BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Perilla23_contig00018133
         (692 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AHL27586.1| RNA-dependent RNA polymerase 3 [Salvia miltiorrhiza]   417   e-114
ref|XP_011081567.1| PREDICTED: RNA-dependent RNA polymerase 6 [S...   395   e-107
ref|XP_012857917.1| PREDICTED: RNA-dependent RNA polymerase 6 [E...   387   e-105
gb|ACA13601.1| RNA-dependent RNA polymerase [Nicotiana attenuata]     384   e-104
gb|AAU21242.1| putative RNA-dependent RNA polymerase SDE1 [Nicot...   384   e-104
ref|XP_009758053.1| PREDICTED: RNA-dependent RNA polymerase 6 [N...   382   e-104
ref|XP_006346784.1| PREDICTED: RNA-dependent RNA polymerase 6-li...   381   e-103
ref|XP_010319120.1| PREDICTED: RNA-dependent RNA polymerase 6 is...   380   e-103
ref|NP_001266205.1| RNA-dependent RNA polymerase 6 [Solanum lyco...   380   e-103
gb|ACO72600.1| RNA-dependent RNA polymerase 6 [Nicotiana glutinosa]   380   e-103
emb|CAR47810.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]    379   e-102
gb|ADI52625.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]     379   e-102
ref|XP_007011871.1| RNA-dependent RNA polymerase 6 [Theobroma ca...   378   e-102
ref|XP_010101266.1| RNA-dependent RNA polymerase 6 [Morus notabi...   377   e-102
dbj|BAF96019.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]    377   e-102
ref|XP_009616479.1| PREDICTED: RNA-dependent RNA polymerase 6, p...   376   e-102
gb|KHG28504.1| RNA-dependent RNA polymerase 6 -like protein [Gos...   373   e-101
ref|XP_010254390.1| PREDICTED: RNA-dependent RNA polymerase 6-li...   372   e-100
ref|XP_008219491.1| PREDICTED: RNA-dependent RNA polymerase 6 [P...   372   e-100
ref|XP_002308662.1| SILENCING DEFECTIVE 1 family protein [Populu...   371   e-100

>gb|AHL27586.1| RNA-dependent RNA polymerase 3 [Salvia miltiorrhiza]
          Length = 1195

 Score =  417 bits (1072), Expect = e-114
 Identities = 199/230 (86%), Positives = 214/230 (93%)
 Frame = +1

Query: 1    PSLEDCFVKHGSEFSKTEKNHEVIKGLVVIAKNPCLHPGDVRILEAVDVEGLHHLHDCLV 180
            PSLEDCF  HGSEFS+T+K+ EVIKGLVVIAKNPCLHPGDVRILEAVDV GLHHL+DCLV
Sbjct: 787  PSLEDCFANHGSEFSETKKDLEVIKGLVVIAKNPCLHPGDVRILEAVDVRGLHHLYDCLV 846

Query: 181  FPQRGDRPHPNEASGSDLDGDLYFVTWDENLIPPSKRSWAPMDYEPAEVKQCLHDVTHRD 360
            FPQ+G+RPH NEASGSDLDGDLYFVTWD+ LIPPSKRSW PMDYEP EVK    +VTH D
Sbjct: 847  FPQKGERPHANEASGSDLDGDLYFVTWDDTLIPPSKRSWLPMDYEPGEVKLKPREVTHSD 906

Query: 361  IIDFFTRNIVNESLGTICNAHVVHADLSEYGALDEKCIKLAELAAIAVDFPKTGKIVSMP 540
            II+FFT+N+VNESLGTICNAHVVHADLSEYGALDEKCIKLAELAAIAVDFPKTGKIV+MP
Sbjct: 907  IIEFFTKNMVNESLGTICNAHVVHADLSEYGALDEKCIKLAELAAIAVDFPKTGKIVTMP 966

Query: 541  HDLKPKMYPDFMGKEELQSYKSTKILGKLYRKVRDAYDRDYEESSQLTYP 690
             DLKP+MYPDFMGKEELQSYKSTKILGKLYR+VRDAY+ DYE SSQLTYP
Sbjct: 967  PDLKPQMYPDFMGKEELQSYKSTKILGKLYRRVRDAYNLDYEASSQLTYP 1016


>ref|XP_011081567.1| PREDICTED: RNA-dependent RNA polymerase 6 [Sesamum indicum]
          Length = 1205

 Score =  395 bits (1014), Expect = e-107
 Identities = 185/229 (80%), Positives = 205/229 (89%)
 Frame = +1

Query: 1    PSLEDCFVKHGSEFSKTEKNHEVIKGLVVIAKNPCLHPGDVRILEAVDVEGLHHLHDCLV 180
            PS+EDCFVKHGS+FS+T+K  +V+ GLV IAKNPCLHPGDVRILEAVDV  LHHL+DCLV
Sbjct: 796  PSIEDCFVKHGSQFSETKKKLQVVTGLVAIAKNPCLHPGDVRILEAVDVPELHHLYDCLV 855

Query: 181  FPQRGDRPHPNEASGSDLDGDLYFVTWDENLIPPSKRSWAPMDYEPAEVKQCLHDVTHRD 360
            FPQ+GDRPH NEASGSDLDGDLYFVTWDENLIPPSKRSW PM+Y P EVKQ   +V H D
Sbjct: 856  FPQKGDRPHTNEASGSDLDGDLYFVTWDENLIPPSKRSWTPMEYAPGEVKQLPREVKHSD 915

Query: 361  IIDFFTRNIVNESLGTICNAHVVHADLSEYGALDEKCIKLAELAAIAVDFPKTGKIVSMP 540
            IIDFFT+N+VNESLG ICNAHVVHADLSEYGALDEKCIKLAELAA AVDFPKTGKIV+MP
Sbjct: 916  IIDFFTKNMVNESLGAICNAHVVHADLSEYGALDEKCIKLAELAATAVDFPKTGKIVNMP 975

Query: 541  HDLKPKMYPDFMGKEELQSYKSTKILGKLYRKVRDAYDRDYEESSQLTY 687
             +LKPK YPDFMGKEE QSY S+KILGKLYRK++DAYDRD+E S + T+
Sbjct: 976  AELKPKTYPDFMGKEEFQSYNSSKILGKLYRKIKDAYDRDHEASREHTF 1024


>ref|XP_012857917.1| PREDICTED: RNA-dependent RNA polymerase 6 [Erythranthe guttatus]
            gi|604300451|gb|EYU20269.1| hypothetical protein
            MIMGU_mgv1a000386mg [Erythranthe guttata]
          Length = 1196

 Score =  387 bits (993), Expect = e-105
 Identities = 184/228 (80%), Positives = 205/228 (89%)
 Frame = +1

Query: 1    PSLEDCFVKHGSEFSKTEKNHEVIKGLVVIAKNPCLHPGDVRILEAVDVEGLHHLHDCLV 180
            PSLEDCFVKHGSEFS  +K  EVIKGLV IAKNPCLHPGDVRILEAVD  GLHHL+DCLV
Sbjct: 789  PSLEDCFVKHGSEFSGAKKKLEVIKGLVAIAKNPCLHPGDVRILEAVDCPGLHHLYDCLV 848

Query: 181  FPQRGDRPHPNEASGSDLDGDLYFVTWDENLIPPSKRSWAPMDYEPAEVKQCLHDVTHRD 360
            FPQ+G+RPH NEASGSDLDGDLYFVTWDENL+PPSKRSW PM+Y P EVKQ   +V H D
Sbjct: 849  FPQKGERPHTNEASGSDLDGDLYFVTWDENLMPPSKRSWTPMEYAPGEVKQLPREVKHTD 908

Query: 361  IIDFFTRNIVNESLGTICNAHVVHADLSEYGALDEKCIKLAELAAIAVDFPKTGKIVSMP 540
            II+FFT+N+VNESLG ICNAHVVHAD SEYGALDEKCIKLAELAAIAVDFPKTGKIV+MP
Sbjct: 909  IIEFFTKNMVNESLGAICNAHVVHADSSEYGALDEKCIKLAELAAIAVDFPKTGKIVTMP 968

Query: 541  HDLKPKMYPDFMGKEELQSYKSTKILGKLYRKVRDAYDRDYEESSQLT 684
             +LKPK+YPDFMGK+E Q+YKS+KILGKLYRK++D+ + DYEESS+ T
Sbjct: 969  AELKPKLYPDFMGKDEFQTYKSSKILGKLYRKIKDS-NYDYEESSENT 1015


>gb|ACA13601.1| RNA-dependent RNA polymerase [Nicotiana attenuata]
          Length = 1197

 Score =  384 bits (986), Expect = e-104
 Identities = 181/227 (79%), Positives = 203/227 (89%)
 Frame = +1

Query: 1    PSLEDCFVKHGSEFSKTEKNHEVIKGLVVIAKNPCLHPGDVRILEAVDVEGLHHLHDCLV 180
            PSLE+CF+KHG +FS  +KN +V+KGLVVIAKNPCLHPGDVRILEAVDV GLHHL+DCLV
Sbjct: 788  PSLENCFIKHGPKFSDIKKNLQVVKGLVVIAKNPCLHPGDVRILEAVDVPGLHHLYDCLV 847

Query: 181  FPQRGDRPHPNEASGSDLDGDLYFVTWDENLIPPSKRSWAPMDYEPAEVKQCLHDVTHRD 360
            FPQ+GDRPH NEASGSDLDGDLYFVTWDENLIPPSK+SW PM+YEPAEVKQ    V H D
Sbjct: 848  FPQKGDRPHSNEASGSDLDGDLYFVTWDENLIPPSKKSWIPMNYEPAEVKQMGRQVNHMD 907

Query: 361  IIDFFTRNIVNESLGTICNAHVVHADLSEYGALDEKCIKLAELAAIAVDFPKTGKIVSMP 540
            IIDFF++N+V ESLG ICNAHVVHADLSE+GALDEKC+KLAELAA+AVDFPKTGK+V+MP
Sbjct: 908  IIDFFSKNMVQESLGEICNAHVVHADLSEFGALDEKCLKLAELAALAVDFPKTGKLVTMP 967

Query: 541  HDLKPKMYPDFMGKEELQSYKSTKILGKLYRKVRDAYDRDYEESSQL 681
             DLKPKMYPDFMGKEE QSYKS KILGKLYR+V+D  D + E S+ L
Sbjct: 968  FDLKPKMYPDFMGKEEFQSYKSKKILGKLYRQVKDVCDTEGEVSAGL 1014


>gb|AAU21242.1| putative RNA-dependent RNA polymerase SDE1 [Nicotiana benthamiana]
          Length = 1197

 Score =  384 bits (986), Expect = e-104
 Identities = 181/227 (79%), Positives = 203/227 (89%)
 Frame = +1

Query: 1    PSLEDCFVKHGSEFSKTEKNHEVIKGLVVIAKNPCLHPGDVRILEAVDVEGLHHLHDCLV 180
            PSLE+CF+KHG +FS  +KN +V+KGLVVIAKNPCLHPGDVRILEAVDV GLHHL+DCLV
Sbjct: 788  PSLENCFIKHGPKFSDIKKNLQVVKGLVVIAKNPCLHPGDVRILEAVDVPGLHHLYDCLV 847

Query: 181  FPQRGDRPHPNEASGSDLDGDLYFVTWDENLIPPSKRSWAPMDYEPAEVKQCLHDVTHRD 360
            FPQ+GDRPH NEASGSDLDGDLYFVTWDENLIPPSK+SW PM+YEPAEVKQ    V H D
Sbjct: 848  FPQKGDRPHSNEASGSDLDGDLYFVTWDENLIPPSKKSWIPMNYEPAEVKQLGRQVNHMD 907

Query: 361  IIDFFTRNIVNESLGTICNAHVVHADLSEYGALDEKCIKLAELAAIAVDFPKTGKIVSMP 540
            IIDFF++N+V ESLG ICNAHVVHADLSE+GALDEKC+KLAELAA+AVDFPKTGK+V+MP
Sbjct: 908  IIDFFSKNMVQESLGEICNAHVVHADLSEFGALDEKCLKLAELAALAVDFPKTGKLVTMP 967

Query: 541  HDLKPKMYPDFMGKEELQSYKSTKILGKLYRKVRDAYDRDYEESSQL 681
             DLKPKMYPDFMGKEE QSYKS KILGKLYR+V+D  D + E S+ L
Sbjct: 968  FDLKPKMYPDFMGKEEFQSYKSKKILGKLYRQVKDVCDTEGEVSAGL 1014


>ref|XP_009758053.1| PREDICTED: RNA-dependent RNA polymerase 6 [Nicotiana sylvestris]
          Length = 1197

 Score =  382 bits (982), Expect = e-104
 Identities = 180/227 (79%), Positives = 203/227 (89%)
 Frame = +1

Query: 1    PSLEDCFVKHGSEFSKTEKNHEVIKGLVVIAKNPCLHPGDVRILEAVDVEGLHHLHDCLV 180
            PSLE+CF+KHG +FS  ++N +V+KGLVVIAKNPCLHPGDVRILEAVDV GLHHL+DCLV
Sbjct: 788  PSLENCFIKHGPKFSDIKQNLQVVKGLVVIAKNPCLHPGDVRILEAVDVPGLHHLYDCLV 847

Query: 181  FPQRGDRPHPNEASGSDLDGDLYFVTWDENLIPPSKRSWAPMDYEPAEVKQCLHDVTHRD 360
            FPQ+GDRPH NEASGSDLDGDLYFVTWDENLIPPSK+SW PM+YEPAEVKQ    V H D
Sbjct: 848  FPQKGDRPHSNEASGSDLDGDLYFVTWDENLIPPSKKSWIPMNYEPAEVKQLGRQVNHMD 907

Query: 361  IIDFFTRNIVNESLGTICNAHVVHADLSEYGALDEKCIKLAELAAIAVDFPKTGKIVSMP 540
            IIDFF++N+V ESLG ICNAHVVHADLSE+GALDEKC+KLAELAA+AVDFPKTGK+V+MP
Sbjct: 908  IIDFFSKNMVQESLGEICNAHVVHADLSEFGALDEKCLKLAELAALAVDFPKTGKLVTMP 967

Query: 541  HDLKPKMYPDFMGKEELQSYKSTKILGKLYRKVRDAYDRDYEESSQL 681
             DLKPKMYPDFMGKEE QSYKS KILGKLYR+V+D  D + E S+ L
Sbjct: 968  FDLKPKMYPDFMGKEEFQSYKSKKILGKLYRQVKDVCDTEGEVSAGL 1014


>ref|XP_006346784.1| PREDICTED: RNA-dependent RNA polymerase 6-like isoform X1 [Solanum
            tuberosum] gi|565360032|ref|XP_006346785.1| PREDICTED:
            RNA-dependent RNA polymerase 6-like isoform X2 [Solanum
            tuberosum]
          Length = 1198

 Score =  381 bits (978), Expect = e-103
 Identities = 181/229 (79%), Positives = 201/229 (87%)
 Frame = +1

Query: 1    PSLEDCFVKHGSEFSKTEKNHEVIKGLVVIAKNPCLHPGDVRILEAVDVEGLHHLHDCLV 180
            PSLE CFVKHG +FS+ +KN +VIKGLVVIAKNPCLHPGDVRILEAVDV GLHHL+DCLV
Sbjct: 789  PSLETCFVKHGPKFSEIKKNLQVIKGLVVIAKNPCLHPGDVRILEAVDVPGLHHLYDCLV 848

Query: 181  FPQRGDRPHPNEASGSDLDGDLYFVTWDENLIPPSKRSWAPMDYEPAEVKQCLHDVTHRD 360
            FPQ+GDRPH NEASGSDLDGDLYFVTWDENLIPPSK+SW PMDY PAE KQ    V H D
Sbjct: 849  FPQKGDRPHSNEASGSDLDGDLYFVTWDENLIPPSKKSWMPMDYAPAEAKQLGRQVQHTD 908

Query: 361  IIDFFTRNIVNESLGTICNAHVVHADLSEYGALDEKCIKLAELAAIAVDFPKTGKIVSMP 540
            IIDFF++N+V ESLG ICNAHVVHADLSE+GALDEKC+KLAELAA+AVDFPKTGK+V+MP
Sbjct: 909  IIDFFSKNMVQESLGEICNAHVVHADLSEFGALDEKCLKLAELAALAVDFPKTGKLVTMP 968

Query: 541  HDLKPKMYPDFMGKEELQSYKSTKILGKLYRKVRDAYDRDYEESSQLTY 687
             DLKPKMYPDFMGKE  Q+Y+S KILGKLYR+V D YD +  ESS L +
Sbjct: 969  FDLKPKMYPDFMGKEPFQTYESKKILGKLYRQVIDVYDAEGGESSGLEF 1017


>ref|XP_010319120.1| PREDICTED: RNA-dependent RNA polymerase 6 isoform X1 [Solanum
            lycopersicum] gi|723688503|ref|XP_010319121.1| PREDICTED:
            RNA-dependent RNA polymerase 6 isoform X1 [Solanum
            lycopersicum]
          Length = 1197

 Score =  380 bits (976), Expect = e-103
 Identities = 181/229 (79%), Positives = 199/229 (86%)
 Frame = +1

Query: 1    PSLEDCFVKHGSEFSKTEKNHEVIKGLVVIAKNPCLHPGDVRILEAVDVEGLHHLHDCLV 180
            PSLE CFVKHG EFS+ +KN +V+KGLVVIAKNPCLHPGDVRILEAVDV GLHHL+DCLV
Sbjct: 788  PSLETCFVKHGPEFSEIKKNLQVVKGLVVIAKNPCLHPGDVRILEAVDVPGLHHLYDCLV 847

Query: 181  FPQRGDRPHPNEASGSDLDGDLYFVTWDENLIPPSKRSWAPMDYEPAEVKQCLHDVTHRD 360
            FPQ+GDRPH NEASGSDLDGDLYFVTWDENLIPPSK+SW PM Y PAE KQ    V H D
Sbjct: 848  FPQKGDRPHSNEASGSDLDGDLYFVTWDENLIPPSKKSWMPMAYAPAEAKQLGRQVQHTD 907

Query: 361  IIDFFTRNIVNESLGTICNAHVVHADLSEYGALDEKCIKLAELAAIAVDFPKTGKIVSMP 540
            IIDFF +N+V ESLG ICNAHVVHADLSE+GA+DEKC+KLAELAA+AVDFPKTGK+V+MP
Sbjct: 908  IIDFFLKNMVQESLGEICNAHVVHADLSEFGAMDEKCLKLAELAALAVDFPKTGKLVTMP 967

Query: 541  HDLKPKMYPDFMGKEELQSYKSTKILGKLYRKVRDAYDRDYEESSQLTY 687
             DLKPKMYPDFMGKE  QSY+S KILGKLYR+V D YD +  ESS L Y
Sbjct: 968  FDLKPKMYPDFMGKEPFQSYESKKILGKLYRQVIDVYDAEGGESSGLEY 1016


>ref|NP_001266205.1| RNA-dependent RNA polymerase 6 [Solanum lycopersicum]
            gi|397529811|gb|AFO53516.1| RNA-dependent RNA polymerase
            6 [Solanum lycopersicum]
          Length = 1197

 Score =  380 bits (976), Expect = e-103
 Identities = 181/229 (79%), Positives = 199/229 (86%)
 Frame = +1

Query: 1    PSLEDCFVKHGSEFSKTEKNHEVIKGLVVIAKNPCLHPGDVRILEAVDVEGLHHLHDCLV 180
            PSLE CFVKHG EFS+ +KN +V+KGLVVIAKNPCLHPGDVRILEAVDV GLHHL+DCLV
Sbjct: 788  PSLETCFVKHGPEFSEIKKNLQVVKGLVVIAKNPCLHPGDVRILEAVDVPGLHHLYDCLV 847

Query: 181  FPQRGDRPHPNEASGSDLDGDLYFVTWDENLIPPSKRSWAPMDYEPAEVKQCLHDVTHRD 360
            FPQ+GDRPH NEASGSDLDGDLYFVTWDENLIPPSK+SW PM Y PAE KQ    V H D
Sbjct: 848  FPQKGDRPHSNEASGSDLDGDLYFVTWDENLIPPSKKSWMPMAYAPAEAKQLGRQVQHTD 907

Query: 361  IIDFFTRNIVNESLGTICNAHVVHADLSEYGALDEKCIKLAELAAIAVDFPKTGKIVSMP 540
            IIDFF +N+V ESLG ICNAHVVHADLSE+GA+DEKC+KLAELAA+AVDFPKTGK+V+MP
Sbjct: 908  IIDFFLKNMVQESLGEICNAHVVHADLSEFGAMDEKCLKLAELAALAVDFPKTGKLVTMP 967

Query: 541  HDLKPKMYPDFMGKEELQSYKSTKILGKLYRKVRDAYDRDYEESSQLTY 687
             DLKPKMYPDFMGKE  QSY+S KILGKLYR+V D YD +  ESS L Y
Sbjct: 968  FDLKPKMYPDFMGKEPFQSYESKKILGKLYRQVIDVYDAEGGESSGLEY 1016


>gb|ACO72600.1| RNA-dependent RNA polymerase 6 [Nicotiana glutinosa]
          Length = 1197

 Score =  380 bits (975), Expect = e-103
 Identities = 180/227 (79%), Positives = 202/227 (88%)
 Frame = +1

Query: 1    PSLEDCFVKHGSEFSKTEKNHEVIKGLVVIAKNPCLHPGDVRILEAVDVEGLHHLHDCLV 180
            PSLE+CFVKHGS+FS  +KN +V+KGLVVIAKNPCLHPGDVRILEAVDV  L HL+DCLV
Sbjct: 788  PSLENCFVKHGSKFSDIKKNLQVVKGLVVIAKNPCLHPGDVRILEAVDVPSLSHLYDCLV 847

Query: 181  FPQRGDRPHPNEASGSDLDGDLYFVTWDENLIPPSKRSWAPMDYEPAEVKQCLHDVTHRD 360
            FPQ+GDRPH NEASGSDLDGDLYFVTWDEN+IPPSK+SW PM+YEPAEVKQ    V H D
Sbjct: 848  FPQKGDRPHSNEASGSDLDGDLYFVTWDENIIPPSKKSWIPMNYEPAEVKQLGRQVNHMD 907

Query: 361  IIDFFTRNIVNESLGTICNAHVVHADLSEYGALDEKCIKLAELAAIAVDFPKTGKIVSMP 540
            IIDFF++N+V ESLG ICNAHVVHADLSE+GALDEKC+KLAELAA+AVDFPKTGK+V+MP
Sbjct: 908  IIDFFSKNMVQESLGEICNAHVVHADLSEFGALDEKCLKLAELAALAVDFPKTGKLVTMP 967

Query: 541  HDLKPKMYPDFMGKEELQSYKSTKILGKLYRKVRDAYDRDYEESSQL 681
             DLKPKMYPDFMGKEE QSYKS KILGKLYR+V+D  D + E S+ L
Sbjct: 968  FDLKPKMYPDFMGKEEFQSYKSKKILGKLYRQVKDVCDAEGEVSAGL 1014


>emb|CAR47810.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]
          Length = 1197

 Score =  379 bits (972), Expect = e-102
 Identities = 180/227 (79%), Positives = 201/227 (88%)
 Frame = +1

Query: 1    PSLEDCFVKHGSEFSKTEKNHEVIKGLVVIAKNPCLHPGDVRILEAVDVEGLHHLHDCLV 180
            PSLE+CFVKHG +FS  +KN +V+KGLVVIAKNPCLHPGDVRILEAVDV  L HL+DCLV
Sbjct: 788  PSLENCFVKHGPKFSDIKKNLQVVKGLVVIAKNPCLHPGDVRILEAVDVPSLSHLYDCLV 847

Query: 181  FPQRGDRPHPNEASGSDLDGDLYFVTWDENLIPPSKRSWAPMDYEPAEVKQCLHDVTHRD 360
            FPQ+GDRPH NEASGSDLDGDLYFVTWDENLIPPSK+SW PM+YEPAEVKQ    V H D
Sbjct: 848  FPQKGDRPHSNEASGSDLDGDLYFVTWDENLIPPSKKSWIPMNYEPAEVKQLGRQVNHMD 907

Query: 361  IIDFFTRNIVNESLGTICNAHVVHADLSEYGALDEKCIKLAELAAIAVDFPKTGKIVSMP 540
            IIDFF++N+V ESLG ICNAHVVHADLSE+GALDEKC+KLAELAA+AVDFPKTGK+V+MP
Sbjct: 908  IIDFFSKNMVQESLGEICNAHVVHADLSEFGALDEKCLKLAELAALAVDFPKTGKLVTMP 967

Query: 541  HDLKPKMYPDFMGKEELQSYKSTKILGKLYRKVRDAYDRDYEESSQL 681
             DLKPKMYPDFMGKEE QSYKS KILGKLYR+V+D  D + E S+ L
Sbjct: 968  FDLKPKMYPDFMGKEEFQSYKSKKILGKLYRQVKDVCDAEGEVSAGL 1014


>gb|ADI52625.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]
          Length = 1197

 Score =  379 bits (972), Expect = e-102
 Identities = 180/227 (79%), Positives = 201/227 (88%)
 Frame = +1

Query: 1    PSLEDCFVKHGSEFSKTEKNHEVIKGLVVIAKNPCLHPGDVRILEAVDVEGLHHLHDCLV 180
            PSLE+CFVKHG +FS  +KN +V+KGLVVIAKNPCLHPGDVRILEAVDV  L HL+DCLV
Sbjct: 788  PSLENCFVKHGPKFSDIKKNLQVVKGLVVIAKNPCLHPGDVRILEAVDVPSLSHLYDCLV 847

Query: 181  FPQRGDRPHPNEASGSDLDGDLYFVTWDENLIPPSKRSWAPMDYEPAEVKQCLHDVTHRD 360
            FPQ+GDRPH NEASGSDLDGDLYFVTWDENLIPPSK+SW PM+YEPAEVKQ    V H D
Sbjct: 848  FPQKGDRPHSNEASGSDLDGDLYFVTWDENLIPPSKKSWIPMNYEPAEVKQLGRQVNHMD 907

Query: 361  IIDFFTRNIVNESLGTICNAHVVHADLSEYGALDEKCIKLAELAAIAVDFPKTGKIVSMP 540
            IIDFF++N+V ESLG ICNAHVVHADLSE+GALDEKC+KLAELAA+AVDFPKTGK+V+MP
Sbjct: 908  IIDFFSKNMVQESLGEICNAHVVHADLSEFGALDEKCLKLAELAALAVDFPKTGKLVTMP 967

Query: 541  HDLKPKMYPDFMGKEELQSYKSTKILGKLYRKVRDAYDRDYEESSQL 681
             DLKPKMYPDFMGKEE QSYKS KILGKLYR+V+D  D + E S+ L
Sbjct: 968  FDLKPKMYPDFMGKEEFQSYKSKKILGKLYRQVKDVCDAEGEVSAGL 1014


>ref|XP_007011871.1| RNA-dependent RNA polymerase 6 [Theobroma cacao]
            gi|508782234|gb|EOY29490.1| RNA-dependent RNA polymerase
            6 [Theobroma cacao]
          Length = 1197

 Score =  378 bits (970), Expect = e-102
 Identities = 173/227 (76%), Positives = 200/227 (88%)
 Frame = +1

Query: 1    PSLEDCFVKHGSEFSKTEKNHEVIKGLVVIAKNPCLHPGDVRILEAVDVEGLHHLHDCLV 180
            PS+E+CF+KHGS F++T+KN EVI+GLVVIAKNPCLHPGD+RILEAVD  GLHHL+DCLV
Sbjct: 788  PSVENCFLKHGSRFAETKKNFEVIQGLVVIAKNPCLHPGDIRILEAVDAPGLHHLYDCLV 847

Query: 181  FPQRGDRPHPNEASGSDLDGDLYFVTWDENLIPPSKRSWAPMDYEPAEVKQCLHDVTHRD 360
            FPQ+G+RPH NEASGSDLDGDLYFVTW++ LIPP K+SW PM Y+P E K+   +V H+D
Sbjct: 848  FPQKGERPHTNEASGSDLDGDLYFVTWEDLLIPPGKKSWPPMQYDPGETKEIQREVNHKD 907

Query: 361  IIDFFTRNIVNESLGTICNAHVVHADLSEYGALDEKCIKLAELAAIAVDFPKTGKIVSMP 540
            IIDFF +N+VNE LGTICNAHVVHADLSEYGALDEKCI LAELAA AVDFPKTGKIVSMP
Sbjct: 908  IIDFFAKNMVNEHLGTICNAHVVHADLSEYGALDEKCIHLAELAATAVDFPKTGKIVSMP 967

Query: 541  HDLKPKMYPDFMGKEELQSYKSTKILGKLYRKVRDAYDRDYEESSQL 681
             +LKPK+YPDFMGKEE QSYKS KILG+LYR ++D YD D  ESS++
Sbjct: 968  ANLKPKLYPDFMGKEEYQSYKSRKILGRLYRHIKDVYDEDLSESSEI 1014


>ref|XP_010101266.1| RNA-dependent RNA polymerase 6 [Morus notabilis]
            gi|587899821|gb|EXB88201.1| RNA-dependent RNA polymerase
            6 [Morus notabilis]
          Length = 1194

 Score =  377 bits (969), Expect = e-102
 Identities = 177/227 (77%), Positives = 200/227 (88%)
 Frame = +1

Query: 1    PSLEDCFVKHGSEFSKTEKNHEVIKGLVVIAKNPCLHPGDVRILEAVDVEGLHHLHDCLV 180
            PSLE+CF KHGS FS+T+ N EVIKG VVIAKNPCLHPGD+RILEAVDV GLHHL+DCLV
Sbjct: 784  PSLENCFSKHGSRFSETKNNLEVIKGFVVIAKNPCLHPGDIRILEAVDVPGLHHLYDCLV 843

Query: 181  FPQRGDRPHPNEASGSDLDGDLYFVTWDENLIPPSKRSWAPMDYEPAEVKQCLHDVTHRD 360
            FPQ+GDRPH NEASGSDLDGDLYFVTWDENLIPPSK+SW PM Y+PA+ +    DVT +D
Sbjct: 844  FPQKGDRPHANEASGSDLDGDLYFVTWDENLIPPSKKSWNPMQYDPAKPRTLPRDVTQKD 903

Query: 361  IIDFFTRNIVNESLGTICNAHVVHADLSEYGALDEKCIKLAELAAIAVDFPKTGKIVSMP 540
            IIDFF+RN+VNESLG ICNAHVVHADLS+YGALDEKC+ LAELAAIAVDFPKTG IV+MP
Sbjct: 904  IIDFFSRNMVNESLGAICNAHVVHADLSDYGALDEKCLSLAELAAIAVDFPKTGIIVTMP 963

Query: 541  HDLKPKMYPDFMGKEELQSYKSTKILGKLYRKVRDAYDRDYEESSQL 681
              LKPK+YPDFMGKEE QSYKSTKI+G+LYR+++D Y  D   SS+L
Sbjct: 964  AHLKPKIYPDFMGKEEYQSYKSTKIMGRLYRQIKDEYSDDVSPSSEL 1010


>dbj|BAF96019.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]
          Length = 1197

 Score =  377 bits (968), Expect = e-102
 Identities = 179/227 (78%), Positives = 201/227 (88%)
 Frame = +1

Query: 1    PSLEDCFVKHGSEFSKTEKNHEVIKGLVVIAKNPCLHPGDVRILEAVDVEGLHHLHDCLV 180
            PSLE+CFVKHG +FS  ++N +V+KGLVVIAKNPCLHPGDVRILEAVDV  L HL+DCLV
Sbjct: 788  PSLENCFVKHGPKFSDIKQNLQVVKGLVVIAKNPCLHPGDVRILEAVDVPSLSHLYDCLV 847

Query: 181  FPQRGDRPHPNEASGSDLDGDLYFVTWDENLIPPSKRSWAPMDYEPAEVKQCLHDVTHRD 360
            FPQ+GDRPH NEASGSDLDGDLYFVTWDENLIPPSK+SW PM+YEPAEVKQ    V H D
Sbjct: 848  FPQKGDRPHSNEASGSDLDGDLYFVTWDENLIPPSKKSWIPMNYEPAEVKQLGRQVNHMD 907

Query: 361  IIDFFTRNIVNESLGTICNAHVVHADLSEYGALDEKCIKLAELAAIAVDFPKTGKIVSMP 540
            IIDFF++N+V ESLG ICNAHVVHADLSE+GALDEKC+KLAELAA+AVDFPKTGK+V+MP
Sbjct: 908  IIDFFSKNMVQESLGEICNAHVVHADLSEFGALDEKCLKLAELAALAVDFPKTGKLVTMP 967

Query: 541  HDLKPKMYPDFMGKEELQSYKSTKILGKLYRKVRDAYDRDYEESSQL 681
             DLKPKMYPDFMGKEE QSYKS KILGKLYR+V+D  D + E S+ L
Sbjct: 968  FDLKPKMYPDFMGKEEFQSYKSKKILGKLYRQVKDVCDAEGEVSAGL 1014


>ref|XP_009616479.1| PREDICTED: RNA-dependent RNA polymerase 6, partial [Nicotiana
            tomentosiformis]
          Length = 956

 Score =  376 bits (965), Expect = e-102
 Identities = 179/227 (78%), Positives = 200/227 (88%)
 Frame = +1

Query: 1    PSLEDCFVKHGSEFSKTEKNHEVIKGLVVIAKNPCLHPGDVRILEAVDVEGLHHLHDCLV 180
            PSLE+CFVKHG +FS  +KN +V+KGLVVIAKNPCLHPGDVRILEAVDV  L HL+DCLV
Sbjct: 547  PSLENCFVKHGPKFSDIKKNLQVVKGLVVIAKNPCLHPGDVRILEAVDVPSLSHLYDCLV 606

Query: 181  FPQRGDRPHPNEASGSDLDGDLYFVTWDENLIPPSKRSWAPMDYEPAEVKQCLHDVTHRD 360
            FPQ+GDRPH NEASGSDLDGDLYFVTWDENLIPPSK+SW PM+YEPAEVKQ    V H D
Sbjct: 607  FPQKGDRPHSNEASGSDLDGDLYFVTWDENLIPPSKKSWIPMNYEPAEVKQLGRQVNHMD 666

Query: 361  IIDFFTRNIVNESLGTICNAHVVHADLSEYGALDEKCIKLAELAAIAVDFPKTGKIVSMP 540
            IIDFF++N+V ESLG ICNAHVVHADLS +GALDEKC+KLAELAA+AVDFPKTGK+V+MP
Sbjct: 667  IIDFFSKNMVQESLGEICNAHVVHADLSGFGALDEKCLKLAELAALAVDFPKTGKLVTMP 726

Query: 541  HDLKPKMYPDFMGKEELQSYKSTKILGKLYRKVRDAYDRDYEESSQL 681
             DLKPKMYPDFMGKEE QSYKS KILGKLYR+V+D  D + E S+ L
Sbjct: 727  FDLKPKMYPDFMGKEEFQSYKSKKILGKLYRQVKDVCDAEGEVSAGL 773


>gb|KHG28504.1| RNA-dependent RNA polymerase 6 -like protein [Gossypium arboreum]
          Length = 1214

 Score =  373 bits (957), Expect = e-101
 Identities = 173/229 (75%), Positives = 203/229 (88%)
 Frame = +1

Query: 1    PSLEDCFVKHGSEFSKTEKNHEVIKGLVVIAKNPCLHPGDVRILEAVDVEGLHHLHDCLV 180
            PSL++CF+KHGS F++T+KN EVIKGLVVIAKNPCLHPGD+RILEAVD  GLHHL+DCLV
Sbjct: 790  PSLQNCFLKHGSRFAETKKNFEVIKGLVVIAKNPCLHPGDIRILEAVDAPGLHHLYDCLV 849

Query: 181  FPQRGDRPHPNEASGSDLDGDLYFVTWDENLIPPSKRSWAPMDYEPAEVKQCLHDVTHRD 360
            FPQ+G+RPH NEASGSDLDGDLYFVTW+E LIPPSK+S  PM Y+P E ++    VTH+D
Sbjct: 850  FPQKGERPHTNEASGSDLDGDLYFVTWEEALIPPSKKSSQPMQYDPDEPRELNRPVTHKD 909

Query: 361  IIDFFTRNIVNESLGTICNAHVVHADLSEYGALDEKCIKLAELAAIAVDFPKTGKIVSMP 540
            II+FF++N+VNE LG+ICNAHVVH+DLSE+GA DEKCI LAELAAIAVDFPKTGKIVSMP
Sbjct: 910  IIEFFSKNMVNEHLGSICNAHVVHSDLSEHGASDEKCIHLAELAAIAVDFPKTGKIVSMP 969

Query: 541  HDLKPKMYPDFMGKEELQSYKSTKILGKLYRKVRDAYDRDYEESSQLTY 687
              LKPK+YPDFMGKEE QSYKS KILG+LYR ++DAYD+D  ESS+L +
Sbjct: 970  AQLKPKLYPDFMGKEEFQSYKSNKILGRLYRYIKDAYDKDVSESSELNF 1018


>ref|XP_010254390.1| PREDICTED: RNA-dependent RNA polymerase 6-like [Nelumbo nucifera]
            gi|719995135|ref|XP_010254391.1| PREDICTED: RNA-dependent
            RNA polymerase 6-like [Nelumbo nucifera]
            gi|719995138|ref|XP_010254392.1| PREDICTED: RNA-dependent
            RNA polymerase 6-like [Nelumbo nucifera]
            gi|719995142|ref|XP_010254393.1| PREDICTED: RNA-dependent
            RNA polymerase 6-like [Nelumbo nucifera]
          Length = 1193

 Score =  372 bits (955), Expect = e-100
 Identities = 173/224 (77%), Positives = 196/224 (87%)
 Frame = +1

Query: 1    PSLEDCFVKHGSEFSKTEKNHEVIKGLVVIAKNPCLHPGDVRILEAVDVEGLHHLHDCLV 180
            PSLE+CF KHGS FS+ +KN +V+KG+V IAKNPCLHPGD+RILEA+DV  LHHL DCLV
Sbjct: 786  PSLENCFSKHGSRFSEVKKNTQVVKGIVAIAKNPCLHPGDIRILEAIDVPSLHHLIDCLV 845

Query: 181  FPQRGDRPHPNEASGSDLDGDLYFVTWDENLIPPSKRSWAPMDYEPAEVKQCLHDVTHRD 360
            FPQ+GDRPH NEASGSDLDGDLYFVTWDE+LIPPSK+S  PMDY PAEVK+   DV HRD
Sbjct: 846  FPQKGDRPHTNEASGSDLDGDLYFVTWDEHLIPPSKQSLVPMDYSPAEVKKLPRDVNHRD 905

Query: 361  IIDFFTRNIVNESLGTICNAHVVHADLSEYGALDEKCIKLAELAAIAVDFPKTGKIVSMP 540
            +IDFF +++VNE LG ICNAHVVHADLSEYGALDEKCI+LAELAA AVDFPKTGK+V++P
Sbjct: 906  LIDFFMKSMVNEKLGVICNAHVVHADLSEYGALDEKCIQLAELAATAVDFPKTGKVVTVP 965

Query: 541  HDLKPKMYPDFMGKEELQSYKSTKILGKLYRKVRDAYDRDYEES 672
             +LKPK YPDFMGKEE QSYKS KILGKLYRK++D  D D EES
Sbjct: 966  QELKPKRYPDFMGKEEFQSYKSNKILGKLYRKIKDFSDEDVEES 1009


>ref|XP_008219491.1| PREDICTED: RNA-dependent RNA polymerase 6 [Prunus mume]
          Length = 1196

 Score =  372 bits (955), Expect = e-100
 Identities = 172/229 (75%), Positives = 199/229 (86%)
 Frame = +1

Query: 1    PSLEDCFVKHGSEFSKTEKNHEVIKGLVVIAKNPCLHPGDVRILEAVDVEGLHHLHDCLV 180
            PSLE CF KHGS F++ E+N +VIKG VVIAKNPCLHPGD+RILEAVD  GLHHL+DCLV
Sbjct: 786  PSLESCFAKHGSSFAQIERNLQVIKGYVVIAKNPCLHPGDIRILEAVDAPGLHHLYDCLV 845

Query: 181  FPQRGDRPHPNEASGSDLDGDLYFVTWDENLIPPSKRSWAPMDYEPAEVKQCLHDVTHRD 360
            FPQ+GDRPH +EASGSDLDGDLYFVTWDENLIPPSK+SW PM Y+PAE K+    VT +D
Sbjct: 846  FPQKGDRPHTDEASGSDLDGDLYFVTWDENLIPPSKKSWMPMQYDPAEAKRQGRPVTQQD 905

Query: 361  IIDFFTRNIVNESLGTICNAHVVHADLSEYGALDEKCIKLAELAAIAVDFPKTGKIVSMP 540
            IIDFF +N+ NE+LG ICNAHVVHAD S+YGALDE C+KLAELAA+AVDFPKTGKIV++P
Sbjct: 906  IIDFFVKNMTNENLGPICNAHVVHADRSDYGALDENCLKLAELAALAVDFPKTGKIVTLP 965

Query: 541  HDLKPKMYPDFMGKEELQSYKSTKILGKLYRKVRDAYDRDYEESSQLTY 687
              LKP++YPDF+GKE+ QSYKSTKILG+LYRKVRDAYD D   +S+L Y
Sbjct: 966  QHLKPRLYPDFLGKEDNQSYKSTKILGRLYRKVRDAYDEDAATTSELHY 1014


>ref|XP_002308662.1| SILENCING DEFECTIVE 1 family protein [Populus trichocarpa]
            gi|222854638|gb|EEE92185.1| SILENCING DEFECTIVE 1 family
            protein [Populus trichocarpa]
          Length = 1198

 Score =  371 bits (952), Expect = e-100
 Identities = 174/228 (76%), Positives = 199/228 (87%), Gaps = 1/228 (0%)
 Frame = +1

Query: 7    LEDCFVKHGSEFSKTEKNHEVIKGLVVIAKNPCLHPGDVRILEAVDVEGLHHLHDCLVFP 186
            LE+CFVKHGS+FS+T+KN +V+KG VVIAKNPCLHPGD+RILEAVD  GLHHL+DCLVFP
Sbjct: 790  LENCFVKHGSKFSETKKNLQVVKGTVVIAKNPCLHPGDIRILEAVDAPGLHHLYDCLVFP 849

Query: 187  QRGDRPHPNEASGSDLDGDLYFVTWDENLIPPSKRSWAPMDYEPAEVKQCLHDVTHRDII 366
            Q+G+RPH NEASGSDLDGDLYFVTWDENLIPPSKRSW PM Y+ AE KQ    V H+DI+
Sbjct: 850  QKGERPHANEASGSDLDGDLYFVTWDENLIPPSKRSWIPMQYDAAEAKQLTRPVNHQDIV 909

Query: 367  DFFTRNIVNESLGTICNAHVVHADLSEYGALDEKCIKLAELAAIAVDFPKTGKIVSMPHD 546
            +FF +N+ NE+LG ICNAHVV ADLSEYGALDEKC+ LAELAA AVDFPKTGKIVSMP D
Sbjct: 910  EFFAKNMANENLGAICNAHVVRADLSEYGALDEKCLTLAELAATAVDFPKTGKIVSMPSD 969

Query: 547  LKPKMYPDFMGKEELQSYKSTKILGKLYRKVRDAY-DRDYEESSQLTY 687
            LKPK+YPDFMGKEE QSYKS KILG+LYR+++DAY D D   SS+L +
Sbjct: 970  LKPKIYPDFMGKEEHQSYKSKKILGRLYRQIKDAYDDDDVAASSELNF 1017