVTPNSHRVREFGQRITIDELTRM 258 Query: 758 YRKLIDFRGTPNELSARVLERYKLSKIRSEKLSNLQKVYEKQSTNDSASSASGLKNIKDL 579 YRKL+DFRG+PNEL+ARVL+RYKLSKIRSEK+S++QK YE+QS NDSASS+S LKNIK+L Sbjct: 259 YRKLVDFRGSPNELTARVLDRYKLSKIRSEKVSSMQKEYERQSLNDSASSSSALKNIKEL 318 Query: 578 LVGKRTDHSFRMVVVGDPRIKVHEIGVPFHVA*NVLIRDHINEWNWEKLMPCCDYMLHRR 399 ++ KRTD+ FRMVVVGDPRI+V EIG+P HVA N+LI DHIN WNW+KL CCD+ML + Sbjct: 319 VLAKRTDNCFRMVVVGDPRIRVDEIGLPSHVAENMLIADHINLWNWDKLEVCCDFMLCHK 378 Query: 398 GNFSVIRDGQRITIWFKDMLRAGDSICRPLIDGDIVLVNRPPSIHQHSLIALSVKILPIN 219 GNFS++R+G+RITIW KDMLR GDS+ RPLIDGDIVLVNRPPSIHQHSLIALSVKILP Sbjct: 379 GNFSILRNGERITIWSKDMLRTGDSLRRPLIDGDIVLVNRPPSIHQHSLIALSVKILPTT 438 Query: 218 HVLSINPLICSPFQGDFDGDCLHGFVPQSINSRVELNELCSLKTQLVNGQNGRNLLALGQ 39 V+SINPLICSPF+GDFDGDCLHG+VPQS+NSRVEL EL SL QLVNGQ+GRNLL+L Q Sbjct: 439 SVVSINPLICSPFRGDFDGDCLHGYVPQSVNSRVELQELVSLDKQLVNGQSGRNLLSLAQ 498 Query: 38 DSLTAAYLFLED 3 DSLTAA+L LED Sbjct: 499 DSLTAAHLILED 510 >gb|EYU38999.1| hypothetical protein MIMGU_mgv1a000239mg [Erythranthe guttata] Length = 1379 Score = 531 bits (1367), Expect = e-148 Identities = 264/372 (70%), Positives = 306/372 (82%) Frame = -1 Query: 1118 DGYPKMKFKVSSKDVFAKSAIIAEVSEALLSKSSNGSLASDYWDILPKDSSQEQSSLPSN 939 DGYPKM F+VSSKDVFAKSAIIAEV E L++K S+G+LA DYWD++PKDS+ E + LP N Sbjct: 134 DGYPKMTFRVSSKDVFAKSAIIAEVKEILVNKCSSGNLAYDYWDVIPKDSAVEHAVLPPN 193 Query: 938 KRVLMPAQVYNILKDVCPRTLEAFFKRKNLIFVNSLLVTPNSYRVREFGQRIAVDETTKM 759 +RVL+PAQVYNILKDVCP TL+ KRKN IF+NSLLVTPNS+RVREFGQRI +DE T+M Sbjct: 194 RRVLLPAQVYNILKDVCPTTLQGLLKRKNSIFLNSLLVTPNSHRVREFGQRITIDELTRM 253 Query: 758 YRKLIDFRGTPNELSARVLERYKLSKIRSEKLSNLQKVYEKQSTNDSASSASGLKNIKDL 579 YRKL+DFRG+PNEL+AR S NDSASS+S LKNIK+L Sbjct: 254 YRKLVDFRGSPNELTAR-------------------------SLNDSASSSSALKNIKEL 288 Query: 578 LVGKRTDHSFRMVVVGDPRIKVHEIGVPFHVA*NVLIRDHINEWNWEKLMPCCDYMLHRR 399 ++ KRTD+ FRMVVVGDPRI+V EIG+P HVA N+LI DHIN WNW+KL CCD+ML + Sbjct: 289 VLAKRTDNCFRMVVVGDPRIRVDEIGLPSHVAENMLIADHINLWNWDKLEVCCDFMLCHK 348 Query: 398 GNFSVIRDGQRITIWFKDMLRAGDSICRPLIDGDIVLVNRPPSIHQHSLIALSVKILPIN 219 GNFS++R+G+RITIW KDMLR GDS+ RPLIDGDIVLVNRPPSIHQHSLIALSVKILP Sbjct: 349 GNFSILRNGERITIWSKDMLRTGDSLRRPLIDGDIVLVNRPPSIHQHSLIALSVKILPTT 408 Query: 218 HVLSINPLICSPFQGDFDGDCLHGFVPQSINSRVELNELCSLKTQLVNGQNGRNLLALGQ 39 V+SINPLICSPF+GDFDGDCLHG+VPQS+NSRVEL EL SL QLVNGQ+GRNLL+L Q Sbjct: 409 SVVSINPLICSPFRGDFDGDCLHGYVPQSVNSRVELQELVSLDKQLVNGQSGRNLLSLAQ 468 Query: 38 DSLTAAYLFLED 3 DSLTAA+L LED Sbjct: 469 DSLTAAHLILED 480 >gb|EPS74753.1| hypothetical protein M569_00001, partial [Genlisea aurea] Length = 1380 Score = 509 bits (1311), Expect = e-141 Identities = 255/374 (68%), Positives = 314/374 (83%), Gaps = 3/374 (0%) Frame = -1 Query: 1115 GYPKMKFKVSSKDVFAKSAIIAEVSEALLSKSSNGSLASDYWDILPKDSSQEQSSLPSNK 936 GYPKMKF+VS+++VFAK+AIIAEV E +++ LASDYWDI+PKDS Q+QS +PSN+ Sbjct: 100 GYPKMKFRVSTREVFAKTAIIAEVQEMAVNQHHCIGLASDYWDIIPKDSPQDQSDIPSNR 159 Query: 935 RVLMPAQVYNILKDVCPRTLEAFFKRKNLIFVNSLLVTPNSYRVREFGQRIAVDETTKMY 756 RVL P+QVY+ILKDVCP+TLEA KRKN IF+NSLLVTPNS+RVREFG I VD TT++Y Sbjct: 160 RVLYPSQVYSILKDVCPKTLEALLKRKNSIFLNSLLVTPNSHRVREFGGHITVDGTTRLY 219 Query: 755 RKLIDFRGTPNELSARVLERYKLSKIRSEKLSNLQKVYEKQSTNDSASSASGLKNIKDLL 576 RKL DFRG+ NEL+ARVLERY KI SEK+S ++K+YEKQS+NDSASS+SGL+NIK+L+ Sbjct: 220 RKLTDFRGSANELNARVLERY---KICSEKVSAIEKIYEKQSSNDSASSSSGLRNIKELI 276 Query: 575 VGKRTDHSFRMVVVGDPRIKVHEIGVPFHVA*NVLIRDHINEWNWEKLMPCCDYMLHRR- 399 + KRTD++FRMVVVGDPR+KV EIG+P +A +VLI D I+ +W KL CD ML+++ Sbjct: 277 LAKRTDNAFRMVVVGDPRLKVDEIGLPIQIAESVLISDLISIHSWGKLESWCDLMLYKKA 336 Query: 398 --GNFSVIRDGQRITIWFKDMLRAGDSICRPLIDGDIVLVNRPPSIHQHSLIALSVKILP 225 FSVIR+GQ+ I+ KDML+ GDSI RP+ DGDIVL+NRPPSIHQHSL+ALSVK+LP Sbjct: 337 PFSPFSVIRNGQKTHIFSKDMLQVGDSISRPISDGDIVLINRPPSIHQHSLLALSVKVLP 396 Query: 224 INHVLSINPLICSPFQGDFDGDCLHGFVPQSINSRVELNELCSLKTQLVNGQNGRNLLAL 45 I V++INPL C P +GDFDGDCLHGFVPQS+NSRVE+ EL SLK QLVNGQNGR+L++L Sbjct: 397 IKSVIAINPLTCLPLRGDFDGDCLHGFVPQSLNSRVEIGELASLKKQLVNGQNGRSLMSL 456 Query: 44 GQDSLTAAYLFLED 3 GQDSLTAAYL L + Sbjct: 457 GQDSLTAAYLILNN 470 >emb|CDP09818.1| unnamed protein product [Coffea canephora] Length = 1511 Score = 455 bits (1171), Expect = e-125 Identities = 232/373 (62%), Positives = 287/373 (76%), Gaps = 1/373 (0%) Frame = -1 Query: 1118 DGYPKMKFKVSSKDVFAKSAIIAEVSEALLS-KSSNGSLASDYWDILPKDSSQEQSSLPS 942 D YP MKFKV+SKDVFAK+AI AEVSE S +SSNGS+ASDYWDI+P D+ Q+ S+L S Sbjct: 173 DSYPPMKFKVTSKDVFAKTAISAEVSERSSSNRSSNGSMASDYWDIIPSDAQQDLSNLGS 232 Query: 941 NKRVLMPAQVYNILKDVCPRTLEAFFKRKNLIFVNSLLVTPNSYRVREFGQRIAVDETTK 762 NKR+L AQVYNILKDV PR LE+F KRK+ +F+N L+TPN +RV E GQ I D TK Sbjct: 233 NKRLLSHAQVYNILKDVDPRFLESFLKRKSSVFLNCFLLTPNCHRVTELGQHITFDTKTK 292 Query: 761 MYRKLIDFRGTPNELSARVLERYKLSKIRSEKLSNLQKVYEKQSTNDSASSASGLKNIKD 582 +Y+KLIDFRGT NELSARVL+ K+SK+RSEK S + + DSA + SGLK IK+ Sbjct: 293 LYKKLIDFRGTANELSARVLDLIKVSKVRSEKSSAINSAFSVLGFKDSAVATSGLKYIKE 352 Query: 581 LLVGKRTDHSFRMVVVGDPRIKVHEIGVPFHVA*NVLIRDHINEWNWEKLMPCCDYMLHR 402 LL+GKRTDH+FRMVVVGDP I + EIG+P H+A +L+ +H+N+WN+ KL +L Sbjct: 353 LLLGKRTDHAFRMVVVGDPNINLGEIGMPRHIAEKLLVSEHVNKWNFGKLKDYVALILVG 412 Query: 401 RGNFSVIRDGQRITIWFKDMLRAGDSICRPLIDGDIVLVNRPPSIHQHSLIALSVKILPI 222 G V R G+ + D L GD + RP++DGDIVL+NRPPSIHQHS+++LSV+ILPI Sbjct: 413 GGEICVRRGGRLEKLSIIDKLCCGDVLYRPMLDGDIVLINRPPSIHQHSMLSLSVRILPI 472 Query: 221 NHVLSINPLICSPFQGDFDGDCLHGFVPQSINSRVELNELCSLKTQLVNGQNGRNLLALG 42 N VLSINPLICSP +GDFDGDCLHG+V QS++SRVELNEL +L QL+NGQ+GRNLL+L Sbjct: 473 NSVLSINPLICSPLRGDFDGDCLHGYVSQSVDSRVELNELVALNKQLLNGQSGRNLLSLS 532 Query: 41 QDSLTAAYLFLED 3 DSLTAA+L LED Sbjct: 533 HDSLTAAHLILED 545 >ref|XP_009797463.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X1 [Nicotiana sylvestris] gi|698503797|ref|XP_009797464.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X1 [Nicotiana sylvestris] gi|698503800|ref|XP_009797465.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X1 [Nicotiana sylvestris] gi|698503802|ref|XP_009797466.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X1 [Nicotiana sylvestris] gi|698503804|ref|XP_009797467.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X1 [Nicotiana sylvestris] Length = 1447 Score = 426 bits (1095), Expect = e-116 Identities = 220/372 (59%), Positives = 280/372 (75%), Gaps = 1/372 (0%) Frame = -1 Query: 1115 GYPKMKFKVSSKDVFAKSAIIAEVSEALLSKSSNGSLASDYWDILPKDSSQEQSSLPSN- 939 GYP MKFKVS KD+F ++AIIAEVSE L ++S GSLASDYW+ +P D+ Q+ S S Sbjct: 126 GYPPMKFKVSPKDMFGRTAIIAEVSEKKLQQTSGGSLASDYWNFIPDDAQQDASLNSSKY 185 Query: 938 KRVLMPAQVYNILKDVCPRTLEAFFKRKNLIFVNSLLVTPNSYRVREFGQRIAVDETTKM 759 K+VL AQVY+ILKDV P LE +RKN IF+ S L+TPNS+RV EFGQ + DE+ ++ Sbjct: 186 KKVLTHAQVYSILKDVDPGFLEGLLRRKNSIFLKSCLLTPNSHRVTEFGQHMIFDESNRL 245 Query: 758 YRKLIDFRGTPNELSARVLERYKLSKIRSEKLSNLQKVYEKQSTNDSASSASGLKNIKDL 579 YRKLIDFRGT N+LS V R K+SKIR+E+ TND + A+GLK +K+L Sbjct: 246 YRKLIDFRGTANDLSMCVFNRIKVSKIRAER----------SLTNDPNAPATGLKYVKEL 295 Query: 578 LVGKRTDHSFRMVVVGDPRIKVHEIGVPFHVA*NVLIRDHINEWNWEKLMPCCDYMLHRR 399 ++ KRT+H+FRMVVVGDP IK+ EIG+P HVA ++ + + ++ NWEKL CD M+ ++ Sbjct: 296 VLAKRTNHAFRMVVVGDPNIKLGEIGIPCHVAEDLHMAEPLSSRNWEKLSDHCDLMILQK 355 Query: 398 GNFSVIRDGQRITIWFKDMLRAGDSICRPLIDGDIVLVNRPPSIHQHSLIALSVKILPIN 219 G V R+G + I D L+ GD I RPLIDGD+VL+NRPPSIHQHSLIALSV+ILPI Sbjct: 356 GAIHVRRNGVLVRISVMDQLQRGDIIYRPLIDGDVVLINRPPSIHQHSLIALSVRILPII 415 Query: 218 HVLSINPLICSPFQGDFDGDCLHGFVPQSINSRVELNELCSLKTQLVNGQNGRNLLALGQ 39 VLSINPL+CSPF+GDFDGDCLHG+VPQSI+SRVEL+EL L QL++GQ+G+NLL+L Sbjct: 416 SVLSINPLVCSPFRGDFDGDCLHGYVPQSIDSRVELSELVGLNRQLIDGQSGQNLLSLSH 475 Query: 38 DSLTAAYLFLED 3 DSLTAA+L LE+ Sbjct: 476 DSLTAAHLILEE 487 >ref|XP_006358858.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X1 [Solanum tuberosum] Length = 1446 Score = 425 bits (1093), Expect = e-116 Identities = 220/374 (58%), Positives = 283/374 (75%), Gaps = 4/374 (1%) Frame = -1 Query: 1115 GYPKMKFKVSSKDVFAKSAIIAEVSEALLSK---SSNGSLASDYWDILPKDSSQEQSSLP 945 GYP KFKVS KD+F ++AIIAEV+E LL K ++ SLASDYWD +P D+ QE S Sbjct: 127 GYPPTKFKVSPKDMFGRTAIIAEVNENLLKKVQQTTGVSLASDYWDFIPYDAQQEASVNS 186 Query: 944 SN-KRVLMPAQVYNILKDVCPRTLEAFFKRKNLIFVNSLLVTPNSYRVREFGQRIAVDET 768 SN KRVL AQVY+ILKD+ P LE KRKN IF+ S L+TPNS+RV EFGQ + DE+ Sbjct: 187 SNYKRVLSHAQVYSILKDIDPGFLEGLLKRKNSIFLKSCLLTPNSHRVTEFGQHMIFDES 246 Query: 767 TKMYRKLIDFRGTPNELSARVLERYKLSKIRSEKLSNLQKVYEKQSTNDSASSASGLKNI 588 ++YRKLIDFRGT N+LS VL+R K+SKIR+++ ND + A+GLK + Sbjct: 247 NRLYRKLIDFRGTANDLSMCVLDRIKVSKIRADR----------SVINDPNAPATGLKYV 296 Query: 587 KDLLVGKRTDHSFRMVVVGDPRIKVHEIGVPFHVA*NVLIRDHINEWNWEKLMPCCDYML 408 K+L++ KRT+H+FRMVVVGDP I++ EIG+P HVA N+ + + ++ NWE++ CD M+ Sbjct: 297 KELVLAKRTNHAFRMVVVGDPNIELGEIGIPCHVAENLHMAESLSLRNWERMTDLCDLMI 356 Query: 407 HRRGNFSVIRDGQRITIWFKDMLRAGDSICRPLIDGDIVLVNRPPSIHQHSLIALSVKIL 228 +RG V R+G + I D L+ GD I RPLIDGD+V++NRPPSIHQHSLIALSV+IL Sbjct: 357 LQRGGILVRRNGVLVRISVMDRLQNGDIIHRPLIDGDVVMINRPPSIHQHSLIALSVRIL 416 Query: 227 PINHVLSINPLICSPFQGDFDGDCLHGFVPQSINSRVELNELCSLKTQLVNGQNGRNLLA 48 PIN VLSINPL+CSPF+GDFDGDCLHG++PQSI+SR+EL+EL +LK QL++GQNG+NLL+ Sbjct: 417 PINSVLSINPLVCSPFRGDFDGDCLHGYIPQSIDSRIELSELVALKQQLLDGQNGQNLLS 476 Query: 47 LGQDSLTAAYLFLE 6 L DSLTAA+L LE Sbjct: 477 LSHDSLTAAHLILE 490 >ref|XP_009593317.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X1 [Nicotiana tomentosiformis] Length = 1447 Score = 424 bits (1090), Expect = e-116 Identities = 220/371 (59%), Positives = 278/371 (74%), Gaps = 1/371 (0%) Frame = -1 Query: 1115 GYPKMKFKVSSKDVFAKSAIIAEVSEALLSKSSNGSLASDYWDILPKDSSQEQSSLPSN- 939 GYP MKFKVS KD+F K+AI+AEVSE L ++ GSLASDYW+ +P D+ Q+ S S Sbjct: 126 GYPPMKFKVSPKDMFGKTAIMAEVSEKKLQQTCGGSLASDYWNFIPDDAQQDASLNSSKY 185 Query: 938 KRVLMPAQVYNILKDVCPRTLEAFFKRKNLIFVNSLLVTPNSYRVREFGQRIAVDETTKM 759 KRVL AQVY+ILKDV P LE +RKN IF+ S L+TPNS+RV EFGQ + DE+ ++ Sbjct: 186 KRVLTHAQVYSILKDVDPGFLEGLLRRKNSIFLKSCLLTPNSHRVTEFGQHMIFDESNRL 245 Query: 758 YRKLIDFRGTPNELSARVLERYKLSKIRSEKLSNLQKVYEKQSTNDSASSASGLKNIKDL 579 YRKLIDFRGT N+LS V R K+SKIR+E+ TND + A+GLK +K+L Sbjct: 246 YRKLIDFRGTANDLSMCVFNRIKVSKIRAER----------SLTNDPNAPATGLKYVKEL 295 Query: 578 LVGKRTDHSFRMVVVGDPRIKVHEIGVPFHVA*NVLIRDHINEWNWEKLMPCCDYMLHRR 399 ++ KRT+H+FRMVVVGDP IK+ EIG+P HVA ++ + + ++ NWEKL CD M+ ++ Sbjct: 296 VLAKRTNHAFRMVVVGDPNIKLGEIGIPCHVAEDLHMAEPLSSRNWEKLTDHCDLMILQK 355 Query: 398 GNFSVIRDGQRITIWFKDMLRAGDSICRPLIDGDIVLVNRPPSIHQHSLIALSVKILPIN 219 G V R+G + I D L+ GD I RPLIDGD+VL+NRPPSIHQHSLIALSV+ILPI Sbjct: 356 GAIHVRRNGVLVRISVMDQLQRGDIIYRPLIDGDVVLINRPPSIHQHSLIALSVRILPII 415 Query: 218 HVLSINPLICSPFQGDFDGDCLHGFVPQSINSRVELNELCSLKTQLVNGQNGRNLLALGQ 39 VLSINPL+CSPF+GDFDGDCLHG+VPQSI+SRVEL+EL L QL++GQ+G+NLL+L Sbjct: 416 SVLSINPLVCSPFRGDFDGDCLHGYVPQSIDSRVELSELVGLNRQLIDGQSGQNLLSLSH 475 Query: 38 DSLTAAYLFLE 6 DSLTAA+L LE Sbjct: 476 DSLTAAHLVLE 486 >ref|XP_004245657.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X1 [Solanum lycopersicum] gi|723724576|ref|XP_010325435.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X1 [Solanum lycopersicum] Length = 1446 Score = 421 bits (1081), Expect = e-115 Identities = 217/374 (58%), Positives = 282/374 (75%), Gaps = 4/374 (1%) Frame = -1 Query: 1115 GYPKMKFKVSSKDVFAKSAIIAEVSEALLSK---SSNGSLASDYWDILPKDSSQEQSSLP 945 GYP KFKVS KD+F ++AIIAEV+E LL K ++ SLASDYWD +P D+ QE S Sbjct: 127 GYPPTKFKVSPKDMFGRTAIIAEVNENLLKKVQKTTGVSLASDYWDFIPYDAQQEASVNS 186 Query: 944 SN-KRVLMPAQVYNILKDVCPRTLEAFFKRKNLIFVNSLLVTPNSYRVREFGQRIAVDET 768 SN KRVL AQVY+ILKD+ P LE +RKN IF+ S L+TPNS+RV EFGQ + DE+ Sbjct: 187 SNYKRVLSHAQVYSILKDIDPGFLEGLLRRKNSIFLKSCLLTPNSHRVTEFGQHMIFDES 246 Query: 767 TKMYRKLIDFRGTPNELSARVLERYKLSKIRSEKLSNLQKVYEKQSTNDSASSASGLKNI 588 ++YRKLIDFRGT N+LS VL+R K+SKIR+++ ND + A+GLK + Sbjct: 247 NRLYRKLIDFRGTANDLSMCVLDRIKVSKIRADR----------SVINDPNAPATGLKYV 296 Query: 587 KDLLVGKRTDHSFRMVVVGDPRIKVHEIGVPFHVA*NVLIRDHINEWNWEKLMPCCDYML 408 K+L++ KRT+H+FRMVVVGDP I++ EIG+P HVA N+ + + ++ NWE++ CD M+ Sbjct: 297 KELVLAKRTNHAFRMVVVGDPNIELGEIGIPCHVAENLHMAETLSLRNWERMTDLCDLMI 356 Query: 407 HRRGNFSVIRDGQRITIWFKDMLRAGDSICRPLIDGDIVLVNRPPSIHQHSLIALSVKIL 228 +RG V R+G + I D L+ GD I RPL+DGD+V++NRPPSIHQHSLIALSV+IL Sbjct: 357 LQRGGILVRRNGVLVRISVMDGLQKGDIIHRPLVDGDVVMINRPPSIHQHSLIALSVRIL 416 Query: 227 PINHVLSINPLICSPFQGDFDGDCLHGFVPQSINSRVELNELCSLKTQLVNGQNGRNLLA 48 PIN VLSINPL+CSPF+GDFDGDCLHG++PQSI+S +EL+EL +LK QL++GQNG+NLL+ Sbjct: 417 PINSVLSINPLVCSPFRGDFDGDCLHGYIPQSIDSTIELSELVALKQQLLDGQNGQNLLS 476 Query: 47 LGQDSLTAAYLFLE 6 L DSLTAA+L LE Sbjct: 477 LSHDSLTAAHLILE 490 >ref|XP_011650451.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X3 [Cucumis sativus] Length = 1361 Score = 408 bits (1048), Expect = e-111 Identities = 207/382 (54%), Positives = 274/382 (71%), Gaps = 10/382 (2%) Frame = -1 Query: 1118 DGYPKMKFKVSSKDVFAKSAIIAEVSEALLSKS----SNGSLASDYWDILPKDSSQEQSS 951 D YP M+FK+S+ D+F KS I+ EV E + K + G L SDYWD +PKD QE+S Sbjct: 28 DWYPPMRFKLSTTDMFKKSMIMVEVKENMSKKYQKRVAKGGLPSDYWDFIPKDEQQEESY 87 Query: 950 LPSNKRVLMPAQVYNILKDVCPRTLEAFFKRKNLIFVNSLLVTPNSYRVREF------GQ 789 N+++L AQV+ +LKD+ P+ L+ F + +F+NS VTPNS+RV E GQ Sbjct: 88 CRPNRKILTHAQVHYLLKDIDPKFLKKFVPAIDSLFLNSFPVTPNSHRVTEMAHSFSNGQ 147 Query: 788 RIAVDETTKMYRKLIDFRGTPNELSARVLERYKLSKIRSEKLSNLQKVYEKQSTNDSASS 609 R+ DE T+ Y+K++DFRGT NEL +RVL+ K+SK+ EKL N VY+++ D+A+S Sbjct: 148 RLIFDERTRAYKKVVDFRGTANELGSRVLDCLKISKLSPEKLQNKDLVYQQKKIKDTATS 207 Query: 608 ASGLKNIKDLLVGKRTDHSFRMVVVGDPRIKVHEIGVPFHVA*NVLIRDHINEWNWEKLM 429 +SGL+ IKD+++GKR+DH FRMVVVGDP I++ EIG+P HVA + I +H++ WN +KL Sbjct: 208 SSGLRWIKDVVLGKRSDHCFRMVVVGDPNIELSEIGIPCHVAERLQISEHLSSWNMKKLS 267 Query: 428 PCCDYMLHRRGNFSVIRDGQRITIWFKDMLRAGDSICRPLIDGDIVLVNRPPSIHQHSLI 249 C L +G V R+G+ + + L GD+I RPL DGDIVLVNRPPSIHQHSLI Sbjct: 268 TSCYLHLVEKGEIYVRREGRLVRVRNVLELNMGDTIYRPLADGDIVLVNRPPSIHQHSLI 327 Query: 248 ALSVKILPINHVLSINPLICSPFQGDFDGDCLHGFVPQSINSRVELNELCSLKTQLVNGQ 69 ALSVK+LP++ VLS+NPL CSPF+GDFDGDCLHG+VPQS+ +RVE+ EL SL QL NGQ Sbjct: 328 ALSVKLLPVSAVLSLNPLCCSPFRGDFDGDCLHGYVPQSLEARVEVRELVSLDKQLTNGQ 387 Query: 68 NGRNLLALGQDSLTAAYLFLED 3 +GRNLL+L DSLTAA+L LED Sbjct: 388 SGRNLLSLSHDSLTAAHLILED 409 >ref|XP_011650450.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X2 [Cucumis sativus] Length = 1362 Score = 408 bits (1048), Expect = e-111 Identities = 207/382 (54%), Positives = 274/382 (71%), Gaps = 10/382 (2%) Frame = -1 Query: 1118 DGYPKMKFKVSSKDVFAKSAIIAEVSEALLSKS----SNGSLASDYWDILPKDSSQEQSS 951 D YP M+FK+S+ D+F KS I+ EV E + K + G L SDYWD +PKD QE+S Sbjct: 29 DWYPPMRFKLSTTDMFKKSMIMVEVKENMSKKYQKRVAKGGLPSDYWDFIPKDEQQEESY 88 Query: 950 LPSNKRVLMPAQVYNILKDVCPRTLEAFFKRKNLIFVNSLLVTPNSYRVREF------GQ 789 N+++L AQV+ +LKD+ P+ L+ F + +F+NS VTPNS+RV E GQ Sbjct: 89 CRPNRKILTHAQVHYLLKDIDPKFLKKFVPAIDSLFLNSFPVTPNSHRVTEMAHSFSNGQ 148 Query: 788 RIAVDETTKMYRKLIDFRGTPNELSARVLERYKLSKIRSEKLSNLQKVYEKQSTNDSASS 609 R+ DE T+ Y+K++DFRGT NEL +RVL+ K+SK+ EKL N VY+++ D+A+S Sbjct: 149 RLIFDERTRAYKKVVDFRGTANELGSRVLDCLKISKLSPEKLQNKDLVYQQKKIKDTATS 208 Query: 608 ASGLKNIKDLLVGKRTDHSFRMVVVGDPRIKVHEIGVPFHVA*NVLIRDHINEWNWEKLM 429 +SGL+ IKD+++GKR+DH FRMVVVGDP I++ EIG+P HVA + I +H++ WN +KL Sbjct: 209 SSGLRWIKDVVLGKRSDHCFRMVVVGDPNIELSEIGIPCHVAERLQISEHLSSWNMKKLS 268 Query: 428 PCCDYMLHRRGNFSVIRDGQRITIWFKDMLRAGDSICRPLIDGDIVLVNRPPSIHQHSLI 249 C L +G V R+G+ + + L GD+I RPL DGDIVLVNRPPSIHQHSLI Sbjct: 269 TSCYLHLVEKGEIYVRREGRLVRVRNVLELNMGDTIYRPLADGDIVLVNRPPSIHQHSLI 328 Query: 248 ALSVKILPINHVLSINPLICSPFQGDFDGDCLHGFVPQSINSRVELNELCSLKTQLVNGQ 69 ALSVK+LP++ VLS+NPL CSPF+GDFDGDCLHG+VPQS+ +RVE+ EL SL QL NGQ Sbjct: 329 ALSVKLLPVSAVLSLNPLCCSPFRGDFDGDCLHGYVPQSLEARVEVRELVSLDKQLTNGQ 388 Query: 68 NGRNLLALGQDSLTAAYLFLED 3 +GRNLL+L DSLTAA+L LED Sbjct: 389 SGRNLLSLSHDSLTAAHLILED 410 >ref|XP_011650447.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X1 [Cucumis sativus] gi|778675671|ref|XP_011650448.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X1 [Cucumis sativus] gi|778675673|ref|XP_011650449.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X1 [Cucumis sativus] gi|700200830|gb|KGN55963.1| hypothetical protein Csa_3G039340 [Cucumis sativus] Length = 1483 Score = 408 bits (1048), Expect = e-111 Identities = 207/382 (54%), Positives = 274/382 (71%), Gaps = 10/382 (2%) Frame = -1 Query: 1118 DGYPKMKFKVSSKDVFAKSAIIAEVSEALLSKS----SNGSLASDYWDILPKDSSQEQSS 951 D YP M+FK+S+ D+F KS I+ EV E + K + G L SDYWD +PKD QE+S Sbjct: 150 DWYPPMRFKLSTTDMFKKSMIMVEVKENMSKKYQKRVAKGGLPSDYWDFIPKDEQQEESY 209 Query: 950 LPSNKRVLMPAQVYNILKDVCPRTLEAFFKRKNLIFVNSLLVTPNSYRVREF------GQ 789 N+++L AQV+ +LKD+ P+ L+ F + +F+NS VTPNS+RV E GQ Sbjct: 210 CRPNRKILTHAQVHYLLKDIDPKFLKKFVPAIDSLFLNSFPVTPNSHRVTEMAHSFSNGQ 269 Query: 788 RIAVDETTKMYRKLIDFRGTPNELSARVLERYKLSKIRSEKLSNLQKVYEKQSTNDSASS 609 R+ DE T+ Y+K++DFRGT NEL +RVL+ K+SK+ EKL N VY+++ D+A+S Sbjct: 270 RLIFDERTRAYKKVVDFRGTANELGSRVLDCLKISKLSPEKLQNKDLVYQQKKIKDTATS 329 Query: 608 ASGLKNIKDLLVGKRTDHSFRMVVVGDPRIKVHEIGVPFHVA*NVLIRDHINEWNWEKLM 429 +SGL+ IKD+++GKR+DH FRMVVVGDP I++ EIG+P HVA + I +H++ WN +KL Sbjct: 330 SSGLRWIKDVVLGKRSDHCFRMVVVGDPNIELSEIGIPCHVAERLQISEHLSSWNMKKLS 389 Query: 428 PCCDYMLHRRGNFSVIRDGQRITIWFKDMLRAGDSICRPLIDGDIVLVNRPPSIHQHSLI 249 C L +G V R+G+ + + L GD+I RPL DGDIVLVNRPPSIHQHSLI Sbjct: 390 TSCYLHLVEKGEIYVRREGRLVRVRNVLELNMGDTIYRPLADGDIVLVNRPPSIHQHSLI 449 Query: 248 ALSVKILPINHVLSINPLICSPFQGDFDGDCLHGFVPQSINSRVELNELCSLKTQLVNGQ 69 ALSVK+LP++ VLS+NPL CSPF+GDFDGDCLHG+VPQS+ +RVE+ EL SL QL NGQ Sbjct: 450 ALSVKLLPVSAVLSLNPLCCSPFRGDFDGDCLHGYVPQSLEARVEVRELVSLDKQLTNGQ 509 Query: 68 NGRNLLALGQDSLTAAYLFLED 3 +GRNLL+L DSLTAA+L LED Sbjct: 510 SGRNLLSLSHDSLTAAHLILED 531 >ref|XP_010661376.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X3 [Vitis vinifera] Length = 1354 Score = 407 bits (1045), Expect = e-110 Identities = 209/382 (54%), Positives = 274/382 (71%), Gaps = 10/382 (2%) Frame = -1 Query: 1118 DGYPKMKFKVSSKDVFAKSAIIAEVSEALLSKSSNGS----LASDYWDILPKDSSQEQSS 951 D YP MKFKVSSKD+F K+AII E++E L K S L DYWD +PKD QE++ Sbjct: 28 DWYPTMKFKVSSKDLFRKTAIIVEMNEKLPKKLQKKSFRPVLPLDYWDFIPKDPQQEENC 87 Query: 950 LPSNKRVLMPAQVYNILKDVCPRTLEAFFKRKNLIFVNSLLVTPNSYRVREF------GQ 789 L N+RVL AQV+ +LKD+ P ++ F R + F+N L VTPN++RV E GQ Sbjct: 88 LNPNRRVLSHAQVHYLLKDIDPGFIKEFVSRMDSFFLNCLPVTPNNHRVTEITHALSNGQ 147 Query: 788 RIAVDETTKMYRKLIDFRGTPNELSARVLERYKLSKIRSEKLSNLQKVYEKQSTNDSASS 609 + D+ ++ Y+KL+DFRGT NELS RVL+ K SK+RSEK ++ DSAS Sbjct: 148 TLIFDQHSRAYKKLVDFRGTANELSCRVLDCLKTSKLRSEK----------STSKDSASK 197 Query: 608 ASGLKNIKDLLVGKRTDHSFRMVVVGDPRIKVHEIGVPFHVA*NVLIRDHINEWNWEKLM 429 SGLK IK++L+GKRT+HSFRM+VVGDP++++ EIG+P H+A +LI +H+N WNWEK+ Sbjct: 198 MSGLKWIKEVLLGKRTNHSFRMIVVGDPKLRLSEIGIPCHIAEELLISEHLNSWNWEKVT 257 Query: 428 PCCDYMLHRRGNFSVIRDGQRITIWFKDMLRAGDSICRPLIDGDIVLVNRPPSIHQHSLI 249 C+ L +G V R G + + +AGD I RPL DGDIVL+NRPPSIHQHS+I Sbjct: 258 NGCNLRLLEKGQTYVRRKGTLAPVRRMNDFQAGDIIYRPLTDGDIVLINRPPSIHQHSVI 317 Query: 248 ALSVKILPINHVLSINPLICSPFQGDFDGDCLHGFVPQSINSRVELNELCSLKTQLVNGQ 69 ALSVK+LP+N V+SINPL CSPF+GDFDGDCLHG++PQS++SRVEL+EL +L QL+N Q Sbjct: 318 ALSVKVLPLNSVVSINPLCCSPFRGDFDGDCLHGYIPQSVDSRVELSELVALNRQLINRQ 377 Query: 68 NGRNLLALGQDSLTAAYLFLED 3 +GRNLL+L QDSL+AA+L +ED Sbjct: 378 SGRNLLSLSQDSLSAAHLVMED 399 >ref|XP_010661369.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X2 [Vitis vinifera] Length = 1458 Score = 407 bits (1045), Expect = e-110 Identities = 209/382 (54%), Positives = 274/382 (71%), Gaps = 10/382 (2%) Frame = -1 Query: 1118 DGYPKMKFKVSSKDVFAKSAIIAEVSEALLSKSSNGS----LASDYWDILPKDSSQEQSS 951 D YP MKFKVSSKD+F K+AII E++E L K S L DYWD +PKD QE++ Sbjct: 134 DWYPTMKFKVSSKDLFRKTAIIVEMNEKLPKKLQKKSFRPVLPLDYWDFIPKDPQQEENC 193 Query: 950 LPSNKRVLMPAQVYNILKDVCPRTLEAFFKRKNLIFVNSLLVTPNSYRVREF------GQ 789 L N+RVL AQV+ +LKD+ P ++ F R + F+N L VTPN++RV E GQ Sbjct: 194 LNPNRRVLSHAQVHYLLKDIDPGFIKEFVSRMDSFFLNCLPVTPNNHRVTEITHALSNGQ 253 Query: 788 RIAVDETTKMYRKLIDFRGTPNELSARVLERYKLSKIRSEKLSNLQKVYEKQSTNDSASS 609 + D+ ++ Y+KL+DFRGT NELS RVL+ K SK+RSEK ++ DSAS Sbjct: 254 TLIFDQHSRAYKKLVDFRGTANELSCRVLDCLKTSKLRSEK----------STSKDSASK 303 Query: 608 ASGLKNIKDLLVGKRTDHSFRMVVVGDPRIKVHEIGVPFHVA*NVLIRDHINEWNWEKLM 429 SGLK IK++L+GKRT+HSFRM+VVGDP++++ EIG+P H+A +LI +H+N WNWEK+ Sbjct: 304 MSGLKWIKEVLLGKRTNHSFRMIVVGDPKLRLSEIGIPCHIAEELLISEHLNSWNWEKVT 363 Query: 428 PCCDYMLHRRGNFSVIRDGQRITIWFKDMLRAGDSICRPLIDGDIVLVNRPPSIHQHSLI 249 C+ L +G V R G + + +AGD I RPL DGDIVL+NRPPSIHQHS+I Sbjct: 364 NGCNLRLLEKGQTYVRRKGTLAPVRRMNDFQAGDIIYRPLTDGDIVLINRPPSIHQHSVI 423 Query: 248 ALSVKILPINHVLSINPLICSPFQGDFDGDCLHGFVPQSINSRVELNELCSLKTQLVNGQ 69 ALSVK+LP+N V+SINPL CSPF+GDFDGDCLHG++PQS++SRVEL+EL +L QL+N Q Sbjct: 424 ALSVKVLPLNSVVSINPLCCSPFRGDFDGDCLHGYIPQSVDSRVELSELVALNRQLINRQ 483 Query: 68 NGRNLLALGQDSLTAAYLFLED 3 +GRNLL+L QDSL+AA+L +ED Sbjct: 484 SGRNLLSLSQDSLSAAHLVMED 505 >ref|XP_010661365.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X1 [Vitis vinifera] Length = 1460 Score = 407 bits (1045), Expect = e-110 Identities = 209/382 (54%), Positives = 274/382 (71%), Gaps = 10/382 (2%) Frame = -1 Query: 1118 DGYPKMKFKVSSKDVFAKSAIIAEVSEALLSKSSNGS----LASDYWDILPKDSSQEQSS 951 D YP MKFKVSSKD+F K+AII E++E L K S L DYWD +PKD QE++ Sbjct: 134 DWYPTMKFKVSSKDLFRKTAIIVEMNEKLPKKLQKKSFRPVLPLDYWDFIPKDPQQEENC 193 Query: 950 LPSNKRVLMPAQVYNILKDVCPRTLEAFFKRKNLIFVNSLLVTPNSYRVREF------GQ 789 L N+RVL AQV+ +LKD+ P ++ F R + F+N L VTPN++RV E GQ Sbjct: 194 LNPNRRVLSHAQVHYLLKDIDPGFIKEFVSRMDSFFLNCLPVTPNNHRVTEITHALSNGQ 253 Query: 788 RIAVDETTKMYRKLIDFRGTPNELSARVLERYKLSKIRSEKLSNLQKVYEKQSTNDSASS 609 + D+ ++ Y+KL+DFRGT NELS RVL+ K SK+RSEK ++ DSAS Sbjct: 254 TLIFDQHSRAYKKLVDFRGTANELSCRVLDCLKTSKLRSEK----------STSKDSASK 303 Query: 608 ASGLKNIKDLLVGKRTDHSFRMVVVGDPRIKVHEIGVPFHVA*NVLIRDHINEWNWEKLM 429 SGLK IK++L+GKRT+HSFRM+VVGDP++++ EIG+P H+A +LI +H+N WNWEK+ Sbjct: 304 MSGLKWIKEVLLGKRTNHSFRMIVVGDPKLRLSEIGIPCHIAEELLISEHLNSWNWEKVT 363 Query: 428 PCCDYMLHRRGNFSVIRDGQRITIWFKDMLRAGDSICRPLIDGDIVLVNRPPSIHQHSLI 249 C+ L +G V R G + + +AGD I RPL DGDIVL+NRPPSIHQHS+I Sbjct: 364 NGCNLRLLEKGQTYVRRKGTLAPVRRMNDFQAGDIIYRPLTDGDIVLINRPPSIHQHSVI 423 Query: 248 ALSVKILPINHVLSINPLICSPFQGDFDGDCLHGFVPQSINSRVELNELCSLKTQLVNGQ 69 ALSVK+LP+N V+SINPL CSPF+GDFDGDCLHG++PQS++SRVEL+EL +L QL+N Q Sbjct: 424 ALSVKVLPLNSVVSINPLCCSPFRGDFDGDCLHGYIPQSVDSRVELSELVALNRQLINRQ 483 Query: 68 NGRNLLALGQDSLTAAYLFLED 3 +GRNLL+L QDSL+AA+L +ED Sbjct: 484 SGRNLLSLSQDSLSAAHLVMED 505 >ref|XP_007040111.1| DNA-directed RNA polymerase II subunit RPB1-B, putative [Theobroma cacao] gi|508777356|gb|EOY24612.1| DNA-directed RNA polymerase II subunit RPB1-B, putative [Theobroma cacao] Length = 1484 Score = 406 bits (1043), Expect = e-110 Identities = 210/383 (54%), Positives = 271/383 (70%), Gaps = 11/383 (2%) Frame = -1 Query: 1118 DGYPKMKFKVSSKDVFAKSAIIAEVSEAL---LSKSSNGSLASDYWDILPKDSSQEQSSL 948 D YP M FK+SSKD+F KSAII EVSE + K +L SDYWD +PKD QE+S + Sbjct: 137 DWYPPMNFKISSKDLFRKSAIIVEVSEKSSMKVRKRGKQALPSDYWDFIPKDEQQEESLI 196 Query: 947 PSNKRVLMPAQVYNILKDVCPRTLEAFFKRKNLIFVNSLLVTPNSYRVREF------GQR 786 N+RVL +QV +LKDV P ++ F + IF+N VTPNS+RV E GQR Sbjct: 197 RPNRRVLSHSQVRYLLKDVDPEFIKKFVLSMDSIFLNCFPVTPNSHRVTEIMHASSNGQR 256 Query: 785 IAVDETTKMYRKLIDFRGTPNELSARVLERYKLSKIRSEKLSNLQK--VYEKQSTNDSAS 612 + D+ T++Y+KL DFRG NELS+ VLE K+SK+ EK SN + V ++ DSAS Sbjct: 257 LIFDQRTRVYKKLADFRGIANELSSHVLECLKISKLHLEKPSNEESALVLAQKRNKDSAS 316 Query: 611 SASGLKNIKDLLVGKRTDHSFRMVVVGDPRIKVHEIGVPFHVA*NVLIRDHINEWNWEKL 432 + SGL+ +KD+++GKR DH FRMV+ G+P +K+ EI +P HVA + I + +N WN E+L Sbjct: 317 NMSGLRYMKDVILGKRNDHCFRMVLTGNPNLKLSEISIPCHVAERLQIAEQLNNWNEERL 376 Query: 431 MPCCDYMLHRRGNFSVIRDGQRITIWFKDMLRAGDSICRPLIDGDIVLVNRPPSIHQHSL 252 CCD L +G V R+G+ + I + L+ GD+I RPL +GDI+L+NRPPSIHQHSL Sbjct: 377 KACCDLRLLEKGEIHVRREGRLVRIRHNEKLQVGDTIFRPLNNGDIILINRPPSIHQHSL 436 Query: 251 IALSVKILPINHVLSINPLICSPFQGDFDGDCLHGFVPQSINSRVELNELCSLKTQLVNG 72 IALSVK+LP++ V+SINPLICSPF+GDFDGDCLHG+VPQSI +RVEL EL SL QL+NG Sbjct: 437 IALSVKVLPVSSVVSINPLICSPFRGDFDGDCLHGYVPQSIKARVELIELVSLNRQLING 496 Query: 71 QNGRNLLALGQDSLTAAYLFLED 3 Q+GRNLL+L DSLTAAYL ED Sbjct: 497 QSGRNLLSLSHDSLTAAYLVKED 519 >emb|CAN66198.1| hypothetical protein VITISV_011232 [Vitis vinifera] Length = 1393 Score = 405 bits (1040), Expect = e-110 Identities = 210/382 (54%), Positives = 275/382 (71%), Gaps = 10/382 (2%) Frame = -1 Query: 1118 DGYPKMKFKVSSKDVFAKSAIIAEVSEALLSKSSNGS----LASDYWDILPKDSSQEQSS 951 D YP MKFKVSSKD+F K+AII E++E L K S L DYWD +PKD QE++ Sbjct: 134 DWYPTMKFKVSSKDLFRKTAIIVEMNEKLPKKLQKKSFRPVLPLDYWDFIPKDPQQEENC 193 Query: 950 LPSNKRVLMPAQVYNILKDVCPRTLEAFFKRKNLIFVNSLLVTPNSYRVREF------GQ 789 L N+RVL AQV+ +LKD+ P ++ F R + F+N L VTPN++RV E GQ Sbjct: 194 LNPNRRVLSHAQVHYLLKDIDPGFIKEFVSRMDSFFLNCLPVTPNNHRVTEITHALSNGQ 253 Query: 788 RIAVDETTKMYRKLIDFRGTPNELSARVLERYKLSKIRSEKLSNLQKVYEKQSTNDSASS 609 + D+ ++ Y+KL+DFRGT NELS RVL+ K SK SNL+ EK ++ DSAS Sbjct: 254 TLIFDQHSRAYKKLVDFRGTANELSCRVLDCLKTSKA-----SNLRS--EKSTSKDSASK 306 Query: 608 ASGLKNIKDLLVGKRTDHSFRMVVVGDPRIKVHEIGVPFHVA*NVLIRDHINEWNWEKLM 429 SGLK IK++L+GKRT+HSFRM+VVGDP++++ EIG+P H+A +LI +H+N WNWEK+ Sbjct: 307 MSGLKWIKEVLLGKRTNHSFRMIVVGDPKLRLSEIGIPCHIAEELLISEHLNSWNWEKVT 366 Query: 428 PCCDYMLHRRGNFSVIRDGQRITIWFKDMLRAGDSICRPLIDGDIVLVNRPPSIHQHSLI 249 C+ L +G V R G + + +AGD I RPL DGDIVL+NRPPSIHQHS+I Sbjct: 367 NGCNLRLLEKGQTYVRRKGTLAPVRRMNDFQAGDIIYRPLTDGDIVLINRPPSIHQHSVI 426 Query: 248 ALSVKILPINHVLSINPLICSPFQGDFDGDCLHGFVPQSINSRVELNELCSLKTQLVNGQ 69 ALSVK+LP+N V+SINPL CSPF+GDFDGDCLHG++PQS++SRVEL+EL +L QL+N Q Sbjct: 427 ALSVKVLPLNSVVSINPLCCSPFRGDFDGDCLHGYIPQSVDSRVELSELVALNRQLINRQ 486 Query: 68 NGRNLLALGQDSLTAAYLFLED 3 +GRNLL+L QDSL+AA+L +ED Sbjct: 487 SGRNLLSLSQDSLSAAHLVMED 508 >ref|XP_010325436.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X2 [Solanum lycopersicum] Length = 1307 Score = 400 bits (1029), Expect = e-109 Identities = 207/361 (57%), Positives = 272/361 (75%), Gaps = 4/361 (1%) Frame = -1 Query: 1076 VFAKSAIIAEVSEALLSK---SSNGSLASDYWDILPKDSSQEQSSLPSN-KRVLMPAQVY 909 +F ++AIIAEV+E LL K ++ SLASDYWD +P D+ QE S SN KRVL AQVY Sbjct: 1 MFGRTAIIAEVNENLLKKVQKTTGVSLASDYWDFIPYDAQQEASVNSSNYKRVLSHAQVY 60 Query: 908 NILKDVCPRTLEAFFKRKNLIFVNSLLVTPNSYRVREFGQRIAVDETTKMYRKLIDFRGT 729 +ILKD+ P LE +RKN IF+ S L+TPNS+RV EFGQ + DE+ ++YRKLIDFRGT Sbjct: 61 SILKDIDPGFLEGLLRRKNSIFLKSCLLTPNSHRVTEFGQHMIFDESNRLYRKLIDFRGT 120 Query: 728 PNELSARVLERYKLSKIRSEKLSNLQKVYEKQSTNDSASSASGLKNIKDLLVGKRTDHSF 549 N+LS VL+R K+SKIR+++ ND + A+GLK +K+L++ KRT+H+F Sbjct: 121 ANDLSMCVLDRIKVSKIRADR----------SVINDPNAPATGLKYVKELVLAKRTNHAF 170 Query: 548 RMVVVGDPRIKVHEIGVPFHVA*NVLIRDHINEWNWEKLMPCCDYMLHRRGNFSVIRDGQ 369 RMVVVGDP I++ EIG+P HVA N+ + + ++ NWE++ CD M+ +RG V R+G Sbjct: 171 RMVVVGDPNIELGEIGIPCHVAENLHMAETLSLRNWERMTDLCDLMILQRGGILVRRNGV 230 Query: 368 RITIWFKDMLRAGDSICRPLIDGDIVLVNRPPSIHQHSLIALSVKILPINHVLSINPLIC 189 + I D L+ GD I RPL+DGD+V++NRPPSIHQHSLIALSV+ILPIN VLSINPL+C Sbjct: 231 LVRISVMDGLQKGDIIHRPLVDGDVVMINRPPSIHQHSLIALSVRILPINSVLSINPLVC 290 Query: 188 SPFQGDFDGDCLHGFVPQSINSRVELNELCSLKTQLVNGQNGRNLLALGQDSLTAAYLFL 9 SPF+GDFDGDCLHG++PQSI+S +EL+EL +LK QL++GQNG+NLL+L DSLTAA+L L Sbjct: 291 SPFRGDFDGDCLHGYIPQSIDSTIELSELVALKQQLLDGQNGQNLLSLSHDSLTAAHLIL 350 Query: 8 E 6 E Sbjct: 351 E 351 >ref|XP_012476049.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X3 [Gossypium raimondii] Length = 1300 Score = 400 bits (1028), Expect = e-108 Identities = 203/381 (53%), Positives = 269/381 (70%), Gaps = 11/381 (2%) Frame = -1 Query: 1112 YPKMKFKVSSKDVFAKSAIIAEVSEALLSK---SSNGSLASDYWDILPKDSSQEQSSLPS 942 YP M+FK++SK++F KSAI+ EVSE L K +L +DYWD +PKD QE+ + Sbjct: 139 YPPMRFKITSKELFRKSAIMVEVSENSLMKVRKRGRQALPADYWDFIPKDQQQEEGFVKP 198 Query: 941 NKRVLMPAQVYNILKDVCPRTLEAFFKRKNLIFVNSLLVTPNSYRVREF------GQRIA 780 +RVL AQV ++LKDV P ++ F + IF+N VTPNS+RV E QR+ Sbjct: 199 GRRVLSHAQVRHLLKDVNPEFIKKFISEADSIFLNFFPVTPNSHRVTEIMHTSSNAQRLI 258 Query: 779 VDETTKMYRKLIDFRGTPNELSARVLERYKLSKIRSEKLSNLQK--VYEKQSTNDSASSA 606 DE T++Y+KL+DFRG NELS+ VLE K+SK+ EK S + + DSAS+ Sbjct: 259 FDERTRVYKKLVDFRGLANELSSHVLECLKISKLHVEKPSTEDSALIAALKKNKDSASNM 318 Query: 605 SGLKNIKDLLVGKRTDHSFRMVVVGDPRIKVHEIGVPFHVA*NVLIRDHINEWNWEKLMP 426 SGL+ +KD+++GKR DH FRMV+ G+P +K+ EIG+P HVA + I + +N WN E+L Sbjct: 319 SGLRYMKDVILGKRNDHCFRMVLTGNPNLKLSEIGIPCHVAEKLQIAEQLNRWNEERLKT 378 Query: 425 CCDYMLHRRGNFSVIRDGQRITIWFKDMLRAGDSICRPLIDGDIVLVNRPPSIHQHSLIA 246 CC+ + +G + R+G+ + I + ++ GD+I RPL DGD VL+NRPPSIHQHSLIA Sbjct: 379 CCNLRILEKGEIRIRREGKLVRIRHNEKVQVGDTIYRPLNDGDTVLINRPPSIHQHSLIA 438 Query: 245 LSVKILPINHVLSINPLICSPFQGDFDGDCLHGFVPQSINSRVELNELCSLKTQLVNGQN 66 LSVK+LP+N V+SINPLICSPF+GDFDGDCLHG+VPQSIN+RVEL+EL SL QL+NGQ+ Sbjct: 439 LSVKVLPVNSVVSINPLICSPFRGDFDGDCLHGYVPQSINTRVELSELVSLDRQLINGQS 498 Query: 65 GRNLLALGQDSLTAAYLFLED 3 GRNLL+L DSLTAAYL ED Sbjct: 499 GRNLLSLSHDSLTAAYLVKED 519 >gb|KJB25756.1| hypothetical protein B456_004G207300 [Gossypium raimondii] Length = 1478 Score = 400 bits (1028), Expect = e-108 Identities = 203/381 (53%), Positives = 269/381 (70%), Gaps = 11/381 (2%) Frame = -1 Query: 1112 YPKMKFKVSSKDVFAKSAIIAEVSEALLSK---SSNGSLASDYWDILPKDSSQEQSSLPS 942 YP M+FK++SK++F KSAI+ EVSE L K +L +DYWD +PKD QE+ + Sbjct: 136 YPPMRFKITSKELFRKSAIMVEVSENSLMKVRKRGRQALPADYWDFIPKDQQQEEGFVKP 195 Query: 941 NKRVLMPAQVYNILKDVCPRTLEAFFKRKNLIFVNSLLVTPNSYRVREF------GQRIA 780 +RVL AQV ++LKDV P ++ F + IF+N VTPNS+RV E QR+ Sbjct: 196 GRRVLSHAQVRHLLKDVNPEFIKKFISEADSIFLNFFPVTPNSHRVTEIMHTSSNAQRLI 255 Query: 779 VDETTKMYRKLIDFRGTPNELSARVLERYKLSKIRSEKLSNLQK--VYEKQSTNDSASSA 606 DE T++Y+KL+DFRG NELS+ VLE K+SK+ EK S + + DSAS+ Sbjct: 256 FDERTRVYKKLVDFRGLANELSSHVLECLKISKLHVEKPSTEDSALIAALKKNKDSASNM 315 Query: 605 SGLKNIKDLLVGKRTDHSFRMVVVGDPRIKVHEIGVPFHVA*NVLIRDHINEWNWEKLMP 426 SGL+ +KD+++GKR DH FRMV+ G+P +K+ EIG+P HVA + I + +N WN E+L Sbjct: 316 SGLRYMKDVILGKRNDHCFRMVLTGNPNLKLSEIGIPCHVAEKLQIAEQLNRWNEERLKT 375 Query: 425 CCDYMLHRRGNFSVIRDGQRITIWFKDMLRAGDSICRPLIDGDIVLVNRPPSIHQHSLIA 246 CC+ + +G + R+G+ + I + ++ GD+I RPL DGD VL+NRPPSIHQHSLIA Sbjct: 376 CCNLRILEKGEIRIRREGKLVRIRHNEKVQVGDTIYRPLNDGDTVLINRPPSIHQHSLIA 435 Query: 245 LSVKILPINHVLSINPLICSPFQGDFDGDCLHGFVPQSINSRVELNELCSLKTQLVNGQN 66 LSVK+LP+N V+SINPLICSPF+GDFDGDCLHG+VPQSIN+RVEL+EL SL QL+NGQ+ Sbjct: 436 LSVKVLPVNSVVSINPLICSPFRGDFDGDCLHGYVPQSINTRVELSELVSLDRQLINGQS 495 Query: 65 GRNLLALGQDSLTAAYLFLED 3 GRNLL+L DSLTAAYL ED Sbjct: 496 GRNLLSLSHDSLTAAYLVKED 516