BLASTX nr result

ID: Perilla23_contig00018230 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Perilla23_contig00018230
         (400 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011090986.1| PREDICTED: putative E3 ubiquitin-protein lig...   147   2e-33
ref|XP_011090985.1| PREDICTED: putative E3 ubiquitin-protein lig...   147   2e-33
ref|XP_009787386.1| PREDICTED: putative E3 ubiquitin-protein lig...    60   5e-07
ref|XP_009787385.1| PREDICTED: putative E3 ubiquitin-protein lig...    60   5e-07
ref|XP_009593981.1| PREDICTED: putative E3 ubiquitin-protein lig...    57   4e-06
ref|XP_009593979.1| PREDICTED: putative E3 ubiquitin-protein lig...    57   4e-06

>ref|XP_011090986.1| PREDICTED: putative E3 ubiquitin-protein ligase LIN-1 isoform X2
           [Sesamum indicum]
          Length = 1330

 Score =  147 bits (372), Expect = 2e-33
 Identities = 85/160 (53%), Positives = 102/160 (63%), Gaps = 28/160 (17%)
 Frame = -3

Query: 398 WNHQWPSSKAKPERTGSLHMQREVDETGVLECIPRSFSTSFCDTNVSALGLRPTHQH--- 228
           WN + PS K KPERT SL  Q EVDE  V+ECI RSFSTSFCDT+VSALGLR   Q+   
Sbjct: 388 WNMRAPSCKPKPERTISLQRQTEVDEKKVMECISRSFSTSFCDTDVSALGLRKMDQYAPF 447

Query: 227 -------------IFPVSTRN-------HQKSFSSMTKSLSCRTAL-----QQDENLLIE 123
                        I  ++ +N       HQKS   M KS SCRT L     Q DE+   E
Sbjct: 448 NDDYIDEVEKLHCIGSIALKNCQLSRPLHQKSSKRMKKSSSCRTTLSEVHQQVDESFFFE 507

Query: 122 PTGVVERIISKLCFTEETGSGDHDYTVEMKTIYEMLSTKT 3
            +GV+E+IISKLCFTEE G+G+ DYTVEMKTIYE+L++K+
Sbjct: 508 QSGVLEKIISKLCFTEELGNGEEDYTVEMKTIYEILNSKS 547


>ref|XP_011090985.1| PREDICTED: putative E3 ubiquitin-protein ligase LIN-1 isoform X1
           [Sesamum indicum]
          Length = 1332

 Score =  147 bits (372), Expect = 2e-33
 Identities = 85/160 (53%), Positives = 102/160 (63%), Gaps = 28/160 (17%)
 Frame = -3

Query: 398 WNHQWPSSKAKPERTGSLHMQREVDETGVLECIPRSFSTSFCDTNVSALGLRPTHQH--- 228
           WN + PS K KPERT SL  Q EVDE  V+ECI RSFSTSFCDT+VSALGLR   Q+   
Sbjct: 390 WNMRAPSCKPKPERTISLQRQTEVDEKKVMECISRSFSTSFCDTDVSALGLRKMDQYAPF 449

Query: 227 -------------IFPVSTRN-------HQKSFSSMTKSLSCRTAL-----QQDENLLIE 123
                        I  ++ +N       HQKS   M KS SCRT L     Q DE+   E
Sbjct: 450 NDDYIDEVEKLHCIGSIALKNCQLSRPLHQKSSKRMKKSSSCRTTLSEVHQQVDESFFFE 509

Query: 122 PTGVVERIISKLCFTEETGSGDHDYTVEMKTIYEMLSTKT 3
            +GV+E+IISKLCFTEE G+G+ DYTVEMKTIYE+L++K+
Sbjct: 510 QSGVLEKIISKLCFTEELGNGEEDYTVEMKTIYEILNSKS 549


>ref|XP_009787386.1| PREDICTED: putative E3 ubiquitin-protein ligase LIN isoform X2
           [Nicotiana sylvestris]
          Length = 1336

 Score = 60.5 bits (145), Expect = 5e-07
 Identities = 50/159 (31%), Positives = 72/159 (45%), Gaps = 37/159 (23%)
 Frame = -3

Query: 368 KPERTGSLHMQREVDETGVLECIPRSFSTSFCDTNVSALGLRPTHQHI------------ 225
           K + +G  H  +E  +  +   + R FS SF  T++SA G+R    HI            
Sbjct: 398 KSQVSGLRH--KEGSQVEITNSLSRRFSGSFTHTDLSAEGIRSLKTHINLSGNNEAATMQ 455

Query: 224 ------------FPVSTRNHQ--------KSFSSMTKSLSCRTALQQ-----DENLLIEP 120
                       +PVS   H            SS  K+  C+  L +     +EN   E 
Sbjct: 456 QCLQMIDSTSDGYPVSMSLHDYHLCKTQFPRISSRQKN-RCKKTLNEISEYAEENSQAEQ 514

Query: 119 TGVVERIISKLCFTEETGSGDHDYTVEMKTIYEMLSTKT 3
             ++E+IISKLCF+EE G    DYTV++ TIYE+L+ KT
Sbjct: 515 AAILEKIISKLCFSEEFGD-YKDYTVDLTTIYELLNNKT 552


>ref|XP_009787385.1| PREDICTED: putative E3 ubiquitin-protein ligase LIN isoform X1
           [Nicotiana sylvestris]
          Length = 1337

 Score = 60.5 bits (145), Expect = 5e-07
 Identities = 50/159 (31%), Positives = 72/159 (45%), Gaps = 37/159 (23%)
 Frame = -3

Query: 368 KPERTGSLHMQREVDETGVLECIPRSFSTSFCDTNVSALGLRPTHQHI------------ 225
           K + +G  H  +E  +  +   + R FS SF  T++SA G+R    HI            
Sbjct: 398 KSQVSGLRH--KEGSQVEITNSLSRRFSGSFTHTDLSAEGIRSLKTHINLSGNNEAATMQ 455

Query: 224 ------------FPVSTRNHQ--------KSFSSMTKSLSCRTALQQ-----DENLLIEP 120
                       +PVS   H            SS  K+  C+  L +     +EN   E 
Sbjct: 456 QCLQMIDSTSDGYPVSMSLHDYHLCKTQFPRISSRQKN-RCKKTLNEISEYAEENSQAEQ 514

Query: 119 TGVVERIISKLCFTEETGSGDHDYTVEMKTIYEMLSTKT 3
             ++E+IISKLCF+EE G    DYTV++ TIYE+L+ KT
Sbjct: 515 AAILEKIISKLCFSEEFGD-YKDYTVDLTTIYELLNNKT 552


>ref|XP_009593981.1| PREDICTED: putative E3 ubiquitin-protein ligase LIN isoform X2
           [Nicotiana tomentosiformis]
          Length = 1323

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 47/158 (29%), Positives = 69/158 (43%), Gaps = 36/158 (22%)
 Frame = -3

Query: 368 KPERTGSLHMQREVDETGVLECIPRSFSTSFCDTNVSALGLRPTHQHI------------ 225
           K + +G  H  +E  +  +   + R  S SF  T++SA G+R    HI            
Sbjct: 385 KSQVSGLRH--KEGSQVEITNSLSRRVSGSFTHTDLSAEGIRNLKTHINLSGNNEAATMQ 442

Query: 224 ------------FPVSTRNHQKSFS-------SMTKSLSCRTALQQ-----DENLLIEPT 117
                       +PVS   H            S  +   C+  L +     +EN   E  
Sbjct: 443 QCLQMIDSRSDGYPVSMSLHDYQLCKTQYPRISSRQKNRCKKTLNEISEYAEENSQAEQA 502

Query: 116 GVVERIISKLCFTEETGSGDHDYTVEMKTIYEMLSTKT 3
            ++E+IISKLCF+EE G    DYTV++ TIYE+L+ KT
Sbjct: 503 AILEKIISKLCFSEEFGD-YKDYTVDLTTIYELLNNKT 539


>ref|XP_009593979.1| PREDICTED: putative E3 ubiquitin-protein ligase LIN isoform X1
           [Nicotiana tomentosiformis]
          Length = 1324

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 47/158 (29%), Positives = 69/158 (43%), Gaps = 36/158 (22%)
 Frame = -3

Query: 368 KPERTGSLHMQREVDETGVLECIPRSFSTSFCDTNVSALGLRPTHQHI------------ 225
           K + +G  H  +E  +  +   + R  S SF  T++SA G+R    HI            
Sbjct: 385 KSQVSGLRH--KEGSQVEITNSLSRRVSGSFTHTDLSAEGIRNLKTHINLSGNNEAATMQ 442

Query: 224 ------------FPVSTRNHQKSFS-------SMTKSLSCRTALQQ-----DENLLIEPT 117
                       +PVS   H            S  +   C+  L +     +EN   E  
Sbjct: 443 QCLQMIDSRSDGYPVSMSLHDYQLCKTQYPRISSRQKNRCKKTLNEISEYAEENSQAEQA 502

Query: 116 GVVERIISKLCFTEETGSGDHDYTVEMKTIYEMLSTKT 3
            ++E+IISKLCF+EE G    DYTV++ TIYE+L+ KT
Sbjct: 503 AILEKIISKLCFSEEFGD-YKDYTVDLTTIYELLNNKT 539


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