BLASTX nr result

ID: Perilla23_contig00016729 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Perilla23_contig00016729
         (583 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011075556.1| PREDICTED: ERAD-associated E3 ubiquitin-prot...   100   5e-19
ref|XP_011075555.1| PREDICTED: ERAD-associated E3 ubiquitin-prot...   100   5e-19
ref|XP_011070965.1| PREDICTED: ERAD-associated E3 ubiquitin-prot...    96   2e-17

>ref|XP_011075556.1| PREDICTED: ERAD-associated E3 ubiquitin-protein ligase HRD1B-like
           isoform X2 [Sesamum indicum]
          Length = 531

 Score =  100 bits (249), Expect = 5e-19
 Identities = 64/124 (51%), Positives = 73/124 (58%), Gaps = 15/124 (12%)
 Frame = -1

Query: 583 IYEKSFVYPSPNALMWSAGYALPPQTFRHPV---MAKDGGEGAASGLSEQ--FANKTL-- 425
           +YEKSFVYPSPNALMWS GY   P+TF HP    MA  GG GAASGLS+Q  FAN T   
Sbjct: 390 LYEKSFVYPSPNALMWSPGYNSLPKTFGHPASTSMANTGG-GAASGLSQQYEFANVTFAQ 448

Query: 424 --------DQFPNFNTNFGAGSALESQLDLQRKLIEHXXXXXXXXXXXLRTSNGEKTKDV 269
                    QFP  N  F   SA +SQL LQ KLI++           L+T NGEKT D+
Sbjct: 449 LPQCAPLPSQFPCLNGQFDPESASDSQLGLQTKLIKNQIEFLQNQYQLLQTQNGEKTMDL 508

Query: 268 GTFD 257
           G+ D
Sbjct: 509 GSSD 512


>ref|XP_011075555.1| PREDICTED: ERAD-associated E3 ubiquitin-protein ligase HRD1B-like
           isoform X1 [Sesamum indicum]
          Length = 539

 Score =  100 bits (249), Expect = 5e-19
 Identities = 64/124 (51%), Positives = 73/124 (58%), Gaps = 15/124 (12%)
 Frame = -1

Query: 583 IYEKSFVYPSPNALMWSAGYALPPQTFRHPV---MAKDGGEGAASGLSEQ--FANKTL-- 425
           +YEKSFVYPSPNALMWS GY   P+TF HP    MA  GG GAASGLS+Q  FAN T   
Sbjct: 398 LYEKSFVYPSPNALMWSPGYNSLPKTFGHPASTSMANTGG-GAASGLSQQYEFANVTFAQ 456

Query: 424 --------DQFPNFNTNFGAGSALESQLDLQRKLIEHXXXXXXXXXXXLRTSNGEKTKDV 269
                    QFP  N  F   SA +SQL LQ KLI++           L+T NGEKT D+
Sbjct: 457 LPQCAPLPSQFPCLNGQFDPESASDSQLGLQTKLIKNQIEFLQNQYQLLQTQNGEKTMDL 516

Query: 268 GTFD 257
           G+ D
Sbjct: 517 GSSD 520


>ref|XP_011070965.1| PREDICTED: ERAD-associated E3 ubiquitin-protein ligase HRD1B-like
           [Sesamum indicum]
          Length = 537

 Score = 95.5 bits (236), Expect = 2e-17
 Identities = 61/124 (49%), Positives = 71/124 (57%), Gaps = 15/124 (12%)
 Frame = -1

Query: 583 IYEKSFVYPSPNALMWSAGYALPPQTFRH---PVMAKDGGEGAASGLSE--QFANKTLDQ 419
           IYEKSFVYPSPN L WS GY L PQTF H    V+A DG +GA SGLS+  Q AN    Q
Sbjct: 390 IYEKSFVYPSPNTLSWSPGYTLLPQTFGHCGNNVVASDGEDGAVSGLSQEHQLANMVFPQ 449

Query: 418 FP----------NFNTNFGAGSALESQLDLQRKLIEHXXXXXXXXXXXLRTSNGEKTKDV 269
            P           FN +F +G+A  S+ DLQ KLIEH           L+TS+  K KD+
Sbjct: 450 LPQGSFVPPQFQGFNGHFASGNA--SEHDLQVKLIEHQIEFLQRQLELLQTSSSGKGKDL 507

Query: 268 GTFD 257
           GT D
Sbjct: 508 GTSD 511


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