BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Perilla23_contig00018174
         (1134 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011081084.1| PREDICTED: DNA-directed RNA polymerase III s...   471   e-130
ref|XP_012835512.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   448   e-123
gb|EYU39043.1| hypothetical protein MIMGU_mgv1a000232mg [Erythra...   448   e-123
ref|XP_012854429.1| PREDICTED: DNA-directed RNA polymerase III s...   446   e-122
ref|XP_012854428.1| PREDICTED: DNA-directed RNA polymerase III s...   446   e-122
gb|EYU23204.1| hypothetical protein MIMGU_mgv1a000506mg [Erythra...   446   e-122
gb|EPS62830.1| hypothetical protein M569_11956, partial [Genlise...   353   1e-94
ref|XP_006365151.1| PREDICTED: DNA-directed RNA polymerase III s...   337   1e-89
ref|XP_004251448.1| PREDICTED: DNA-directed RNA polymerase III s...   332   3e-88
ref|XP_009800353.1| PREDICTED: DNA-directed RNA polymerase III s...   330   1e-87
ref|XP_009610319.1| PREDICTED: DNA-directed RNA polymerase III s...   327   1e-86
ref|XP_009610317.1| PREDICTED: DNA-directed RNA polymerase III s...   327   1e-86
ref|XP_010092991.1| DNA-directed RNA polymerase III subunit RPC1...   325   6e-86
ref|XP_006365152.1| PREDICTED: DNA-directed RNA polymerase III s...   325   6e-86
ref|XP_006488216.1| PREDICTED: DNA-directed RNA polymerase III s...   310   1e-81
ref|XP_006424701.1| hypothetical protein CICLE_v10027681mg [Citr...   310   1e-81
gb|KDO73040.1| hypothetical protein CISIN_1g000828mg [Citrus sin...   307   1e-80
ref|XP_008358068.1| PREDICTED: DNA-directed RNA polymerase III s...   305   5e-80
ref|XP_008358064.1| PREDICTED: DNA-directed RNA polymerase III s...   305   5e-80
ref|XP_008222562.1| PREDICTED: DNA-directed RNA polymerase III s...   303   2e-79

>ref|XP_011081084.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 [Sesamum
            indicum]
          Length = 1405

 Score =  471 bits (1211), Expect = e-130
 Identities = 260/377 (68%), Positives = 292/377 (77%)
 Frame = -2

Query: 1133 RNASACIVQFVYGGDAMDPAQMEEKSGLPLNFERLFMKAKATCPATDQKSLTTEEIKEIV 954
            RNAS  IVQFVYGGD MDPAQMEEKSGLPLNFERLFMKAKATCPA ++KSL TEEIK+IV
Sbjct: 887  RNASGSIVQFVYGGDGMDPAQMEEKSGLPLNFERLFMKAKATCPAAEEKSLNTEEIKKIV 946

Query: 953  NKTVERRLLNSTMTFEGGCSQSLPSSDTPFKDGCLEAFAQSIRNFIEKKCPSSILKLKLS 774
            N+ +E RL  STM  E  C +  P SDTP K   LE F +S+++FIEKK PSS L LKL+
Sbjct: 947  NEMIEERLPKSTMDLEEECLKDPPPSDTPSKKETLETFDKSLKSFIEKKHPSSDLMLKLN 1006

Query: 773  EGVYSEEDRSYLKNVDSNVSGITQRQLMVFLETCISRYHSKKXXXXXXXXXXXXXXXGEP 594
            EG YS ED+  L+ + SNVSGIT+ QL+VFLETCI+RY+SKK               GEP
Sbjct: 1007 EGGYSGEDQVSLEKLASNVSGITRNQLVVFLETCITRYNSKKIEAGTAIGAIGAQSIGEP 1066

Query: 593  GTQMTLKTFHFAGVASMNVTLGVPRXXXXXXXXXXXNTPIITTVLQCDNNDIIAKLVKGR 414
            GTQMTLKTFHFAGVASMNVTLGVPR           NTPIITT LQ ++NDIIAKLVKGR
Sbjct: 1067 GTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAKRINTPIITTALQSNDNDIIAKLVKGR 1126

Query: 413  IERTLLEQVAKSIKTSQASRLASIVITLDMRRIQGAQLSIDAYSVKESILRTPKMKLKEQ 234
            IE+TLLEQVAKSIKTSQASR ASIVITLDM+RIQGAQLSIDAY+VKES+L+TP+MKLKEQ
Sbjct: 1127 IEKTLLEQVAKSIKTSQASRSASIVITLDMKRIQGAQLSIDAYTVKESVLQTPRMKLKEQ 1186

Query: 233  QIKVLHAGKLEVILQADRSKLQFELHXXXXXXXXXXXXXXXXVERAIIVNEAKEKDPGQN 54
            Q+KVL+  KLEV+LQADRSKL FE+H                VER IIVNEAKEKDP   
Sbjct: 1187 QVKVLNPRKLEVVLQADRSKLHFEVHAIKNKLSKVVVKGINSVERVIIVNEAKEKDP-TR 1245

Query: 53   KRLKLLVEGTGLLSVIG 3
            K+LKLLVEGTGLLSV+G
Sbjct: 1246 KKLKLLVEGTGLLSVMG 1262


>ref|XP_012835512.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase III
            subunit rpc1-like [Erythranthe guttatus]
          Length = 1405

 Score =  448 bits (1152), Expect = e-123
 Identities = 242/377 (64%), Positives = 285/377 (75%)
 Frame = -2

Query: 1133 RNASACIVQFVYGGDAMDPAQMEEKSGLPLNFERLFMKAKATCPATDQKSLTTEEIKEIV 954
            RNAS CIVQFVYGGDAMDP QMEEKSGLPLNFERLFMKAKATCPA +QKSL+ EEI + +
Sbjct: 888  RNASVCIVQFVYGGDAMDPGQMEEKSGLPLNFERLFMKAKATCPAVEQKSLSIEEIDKTM 947

Query: 953  NKTVERRLLNSTMTFEGGCSQSLPSSDTPFKDGCLEAFAQSIRNFIEKKCPSSILKLKLS 774
            ++ +  RL  ST T EG  SQ+  +S    K+G +E F  S+R FI+KK P+S L LKL+
Sbjct: 948  DEIIGDRLSESTATPEGESSQAFSASSN--KEGGMETFDNSLRKFIQKKYPNSDLMLKLN 1005

Query: 773  EGVYSEEDRSYLKNVDSNVSGITQRQLMVFLETCISRYHSKKXXXXXXXXXXXXXXXGEP 594
               +S+ED+ YL+ + SN+ G+T++QLMVFLETCISRY  KK               GEP
Sbjct: 1006 GKEHSDEDKGYLEKIASNICGVTRQQLMVFLETCISRYRLKKIEGGTAIGAIGAHSIGEP 1065

Query: 593  GTQMTLKTFHFAGVASMNVTLGVPRXXXXXXXXXXXNTPIITTVLQCDNNDIIAKLVKGR 414
            GTQMTLKTFHFAGVASMNVTLGVPR           NTPII+T LQ DNN+IIAK+VKGR
Sbjct: 1066 GTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAKKINTPIISTALQSDNNEIIAKIVKGR 1125

Query: 413  IERTLLEQVAKSIKTSQASRLASIVITLDMRRIQGAQLSIDAYSVKESILRTPKMKLKEQ 234
            IE+TLLEQVAKSIKTSQASR  SIVITLDM +IQGA LS+DAY+VKESIL+T +MKLKEQ
Sbjct: 1126 IEKTLLEQVAKSIKTSQASRSTSIVITLDMTKIQGAHLSVDAYTVKESILKTKRMKLKEQ 1185

Query: 233  QIKVLHAGKLEVILQADRSKLQFELHXXXXXXXXXXXXXXXXVERAIIVNEAKEKDPGQN 54
            Q+KVL   KLE+++QAD++KLQFELH                VERAII+NEAKEKDP  N
Sbjct: 1186 QVKVLDHRKLEIVMQADKTKLQFELHGLKNKISKVVVKGIDTVERAIILNEAKEKDPSAN 1245

Query: 53   KRLKLLVEGTGLLSVIG 3
            K++KLLVEGTGLLSV+G
Sbjct: 1246 KKMKLLVEGTGLLSVMG 1262


>gb|EYU39043.1| hypothetical protein MIMGU_mgv1a000232mg [Erythranthe guttata]
          Length = 1394

 Score =  448 bits (1152), Expect = e-123
 Identities = 242/377 (64%), Positives = 285/377 (75%)
 Frame = -2

Query: 1133 RNASACIVQFVYGGDAMDPAQMEEKSGLPLNFERLFMKAKATCPATDQKSLTTEEIKEIV 954
            RNAS CIVQFVYGGDAMDP QMEEKSGLPLNFERLFMKAKATCPA +QKSL+ EEI + +
Sbjct: 877  RNASVCIVQFVYGGDAMDPGQMEEKSGLPLNFERLFMKAKATCPAVEQKSLSIEEIDKTM 936

Query: 953  NKTVERRLLNSTMTFEGGCSQSLPSSDTPFKDGCLEAFAQSIRNFIEKKCPSSILKLKLS 774
            ++ +  RL  ST T EG  SQ+  +S    K+G +E F  S+R FI+KK P+S L LKL+
Sbjct: 937  DEIIGDRLSESTATPEGESSQAFSASSN--KEGGMETFDNSLRKFIQKKYPNSDLMLKLN 994

Query: 773  EGVYSEEDRSYLKNVDSNVSGITQRQLMVFLETCISRYHSKKXXXXXXXXXXXXXXXGEP 594
               +S+ED+ YL+ + SN+ G+T++QLMVFLETCISRY  KK               GEP
Sbjct: 995  GKEHSDEDKGYLEKIASNICGVTRQQLMVFLETCISRYRLKKIEGGTAIGAIGAHSIGEP 1054

Query: 593  GTQMTLKTFHFAGVASMNVTLGVPRXXXXXXXXXXXNTPIITTVLQCDNNDIIAKLVKGR 414
            GTQMTLKTFHFAGVASMNVTLGVPR           NTPII+T LQ DNN+IIAK+VKGR
Sbjct: 1055 GTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAKKINTPIISTALQSDNNEIIAKIVKGR 1114

Query: 413  IERTLLEQVAKSIKTSQASRLASIVITLDMRRIQGAQLSIDAYSVKESILRTPKMKLKEQ 234
            IE+TLLEQVAKSIKTSQASR  SIVITLDM +IQGA LS+DAY+VKESIL+T +MKLKEQ
Sbjct: 1115 IEKTLLEQVAKSIKTSQASRSTSIVITLDMTKIQGAHLSVDAYTVKESILKTKRMKLKEQ 1174

Query: 233  QIKVLHAGKLEVILQADRSKLQFELHXXXXXXXXXXXXXXXXVERAIIVNEAKEKDPGQN 54
            Q+KVL   KLE+++QAD++KLQFELH                VERAII+NEAKEKDP  N
Sbjct: 1175 QVKVLDHRKLEIVMQADKTKLQFELHGLKNKISKVVVKGIDTVERAIILNEAKEKDPSAN 1234

Query: 53   KRLKLLVEGTGLLSVIG 3
            K++KLLVEGTGLLSV+G
Sbjct: 1235 KKMKLLVEGTGLLSVMG 1251


>ref|XP_012854429.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like isoform
            X2 [Erythranthe guttatus]
            gi|848912313|ref|XP_012854431.1| PREDICTED: DNA-directed
            RNA polymerase III subunit rpc1-like isoform X2
            [Erythranthe guttatus] gi|848912315|ref|XP_012854432.1|
            PREDICTED: DNA-directed RNA polymerase III subunit
            rpc1-like isoform X2 [Erythranthe guttatus]
            gi|848912317|ref|XP_012854433.1| PREDICTED: DNA-directed
            RNA polymerase III subunit rpc1-like isoform X2
            [Erythranthe guttatus] gi|848912319|ref|XP_012854434.1|
            PREDICTED: DNA-directed RNA polymerase III subunit
            rpc1-like isoform X2 [Erythranthe guttatus]
          Length = 1405

 Score =  446 bits (1146), Expect = e-122
 Identities = 242/377 (64%), Positives = 283/377 (75%)
 Frame = -2

Query: 1133 RNASACIVQFVYGGDAMDPAQMEEKSGLPLNFERLFMKAKATCPATDQKSLTTEEIKEIV 954
            RNAS CIVQFVYGGDAMDP QMEEKSGLPLNFERLFMKAKATCPA +QKSL+ EEI + +
Sbjct: 888  RNASVCIVQFVYGGDAMDPGQMEEKSGLPLNFERLFMKAKATCPAVEQKSLSIEEIDKTM 947

Query: 953  NKTVERRLLNSTMTFEGGCSQSLPSSDTPFKDGCLEAFAQSIRNFIEKKCPSSILKLKLS 774
            ++ +  RL  ST T EG  SQ+  +S    K+G +E F  S+R FI+KK P+S L LKL+
Sbjct: 948  DEIIGDRLSESTGTPEGESSQAFSASSN--KEGGMETFDNSLRKFIQKKYPNSDLMLKLN 1005

Query: 773  EGVYSEEDRSYLKNVDSNVSGITQRQLMVFLETCISRYHSKKXXXXXXXXXXXXXXXGEP 594
               + +ED+ YL+ + SN+ G+T++QLMVFLETCISRY  KK               GEP
Sbjct: 1006 GKEHPDEDKGYLEKIASNICGVTRQQLMVFLETCISRYSLKKIEGGTAIGAIGAHSIGEP 1065

Query: 593  GTQMTLKTFHFAGVASMNVTLGVPRXXXXXXXXXXXNTPIITTVLQCDNNDIIAKLVKGR 414
            GTQMTLKTFHFAGVASMNVTLGVPR           NTPIITT LQ DNN+IIAK+VKGR
Sbjct: 1066 GTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAKKINTPIITTALQSDNNEIIAKIVKGR 1125

Query: 413  IERTLLEQVAKSIKTSQASRLASIVITLDMRRIQGAQLSIDAYSVKESILRTPKMKLKEQ 234
            IE+TLLEQVAKSIKTSQASR ASIVITLDM +IQGA LS+DAY+VKESIL+T +MKLKEQ
Sbjct: 1126 IEKTLLEQVAKSIKTSQASRSASIVITLDMTKIQGAHLSVDAYTVKESILKTKRMKLKEQ 1185

Query: 233  QIKVLHAGKLEVILQADRSKLQFELHXXXXXXXXXXXXXXXXVERAIIVNEAKEKDPGQN 54
            Q+KVL   KLE+++ AD+ KLQFELH                VERAII+NEAKEKDP  N
Sbjct: 1186 QVKVLDHRKLEIVMHADKKKLQFELHGLKNKISKVVVKGIDTVERAIILNEAKEKDPSAN 1245

Query: 53   KRLKLLVEGTGLLSVIG 3
            K++KLLVEGTGLLSV+G
Sbjct: 1246 KKMKLLVEGTGLLSVMG 1262


>ref|XP_012854428.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like isoform
            X1 [Erythranthe guttatus]
          Length = 1412

 Score =  446 bits (1146), Expect = e-122
 Identities = 242/377 (64%), Positives = 283/377 (75%)
 Frame = -2

Query: 1133 RNASACIVQFVYGGDAMDPAQMEEKSGLPLNFERLFMKAKATCPATDQKSLTTEEIKEIV 954
            RNAS CIVQFVYGGDAMDP QMEEKSGLPLNFERLFMKAKATCPA +QKSL+ EEI + +
Sbjct: 895  RNASVCIVQFVYGGDAMDPGQMEEKSGLPLNFERLFMKAKATCPAVEQKSLSIEEIDKTM 954

Query: 953  NKTVERRLLNSTMTFEGGCSQSLPSSDTPFKDGCLEAFAQSIRNFIEKKCPSSILKLKLS 774
            ++ +  RL  ST T EG  SQ+  +S    K+G +E F  S+R FI+KK P+S L LKL+
Sbjct: 955  DEIIGDRLSESTGTPEGESSQAFSASSN--KEGGMETFDNSLRKFIQKKYPNSDLMLKLN 1012

Query: 773  EGVYSEEDRSYLKNVDSNVSGITQRQLMVFLETCISRYHSKKXXXXXXXXXXXXXXXGEP 594
               + +ED+ YL+ + SN+ G+T++QLMVFLETCISRY  KK               GEP
Sbjct: 1013 GKEHPDEDKGYLEKIASNICGVTRQQLMVFLETCISRYSLKKIEGGTAIGAIGAHSIGEP 1072

Query: 593  GTQMTLKTFHFAGVASMNVTLGVPRXXXXXXXXXXXNTPIITTVLQCDNNDIIAKLVKGR 414
            GTQMTLKTFHFAGVASMNVTLGVPR           NTPIITT LQ DNN+IIAK+VKGR
Sbjct: 1073 GTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAKKINTPIITTALQSDNNEIIAKIVKGR 1132

Query: 413  IERTLLEQVAKSIKTSQASRLASIVITLDMRRIQGAQLSIDAYSVKESILRTPKMKLKEQ 234
            IE+TLLEQVAKSIKTSQASR ASIVITLDM +IQGA LS+DAY+VKESIL+T +MKLKEQ
Sbjct: 1133 IEKTLLEQVAKSIKTSQASRSASIVITLDMTKIQGAHLSVDAYTVKESILKTKRMKLKEQ 1192

Query: 233  QIKVLHAGKLEVILQADRSKLQFELHXXXXXXXXXXXXXXXXVERAIIVNEAKEKDPGQN 54
            Q+KVL   KLE+++ AD+ KLQFELH                VERAII+NEAKEKDP  N
Sbjct: 1193 QVKVLDHRKLEIVMHADKKKLQFELHGLKNKISKVVVKGIDTVERAIILNEAKEKDPSAN 1252

Query: 53   KRLKLLVEGTGLLSVIG 3
            K++KLLVEGTGLLSV+G
Sbjct: 1253 KKMKLLVEGTGLLSVMG 1269


>gb|EYU23204.1| hypothetical protein MIMGU_mgv1a000506mg [Erythranthe guttata]
          Length = 1109

 Score =  446 bits (1146), Expect = e-122
 Identities = 242/377 (64%), Positives = 283/377 (75%)
 Frame = -2

Query: 1133 RNASACIVQFVYGGDAMDPAQMEEKSGLPLNFERLFMKAKATCPATDQKSLTTEEIKEIV 954
            RNAS CIVQFVYGGDAMDP QMEEKSGLPLNFERLFMKAKATCPA +QKSL+ EEI + +
Sbjct: 592  RNASVCIVQFVYGGDAMDPGQMEEKSGLPLNFERLFMKAKATCPAVEQKSLSIEEIDKTM 651

Query: 953  NKTVERRLLNSTMTFEGGCSQSLPSSDTPFKDGCLEAFAQSIRNFIEKKCPSSILKLKLS 774
            ++ +  RL  ST T EG  SQ+  +S    K+G +E F  S+R FI+KK P+S L LKL+
Sbjct: 652  DEIIGDRLSESTGTPEGESSQAFSASSN--KEGGMETFDNSLRKFIQKKYPNSDLMLKLN 709

Query: 773  EGVYSEEDRSYLKNVDSNVSGITQRQLMVFLETCISRYHSKKXXXXXXXXXXXXXXXGEP 594
               + +ED+ YL+ + SN+ G+T++QLMVFLETCISRY  KK               GEP
Sbjct: 710  GKEHPDEDKGYLEKIASNICGVTRQQLMVFLETCISRYSLKKIEGGTAIGAIGAHSIGEP 769

Query: 593  GTQMTLKTFHFAGVASMNVTLGVPRXXXXXXXXXXXNTPIITTVLQCDNNDIIAKLVKGR 414
            GTQMTLKTFHFAGVASMNVTLGVPR           NTPIITT LQ DNN+IIAK+VKGR
Sbjct: 770  GTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAKKINTPIITTALQSDNNEIIAKIVKGR 829

Query: 413  IERTLLEQVAKSIKTSQASRLASIVITLDMRRIQGAQLSIDAYSVKESILRTPKMKLKEQ 234
            IE+TLLEQVAKSIKTSQASR ASIVITLDM +IQGA LS+DAY+VKESIL+T +MKLKEQ
Sbjct: 830  IEKTLLEQVAKSIKTSQASRSASIVITLDMTKIQGAHLSVDAYTVKESILKTKRMKLKEQ 889

Query: 233  QIKVLHAGKLEVILQADRSKLQFELHXXXXXXXXXXXXXXXXVERAIIVNEAKEKDPGQN 54
            Q+KVL   KLE+++ AD+ KLQFELH                VERAII+NEAKEKDP  N
Sbjct: 890  QVKVLDHRKLEIVMHADKKKLQFELHGLKNKISKVVVKGIDTVERAIILNEAKEKDPSAN 949

Query: 53   KRLKLLVEGTGLLSVIG 3
            K++KLLVEGTGLLSV+G
Sbjct: 950  KKMKLLVEGTGLLSVMG 966


>gb|EPS62830.1| hypothetical protein M569_11956, partial [Genlisea aurea]
          Length = 1368

 Score =  353 bits (907), Expect = 1e-94
 Identities = 202/378 (53%), Positives = 248/378 (65%), Gaps = 1/378 (0%)
 Frame = -2

Query: 1133 RNASACIVQFVYGGDAMDPAQMEEKSGLPLNFERLFMKAKATCPATDQKSLTTEEIKEIV 954
            RNAS CIVQF YG D +DPAQMEEK+G PLNFERLFMKAKATCP+  Q SL  E+I  I+
Sbjct: 879  RNASGCIVQFTYGDDGLDPAQMEEKTGFPLNFERLFMKAKATCPSEGQPSLKAEDIDFII 938

Query: 953  NKTVERRLLNSTMTFEGGCSQSLPSSDTPFKDGCLEAFAQSIRNFIEKKC-PSSILKLKL 777
            N+ +E               ++   SD    + C E F  S+  F+ K+  P+ +L  KL
Sbjct: 939  NRVIE---------------ENHSRSDISEMEKCSETFEASLLRFLNKRVYPTGMLSEKL 983

Query: 776  SEGVYSEEDRSYLKNVDSNVSGITQRQLMVFLETCISRYHSKKXXXXXXXXXXXXXXXGE 597
            +    S +D+SY+++V S+ SGITQ+QL VFL  C +RYH KK               GE
Sbjct: 984  NSENISLQDKSYVQSVVSSTSGITQQQLEVFLNMCFARYHPKKIECGTAVGAIGAQSIGE 1043

Query: 596  PGTQMTLKTFHFAGVASMNVTLGVPRXXXXXXXXXXXNTPIITTVLQCDNNDIIAKLVKG 417
            PGTQMTLKTFHFAGVASMNVTLGVPR            TP+ITT LQ  +  I A++VKG
Sbjct: 1044 PGTQMTLKTFHFAGVASMNVTLGVPRIREIIDAAKKIKTPVITTELQRKDCGITARIVKG 1103

Query: 416  RIERTLLEQVAKSIKTSQASRLASIVITLDMRRIQGAQLSIDAYSVKESILRTPKMKLKE 237
            RIE+TLL ++AKS+K S+ +R ASIVI LD + I+ AQL IDAY+VKESIL TPKMKLKE
Sbjct: 1104 RIEKTLLGEIAKSMKVSEMTRTASIVIKLDTKVIEAAQLFIDAYTVKESILLTPKMKLKE 1163

Query: 236  QQIKVLHAGKLEVILQADRSKLQFELHXXXXXXXXXXXXXXXXVERAIIVNEAKEKDPGQ 57
            QQI+VL+  KL V L+A+RSKL+FE                  VERAIIV+EA  KDP Q
Sbjct: 1164 QQIRVLNRQKLTVSLEAERSKLEFESWALQNKLKDVVVKGIKQVERAIIVDEANGKDPNQ 1223

Query: 56   NKRLKLLVEGTGLLSVIG 3
             K+LKL+VEGTG LSV+G
Sbjct: 1224 RKKLKLVVEGTGFLSVLG 1241


>ref|XP_006365151.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like isoform
            X1 [Solanum tuberosum]
          Length = 1394

 Score =  337 bits (863), Expect = 1e-89
 Identities = 200/379 (52%), Positives = 244/379 (64%), Gaps = 2/379 (0%)
 Frame = -2

Query: 1133 RNASACIVQFVYGGDAMDPAQMEEKSGLPLNFERLFMKAKATCPATDQKSLTTEEIKEIV 954
            RNASACIVQF+YG D MDP+QMEEK G PLNF RLFMK KATCP   +KSL+  EI EIV
Sbjct: 883  RNASACIVQFMYGDDGMDPSQMEEKKGRPLNFSRLFMKVKATCPPGGEKSLSYSEICEIV 942

Query: 953  NKTVERRLLNSTMTFEGGCSQSLPSSDTPFKDGCLEAFAQSIRNFIEKKCPSSILKLKLS 774
            N+    RL    MT EGGCS++  SS     D  ++  A++++N  E         L L 
Sbjct: 943  NE----RLSYHDMTPEGGCSEAFRSS---LSDFLIKNLAETLKNLRES--------LLLG 987

Query: 773  EGVYSEEDRSYLKNVDSNVSGITQRQLMVFLETCISRYHSKKXXXXXXXXXXXXXXXGEP 594
            E  Y  +DR YL+ +  N+SGIT+RQL VFL TCISRYH K+               GEP
Sbjct: 988  EEQYEGDDRGYLEKIALNISGITKRQLQVFLNTCISRYHLKRLEAGTAIGAIGAQSIGEP 1047

Query: 593  GTQMTLKTFHFAGVASMNVTLGVPRXXXXXXXXXXXNTPIITTVLQCDNNDIIAKLVKGR 414
            GTQMTLKTFHFAGVASMNVTLGVPR            TPIITT L    N   A+++K R
Sbjct: 1048 GTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAKKITTPIITTKLLSAANLTAARMIKAR 1107

Query: 413  IERTLLEQVAKSIKTSQASRLASIVITLDMRRIQGAQLSIDAYSVKESILRTPKMKLKEQ 234
            IE+TLL QVAKS+K   ASRLASI I+LDM  IQ +QL IDAY+VK+SIL+T K+KLKE 
Sbjct: 1108 IEKTLLGQVAKSVKIVLASRLASIAISLDMETIQVSQLCIDAYTVKQSILQTSKIKLKEH 1167

Query: 233  QIKVLHAGKLEVILQADRSKLQFELHXXXXXXXXXXXXXXXXVERAIIVNEAKE--KDPG 60
            QIKVL+  KLEV  QA++ KL FELH                V+RA++  E ++  K+  
Sbjct: 1168 QIKVLNPRKLEVFPQANKDKLHFELHRLKNKLPAVVVKGITTVQRAVVNKEQQKDRKNDV 1227

Query: 59   QNKRLKLLVEGTGLLSVIG 3
            + +  +LLVEGTGLL+V+G
Sbjct: 1228 KGETYELLVEGTGLLAVMG 1246


>ref|XP_004251448.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 [Solanum
            lycopersicum]
          Length = 1390

 Score =  332 bits (852), Expect = 3e-88
 Identities = 196/379 (51%), Positives = 244/379 (64%), Gaps = 2/379 (0%)
 Frame = -2

Query: 1133 RNASACIVQFVYGGDAMDPAQMEEKSGLPLNFERLFMKAKATCPATDQKSLTTEEIKEIV 954
            RNASACIVQF+YG D MDP++MEEK G PLNF RLFMK KATCP   +KSL+  EI EIV
Sbjct: 883  RNASACIVQFMYGDDGMDPSRMEEKKGRPLNFSRLFMKVKATCPPGGEKSLSYSEICEIV 942

Query: 953  NKTVERRLLNSTMTFEGGCSQSLPSSDTPFKDGCLEAFAQSIRNFIEKKCPSSILKLKLS 774
            N+    RL    MT EGGCS++  +S     D  +++ A++++N  E         L L 
Sbjct: 943  NE----RLSYHDMTPEGGCSEAFRAS---LSDFLIKSLAETLKNLRES--------LLLG 987

Query: 773  EGVYSEEDRSYLKNVDSNVSGITQRQLMVFLETCISRYHSKKXXXXXXXXXXXXXXXGEP 594
            E  Y  +DR YL+ +  N+SGIT++QL VFL TCISRYH K+               GEP
Sbjct: 988  EEQYEGDDRGYLEKIVLNISGITKKQLQVFLNTCISRYHLKRLEAGTAIGAIGAQSIGEP 1047

Query: 593  GTQMTLKTFHFAGVASMNVTLGVPRXXXXXXXXXXXNTPIITTVLQCDNNDIIAKLVKGR 414
            GTQMTLKTFHFAGVASMNVTLGVPR            TPIIT  L    N   A+++K R
Sbjct: 1048 GTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAKKITTPIITAKLLSAGNLTAARMIKAR 1107

Query: 413  IERTLLEQVAKSIKTSQASRLASIVITLDMRRIQGAQLSIDAYSVKESILRTPKMKLKEQ 234
            IE+TLL QVAKS+K   ASRLASI I+LDM  IQ +QL IDAY+VK+SIL+T K+KLKE 
Sbjct: 1108 IEKTLLGQVAKSVKIVLASRLASIAISLDMETIQVSQLCIDAYTVKQSILQTSKIKLKEH 1167

Query: 233  QIKVLHAGKLEVILQADRSKLQFELHXXXXXXXXXXXXXXXXVERAIIVNEAKE--KDPG 60
            QIKVL+  KLEV  QA++ KL FELH                V+RA++  E ++  K+  
Sbjct: 1168 QIKVLNPRKLEVFPQANKDKLHFELHRLKNKLPAVVVKGITTVQRAVVNKEQQKDRKNDV 1227

Query: 59   QNKRLKLLVEGTGLLSVIG 3
            + +  +LLVEGTGLL+V+G
Sbjct: 1228 KGETYELLVEGTGLLAVMG 1246


>ref|XP_009800353.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 [Nicotiana
            sylvestris] gi|698510366|ref|XP_009800354.1| PREDICTED:
            DNA-directed RNA polymerase III subunit rpc1 [Nicotiana
            sylvestris]
          Length = 1390

 Score =  330 bits (847), Expect = 1e-87
 Identities = 200/384 (52%), Positives = 244/384 (63%), Gaps = 7/384 (1%)
 Frame = -2

Query: 1133 RNASACIVQFVYGGDAMDPAQMEEKSGLPLNFERLFMKAKATCPATDQKSLTTEEIKEIV 954
            RNASA I+QF+YG D MDP+QMEEK G PLNF RLFMK KATCP   +K L+  EI EIV
Sbjct: 884  RNASASIIQFMYGDDGMDPSQMEEKKGRPLNFSRLFMKVKATCPPRGEKGLSYSEICEIV 943

Query: 953  NKTVERRLLNSTMTFEGGCSQSLPSSDTPFKDGCLEAFAQSIRNFIEKKCPSSILKLK-- 780
            N+    RL    M+ EGGCS               EAF  S+ +F+ K    ++ +L+  
Sbjct: 944  NE----RLSYHDMSPEGGCS---------------EAFRASLSDFLIKNLAETLKRLREA 984

Query: 779  --LSEGVYSEEDRSYLKNVDSNVSGITQRQLMVFLETCISRYHSKKXXXXXXXXXXXXXX 606
              L E  Y+  DR YL+NV  N+SGIT++QL VFL  CISRYH K+              
Sbjct: 985  LLLGEEQYAGGDREYLENVALNISGITKKQLQVFLNMCISRYHLKRLESGTAIGAIGAQS 1044

Query: 605  XGEPGTQMTLKTFHFAGVASMNVTLGVPRXXXXXXXXXXXNTPIITTVLQCDNNDIIAKL 426
             GEPGTQMTLKTFHFAGVASMNVTLGVPR           NTPIIT  L    N   A++
Sbjct: 1045 IGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAKKINTPIITAKLLSAANLTAARM 1104

Query: 425  VKGRIERTLLEQVAKSIKTSQASRLASIVITLDMRRIQGAQLSIDAYSVKESILRTPKMK 246
            +K RIE+TLL QVAKS+K   ASRLASI ITLDM  IQ +QL IDAY+VK+SIL+TPK+K
Sbjct: 1105 IKARIEKTLLGQVAKSVKIVMASRLASIAITLDMETIQVSQLCIDAYTVKQSILQTPKIK 1164

Query: 245  LKEQQIKVLHAGKLEVILQADRSKLQFELHXXXXXXXXXXXXXXXXVERAIIVNEAKEKD 66
            LKEQQ+KVL+  KLEV  QA++ KL FELH                V+RA +VN+ +E+D
Sbjct: 1165 LKEQQVKVLNPRKLEVFPQANKDKLHFELHRLKNKLPAVVVKGITTVQRA-VVNKEQERD 1223

Query: 65   ---PGQNKRLKLLVEGTGLLSVIG 3
                 + +  +LLVEGTGLL+V+G
Sbjct: 1224 RKSDVKGETYELLVEGTGLLAVMG 1247


>ref|XP_009610319.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 isoform X2
            [Nicotiana tomentosiformis]
            gi|697112874|ref|XP_009610320.1| PREDICTED: DNA-directed
            RNA polymerase III subunit rpc1 isoform X2 [Nicotiana
            tomentosiformis]
          Length = 1375

 Score =  327 bits (837), Expect = 1e-86
 Identities = 198/384 (51%), Positives = 243/384 (63%), Gaps = 7/384 (1%)
 Frame = -2

Query: 1133 RNASACIVQFVYGGDAMDPAQMEEKSGLPLNFERLFMKAKATCPATDQKSLTTEEIKEIV 954
            RNAS  I+QF+YG D MDP+QMEEK G PLNF RLFMK KATCP   +KSL+  EI EIV
Sbjct: 884  RNASTSIIQFMYGDDGMDPSQMEEKKGRPLNFSRLFMKVKATCPPRGEKSLSYSEICEIV 943

Query: 953  NKTVERRLLNSTMTFEGGCSQSLPSSDTPFKDGCLEAFAQSIRNFIEKKCPSSILKLK-- 780
            N+    RL    M+ EGGCS               EAF  S+ +F+ K    ++ +L+  
Sbjct: 944  NE----RLSYHDMSPEGGCS---------------EAFRASLSDFLIKHLAETLKRLREA 984

Query: 779  --LSEGVYSEEDRSYLKNVDSNVSGITQRQLMVFLETCISRYHSKKXXXXXXXXXXXXXX 606
              L    Y+  DR YL+N+  N+SGIT++QL VFL  CISRYH K+              
Sbjct: 985  LLLDGEQYAGGDREYLENIALNISGITKKQLQVFLNMCISRYHLKRLESGTAIGAIGAQS 1044

Query: 605  XGEPGTQMTLKTFHFAGVASMNVTLGVPRXXXXXXXXXXXNTPIITTVLQCDNNDIIAKL 426
             GEPGTQMTLKTFHFAGVASMNVTLGVPR           NTPIIT  L    N   A++
Sbjct: 1045 IGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAKKINTPIITAKLLSAANLTAARM 1104

Query: 425  VKGRIERTLLEQVAKSIKTSQASRLASIVITLDMRRIQGAQLSIDAYSVKESILRTPKMK 246
            +K RIE+TLL QVAKS+K   ASRLASI ITLDM  IQ +QL IDAY+VK+SIL+TPK+K
Sbjct: 1105 IKARIEKTLLGQVAKSVKIVMASRLASIAITLDMETIQVSQLCIDAYTVKQSILQTPKIK 1164

Query: 245  LKEQQIKVLHAGKLEVILQADRSKLQFELHXXXXXXXXXXXXXXXXVERAIIVNEAKEKD 66
            LKEQQ+KVL+  KLEV  QA++ KL FELH                V+RA +VN+ +E+D
Sbjct: 1165 LKEQQVKVLNHRKLEVFPQANKDKLHFELHRLKNKLPVVVVKGITTVQRA-VVNKEQERD 1223

Query: 65   ---PGQNKRLKLLVEGTGLLSVIG 3
                 + +  +LLVEGTGLL+V+G
Sbjct: 1224 RKSDVKGETYELLVEGTGLLAVMG 1247


>ref|XP_009610317.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 isoform X1
            [Nicotiana tomentosiformis]
            gi|697112870|ref|XP_009610318.1| PREDICTED: DNA-directed
            RNA polymerase III subunit rpc1 isoform X1 [Nicotiana
            tomentosiformis]
          Length = 1390

 Score =  327 bits (837), Expect = 1e-86
 Identities = 198/384 (51%), Positives = 243/384 (63%), Gaps = 7/384 (1%)
 Frame = -2

Query: 1133 RNASACIVQFVYGGDAMDPAQMEEKSGLPLNFERLFMKAKATCPATDQKSLTTEEIKEIV 954
            RNAS  I+QF+YG D MDP+QMEEK G PLNF RLFMK KATCP   +KSL+  EI EIV
Sbjct: 884  RNASTSIIQFMYGDDGMDPSQMEEKKGRPLNFSRLFMKVKATCPPRGEKSLSYSEICEIV 943

Query: 953  NKTVERRLLNSTMTFEGGCSQSLPSSDTPFKDGCLEAFAQSIRNFIEKKCPSSILKLK-- 780
            N+    RL    M+ EGGCS               EAF  S+ +F+ K    ++ +L+  
Sbjct: 944  NE----RLSYHDMSPEGGCS---------------EAFRASLSDFLIKHLAETLKRLREA 984

Query: 779  --LSEGVYSEEDRSYLKNVDSNVSGITQRQLMVFLETCISRYHSKKXXXXXXXXXXXXXX 606
              L    Y+  DR YL+N+  N+SGIT++QL VFL  CISRYH K+              
Sbjct: 985  LLLDGEQYAGGDREYLENIALNISGITKKQLQVFLNMCISRYHLKRLESGTAIGAIGAQS 1044

Query: 605  XGEPGTQMTLKTFHFAGVASMNVTLGVPRXXXXXXXXXXXNTPIITTVLQCDNNDIIAKL 426
             GEPGTQMTLKTFHFAGVASMNVTLGVPR           NTPIIT  L    N   A++
Sbjct: 1045 IGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAKKINTPIITAKLLSAANLTAARM 1104

Query: 425  VKGRIERTLLEQVAKSIKTSQASRLASIVITLDMRRIQGAQLSIDAYSVKESILRTPKMK 246
            +K RIE+TLL QVAKS+K   ASRLASI ITLDM  IQ +QL IDAY+VK+SIL+TPK+K
Sbjct: 1105 IKARIEKTLLGQVAKSVKIVMASRLASIAITLDMETIQVSQLCIDAYTVKQSILQTPKIK 1164

Query: 245  LKEQQIKVLHAGKLEVILQADRSKLQFELHXXXXXXXXXXXXXXXXVERAIIVNEAKEKD 66
            LKEQQ+KVL+  KLEV  QA++ KL FELH                V+RA +VN+ +E+D
Sbjct: 1165 LKEQQVKVLNHRKLEVFPQANKDKLHFELHRLKNKLPVVVVKGITTVQRA-VVNKEQERD 1223

Query: 65   ---PGQNKRLKLLVEGTGLLSVIG 3
                 + +  +LLVEGTGLL+V+G
Sbjct: 1224 RKSDVKGETYELLVEGTGLLAVMG 1247


>ref|XP_010092991.1| DNA-directed RNA polymerase III subunit RPC1 [Morus notabilis]
            gi|587863463|gb|EXB53229.1| DNA-directed RNA polymerase
            III subunit RPC1 [Morus notabilis]
          Length = 1179

 Score =  325 bits (832), Expect = 6e-86
 Identities = 194/378 (51%), Positives = 242/378 (64%), Gaps = 1/378 (0%)
 Frame = -2

Query: 1133 RNASACIVQFVYGGDAMDPAQMEEKSGLPLNFERLFMKAKATCPATDQKSLTTEEIKEIV 954
            RNASACI+QF YG D MDPA ME K+G PLNFERLF+KAKATCPA   + L+ E++ E+V
Sbjct: 674  RNASACIIQFCYGDDGMDPAHMEGKNGAPLNFERLFLKAKATCPAGGTEKLSPEKVSELV 733

Query: 953  NKTVERRLLNSTMTFEGGCSQSLPSSDTPFKDGCLEAFAQSIRNFIEKKCPSSILKLKLS 774
                E RL    MT EGGCS +  +S   F D  ++AF ++        C S+       
Sbjct: 734  ----ESRLSKKDMTPEGGCSAAFKNSLKSFLDNYVKAFKRTW-----DPCEST------- 777

Query: 773  EGVYSEEDRSYLKNVDSNVSGITQRQLMVFLETCISRYHSKKXXXXXXXXXXXXXXXGEP 594
            EG    E+ +  KN+   +SG T RQL VFL+TCISRYHSKK               GEP
Sbjct: 778  EGHAKMENSATTKNIVLQLSGATARQLEVFLDTCISRYHSKKIEAGTAIGAIGAQSIGEP 837

Query: 593  GTQMTLKTFHFAGVASMNVTLGVPRXXXXXXXXXXXNTPIITTVLQCDNNDIIAKLVKGR 414
            GTQMTLKTFHFAGVASMNVTLGVPR           +TPIIT +L+CDNN   A++V+GR
Sbjct: 838  GTQMTLKTFHFAGVASMNVTLGVPRIKEIINGAKKISTPIITAILECDNNVNFARIVRGR 897

Query: 413  IERTLLEQVAKSIKTSQASRLASIVITLDMRRIQGAQLSIDAYSVKESILRTPKMKLKEQ 234
            IE+  L QVAKSIKT   SR+AS+VITLDM RIQ A LSIDA  V++SIL+TP++KLK++
Sbjct: 898  IEKISLGQVAKSIKTVMTSRVASVVITLDMERIQDALLSIDANVVRDSILQTPRIKLKKE 957

Query: 233  QIKVLHAGKLEVI-LQADRSKLQFELHXXXXXXXXXXXXXXXXVERAIIVNEAKEKDPGQ 57
             I+VL   KLE++  +++RSKL   L                 VERA+I +E K+K    
Sbjct: 958  HIRVLDFKKLEILPYESNRSKLYHHLQFLAKMLQNILVKGIKTVERAVISSE-KDKKTDI 1016

Query: 56   NKRLKLLVEGTGLLSVIG 3
            +K+ KLLVEGTGLL V+G
Sbjct: 1017 SKKYKLLVEGTGLLGVMG 1034


>ref|XP_006365152.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like isoform
            X2 [Solanum tuberosum]
          Length = 1243

 Score =  325 bits (832), Expect = 6e-86
 Identities = 194/371 (52%), Positives = 236/371 (63%), Gaps = 2/371 (0%)
 Frame = -2

Query: 1133 RNASACIVQFVYGGDAMDPAQMEEKSGLPLNFERLFMKAKATCPATDQKSLTTEEIKEIV 954
            RNASACIVQF+YG D MDP+QMEEK G PLNF RLFMK KATCP   +KSL+  EI EIV
Sbjct: 883  RNASACIVQFMYGDDGMDPSQMEEKKGRPLNFSRLFMKVKATCPPGGEKSLSYSEICEIV 942

Query: 953  NKTVERRLLNSTMTFEGGCSQSLPSSDTPFKDGCLEAFAQSIRNFIEKKCPSSILKLKLS 774
            N+    RL    MT EGGCS++  SS     D  ++  A++++N  E         L L 
Sbjct: 943  NE----RLSYHDMTPEGGCSEAFRSS---LSDFLIKNLAETLKNLRES--------LLLG 987

Query: 773  EGVYSEEDRSYLKNVDSNVSGITQRQLMVFLETCISRYHSKKXXXXXXXXXXXXXXXGEP 594
            E  Y  +DR YL+ +  N+SGIT+RQL VFL TCISRYH K+               GEP
Sbjct: 988  EEQYEGDDRGYLEKIALNISGITKRQLQVFLNTCISRYHLKRLEAGTAIGAIGAQSIGEP 1047

Query: 593  GTQMTLKTFHFAGVASMNVTLGVPRXXXXXXXXXXXNTPIITTVLQCDNNDIIAKLVKGR 414
            GTQMTLKTFHFAGVASMNVTLGVPR            TPIITT L    N   A+++K R
Sbjct: 1048 GTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAKKITTPIITTKLLSAANLTAARMIKAR 1107

Query: 413  IERTLLEQVAKSIKTSQASRLASIVITLDMRRIQGAQLSIDAYSVKESILRTPKMKLKEQ 234
            IE+TLL QVAKS+K   ASRLASI I+LDM  IQ +QL IDAY+VK+SIL+T K+KLKE 
Sbjct: 1108 IEKTLLGQVAKSVKIVLASRLASIAISLDMETIQVSQLCIDAYTVKQSILQTSKIKLKEH 1167

Query: 233  QIKVLHAGKLEVILQADRSKLQFELHXXXXXXXXXXXXXXXXVERAIIVNEAKE--KDPG 60
            QIKVL+  KLEV  QA++ KL FELH                V+RA++  E ++  K+  
Sbjct: 1168 QIKVLNPRKLEVFPQANKDKLHFELHRLKNKLPAVVVKGITTVQRAVVNKEQQKDRKNDV 1227

Query: 59   QNKRLKLLVEG 27
            + +  +LLVEG
Sbjct: 1228 KGETYELLVEG 1238


>ref|XP_006488216.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like isoform
            X1 [Citrus sinensis] gi|568870034|ref|XP_006488217.1|
            PREDICTED: DNA-directed RNA polymerase III subunit
            rpc1-like isoform X2 [Citrus sinensis]
          Length = 1404

 Score =  310 bits (794), Expect = 1e-81
 Identities = 180/381 (47%), Positives = 227/381 (59%), Gaps = 4/381 (1%)
 Frame = -2

Query: 1133 RNASACIVQFVYGGDAMDPAQMEEKSGLPLNFERLFMKAKATCPATDQKSLTTEEIKEIV 954
            RNA  CIVQF+YG D MDPA ME KSG PLNF+RL MK KATCP   Q+ L+ +++ EIV
Sbjct: 901  RNAGGCIVQFLYGDDGMDPANMEGKSGEPLNFDRLLMKVKATCPPAGQRYLSPQQVSEIV 960

Query: 953  NKTVERRLLNSTMTFEGGCSQSLPSSDTPFKDGCLEAFAQSIRNFIEKKCPSSILKLKLS 774
             K +                          K+ C EAF  S+R F E +      K+K  
Sbjct: 961  EKQLAAY----------------------GKESCSEAFLNSLRKFFEGQQDKLDKKIKFV 998

Query: 773  EGVYSEEDRSYLKNVDSNVSGITQRQLMVFLETCISRYHSKKXXXXXXXXXXXXXXXGEP 594
            E +  ++    L+ V    SGIT++QL VF++TC SRYH K+               GEP
Sbjct: 999  EDIGWDDKSQILEEVTHKTSGITEKQLEVFIQTCFSRYHVKRVEAGTAIGAIGAQSIGEP 1058

Query: 593  GTQMTLKTFHFAGVASMNVTLGVPRXXXXXXXXXXXNTPIITTVLQCDNNDIIAKLVKGR 414
            GTQMTLKTFHFAGVASMN+T GVPR           +TPIIT  L+C++N+  A++VKGR
Sbjct: 1059 GTQMTLKTFHFAGVASMNITQGVPRIKEIINGAKRISTPIITAELECNDNENAARVVKGR 1118

Query: 413  IERTLLEQVAKSIKTSQASRLASIVITLDMRRIQGAQLSIDAYSVKESILRTPKMKLKEQ 234
            IE+TLL QVAKSIK    SRLASIVI LDM  IQ A L I+A  VKESI++TPK+KLK+Q
Sbjct: 1119 IEKTLLGQVAKSIKIVMTSRLASIVIALDMETIQDAHLCINADIVKESIVQTPKIKLKQQ 1178

Query: 233  QIKVLHAGKLEVILQADRSKLQFELHXXXXXXXXXXXXXXXXVERAIIVNEAKE----KD 66
             IKVL   KLE+    D+SK+ FEL+                VER +I  + KE    K+
Sbjct: 1179 HIKVLDFRKLEIFPPVDKSKIHFELYSLKNVLPMVIVKGIKTVERVVIAEKEKEKRKVKE 1238

Query: 65   PGQNKRLKLLVEGTGLLSVIG 3
             G+ K+ +LLVEGTGL +V+G
Sbjct: 1239 NGEKKKYRLLVEGTGLQAVMG 1259


>ref|XP_006424701.1| hypothetical protein CICLE_v10027681mg [Citrus clementina]
            gi|557526635|gb|ESR37941.1| hypothetical protein
            CICLE_v10027681mg [Citrus clementina]
          Length = 1397

 Score =  310 bits (794), Expect = 1e-81
 Identities = 180/381 (47%), Positives = 227/381 (59%), Gaps = 4/381 (1%)
 Frame = -2

Query: 1133 RNASACIVQFVYGGDAMDPAQMEEKSGLPLNFERLFMKAKATCPATDQKSLTTEEIKEIV 954
            RNA  CIVQF+YG D MDPA ME KSG PLNF+RL MK KATCP   Q+ L+ +++ EIV
Sbjct: 894  RNAGGCIVQFLYGDDGMDPANMEGKSGEPLNFDRLLMKVKATCPPAGQRYLSPQQVSEIV 953

Query: 953  NKTVERRLLNSTMTFEGGCSQSLPSSDTPFKDGCLEAFAQSIRNFIEKKCPSSILKLKLS 774
             K +                          K+ C EAF  S+R F E +      K+K  
Sbjct: 954  EKQLAAY----------------------GKESCSEAFLNSLRKFFEGQQDKLDKKIKFV 991

Query: 773  EGVYSEEDRSYLKNVDSNVSGITQRQLMVFLETCISRYHSKKXXXXXXXXXXXXXXXGEP 594
            E +  ++    L+ V    SGIT++QL VF++TC SRYH K+               GEP
Sbjct: 992  EDIGWDDKSQILEEVTHKTSGITEKQLEVFIQTCFSRYHVKRVEAGTAIGAIGAQSIGEP 1051

Query: 593  GTQMTLKTFHFAGVASMNVTLGVPRXXXXXXXXXXXNTPIITTVLQCDNNDIIAKLVKGR 414
            GTQMTLKTFHFAGVASMN+T GVPR           +TPIIT  L+C++N+  A++VKGR
Sbjct: 1052 GTQMTLKTFHFAGVASMNITQGVPRIKEIINGAKRISTPIITAELECNDNENAARVVKGR 1111

Query: 413  IERTLLEQVAKSIKTSQASRLASIVITLDMRRIQGAQLSIDAYSVKESILRTPKMKLKEQ 234
            IE+TLL QVAKSIK    SRLASIVI LDM  IQ A L I+A  VKESI++TPK+KLK+Q
Sbjct: 1112 IEKTLLGQVAKSIKIVMTSRLASIVIALDMETIQDAHLCINADIVKESIVQTPKIKLKQQ 1171

Query: 233  QIKVLHAGKLEVILQADRSKLQFELHXXXXXXXXXXXXXXXXVERAIIVNEAKE----KD 66
             IKVL   KLE+    D+SK+ FEL+                VER +I  + KE    K+
Sbjct: 1172 HIKVLDFRKLEIFPPVDKSKIHFELYSLKNVLPMVIVKGIKTVERVVIAEKEKEKRKVKE 1231

Query: 65   PGQNKRLKLLVEGTGLLSVIG 3
             G+ K+ +LLVEGTGL +V+G
Sbjct: 1232 NGEKKKYRLLVEGTGLQAVMG 1252


>gb|KDO73040.1| hypothetical protein CISIN_1g000828mg [Citrus sinensis]
            gi|641854233|gb|KDO73041.1| hypothetical protein
            CISIN_1g000828mg [Citrus sinensis]
          Length = 1265

 Score =  307 bits (786), Expect = 1e-80
 Identities = 179/381 (46%), Positives = 226/381 (59%), Gaps = 4/381 (1%)
 Frame = -2

Query: 1133 RNASACIVQFVYGGDAMDPAQMEEKSGLPLNFERLFMKAKATCPATDQKSLTTEEIKEIV 954
            RNA  CIVQF+YG D MDPA ME KSG PLNF+RL MK KATCP   Q+ L+ +++ EIV
Sbjct: 762  RNAGGCIVQFLYGDDGMDPANMEGKSGEPLNFDRLLMKVKATCPPAGQRYLSPQQVSEIV 821

Query: 953  NKTVERRLLNSTMTFEGGCSQSLPSSDTPFKDGCLEAFAQSIRNFIEKKCPSSILKLKLS 774
             K +                          K+ C EAF  S+R F E +      K+K  
Sbjct: 822  EKQLAAY----------------------GKESCSEAFLNSLRKFFEGQQDKLDKKIKFV 859

Query: 773  EGVYSEEDRSYLKNVDSNVSGITQRQLMVFLETCISRYHSKKXXXXXXXXXXXXXXXGEP 594
            E +  ++    L+ V    SGIT++QL VF++TC SRY  K+               GEP
Sbjct: 860  EDIGWDDKSQILEEVTHKTSGITEKQLEVFIQTCFSRYRVKRVEAGTAIGAIGAQSIGEP 919

Query: 593  GTQMTLKTFHFAGVASMNVTLGVPRXXXXXXXXXXXNTPIITTVLQCDNNDIIAKLVKGR 414
            GTQMTLKTFHFAGVASMN+T GVPR           +TPIIT  L+C++N+  A++VKGR
Sbjct: 920  GTQMTLKTFHFAGVASMNITQGVPRIKEIINGAKRISTPIITAELECNDNENAARVVKGR 979

Query: 413  IERTLLEQVAKSIKTSQASRLASIVITLDMRRIQGAQLSIDAYSVKESILRTPKMKLKEQ 234
            IE+TLL QVAKSIK    SRLASIVI LDM  IQ A L I+A  VKESI++TPK+KLK+Q
Sbjct: 980  IEKTLLGQVAKSIKIVMTSRLASIVIALDMETIQDAHLCINADIVKESIVQTPKIKLKQQ 1039

Query: 233  QIKVLHAGKLEVILQADRSKLQFELHXXXXXXXXXXXXXXXXVERAIIVNEAKE----KD 66
             IKVL   KLE+    D+SK+ FEL+                VER +I  + KE    K+
Sbjct: 1040 HIKVLDFRKLEIFPPVDKSKIHFELYSLKNVLPMVIVKGIKTVERVVIAEKEKEKRKVKE 1099

Query: 65   PGQNKRLKLLVEGTGLLSVIG 3
             G+ K+ +LLVEGTGL +V+G
Sbjct: 1100 NGEKKKYRLLVEGTGLQAVMG 1120


>ref|XP_008358068.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 isoform X2
            [Malus domestica]
          Length = 1390

 Score =  305 bits (781), Expect = 5e-80
 Identities = 189/385 (49%), Positives = 231/385 (60%), Gaps = 8/385 (2%)
 Frame = -2

Query: 1133 RNASACIVQFVYGGDAMDPAQMEEK-SGLPLNFERLFMKAKATCPATDQKSLTTEEIKEI 957
            RN+S  IVQF YG D MDPA ME K SG PL+F RLF+KAKATCPA    +L+ EE+ EI
Sbjct: 894  RNSSGSIVQFCYGDDGMDPAMMEGKESGAPLDFNRLFLKAKATCPAGGSDTLSXEEVSEI 953

Query: 956  VNKTVERRLLNSTMTFEGGCSQSLPSSDTPFKDGCLEAFAQSIRNFIEKKCPSSILKLKL 777
            V+     RL    MT +GGC+    +S   F D  ++ F ++   F+  + P+       
Sbjct: 954  VSS----RLSKHDMTPDGGCAAGFKTSLEKFLDKFVKTFRETHETFVLDQNPAW------ 1003

Query: 776  SEGVYSEEDRSYLKNVDSNVSGITQRQLMVFLETCISRYHSKKXXXXXXXXXXXXXXXGE 597
                  +E  + L  +  N+SG+T +QL VFL+TCISRYHSKK               GE
Sbjct: 1004 ------KEKSATLDKIVQNISGVTSQQLKVFLDTCISRYHSKKVEAGTAIGVIGAQSIGE 1057

Query: 596  PGTQMTLKTFHFAGVASMNVTLGVPRXXXXXXXXXXXNTPIITTVLQCDNNDIIAKLVKG 417
            PGTQMTLKTFHFAGVASMNVTLGVPR           +TPIIT VL+ D N   A+LV G
Sbjct: 1058 PGTQMTLKTFHFAGVASMNVTLGVPRIKEIINGAKKISTPIITAVLEWDTNAKFARLVAG 1117

Query: 416  RIERTLLEQVAKSIKTSQASRLASIVITLDMRRIQGAQLSIDAYSVKESILRTPKMKLKE 237
            RIE+T L QVAKSIKT   SR ASIVITLDM  IQ A LSIDA  VKESILRTP++KLK 
Sbjct: 1118 RIEKTNLGQVAKSIKTVMTSRAASIVITLDMVMIQDAHLSIDANVVKESILRTPRIKLKS 1177

Query: 236  QQIKVLHAGKLEVILQ-ADRSKLQFELHXXXXXXXXXXXXXXXXVERAIIVNEAKEKD-- 66
            + I+VL   KLE++ Q ADRS+L F L                 V+R +I  E  +K+  
Sbjct: 1178 EHIRVLDIRKLEILPQEADRSRLYFHLDYLKSMLPKVIVRGVGTVQRVVINEEKXKKEKN 1237

Query: 65   ----PGQNKRLKLLVEGTGLLSVIG 3
                 G  K+ KL  EGTGLL+V+G
Sbjct: 1238 DIEVKGDEKKYKLFAEGTGLLAVMG 1262


>ref|XP_008358064.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 isoform X1
            [Malus domestica]
          Length = 1419

 Score =  305 bits (781), Expect = 5e-80
 Identities = 189/385 (49%), Positives = 231/385 (60%), Gaps = 8/385 (2%)
 Frame = -2

Query: 1133 RNASACIVQFVYGGDAMDPAQMEEK-SGLPLNFERLFMKAKATCPATDQKSLTTEEIKEI 957
            RN+S  IVQF YG D MDPA ME K SG PL+F RLF+KAKATCPA    +L+ EE+ EI
Sbjct: 894  RNSSGSIVQFCYGDDGMDPAMMEGKESGAPLDFNRLFLKAKATCPAGGSDTLSXEEVSEI 953

Query: 956  VNKTVERRLLNSTMTFEGGCSQSLPSSDTPFKDGCLEAFAQSIRNFIEKKCPSSILKLKL 777
            V+     RL    MT +GGC+    +S   F D  ++ F ++   F+  + P+       
Sbjct: 954  VSS----RLSKHDMTPDGGCAAGFKTSLEKFLDKFVKTFRETHETFVLDQNPAW------ 1003

Query: 776  SEGVYSEEDRSYLKNVDSNVSGITQRQLMVFLETCISRYHSKKXXXXXXXXXXXXXXXGE 597
                  +E  + L  +  N+SG+T +QL VFL+TCISRYHSKK               GE
Sbjct: 1004 ------KEKSATLDKIVQNISGVTSQQLKVFLDTCISRYHSKKVEAGTAIGVIGAQSIGE 1057

Query: 596  PGTQMTLKTFHFAGVASMNVTLGVPRXXXXXXXXXXXNTPIITTVLQCDNNDIIAKLVKG 417
            PGTQMTLKTFHFAGVASMNVTLGVPR           +TPIIT VL+ D N   A+LV G
Sbjct: 1058 PGTQMTLKTFHFAGVASMNVTLGVPRIKEIINGAKKISTPIITAVLEWDTNAKFARLVAG 1117

Query: 416  RIERTLLEQVAKSIKTSQASRLASIVITLDMRRIQGAQLSIDAYSVKESILRTPKMKLKE 237
            RIE+T L QVAKSIKT   SR ASIVITLDM  IQ A LSIDA  VKESILRTP++KLK 
Sbjct: 1118 RIEKTNLGQVAKSIKTVMTSRAASIVITLDMVMIQDAHLSIDANVVKESILRTPRIKLKS 1177

Query: 236  QQIKVLHAGKLEVILQ-ADRSKLQFELHXXXXXXXXXXXXXXXXVERAIIVNEAKEKD-- 66
            + I+VL   KLE++ Q ADRS+L F L                 V+R +I  E  +K+  
Sbjct: 1178 EHIRVLDIRKLEILPQEADRSRLYFHLDYLKSMLPKVIVRGVGTVQRVVINEEKXKKEKN 1237

Query: 65   ----PGQNKRLKLLVEGTGLLSVIG 3
                 G  K+ KL  EGTGLL+V+G
Sbjct: 1238 DIEVKGDEKKYKLFAEGTGLLAVMG 1262


>ref|XP_008222562.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 [Prunus mume]
          Length = 1425

 Score =  303 bits (775), Expect = 2e-79
 Identities = 186/390 (47%), Positives = 231/390 (59%), Gaps = 13/390 (3%)
 Frame = -2

Query: 1133 RNASACIVQFVYGGDAMDPAQMEEKSGLPLNFERLFMKAKATCPATDQKSLTTEEIKEIV 954
            RNAS CIVQF YG D MDPA ME + G PL+F RLF+KAKATCPA + +SL+ EE+ EIV
Sbjct: 896  RNASGCIVQFCYGDDGMDPAMMEGEGGAPLDFRRLFLKAKATCPAGENESLSLEEVSEIV 955

Query: 953  NKTVERRLLNSTMTFEGGCSQSLPSSDTPFKDGCLEAFAQSIRNFIEKKCPSSILKLKLS 774
                  RL    MT + GCS    SS   F D   +   ++   F+  + P+        
Sbjct: 956  KD----RLSKQDMTPDRGCSAGFKSSLEEFLDKYAKELRKTHDTFVLDQSPAW------- 1004

Query: 773  EGVYSEEDRSYLKNVDSNVSGITQRQLMVFLETCISRYHSKKXXXXXXXXXXXXXXXGEP 594
                 +E  + L+ +  N+SG+T +QL VFL TCISRYHSKK               GEP
Sbjct: 1005 -----KEKSASLEKIVQNISGVTCKQLEVFLNTCISRYHSKKVEAGTAIGVIGAQSIGEP 1059

Query: 593  GTQMTLKTFHFAGVASMNVTLGVPRXXXXXXXXXXXNTPIITTVLQCDNNDIIAKLVKGR 414
            GTQMTLKTFHFAGVASMNVTLGVPR           +TPI+T +L+ +NN   A++V GR
Sbjct: 1060 GTQMTLKTFHFAGVASMNVTLGVPRIKEIINGAKKISTPIVTAILEHNNNAKFARVVAGR 1119

Query: 413  IERTLLEQVAKSIKTSQASRLASIVITLDMRRIQGAQLSIDAYSVKESILRTPKMKLKEQ 234
            IE+T+L QV+KSIK    SR ASIVITLDM  IQ A LSIDA  VKESILRTP++KLK++
Sbjct: 1120 IEKTMLGQVSKSIKIVMTSRSASIVITLDMVMIQDAHLSIDANVVKESILRTPRIKLKQE 1179

Query: 233  QIKVLHAGKLEVILQ-ADRSKLQFELHXXXXXXXXXXXXXXXXVERAII-VNEAKEK--- 69
             +KVL   KLE++ Q ADRS+L F L+                V+R +I   E K+    
Sbjct: 1180 HVKVLDIRKLEILPQEADRSRLHFNLYYLKSVLPKVIVRGISTVQRVVIDAKEVKKNKKD 1239

Query: 68   --------DPGQNKRLKLLVEGTGLLSVIG 3
                    D  + K  KL  EGTGLLSV+G
Sbjct: 1240 LEVTCADGDKREEKEYKLFAEGTGLLSVMG 1269