BLASTX nr result
ID: Perilla23_contig00018230
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Perilla23_contig00018230
(400 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011090986.1| PREDICTED: putative E3 ubiquitin-protein lig... 147 2e-33
ref|XP_011090985.1| PREDICTED: putative E3 ubiquitin-protein lig... 147 2e-33
ref|XP_009787386.1| PREDICTED: putative E3 ubiquitin-protein lig... 60 5e-07
ref|XP_009787385.1| PREDICTED: putative E3 ubiquitin-protein lig... 60 5e-07
ref|XP_009593981.1| PREDICTED: putative E3 ubiquitin-protein lig... 57 4e-06
ref|XP_009593979.1| PREDICTED: putative E3 ubiquitin-protein lig... 57 4e-06
>ref|XP_011090986.1| PREDICTED: putative E3 ubiquitin-protein ligase LIN-1 isoform X2
[Sesamum indicum]
Length = 1330
Score = 147 bits (372), Expect = 2e-33
Identities = 85/160 (53%), Positives = 102/160 (63%), Gaps = 28/160 (17%)
Frame = -3
Query: 398 WNHQWPSSKAKPERTGSLHMQREVDETGVLECIPRSFSTSFCDTNVSALGLRPTHQH--- 228
WN + PS K KPERT SL Q EVDE V+ECI RSFSTSFCDT+VSALGLR Q+
Sbjct: 388 WNMRAPSCKPKPERTISLQRQTEVDEKKVMECISRSFSTSFCDTDVSALGLRKMDQYAPF 447
Query: 227 -------------IFPVSTRN-------HQKSFSSMTKSLSCRTAL-----QQDENLLIE 123
I ++ +N HQKS M KS SCRT L Q DE+ E
Sbjct: 448 NDDYIDEVEKLHCIGSIALKNCQLSRPLHQKSSKRMKKSSSCRTTLSEVHQQVDESFFFE 507
Query: 122 PTGVVERIISKLCFTEETGSGDHDYTVEMKTIYEMLSTKT 3
+GV+E+IISKLCFTEE G+G+ DYTVEMKTIYE+L++K+
Sbjct: 508 QSGVLEKIISKLCFTEELGNGEEDYTVEMKTIYEILNSKS 547
>ref|XP_011090985.1| PREDICTED: putative E3 ubiquitin-protein ligase LIN-1 isoform X1
[Sesamum indicum]
Length = 1332
Score = 147 bits (372), Expect = 2e-33
Identities = 85/160 (53%), Positives = 102/160 (63%), Gaps = 28/160 (17%)
Frame = -3
Query: 398 WNHQWPSSKAKPERTGSLHMQREVDETGVLECIPRSFSTSFCDTNVSALGLRPTHQH--- 228
WN + PS K KPERT SL Q EVDE V+ECI RSFSTSFCDT+VSALGLR Q+
Sbjct: 390 WNMRAPSCKPKPERTISLQRQTEVDEKKVMECISRSFSTSFCDTDVSALGLRKMDQYAPF 449
Query: 227 -------------IFPVSTRN-------HQKSFSSMTKSLSCRTAL-----QQDENLLIE 123
I ++ +N HQKS M KS SCRT L Q DE+ E
Sbjct: 450 NDDYIDEVEKLHCIGSIALKNCQLSRPLHQKSSKRMKKSSSCRTTLSEVHQQVDESFFFE 509
Query: 122 PTGVVERIISKLCFTEETGSGDHDYTVEMKTIYEMLSTKT 3
+GV+E+IISKLCFTEE G+G+ DYTVEMKTIYE+L++K+
Sbjct: 510 QSGVLEKIISKLCFTEELGNGEEDYTVEMKTIYEILNSKS 549
>ref|XP_009787386.1| PREDICTED: putative E3 ubiquitin-protein ligase LIN isoform X2
[Nicotiana sylvestris]
Length = 1336
Score = 60.5 bits (145), Expect = 5e-07
Identities = 50/159 (31%), Positives = 72/159 (45%), Gaps = 37/159 (23%)
Frame = -3
Query: 368 KPERTGSLHMQREVDETGVLECIPRSFSTSFCDTNVSALGLRPTHQHI------------ 225
K + +G H +E + + + R FS SF T++SA G+R HI
Sbjct: 398 KSQVSGLRH--KEGSQVEITNSLSRRFSGSFTHTDLSAEGIRSLKTHINLSGNNEAATMQ 455
Query: 224 ------------FPVSTRNHQ--------KSFSSMTKSLSCRTALQQ-----DENLLIEP 120
+PVS H SS K+ C+ L + +EN E
Sbjct: 456 QCLQMIDSTSDGYPVSMSLHDYHLCKTQFPRISSRQKN-RCKKTLNEISEYAEENSQAEQ 514
Query: 119 TGVVERIISKLCFTEETGSGDHDYTVEMKTIYEMLSTKT 3
++E+IISKLCF+EE G DYTV++ TIYE+L+ KT
Sbjct: 515 AAILEKIISKLCFSEEFGD-YKDYTVDLTTIYELLNNKT 552
>ref|XP_009787385.1| PREDICTED: putative E3 ubiquitin-protein ligase LIN isoform X1
[Nicotiana sylvestris]
Length = 1337
Score = 60.5 bits (145), Expect = 5e-07
Identities = 50/159 (31%), Positives = 72/159 (45%), Gaps = 37/159 (23%)
Frame = -3
Query: 368 KPERTGSLHMQREVDETGVLECIPRSFSTSFCDTNVSALGLRPTHQHI------------ 225
K + +G H +E + + + R FS SF T++SA G+R HI
Sbjct: 398 KSQVSGLRH--KEGSQVEITNSLSRRFSGSFTHTDLSAEGIRSLKTHINLSGNNEAATMQ 455
Query: 224 ------------FPVSTRNHQ--------KSFSSMTKSLSCRTALQQ-----DENLLIEP 120
+PVS H SS K+ C+ L + +EN E
Sbjct: 456 QCLQMIDSTSDGYPVSMSLHDYHLCKTQFPRISSRQKN-RCKKTLNEISEYAEENSQAEQ 514
Query: 119 TGVVERIISKLCFTEETGSGDHDYTVEMKTIYEMLSTKT 3
++E+IISKLCF+EE G DYTV++ TIYE+L+ KT
Sbjct: 515 AAILEKIISKLCFSEEFGD-YKDYTVDLTTIYELLNNKT 552
>ref|XP_009593981.1| PREDICTED: putative E3 ubiquitin-protein ligase LIN isoform X2
[Nicotiana tomentosiformis]
Length = 1323
Score = 57.4 bits (137), Expect = 4e-06
Identities = 47/158 (29%), Positives = 69/158 (43%), Gaps = 36/158 (22%)
Frame = -3
Query: 368 KPERTGSLHMQREVDETGVLECIPRSFSTSFCDTNVSALGLRPTHQHI------------ 225
K + +G H +E + + + R S SF T++SA G+R HI
Sbjct: 385 KSQVSGLRH--KEGSQVEITNSLSRRVSGSFTHTDLSAEGIRNLKTHINLSGNNEAATMQ 442
Query: 224 ------------FPVSTRNHQKSFS-------SMTKSLSCRTALQQ-----DENLLIEPT 117
+PVS H S + C+ L + +EN E
Sbjct: 443 QCLQMIDSRSDGYPVSMSLHDYQLCKTQYPRISSRQKNRCKKTLNEISEYAEENSQAEQA 502
Query: 116 GVVERIISKLCFTEETGSGDHDYTVEMKTIYEMLSTKT 3
++E+IISKLCF+EE G DYTV++ TIYE+L+ KT
Sbjct: 503 AILEKIISKLCFSEEFGD-YKDYTVDLTTIYELLNNKT 539
>ref|XP_009593979.1| PREDICTED: putative E3 ubiquitin-protein ligase LIN isoform X1
[Nicotiana tomentosiformis]
Length = 1324
Score = 57.4 bits (137), Expect = 4e-06
Identities = 47/158 (29%), Positives = 69/158 (43%), Gaps = 36/158 (22%)
Frame = -3
Query: 368 KPERTGSLHMQREVDETGVLECIPRSFSTSFCDTNVSALGLRPTHQHI------------ 225
K + +G H +E + + + R S SF T++SA G+R HI
Sbjct: 385 KSQVSGLRH--KEGSQVEITNSLSRRVSGSFTHTDLSAEGIRNLKTHINLSGNNEAATMQ 442
Query: 224 ------------FPVSTRNHQKSFS-------SMTKSLSCRTALQQ-----DENLLIEPT 117
+PVS H S + C+ L + +EN E
Sbjct: 443 QCLQMIDSRSDGYPVSMSLHDYQLCKTQYPRISSRQKNRCKKTLNEISEYAEENSQAEQA 502
Query: 116 GVVERIISKLCFTEETGSGDHDYTVEMKTIYEMLSTKT 3
++E+IISKLCF+EE G DYTV++ TIYE+L+ KT
Sbjct: 503 AILEKIISKLCFSEEFGD-YKDYTVDLTTIYELLNNKT 539