BLASTX nr result

ID: Perilla23_contig00015647 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Perilla23_contig00015647
         (1070 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011080825.1| PREDICTED: transcription initiation factor I...   473   e-130
ref|XP_012836118.1| PREDICTED: transcription initiation factor I...   459   e-126
emb|CDP09102.1| unnamed protein product [Coffea canephora]            437   e-120
ref|XP_006350788.1| PREDICTED: transcription initiation factor I...   414   e-113
ref|XP_004241212.1| PREDICTED: transcription initiation factor I...   413   e-112
ref|XP_009787287.1| PREDICTED: transcription initiation factor I...   407   e-110
ref|XP_009622244.1| PREDICTED: transcription initiation factor I...   406   e-110
ref|XP_012066966.1| PREDICTED: transcription initiation factor I...   377   e-102
ref|XP_002520518.1| protein with unknown function [Ricinus commu...   366   2e-98
gb|KDO66627.1| hypothetical protein CISIN_1g015442mg [Citrus sin...   350   1e-93
gb|KDO66626.1| hypothetical protein CISIN_1g015442mg [Citrus sin...   350   1e-93
ref|XP_006424899.1| hypothetical protein CICLE_v10028561mg [Citr...   348   6e-93
ref|XP_010685693.1| PREDICTED: transcription initiation factor I...   345   5e-92
gb|KDO66628.1| hypothetical protein CISIN_1g015442mg [Citrus sin...   343   1e-91
ref|XP_011032247.1| PREDICTED: transcription initiation factor I...   343   2e-91
ref|XP_002282322.1| PREDICTED: transcription initiation factor I...   342   4e-91
ref|XP_006369542.1| hypothetical protein POPTR_0001s25120g [Popu...   340   2e-90
ref|XP_007016334.1| Transcription initiation factor IIA subunit ...   339   3e-90
ref|XP_012475136.1| PREDICTED: transcription initiation factor I...   338   6e-90
ref|XP_009375942.1| PREDICTED: transcription initiation factor I...   337   1e-89

>ref|XP_011080825.1| PREDICTED: transcription initiation factor IIA large subunit-like
            [Sesamum indicum]
          Length = 410

 Score =  473 bits (1217), Expect = e-130
 Identities = 249/364 (68%), Positives = 268/364 (73%), Gaps = 8/364 (2%)
 Frame = -1

Query: 1070 WELKMMQAGAILGPIDRSAKQKA-AGGPVTPNPVHDLNVXXXXXXXXXXXT-ADXXXXXX 897
            WELKMMQAGAILGPIDRSA QK+ AGGP+TPNPVHDLNV             AD      
Sbjct: 43   WELKMMQAGAILGPIDRSATQKSGAGGPITPNPVHDLNVPYEGTEEYYEPPTADLLVPPT 102

Query: 896  XXXXXXXXXXPGMAQTPLPGTAQTPLPGTAQTPLPGNDSSSFYNIPTGGTPITPNEYSSN 717
                      PG AQTPLPG AQTPLPGTA TPLPG+DSSS YNIPTGGTPITPNEY+S 
Sbjct: 103  PLQTPMQTPLPGTAQTPLPGMAQTPLPGTAPTPLPGSDSSSLYNIPTGGTPITPNEYTST 162

Query: 716  IENGGEGLIKAGTGRPSQYMQPPSSWMNQRPPLDVNVAYVEGREEGDKGAPNNPSTQDFF 537
             ENG    +KAG GRPS YMQPPS+W+NQRPPLDVNVAYVEGREE ++GAP+ P+TQDFF
Sbjct: 163  NENGVPE-VKAGPGRPSPYMQPPSAWINQRPPLDVNVAYVEGREESERGAPHQPTTQDFF 221

Query: 536  TMSSGKRKREDIPPQYRPGGYIPQQDGAGDVLSDVS------KVGLGSISRMPVQERSSS 375
             +SSGKRKR+D+PPQYR GGYIPQQDGAGD +SD        KV  G   +M  Q  + S
Sbjct: 222  -ISSGKRKRDDLPPQYRAGGYIPQQDGAGDNISDEDNRSQNLKVVQGGNQQMFFQVGTMS 280

Query: 374  GRIPQLDGPMPDPYDDELSTPNIYNYQGVTNEDYNIVNTPMPNEMQAATPAXXXXXXXXX 195
             RIPQLDGP+PDPYDD LSTPNIYNYQGV NEDYNIVNTPMPNEM AATPA         
Sbjct: 281  SRIPQLDGPIPDPYDDVLSTPNIYNYQGVVNEDYNIVNTPMPNEMHAATPAPVQNDTGDD 340

Query: 194  XXXXXXXXXXXXXXXXXDQGEDLNTTHLVLAQFDKVTRTKSRWKCTLKDGIMHVNNKDIL 15
                             DQGEDLNTTHLVLAQFDKVTRTKSRWKCTLKDGIMH+NNKDIL
Sbjct: 341  DDDEPLNEDDDDDLDDVDQGEDLNTTHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDIL 400

Query: 14   FNKA 3
            FNKA
Sbjct: 401  FNKA 404


>ref|XP_012836118.1| PREDICTED: transcription initiation factor IIA large subunit
            [Erythranthe guttatus] gi|604347799|gb|EYU45954.1|
            hypothetical protein MIMGU_mgv1a007767mg [Erythranthe
            guttata]
          Length = 396

 Score =  459 bits (1182), Expect = e-126
 Identities = 241/357 (67%), Positives = 259/357 (72%), Gaps = 1/357 (0%)
 Frame = -1

Query: 1070 WELKMMQAGAILGPIDRSAKQKAAGGPVTPNPVHDLNVXXXXXXXXXXXTADXXXXXXXX 891
            WELKMM+AGAILGPIDRSA QK AGGP+TPNPVHDLNV           TAD        
Sbjct: 43   WELKMMEAGAILGPIDRSASQKGAGGPITPNPVHDLNVPYEGTEEYETPTADLLFPPTPL 102

Query: 890  XXXXXXXXPGMAQTPLPGTAQTPLPGTAQTPLPGNDSSSFYNIPTGGTPITPNEYSSNIE 711
                     G AQTPLPG AQTPLPGTAQTPL G+DS S YNIPTGGTPITPNEY S  +
Sbjct: 103  QTPLP----GTAQTPLPGMAQTPLPGTAQTPLTGSDSGSLYNIPTGGTPITPNEYVSPND 158

Query: 710  NGGEGLIKAGTGRPSQYMQPPSSWMNQRPPLDVNVAYVEGREEGDKGAPNNPSTQDFFTM 531
            N G   +KAG GRPS YMQPPS W NQRPPLDVNVAYVEGREE ++G P+  +TQDFF +
Sbjct: 159  NVGVSEVKAGPGRPSPYMQPPSPWQNQRPPLDVNVAYVEGREESERGGPHQQTTQDFF-V 217

Query: 530  SSGKRKREDIPPQYRPGGYIPQQDGAGDVLSDVSKVGLGSISRMPVQERSSSGRIPQLDG 351
            +SGKRKR++ PPQY+ GGYIPQQDGAGD LSD  KV L  I     Q  +SS RIPQ DG
Sbjct: 218  ASGKRKRDNFPPQYQAGGYIPQQDGAGDNLSDEMKVVLDVIG----QGGTSSSRIPQSDG 273

Query: 350  PMPDPYDDELSTPNIYNYQ-GVTNEDYNIVNTPMPNEMQAATPAXXXXXXXXXXXXXXXX 174
            P+PDPYDD LSTPNIYNYQ GV NEDYNIVNTPMPNEM AATPA                
Sbjct: 274  PIPDPYDDVLSTPNIYNYQGGVVNEDYNIVNTPMPNEMLAATPAPVQNDVIDDDEDEPLN 333

Query: 173  XXXXXXXXXXDQGEDLNTTHLVLAQFDKVTRTKSRWKCTLKDGIMHVNNKDILFNKA 3
                      D+GEDLNTTHLVLAQFDKVTRTKSRWKCTLKDGIMH+NNKDILFNKA
Sbjct: 334  EDDDDDGDELDEGEDLNTTHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKA 390


>emb|CDP09102.1| unnamed protein product [Coffea canephora]
          Length = 411

 Score =  437 bits (1125), Expect = e-120
 Identities = 231/366 (63%), Positives = 254/366 (69%), Gaps = 10/366 (2%)
 Frame = -1

Query: 1070 WELKMMQAGAILGPIDRSAKQKAAGGPVTPNPVHDLNVXXXXXXXXXXXTADXXXXXXXX 891
            WE+KMMQAGAILGPI+RS+  KA  G     PVHDLNV           TAD        
Sbjct: 43   WEMKMMQAGAILGPIERSSAPKATPGVT---PVHDLNVPYEGTEEYETPTADMLFPPTPL 99

Query: 890  XXXXXXXXPGMAQTPLPGTAQTPLPGTAQTPLPGNDSSSFYNIPTGGTPITPNEYSSNIE 711
                    PGMAQTPLPG AQTPLPGTAQTPLPG   SS YNIPTGGTPITPNEYSS  +
Sbjct: 100  QTPMPTPLPGMAQTPLPGNAQTPLPGTAQTPLPGTADSSLYNIPTGGTPITPNEYSSVND 159

Query: 710  NGGEGLIKAGTGRPSQYMQPPSSWMNQRPPLDVNVAYVEGREEGDKGAPNNPSTQDFFTM 531
            +GG   +K G GRPS YMQPPS W+NQRPPLDVNVAYVEGREEG++GA + P TQDFF M
Sbjct: 160  SGGAPEVKPGPGRPSPYMQPPSPWLNQRPPLDVNVAYVEGREEGERGASHQPMTQDFFMM 219

Query: 530  SSGKRKREDIPPQYRPGGYIPQQDGAGDVLSDVSKVGLGSISR---------MPVQERSS 378
            S+GKRKR++   QY  GGYIPQQDGAGD +S+  KVG GS ++         M +Q   +
Sbjct: 220  SAGKRKRDEFASQYPNGGYIPQQDGAGDTISNELKVGQGSNTQHNTTIAGAEMSLQGGRA 279

Query: 377  SGRIPQLDGPMPDPYDDELSTPNIYNYQGVTNEDYNIVNTPMPNEMQAATPAXXXXXXXX 198
              RI QLDGP+PDPYDD LSTPNIYNYQGV NEDYNIVNTP PN++QAATPA        
Sbjct: 280  VSRISQLDGPIPDPYDDVLSTPNIYNYQGVVNEDYNIVNTPAPNDIQAATPAAVTQNDTV 339

Query: 197  XXXXXXXXXXXXXXXXXXD-QGEDLNTTHLVLAQFDKVTRTKSRWKCTLKDGIMHVNNKD 21
                                QGEDLNTTHLVLAQFDKVTRTKSRWKCTLKDGIM +NNKD
Sbjct: 340  DDDEDEPLNEDDDDELDDVDQGEDLNTTHLVLAQFDKVTRTKSRWKCTLKDGIMRINNKD 399

Query: 20   ILFNKA 3
            ILFNKA
Sbjct: 400  ILFNKA 405


>ref|XP_006350788.1| PREDICTED: transcription initiation factor IIA large subunit-like
            [Solanum tuberosum]
          Length = 403

 Score =  414 bits (1065), Expect = e-113
 Identities = 225/364 (61%), Positives = 247/364 (67%), Gaps = 8/364 (2%)
 Frame = -1

Query: 1070 WELKMMQAGAILGPIDRSAKQKAA-GGPVTPNPVHDLNVXXXXXXXXXXXTADXXXXXXX 894
            WE+KMM AGAILG I+R++  KA  GGP+TP  VHDLN+           TAD       
Sbjct: 43   WEVKMMNAGAILGTIERNSAAKATPGGPITP--VHDLNMPYEGNEEYETPTADILFPPTP 100

Query: 893  XXXXXXXXXPGMAQTPLPGTAQTPLPGTAQTPLPGNDSSSFYNIPTGGTPITPNEYSSNI 714
                      G AQTPLPGT QTPLPGTAQTPLPG   SS YNIPTGGTP TP++YS   
Sbjct: 101  LQTPLP----GTAQTPLPGTVQTPLPGTAQTPLPGTADSSMYNIPTGGTPFTPSDYSPLN 156

Query: 713  ENGGEGLIKAGTGRPSQYMQPPSSWMNQRPPLDVNVAYVEGREE-GDKGAPNNPSTQDFF 537
            + GG   +KAG GRPS +M PPS W+NQRPPLDVNVAYVEGREE GD+G    P TQDFF
Sbjct: 157  DTGGATELKAGPGRPSPFMHPPSPWLNQRPPLDVNVAYVEGREEVGDRGGSQQPMTQDFF 216

Query: 536  TMSSGKRKREDIPPQYRPGGYIPQQDGAGDVLSDVSKVGLGS------ISRMPVQERSSS 375
              S+GKRKRED PPQY  GGYIPQQDGA D + D  K G GS      ++  PVQ  +S+
Sbjct: 217  MNSAGKRKREDFPPQYHNGGYIPQQDGAADSIYDNLKSGEGSNIQLELVTVGPVQ--ASA 274

Query: 374  GRIPQLDGPMPDPYDDELSTPNIYNYQGVTNEDYNIVNTPMPNEMQAATPAXXXXXXXXX 195
             RIPQ DGP+PD YDD LSTPNIY YQGV NEDYNIVNTP PN+MQA TPA         
Sbjct: 275  YRIPQFDGPIPDSYDDALSTPNIY-YQGVVNEDYNIVNTPAPNDMQAPTPAPALQNDDID 333

Query: 194  XXXXXXXXXXXXXXXXXDQGEDLNTTHLVLAQFDKVTRTKSRWKCTLKDGIMHVNNKDIL 15
                             DQGEDLNT HLVLAQFDKVTRTKSRWKCTLKDGIMH+NNKDIL
Sbjct: 334  DDDEPLNEDDDDDLDDVDQGEDLNTAHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDIL 393

Query: 14   FNKA 3
            FNKA
Sbjct: 394  FNKA 397


>ref|XP_004241212.1| PREDICTED: transcription initiation factor IIA large subunit [Solanum
            lycopersicum]
          Length = 401

 Score =  413 bits (1061), Expect = e-112
 Identities = 224/363 (61%), Positives = 246/363 (67%), Gaps = 7/363 (1%)
 Frame = -1

Query: 1070 WELKMMQAGAILGPIDRSAKQKAA-GGPVTPNPVHDLNVXXXXXXXXXXXTADXXXXXXX 894
            WE+KMM AGAILG I+R++  KA  GGP+TP  VHDLN+           TAD       
Sbjct: 43   WEVKMMNAGAILGTIERNSAAKATPGGPITP--VHDLNMPYEGNEEYETPTADILFPPTP 100

Query: 893  XXXXXXXXXPGMAQTPLPGTAQTPLPGTAQTPLPGNDSSSFYNIPTGGTPITPNEYSSNI 714
                      G AQTPLPGT QTPLPGTAQTPLPG   SS YNIPTGGTP TP++YS   
Sbjct: 101  LQTPLP----GTAQTPLPGTVQTPLPGTAQTPLPGTADSSMYNIPTGGTPFTPSDYSPLN 156

Query: 713  ENGGEGLIKAGTGRPSQYMQPPSSWMNQRPPLDVNVAYVEGREEGDKGAPNNPSTQDFFT 534
            + GG   +KAG GRPS +M PPS W+NQRPPLDVNVAYVEGREEGD+G    P TQDFF 
Sbjct: 157  DTGGATELKAGPGRPSPFMHPPSPWLNQRPPLDVNVAYVEGREEGDRGGSQQPMTQDFFM 216

Query: 533  MSSGKRKREDIPPQYRPGGYIPQQDGAGDVLSDVSKVGLGS------ISRMPVQERSSSG 372
             S+GKRKRED PPQY  GGYIPQQDGA D + D  K G GS      ++  PVQ  + + 
Sbjct: 217  NSTGKRKREDFPPQYHNGGYIPQQDGAADSIYDNIKSGEGSNIQLELVTVGPVQ--APAY 274

Query: 371  RIPQLDGPMPDPYDDELSTPNIYNYQGVTNEDYNIVNTPMPNEMQAATPAXXXXXXXXXX 192
            RIPQ DGP+PD YDD LSTPNIY YQGV NEDYNIVNTP PN+MQA TPA          
Sbjct: 275  RIPQFDGPIPDSYDDALSTPNIY-YQGVVNEDYNIVNTPAPNDMQAPTPA-PLQNDDIDD 332

Query: 191  XXXXXXXXXXXXXXXXDQGEDLNTTHLVLAQFDKVTRTKSRWKCTLKDGIMHVNNKDILF 12
                            DQGEDLNT HLVLAQFDKVTRTKSRWKCTLKDGIMH+NNKDILF
Sbjct: 333  DDEPLNEDDDDELDDVDQGEDLNTAHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILF 392

Query: 11   NKA 3
            NKA
Sbjct: 393  NKA 395


>ref|XP_009787287.1| PREDICTED: transcription initiation factor IIA large subunit-like
            [Nicotiana sylvestris]
          Length = 403

 Score =  407 bits (1045), Expect = e-110
 Identities = 219/361 (60%), Positives = 244/361 (67%), Gaps = 5/361 (1%)
 Frame = -1

Query: 1070 WELKMMQAGAILGPIDRSAKQKAA-GGPVTPNPVHDLNVXXXXXXXXXXXTADXXXXXXX 894
            WE+KMM AGAILG  +R+   K   GGP+T  PVHDLNV           TAD       
Sbjct: 43   WEMKMMHAGAILGTTERNPAPKGTPGGPIT-TPVHDLNVPYEGTEEYETPTADILFPPTP 101

Query: 893  XXXXXXXXXPGMAQTPLPGTAQTPLPGTAQTPLPGN-DSSSFYNIPTGG-TPITPNEYSS 720
                      G AQTPLPGT QTPLPGTAQTPLPG  DSSS YNIPTGG TP TPNEYSS
Sbjct: 102  LQTPLP----GTAQTPLPGTVQTPLPGTAQTPLPGTADSSSMYNIPTGGSTPFTPNEYSS 157

Query: 719  NIENGGEGLIKAGTGRPSQYMQPPSSWMNQRPPLDVNVAYVEGREEGDKGAPNNPSTQDF 540
              + GG   +K G GRPS +MQPPS W+NQRPPLDVNVAYVEGREE D+GA   P TQDF
Sbjct: 158  LNDTGGATQLKGGPGRPSPFMQPPSPWLNQRPPLDVNVAYVEGREEVDRGASQQPMTQDF 217

Query: 539  FTMSSGKRKREDIPPQYRPGGYIPQQDGAGDVLSDVSKVGLGSISRMPV--QERSSSGRI 366
            F  ++GKRKRED   QY  GGYIPQQDGA D + D+ K G G+  ++ +    ++++ RI
Sbjct: 218  FMTAAGKRKREDFASQYNNGGYIPQQDGAADSIYDIMKAGEGNTIQLELVTSIQAAASRI 277

Query: 365  PQLDGPMPDPYDDELSTPNIYNYQGVTNEDYNIVNTPMPNEMQAATPAXXXXXXXXXXXX 186
            PQ+DGP  D YD+ LSTPNIY YQGV NEDYNIVNTP PN+MQA TPA            
Sbjct: 278  PQVDGP-TDHYDEALSTPNIYGYQGVVNEDYNIVNTPAPNDMQAPTPAPVLQNDDVDDDD 336

Query: 185  XXXXXXXXXXXXXXDQGEDLNTTHLVLAQFDKVTRTKSRWKCTLKDGIMHVNNKDILFNK 6
                          DQGEDLNT HLVLAQFDKVTRTKSRWKCTLKDGIMH+NNKDILFNK
Sbjct: 337  EPLNENDDDDFDDVDQGEDLNTAHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNK 396

Query: 5    A 3
            A
Sbjct: 397  A 397


>ref|XP_009622244.1| PREDICTED: transcription initiation factor IIA large subunit
            {ECO:0000250|UniProtKB:P32773,
            ECO:0000312|EMBL:CAB57938.1}-like [Nicotiana
            tomentosiformis]
          Length = 401

 Score =  406 bits (1044), Expect = e-110
 Identities = 221/360 (61%), Positives = 245/360 (68%), Gaps = 4/360 (1%)
 Frame = -1

Query: 1070 WELKMMQAGAILGPIDRSAKQKAAGGPVTPNPVHDLNVXXXXXXXXXXXTADXXXXXXXX 891
            WE+KMM AGAILG  +R++  K  G P+T  PVHDLNV           TAD        
Sbjct: 43   WEMKMMHAGAILGTTERNSAPKGTG-PIT-TPVHDLNVPYEGTEEYETPTADILFPPTPL 100

Query: 890  XXXXXXXXPGMAQTPLPGTAQTPLPGTAQTPLPGN-DSSSFYNIPTGG-TPITPNEYSSN 717
                     G AQTPLPGTAQTPLPGTAQTPLPG  DSSS YNIPTGG TP TPNEYSS 
Sbjct: 101  QTPLP----GTAQTPLPGTAQTPLPGTAQTPLPGTADSSSMYNIPTGGSTPFTPNEYSSL 156

Query: 716  IENGGEGLIKAGTGRPSQYMQPPSSWMNQRPPLDVNVAYVEGREEGDKGAPNNPSTQDFF 537
             + GG   +K G GRPS +MQPPS W+NQRPPLDVNVAYVEGREE D+GA   P TQDFF
Sbjct: 157  NDTGGATEMKGGPGRPSPFMQPPSPWLNQRPPLDVNVAYVEGREEVDRGASQQPMTQDFF 216

Query: 536  TMSSGKRKREDIPPQYRPGGYIPQQDGAGDVLSDVSKVGLGSISRMPV--QERSSSGRIP 363
              ++GKRKRED   QY  GGYIPQQDGA D + D+ K G GS  ++ +    +++S RIP
Sbjct: 217  MTAAGKRKREDFASQYNNGGYIPQQDGAADSIYDIMKDGEGSNIQLELVTSIQAASSRIP 276

Query: 362  QLDGPMPDPYDDELSTPNIYNYQGVTNEDYNIVNTPMPNEMQAATPAXXXXXXXXXXXXX 183
            Q+DGP  D YD+ LSTPNIY YQGV NEDYNIVNTP PN+MQA TPA             
Sbjct: 277  QVDGP-TDHYDEALSTPNIYGYQGVVNEDYNIVNTPAPNDMQAPTPAPVLQNDDVDDDDE 335

Query: 182  XXXXXXXXXXXXXDQGEDLNTTHLVLAQFDKVTRTKSRWKCTLKDGIMHVNNKDILFNKA 3
                         DQGEDLNT HLVLAQFDKVTRTKSRWKCTLKDGIMH+NNKDILFNKA
Sbjct: 336  PLNENDDDDFDDVDQGEDLNTAHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKA 395


>ref|XP_012066966.1| PREDICTED: transcription initiation factor IIA large subunit
            [Jatropha curcas] gi|643735683|gb|KDP42211.1|
            hypothetical protein JCGZ_02941 [Jatropha curcas]
          Length = 407

 Score =  377 bits (969), Expect = e-102
 Identities = 213/373 (57%), Positives = 243/373 (65%), Gaps = 17/373 (4%)
 Frame = -1

Query: 1070 WELKMMQAGAILGPIDRSAKQKAA-GGPVTPNPVHDLNVXXXXXXXXXXXTADXXXXXXX 894
            WE+KMMQAG ILGPI+RS+  K   GGP+TP  VHDLNV           TA+       
Sbjct: 44   WEMKMMQAGVILGPIERSSAAKPVPGGPITP--VHDLNVPYEGPEEYETPTAEILFPPTP 101

Query: 893  XXXXXXXXXPGMAQTPLPGTAQTPLPGTAQTPLPGN-DSSSFYNIPTGGTPITPNEYSSN 717
                         QTPLPG+ QTPLPG  QTPLPG+ D+SS YNIPTG T    +EY + 
Sbjct: 102  LQTPI--------QTPLPGSVQTPLPGNGQTPLPGSADNSSMYNIPTGPT----SEYPTP 149

Query: 716  IENGGEGLIKAGTGRPSQYMQPPSSWMNQRPPLDVNVAYVEGREEGDKGAPNNPSTQDFF 537
            + + G G  +A  GRPS YMQ PS WMNQRPPLDVNVAYVEGREE D+G  + P TQDFF
Sbjct: 150  VSDTG-GSTEAKPGRPSPYMQAPSPWMNQRPPLDVNVAYVEGREEADRGNSHQPLTQDFF 208

Query: 536  TMSSGKRKREDIPPQYRPGGYIPQQDGAGDVLSDV--SKVGLGSISRMP------VQERS 381
             MSSGKRKRED   Q+  GG+IPQQDGAGDV S+   +  G GS+ R        ++  S
Sbjct: 209  MMSSGKRKREDFATQFNNGGFIPQQDGAGDVPSEALQASQGNGSLGRCDTITSANIEILS 268

Query: 380  SSGR----IPQLDGPMPDPYDDELSTPNIYNYQGVTNEDYNIVNTPMPNEMQAATPA--- 222
             + R    IPQLDGP+PDPYDD LSTPNIYNYQGV NEDYNI NTP PN++QA+TPA   
Sbjct: 269  HATRRVLKIPQLDGPIPDPYDDVLSTPNIYNYQGVVNEDYNIANTPAPNDIQASTPAVAP 328

Query: 221  XXXXXXXXXXXXXXXXXXXXXXXXXXDQGEDLNTTHLVLAQFDKVTRTKSRWKCTLKDGI 42
                                      +QGED+NT HLVLAQFDKVTRTKSRWKCTLKDGI
Sbjct: 329  QNDAVDDDDDEPLNEDDDDDDDLDDVEQGEDMNTQHLVLAQFDKVTRTKSRWKCTLKDGI 388

Query: 41   MHVNNKDILFNKA 3
            MH+NNKDILFNKA
Sbjct: 389  MHINNKDILFNKA 401


>ref|XP_002520518.1| protein with unknown function [Ricinus communis]
            gi|223540360|gb|EEF41931.1| protein with unknown function
            [Ricinus communis]
          Length = 383

 Score =  366 bits (939), Expect = 2e-98
 Identities = 204/363 (56%), Positives = 231/363 (63%), Gaps = 7/363 (1%)
 Frame = -1

Query: 1070 WELKMMQAGAILGPIDRSAKQKAAGGPVTPNPVHDLNVXXXXXXXXXXXTADXXXXXXXX 891
            WELKMMQAG I GPI+RS+  K   G V   PVHDLNV           TA+        
Sbjct: 44   WELKMMQAGVICGPIERSSGAKTVPGGVI-TPVHDLNVPYEGTEEYETPTAEIL------ 96

Query: 890  XXXXXXXXPGMAQTPLPGTAQTPLPGTAQTPLPGNDSSSFYNIPTGGTPITPNEYSSNIE 711
                         TPLPGTAQTPLPG+        D+SS YNIPTG T    +EY + + 
Sbjct: 97   ----------FPPTPLPGTAQTPLPGSV-------DNSSMYNIPTGPT----SEYPTPVS 135

Query: 710  NGGEGLIKAGTGRPSQYMQPPSSWMNQRPPLDVNVAYVEGREEGDKGAPNNPSTQDFFTM 531
            + G G  +A  GRPS YMQPPS W+NQRPPLDVN+AYVEGREE D+G  N P TQDFFT 
Sbjct: 136  DSG-GSTEAKAGRPSPYMQPPSPWINQRPPLDVNIAYVEGREEADRGTSNQPLTQDFFTG 194

Query: 530  SSGKRKREDIPPQYRPGGYIPQQDGAGDVLSDVSKVGLGSISRMPVQERSSSGR----IP 363
            +SGKRKRED   QY  GG+IPQQDGAGD   +V +V   ++    ++  SS  R    IP
Sbjct: 195  ASGKRKREDFAAQYNNGGFIPQQDGAGDTPFEVLQVERDTVISADIEILSSVTRRGLKIP 254

Query: 362  QLDGPMPDPYDDELSTPNIYNYQGVTNEDYNIVNTPMPNEMQAATPA---XXXXXXXXXX 192
            QLDGP+PDPYDD LSTPNIYNYQGV NEDYNI NTP PN++QA+TPA             
Sbjct: 255  QLDGPIPDPYDDVLSTPNIYNYQGVANEDYNIANTPAPNDLQASTPAIIPQNDVVDDDDD 314

Query: 191  XXXXXXXXXXXXXXXXDQGEDLNTTHLVLAQFDKVTRTKSRWKCTLKDGIMHVNNKDILF 12
                            DQGED+NT HLVLAQFDKVTRTKSRWKCTLKDGIMH+NNKDILF
Sbjct: 315  EPLNEDDDDDDDLDDVDQGEDMNTQHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILF 374

Query: 11   NKA 3
            NKA
Sbjct: 375  NKA 377


>gb|KDO66627.1| hypothetical protein CISIN_1g015442mg [Citrus sinensis]
          Length = 406

 Score =  350 bits (897), Expect = 1e-93
 Identities = 208/377 (55%), Positives = 240/377 (63%), Gaps = 21/377 (5%)
 Frame = -1

Query: 1070 WELKMMQAGAILGPIDRSA--KQKAAGGPVTPNPVHDLNVXXXXXXXXXXXTADXXXXXX 897
            WE+KM+QAG I   IDR++  KQ A GGP+TP  VHDLNV           TA+      
Sbjct: 42   WEMKMIQAGVI---IDRTSAPKQPAPGGPITP--VHDLNVPYEGTEEYETPTAEILFPPT 96

Query: 896  XXXXXXXXXXPGMAQTPLPGTAQTPLPGTAQTPLPGNDSSSFYNIPTGGTPITPNEYSSN 717
                      PG   TPLPG+  TPLPG+  TPLPG   +S YNIPTG +   P   S  
Sbjct: 97   PLQTPIQTPLPG--STPLPGS--TPLPGS--TPLPGTADNSTYNIPTGSSDY-PTPAS-- 147

Query: 716  IENGGEGLIKAGTGRPSQYMQPPSS-WMNQRPPL--DVNVAYVEGREEGDKGAPNNPSTQ 546
             ++GG    K+G GRPS YM PP S WMN RPPL  DVNVAYVEGR+E D+G  + P TQ
Sbjct: 148  -DSGGNTEAKSGNGRPSSYMPPPPSPWMNPRPPLSVDVNVAYVEGRDEADRGTSHQPLTQ 206

Query: 545  DFFTMSSGKRKREDIPPQYRPGGY-IPQQDGAGDVLSDVSKVGLGSISRMPVQE------ 387
            DFFTMS+GKRKRED P QY  GGY IPQQDGAGD +S++ ++    +S  P ++      
Sbjct: 207  DFFTMSAGKRKREDFPAQYHNGGYNIPQQDGAGDAMSEIFEL---EVSEFPGRQDSVTTA 263

Query: 386  --------RSSSGRIPQLDGPMPDPYDDELSTPNIYNYQGVTNEDYNIVNTPMPNEMQAA 231
                     SSS +IPQLDGP+PDPYDD LSTPNIYNYQGV NEDYNIVNTP PN++QA+
Sbjct: 264  NREIFANLASSSVKIPQLDGPIPDPYDDVLSTPNIYNYQGVVNEDYNIVNTPAPNDIQAS 323

Query: 230  TPA-XXXXXXXXXXXXXXXXXXXXXXXXXXDQGEDLNTTHLVLAQFDKVTRTKSRWKCTL 54
            TPA                           DQGE+LNT HLVLAQFDKVTRTKSRWKC L
Sbjct: 324  TPAVVTQNDAAEDDDDEPLNENDDDELDDVDQGEELNTQHLVLAQFDKVTRTKSRWKCAL 383

Query: 53   KDGIMHVNNKDILFNKA 3
            KDGIMH+NNKDILFNKA
Sbjct: 384  KDGIMHINNKDILFNKA 400


>gb|KDO66626.1| hypothetical protein CISIN_1g015442mg [Citrus sinensis]
          Length = 386

 Score =  350 bits (897), Expect = 1e-93
 Identities = 208/377 (55%), Positives = 240/377 (63%), Gaps = 21/377 (5%)
 Frame = -1

Query: 1070 WELKMMQAGAILGPIDRSA--KQKAAGGPVTPNPVHDLNVXXXXXXXXXXXTADXXXXXX 897
            WE+KM+QAG I   IDR++  KQ A GGP+TP  VHDLNV           TA+      
Sbjct: 22   WEMKMIQAGVI---IDRTSAPKQPAPGGPITP--VHDLNVPYEGTEEYETPTAEILFPPT 76

Query: 896  XXXXXXXXXXPGMAQTPLPGTAQTPLPGTAQTPLPGNDSSSFYNIPTGGTPITPNEYSSN 717
                      PG   TPLPG+  TPLPG+  TPLPG   +S YNIPTG +   P   S  
Sbjct: 77   PLQTPIQTPLPG--STPLPGS--TPLPGS--TPLPGTADNSTYNIPTGSSDY-PTPAS-- 127

Query: 716  IENGGEGLIKAGTGRPSQYMQPPSS-WMNQRPPL--DVNVAYVEGREEGDKGAPNNPSTQ 546
             ++GG    K+G GRPS YM PP S WMN RPPL  DVNVAYVEGR+E D+G  + P TQ
Sbjct: 128  -DSGGNTEAKSGNGRPSSYMPPPPSPWMNPRPPLSVDVNVAYVEGRDEADRGTSHQPLTQ 186

Query: 545  DFFTMSSGKRKREDIPPQYRPGGY-IPQQDGAGDVLSDVSKVGLGSISRMPVQE------ 387
            DFFTMS+GKRKRED P QY  GGY IPQQDGAGD +S++ ++    +S  P ++      
Sbjct: 187  DFFTMSAGKRKREDFPAQYHNGGYNIPQQDGAGDAMSEIFEL---EVSEFPGRQDSVTTA 243

Query: 386  --------RSSSGRIPQLDGPMPDPYDDELSTPNIYNYQGVTNEDYNIVNTPMPNEMQAA 231
                     SSS +IPQLDGP+PDPYDD LSTPNIYNYQGV NEDYNIVNTP PN++QA+
Sbjct: 244  NREIFANLASSSVKIPQLDGPIPDPYDDVLSTPNIYNYQGVVNEDYNIVNTPAPNDIQAS 303

Query: 230  TPA-XXXXXXXXXXXXXXXXXXXXXXXXXXDQGEDLNTTHLVLAQFDKVTRTKSRWKCTL 54
            TPA                           DQGE+LNT HLVLAQFDKVTRTKSRWKC L
Sbjct: 304  TPAVVTQNDAAEDDDDEPLNENDDDELDDVDQGEELNTQHLVLAQFDKVTRTKSRWKCAL 363

Query: 53   KDGIMHVNNKDILFNKA 3
            KDGIMH+NNKDILFNKA
Sbjct: 364  KDGIMHINNKDILFNKA 380


>ref|XP_006424899.1| hypothetical protein CICLE_v10028561mg [Citrus clementina]
            gi|568870376|ref|XP_006488381.1| PREDICTED: transcription
            initiation factor IIA subunit 1-like [Citrus sinensis]
            gi|557526833|gb|ESR38139.1| hypothetical protein
            CICLE_v10028561mg [Citrus clementina]
          Length = 406

 Score =  348 bits (892), Expect = 6e-93
 Identities = 207/377 (54%), Positives = 239/377 (63%), Gaps = 21/377 (5%)
 Frame = -1

Query: 1070 WELKMMQAGAILGPIDRSA--KQKAAGGPVTPNPVHDLNVXXXXXXXXXXXTADXXXXXX 897
            WE+KM+QAG I   IDR++  KQ A GGP+TP  VHDLNV           TA+      
Sbjct: 42   WEMKMIQAGVI---IDRTSAPKQPAPGGPITP--VHDLNVPYEGTEEYETPTAEILFPPT 96

Query: 896  XXXXXXXXXXPGMAQTPLPGTAQTPLPGTAQTPLPGNDSSSFYNIPTGGTPITPNEYSSN 717
                      PG   TPLPG+  TPLPG+  TPLPG   +S YNIPTG +   P   S  
Sbjct: 97   PLQTPIQTPLPG--STPLPGS--TPLPGS--TPLPGTADNSTYNIPTGSSDY-PTPAS-- 147

Query: 716  IENGGEGLIKAGTGRPSQYMQPPSS-WMNQRPPL--DVNVAYVEGREEGDKGAPNNPSTQ 546
             ++GG    K+G GRPS YM PP S WMN RPPL  DVNVAYVEGR+E D+G  + P TQ
Sbjct: 148  -DSGGNTEAKSGNGRPSSYMPPPPSPWMNPRPPLSVDVNVAYVEGRDEADRGTSHQPLTQ 206

Query: 545  DFFTMSSGKRKREDIPPQYRPGGY-IPQQDGAGDVLSDVSKVGLGSISRMPVQE------ 387
            DFFTMS+GKRKRED P QY  GGY IPQQDGAGD + ++ ++    +S  P ++      
Sbjct: 207  DFFTMSAGKRKREDFPAQYHNGGYNIPQQDGAGDAMPEIFEL---EVSEFPGRQDSVTTA 263

Query: 386  --------RSSSGRIPQLDGPMPDPYDDELSTPNIYNYQGVTNEDYNIVNTPMPNEMQAA 231
                     SSS +IPQLDGP+PDPYDD LSTPNIYNYQGV NEDYNIVNTP PN++QA+
Sbjct: 264  NREIFANLASSSVKIPQLDGPIPDPYDDVLSTPNIYNYQGVVNEDYNIVNTPAPNDIQAS 323

Query: 230  TPA-XXXXXXXXXXXXXXXXXXXXXXXXXXDQGEDLNTTHLVLAQFDKVTRTKSRWKCTL 54
            TPA                           DQGE+LNT HLVLAQFDKVTRTKSRWKC L
Sbjct: 324  TPAVVTQNDAAEDDDDEPLNENDDDELDDVDQGEELNTQHLVLAQFDKVTRTKSRWKCAL 383

Query: 53   KDGIMHVNNKDILFNKA 3
            KDGIMH+NNKDILFNKA
Sbjct: 384  KDGIMHINNKDILFNKA 400


>ref|XP_010685693.1| PREDICTED: transcription initiation factor IIA large subunit [Beta
            vulgaris subsp. vulgaris] gi|870853304|gb|KMT05185.1|
            hypothetical protein BVRB_7g173320 [Beta vulgaris subsp.
            vulgaris]
          Length = 389

 Score =  345 bits (884), Expect = 5e-92
 Identities = 201/373 (53%), Positives = 230/373 (61%), Gaps = 17/373 (4%)
 Frame = -1

Query: 1070 WELKMMQAGAILGPIDRSAKQKAAGGPVTPNPVHDLNVXXXXXXXXXXXTADXXXXXXXX 891
            WELKMMQAGA+L P +R    K   G     PVHDLNV           TA+        
Sbjct: 43   WELKMMQAGAVLQPSERPTVPKPVPGAAI-TPVHDLNVPYEGTEEYETPTAEML------ 95

Query: 890  XXXXXXXXPGMAQTPLPGTAQTPLPGTAQTPLPGNDSSSFYNIPTGGTPITPNEYSSNIE 711
                         TPL    QTP+    QTPLPG   SS YNIPTG     P++Y +   
Sbjct: 96   ----------FPPTPL----QTPI----QTPLPGTADSSMYNIPTG-----PSDYPTPTS 132

Query: 710  NGGEGL---IKAGTGRPSQYMQPPSSWMNQRPPL--DVNVAYVEGREEGDKGAPNNPSTQ 546
            N G G+   IK G GRPS YMQPPS WMNQRPPL  DVNVAYVEGREE D+G+ + P+TQ
Sbjct: 133  NEGVGVPNDIKPGVGRPSPYMQPPSPWMNQRPPLGVDVNVAYVEGREEVDRGS-SQPATQ 191

Query: 545  DFFTMSSGKRKREDIPPQYRPGGYIPQQDGAGDVLSDVSKVGL---------GSISRMPV 393
            DFFT  +GKRKR++ PPQY+ GGYIPQQDGAGD   DV ++ +         G +     
Sbjct: 192  DFFTGPTGKRKRDEFPPQYQGGGYIPQQDGAGDAAGDVFELEIIQSKSLGRSGVVKVTSA 251

Query: 392  QERSSSGRIPQLDGPMPDPYDDELSTPNIYNYQGVTNEDYNIVNTPMPNEMQAATPAXXX 213
             ++ SS RIPQLDGP+PDPY+D LSTPNIYNYQ V NEDYN+VNTP PN++QA TPA   
Sbjct: 252  LQKGSSSRIPQLDGPIPDPYEDMLSTPNIYNYQPV-NEDYNVVNTPAPNDLQAGTPAPPI 310

Query: 212  XXXXXXXXXXXXXXXXXXXXXXXD---QGEDLNTTHLVLAQFDKVTRTKSRWKCTLKDGI 42
                                   D   QGE+LNT HLVLAQFDKVTRTKSRWKCTLKDGI
Sbjct: 311  QNDLGDENGDDEPPLNENDDDDLDDIDQGEELNTQHLVLAQFDKVTRTKSRWKCTLKDGI 370

Query: 41   MHVNNKDILFNKA 3
            MH+NNKDILFNKA
Sbjct: 371  MHINNKDILFNKA 383


>gb|KDO66628.1| hypothetical protein CISIN_1g015442mg [Citrus sinensis]
          Length = 363

 Score =  343 bits (881), Expect = 1e-91
 Identities = 206/375 (54%), Positives = 238/375 (63%), Gaps = 21/375 (5%)
 Frame = -1

Query: 1064 LKMMQAGAILGPIDRSA--KQKAAGGPVTPNPVHDLNVXXXXXXXXXXXTADXXXXXXXX 891
            +KM+QAG I   IDR++  KQ A GGP+TP  VHDLNV           TA+        
Sbjct: 1    MKMIQAGVI---IDRTSAPKQPAPGGPITP--VHDLNVPYEGTEEYETPTAEILFPPTPL 55

Query: 890  XXXXXXXXPGMAQTPLPGTAQTPLPGTAQTPLPGNDSSSFYNIPTGGTPITPNEYSSNIE 711
                    PG   TPLPG+  TPLPG+  TPLPG   +S YNIPTG +   P   S   +
Sbjct: 56   QTPIQTPLPG--STPLPGS--TPLPGS--TPLPGTADNSTYNIPTGSSDY-PTPAS---D 105

Query: 710  NGGEGLIKAGTGRPSQYMQPPSS-WMNQRPPL--DVNVAYVEGREEGDKGAPNNPSTQDF 540
            +GG    K+G GRPS YM PP S WMN RPPL  DVNVAYVEGR+E D+G  + P TQDF
Sbjct: 106  SGGNTEAKSGNGRPSSYMPPPPSPWMNPRPPLSVDVNVAYVEGRDEADRGTSHQPLTQDF 165

Query: 539  FTMSSGKRKREDIPPQYRPGGY-IPQQDGAGDVLSDVSKVGLGSISRMPVQE-------- 387
            FTMS+GKRKRED P QY  GGY IPQQDGAGD +S++ ++    +S  P ++        
Sbjct: 166  FTMSAGKRKREDFPAQYHNGGYNIPQQDGAGDAMSEIFEL---EVSEFPGRQDSVTTANR 222

Query: 386  ------RSSSGRIPQLDGPMPDPYDDELSTPNIYNYQGVTNEDYNIVNTPMPNEMQAATP 225
                   SSS +IPQLDGP+PDPYDD LSTPNIYNYQGV NEDYNIVNTP PN++QA+TP
Sbjct: 223  EIFANLASSSVKIPQLDGPIPDPYDDVLSTPNIYNYQGVVNEDYNIVNTPAPNDIQASTP 282

Query: 224  A-XXXXXXXXXXXXXXXXXXXXXXXXXXDQGEDLNTTHLVLAQFDKVTRTKSRWKCTLKD 48
            A                           DQGE+LNT HLVLAQFDKVTRTKSRWKC LKD
Sbjct: 283  AVVTQNDAAEDDDDEPLNENDDDELDDVDQGEELNTQHLVLAQFDKVTRTKSRWKCALKD 342

Query: 47   GIMHVNNKDILFNKA 3
            GIMH+NNKDILFNKA
Sbjct: 343  GIMHINNKDILFNKA 357


>ref|XP_011032247.1| PREDICTED: transcription initiation factor IIA subunit 1-like isoform
            X1 [Populus euphratica]
          Length = 408

 Score =  343 bits (879), Expect = 2e-91
 Identities = 205/378 (54%), Positives = 235/378 (62%), Gaps = 22/378 (5%)
 Frame = -1

Query: 1070 WELKMMQAGAILGPIDRSAKQK--AAGGPVTPNPVHDLNVXXXXXXXXXXXTADXXXXXX 897
            WE KMMQAGAI G  +RS+  K    GGP+TP  VHDLNV           TA+      
Sbjct: 44   WEAKMMQAGAICGTAERSSANKLPVPGGPITP--VHDLNVPYEGTEEYETPTAEMLFPPT 101

Query: 896  XXXXXXXXXXPGMAQTPLPGTAQTPLPGTAQTPLPGN-DSSSFYNIPTGGTPI-TPNEYS 723
                          QTPLPG+AQTPLPG AQTPLPG+ D+SS YNIPTG +   TP    
Sbjct: 102  PMQTPM--------QTPLPGSAQTPLPGNAQTPLPGSVDNSSMYNIPTGSSDYPTPGS-- 151

Query: 722  SNIENGGEGLIKAGTGRPSQYMQPPSSWMNQRPPL--DVNVAYVEGREEGDKGAPNNPST 549
               + GG    KAG  RPS +MQPP+ WM+QRPPL  DVNVAYVEGR+E D+G  +   T
Sbjct: 152  ---DTGGSTDGKAG--RPSPFMQPPT-WMHQRPPLSVDVNVAYVEGRDEVDRGTSHQTLT 205

Query: 548  QDFFTMSSGKRKREDIPPQYRPGGYIPQQDGAGDVLSDVSKVGLGS----------ISRM 399
            QDFF M SGKRKRED  P+Y  GG+IPQQDGAGD  S+VS+V  G+              
Sbjct: 206  QDFF-MPSGKRKREDFAPKYNNGGFIPQQDGAGDSASEVSQVSQGNDPLGRCDTSTTKNK 264

Query: 398  PVQERSSSG--RIPQLDGPMPDPYDDELSTPNIYNYQGVTNEDYNIVNTPMPNEMQAATP 225
             +  R S    +IPQ+DGP+PDPYDD +STPNIYNYQGV NEDYNI NTP PN++ A+TP
Sbjct: 265  VILARVSRSYLKIPQVDGPIPDPYDDVVSTPNIYNYQGVANEDYNIANTPAPNDLLASTP 324

Query: 224  A----XXXXXXXXXXXXXXXXXXXXXXXXXXDQGEDLNTTHLVLAQFDKVTRTKSRWKCT 57
            A                              DQGE+LNT HLVLAQFDKVTRTKSRWKC 
Sbjct: 325  AVVSQNDVADDDDDDEPLNEDDDDDEDLDEVDQGEELNTQHLVLAQFDKVTRTKSRWKCI 384

Query: 56   LKDGIMHVNNKDILFNKA 3
            LKDGIMH+NNKDILFNKA
Sbjct: 385  LKDGIMHINNKDILFNKA 402


>ref|XP_002282322.1| PREDICTED: transcription initiation factor IIA subunit 1 [Vitis
            vinifera] gi|297746029|emb|CBI16085.3| unnamed protein
            product [Vitis vinifera]
          Length = 393

 Score =  342 bits (876), Expect = 4e-91
 Identities = 199/375 (53%), Positives = 226/375 (60%), Gaps = 19/375 (5%)
 Frame = -1

Query: 1070 WELKMMQAGAILGPIDRS-AKQKAAGGPVTPNPVHDLNVXXXXXXXXXXXTADXXXXXXX 894
            WE+KM+QAG + GPI+RS A ++ +G P    PVHDLNV           TA+       
Sbjct: 44   WEMKMVQAGVVTGPIERSTAPKQTSGAPAPTPPVHDLNVPYEGTEEYETPTAEIL----- 98

Query: 893  XXXXXXXXXPGMAQTPLPGTAQTPLPGTAQTPLPGNDSSSFYNIPTGGTPITPNEYSSNI 714
                          TPL    QTP+    QTPLPG   +S YNIPTG     P EY +  
Sbjct: 99   -----------FPPTPL----QTPI----QTPLPGMGDNSMYNIPTG-----PTEYPAAQ 134

Query: 713  ENGGEGLIKAGTGRPSQYMQPPSSWMNQRPPL--DVNVAYVEGREEGDKGAPNNPSTQDF 540
            + GG   +K  +GRP  YM PPS WM QRPPL  DVNVAYVEGR+EGD+G    P TQDF
Sbjct: 135  DGGGATDMK--SGRPPSYMPPPSPWMQQRPPLSVDVNVAYVEGRDEGDRGNSQQPLTQDF 192

Query: 539  FTMSSGKRKREDIPPQYRPGGYIPQQDGAGDVLSDVSKV----GLGSISRMPV------- 393
            F MSSGKRKRED P QY   GYIPQQDGAGD   +V +V    G  SI    +       
Sbjct: 193  FMMSSGKRKREDFPSQYHTSGYIPQQDGAGDPAPEVFEVEVSQGSNSIKGHDILTKANRE 252

Query: 392  ---QERSSSGRIPQLDGPMPDPYDDELSTPNIYNYQGVTNEDYNIVNTPMPNEMQAATPA 222
               Q   S  RIPQLDGP+PDPY+D LSTPNIYNYQGV NEDYNIVNTP PN++QA TPA
Sbjct: 253  IFPQVAGSYVRIPQLDGPIPDPYEDVLSTPNIYNYQGVVNEDYNIVNTPAPNDIQAGTPA 312

Query: 221  --XXXXXXXXXXXXXXXXXXXXXXXXXXDQGEDLNTTHLVLAQFDKVTRTKSRWKCTLKD 48
                                        +QGE+LNT HLVLAQFDKVTRTKS+WKCTLKD
Sbjct: 313  VGIQNDVGDDDDDEPPLNENDDDDLDDVEQGEELNTQHLVLAQFDKVTRTKSKWKCTLKD 372

Query: 47   GIMHVNNKDILFNKA 3
            GIMH+NNKDILFNKA
Sbjct: 373  GIMHINNKDILFNKA 387


>ref|XP_006369542.1| hypothetical protein POPTR_0001s25120g [Populus trichocarpa]
            gi|550348134|gb|ERP66111.1| hypothetical protein
            POPTR_0001s25120g [Populus trichocarpa]
          Length = 405

 Score =  340 bits (871), Expect = 2e-90
 Identities = 199/374 (53%), Positives = 230/374 (61%), Gaps = 18/374 (4%)
 Frame = -1

Query: 1070 WELKMMQAGAILGPIDRSA--KQKAAGGPVTPNPVHDLNVXXXXXXXXXXXTADXXXXXX 897
            WE K+MQAG + GPI RS+  KQ   GG     PVHDLNV           TA+      
Sbjct: 43   WEKKLMQAGVLSGPIVRSSANKQLVPGGLT---PVHDLNVPYEGTEEYETPTAEILFPPT 99

Query: 896  XXXXXXXXXXPGMAQTPLPGTAQTPLPGTAQTPLPGN-DSSSFYNIPTGGTPITPNEYSS 720
                       G AQTPLPG  QTPLPG   TPLPG+ D+SS YNI TG +   P   S 
Sbjct: 100  PLP--------GSAQTPLPGNVQTPLPGNVPTPLPGSVDNSSMYNISTGSSSDYPTPVS- 150

Query: 719  NIENGGEGLIKAGTGRPSQYMQPPSSWMNQRPPLDVNVAYVEGREEGDKGAPNNPSTQDF 540
              + GG   +KAG  RPS +MQ PS  M+QRPPLDVNVAYVEGR+E D+G  +   TQDF
Sbjct: 151  --DAGGSTDVKAG--RPSHFMQSPSPLMHQRPPLDVNVAYVEGRDEVDRGGSHQTLTQDF 206

Query: 539  FTMSSGKRKREDIPPQYRPGGYIPQQDGAGDVLSDVSKVGLGS----------ISRMPVQ 390
            F MSSGKRKR D  P+Y  GG+IPQQDGA D  S+VS+V  G+               + 
Sbjct: 207  F-MSSGKRKRGDFAPKYNNGGFIPQQDGAVDSASEVSQVSQGNNPHGRCDTITTKNREIL 265

Query: 389  ERSSSG--RIPQLDGPMPDPYDDELSTPNIYNYQGVTNEDYNIVNTPMPNEMQAATPAXX 216
             R S    +IPQ+DGP+PDPYDD LSTPNIYNYQGV NEDYNI NTP PN++QA+TPA  
Sbjct: 266  ARVSRSYVKIPQVDGPIPDPYDDMLSTPNIYNYQGVANEDYNIANTPAPNDLQASTPAVV 325

Query: 215  XXXXXXXXXXXXXXXXXXXXXXXXD---QGEDLNTTHLVLAQFDKVTRTKSRWKCTLKDG 45
                                    D   QGE+LNT HL+LAQFDKVTRTKSRWKCTLKDG
Sbjct: 326  SQNDDVDDDDDEPLNEDDDDDEDLDGVDQGEELNTQHLILAQFDKVTRTKSRWKCTLKDG 385

Query: 44   IMHVNNKDILFNKA 3
            +MH+NN+DILFNKA
Sbjct: 386  VMHINNRDILFNKA 399


>ref|XP_007016334.1| Transcription initiation factor IIA subunit 1 [Theobroma cacao]
            gi|508786697|gb|EOY33953.1| Transcription initiation
            factor IIA subunit 1 [Theobroma cacao]
          Length = 393

 Score =  339 bits (869), Expect = 3e-90
 Identities = 202/377 (53%), Positives = 229/377 (60%), Gaps = 21/377 (5%)
 Frame = -1

Query: 1070 WELKMMQAGAILGPIDRSA--KQKAAGGPVTPNPVHDLNVXXXXXXXXXXXTADXXXXXX 897
            WE+KMMQAG + GPI+RS+  KQ   GGP+TP  VHDLNV           TAD      
Sbjct: 43   WEMKMMQAGVVCGPIERSSGQKQPTPGGPITP--VHDLNVPYEGPEEYETPTADML---- 96

Query: 896  XXXXXXXXXXPGMAQTPLPGTAQTPLPGTAQTPLPGNDSSSFYNIPTGGTPITPNEYSSN 717
                           TPL    QTP+P    TPLPG+   S YNIPTG +     +Y + 
Sbjct: 97   ------------FPPTPL----QTPVP----TPLPGSADGSMYNIPTGSS-----DYPTP 131

Query: 716  IENGGEGLIKAGTGRPSQYMQPPSSWMNQRPPL--DVNVAYVEGREEGDKGAPNNPSTQD 543
            + +GG G   A   RPS YMQ PS W NQR PL  DVNVAYVEGR+E D+G  + P TQD
Sbjct: 132  VTDGG-GNTDAKGARPSPYMQSPSPWPNQRTPLSVDVNVAYVEGRDEVDRGPSHQPLTQD 190

Query: 542  FFTMSSGKRKREDIPPQYRPGG-YIPQQDGAGDVLSDVSKV----GLGSISRMPVQERS- 381
            FF MSSGKRKRED   QY  GG YIPQQDGAGD + +V+K     G   + R      + 
Sbjct: 191  FFMMSSGKRKREDFTTQYHNGGGYIPQQDGAGDAIYEVAKAEGSKGSDFLDRRDSTTTAK 250

Query: 380  ---------SSGRIPQLDGPMPDPYDDELSTPNIYNYQGVTNEDYNIVNTPMPNEMQAAT 228
                     SS +IPQLDGP+PDPYDD LSTPNIYNYQGV NEDYN+VNTP PN++QAAT
Sbjct: 251  SEILAHLARSSSKIPQLDGPIPDPYDDMLSTPNIYNYQGVVNEDYNVVNTPAPNDLQAAT 310

Query: 227  PAXXXXXXXXXXXXXXXXXXXXXXXXXXD--QGEDLNTTHLVLAQFDKVTRTKSRWKCTL 54
            PA                          D  QGE+LNT HLVLAQFDKVTRTKSRWKCTL
Sbjct: 311  PAPVAQNDTGDDDDDEPLNEDDDDDELDDVDQGEELNTQHLVLAQFDKVTRTKSRWKCTL 370

Query: 53   KDGIMHVNNKDILFNKA 3
            KDGIMH+NNKDILFNKA
Sbjct: 371  KDGIMHINNKDILFNKA 387


>ref|XP_012475136.1| PREDICTED: transcription initiation factor IIA large subunit-like
            [Gossypium raimondii] gi|763741415|gb|KJB08914.1|
            hypothetical protein B456_001G112500 [Gossypium
            raimondii]
          Length = 391

 Score =  338 bits (866), Expect = 6e-90
 Identities = 203/378 (53%), Positives = 227/378 (60%), Gaps = 22/378 (5%)
 Frame = -1

Query: 1070 WELKMMQAGAILGPIDRSA-KQKAAGGPVTPNPVHDLNVXXXXXXXXXXXTADXXXXXXX 894
            WE KMMQAG ILGPI+RS+ KQ   G  +TP  VHDLNV           TAD       
Sbjct: 43   WEAKMMQAGVILGPIERSSQKQPTPGSAITP--VHDLNVPYEGTEEYETPTADML----- 95

Query: 893  XXXXXXXXXPGMAQTPLPGTAQTPLPGTAQTPLPGNDSSSFYNIPTGGT--PITPNEYSS 720
                          TPL    QTP+P    TPLPG+   S YNIPTGG+  P   N+  S
Sbjct: 96   -----------FPPTPL----QTPVP----TPLPGSADGSMYNIPTGGSDYPTPVNDNGS 136

Query: 719  NIENGGEGLIKAGTGRPSQYMQPPSSWMNQRPPL--DVNVAYVEGREEGDKGAPNNPSTQ 546
            N +  G        GRPS YMQ PS W NQR PL  DVNVAYVEGREE D+G  N P TQ
Sbjct: 137  NADIKG--------GRPSPYMQSPSPWSNQRTPLSVDVNVAYVEGREEVDRGTSNQPLTQ 188

Query: 545  DFFTMSSGKRKREDIPPQYRPGGYIPQQDGAGDVLSDVSKVG--------------LGSI 408
            DFF MSSGKRKRED   QY+ GGYIPQQDGAGD  S+V+K                  + 
Sbjct: 189  DFFMMSSGKRKREDFA-QYQNGGYIPQQDGAGDATSEVAKAEGSRGGNFLDRRHSTTTAK 247

Query: 407  SRMPVQERSSSGRIPQLDGPMPDPYDDELSTPNIYNYQGVTNEDYNIVNTPMPNEMQAAT 228
            S+   +   SS +IPQLDGP+PD Y+D LSTPNIYNYQGV NEDYN+VNTP PN++QA+T
Sbjct: 248  SKFLAELARSSSKIPQLDGPIPDSYEDMLSTPNIYNYQGVVNEDYNVVNTPAPNDLQAST 307

Query: 227  PA---XXXXXXXXXXXXXXXXXXXXXXXXXXDQGEDLNTTHLVLAQFDKVTRTKSRWKCT 57
            PA                             DQGE+LNT HLVLAQFDKVTRTKSRWKCT
Sbjct: 308  PAPAPQNDIVDDDDDEPLNEDDDDEDDLDDVDQGEELNTQHLVLAQFDKVTRTKSRWKCT 367

Query: 56   LKDGIMHVNNKDILFNKA 3
            LKDGIMH+NNKDILFNKA
Sbjct: 368  LKDGIMHINNKDILFNKA 385


>ref|XP_009375942.1| PREDICTED: transcription initiation factor IIA large subunit [Pyrus x
            bretschneideri]
          Length = 387

 Score =  337 bits (864), Expect = 1e-89
 Identities = 194/368 (52%), Positives = 229/368 (62%), Gaps = 12/368 (3%)
 Frame = -1

Query: 1070 WELKMMQAGAILGPIDRSAKQKAAGGPVTPNPVHDLNVXXXXXXXXXXXTADXXXXXXXX 891
            WE K MQAG +  PI+RSA +   G  VTP  VHDLNV           TA+        
Sbjct: 41   WEAKTMQAGVVNNPIERSAAKGTPGSGVTP--VHDLNVPYEGTEEYETPTAEIL------ 92

Query: 890  XXXXXXXXPGMAQTPLPGTAQTPLPGTA-QTPLPGNDSSSFYNIPTGGTPITPNEYSSNI 714
                         TPL    QTP+P T  QTPLPG    + YNIPTGG+  + NE  S+ 
Sbjct: 93   ----------FPPTPL----QTPIPATPIQTPLPGT-GDNLYNIPTGGSDYSANESGSS- 136

Query: 713  ENGGEGLIKAGTGRPSQYMQPPSSWMNQRPPLDVNVAYVEGREEGDKGAPNNPSTQDFFT 534
             NGG      G GRPS YMQPPS+WMN RPPLDVN+AYVEGR+E D+GA + P TQDF  
Sbjct: 137  -NGGVNAETKG-GRPSPYMQPPSTWMNHRPPLDVNIAYVEGRDEVDRGASHQPPTQDFLQ 194

Query: 533  MSSGKRKREDIPPQYRPGGYIPQQDGAGDVLSDVSKV----GLGSI-----SRMPVQERS 381
            M+SGKRKRED P QY+ GG+IPQQDGAGD   +  ++    G  SI     S M  + RS
Sbjct: 195  MNSGKRKREDFPAQYQAGGFIPQQDGAGDAAPEKFEIEVSGGSTSIASRAWSEMLTRVRS 254

Query: 380  SSGRIPQLDGPMPDPYDDELSTPNIYNYQGVTNEDYNIVNTPMPNEMQAATPAXXXXXXX 201
            S+ +IPQLDGP+PDPYD ELSTPNIYNYQG  NEDYN+ +TP P+++  +TPA       
Sbjct: 255  STPKIPQLDGPIPDPYD-ELSTPNIYNYQGTFNEDYNVASTPAPHDIPVSTPAPVVQNDV 313

Query: 200  XXXXXXXXXXXXXXXXXXXD--QGEDLNTTHLVLAQFDKVTRTKSRWKCTLKDGIMHVNN 27
                               D  QG++LNT HLVLAQFDKVTRTKS+WKCTLKDGIMH+NN
Sbjct: 314  GDDDDDEPPLNENDDDELDDVDQGDELNTAHLVLAQFDKVTRTKSKWKCTLKDGIMHINN 373

Query: 26   KDILFNKA 3
            KD+LFNKA
Sbjct: 374  KDVLFNKA 381


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