BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Perilla23_contig00013156
         (1331 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011087529.1| PREDICTED: putative RNA polymerase II subuni...   410   e-111
ref|XP_011087531.1| PREDICTED: putative RNA polymerase II subuni...   408   e-111
ref|XP_011087530.1| PREDICTED: putative RNA polymerase II subuni...   398   e-108
ref|XP_012859052.1| PREDICTED: putative RNA polymerase II subuni...   329   3e-87
ref|XP_009771016.1| PREDICTED: putative RNA polymerase II subuni...   294   1e-76
ref|XP_009771014.1| PREDICTED: putative RNA polymerase II subuni...   294   1e-76
emb|CAN62034.1| hypothetical protein VITISV_014731 [Vitis vinifera]   294   1e-76
ref|XP_002280625.1| PREDICTED: putative RNA polymerase II subuni...   293   3e-76
ref|XP_006358558.1| PREDICTED: putative RNA polymerase II subuni...   291   9e-76
ref|XP_004230345.1| PREDICTED: putative RNA polymerase II subuni...   290   2e-75
ref|XP_012072543.1| PREDICTED: putative RNA polymerase II subuni...   288   7e-75
ref|XP_009602823.1| PREDICTED: putative RNA polymerase II subuni...   288   1e-74
ref|XP_009602820.1| PREDICTED: putative RNA polymerase II subuni...   288   1e-74
ref|XP_011044667.1| PREDICTED: putative RNA polymerase II subuni...   286   2e-74
emb|CDP15205.1| unnamed protein product [Coffea canephora]            285   5e-74
ref|XP_011044665.1| PREDICTED: putative RNA polymerase II subuni...   285   8e-74
ref|XP_009629199.1| PREDICTED: putative RNA polymerase II subuni...   285   8e-74
ref|XP_009629198.1| PREDICTED: putative RNA polymerase II subuni...   285   8e-74
ref|XP_009629194.1| PREDICTED: putative RNA polymerase II subuni...   285   8e-74
ref|XP_009629188.1| PREDICTED: putative RNA polymerase II subuni...   285   8e-74

>ref|XP_011087529.1| PREDICTED: putative RNA polymerase II subunit B1 CTD phosphatase
            RPAP2 homolog isoform X1 [Sesamum indicum]
          Length = 699

 Score =  410 bits (1053), Expect = e-111
 Identities = 221/367 (60%), Positives = 269/367 (73%), Gaps = 17/367 (4%)
 Frame = -2

Query: 1051 LKMAKDEVLAVKDAVHKVQLCLLEGIEHERLLLAAGSLISRDDYSDVVTERTIAEMCGYP 872
            L+M KDEVL VKDAVHK+QL LLEGI +E  L AAGSLI R DY DVVTERTI  MCGYP
Sbjct: 43   LEMKKDEVLTVKDAVHKLQLSLLEGINNENQLSAAGSLICRSDYQDVVTERTIINMCGYP 102

Query: 871  LCRNSLPSERPRKGRYRISLKEHKVFDLQETYMYCSSKCLIDSRAFAANLQEERSSTLNP 692
            LC NSLPSERPRKGRYRISLKEHKV+DLQETY+YCSS CLI+SRAFAA+LQEERSS+LNP
Sbjct: 103  LCSNSLPSERPRKGRYRISLKEHKVYDLQETYLYCSSSCLINSRAFAASLQEERSSSLNP 162

Query: 691  AKLDQLVKLFEGVSSDSDVDMGKNGDLGLSELKIQEK--TEGGGVPMEEWIGPANAIDGY 518
            A L++++KLF+G+S DS VDMG NGDLGLSELKI+EK  TE G V +EEWIGP+NAIDGY
Sbjct: 163  ATLNEVLKLFDGLSLDSAVDMG-NGDLGLSELKIEEKTDTEAGEVSLEEWIGPSNAIDGY 221

Query: 517  VPRRDKNLKARQLNNDKNGGKQEKVGTKDRFGDPNVLDIMSHDMNFTSTIIFHDEYSVSK 338
            VPR ++NLK +Q +N K G +QE+V ++ +   P+V DI+S D+NFTSTII  DEYS+SK
Sbjct: 222  VPRNERNLKPKQSSNLKKGARQEQVESEYKHDPPDVADILSSDLNFTSTIITQDEYSISK 281

Query: 337  TVTPVKAREPKGKLTSKDLNCENKPMQ---------------KSGKYKNATGTDDKVNVS 203
            +V  VK +E KGK++  D+N +   M+               KS K+K+ T TDDK+++ 
Sbjct: 282  SVPLVKDKESKGKVSINDVNSQGNQMEKPDAPLPNVQETKSKKSDKHKHVTKTDDKLSIL 341

Query: 202  EDVAGTSQSHDTRAVKKGHEGKESAAGATGXXXXXXXXXXXKAACSVTWADEKTDFDGQN 23
            E  AG SQ+  T+       GKE A+GAT            KA  SVTWAD KTD DGQN
Sbjct: 342  EAAAGPSQNDLTKEENGHRLGKECASGATILKSSLKTSDSKKATRSVTWADAKTDGDGQN 401

Query: 22   LEDCKEL 2
            L + +E+
Sbjct: 402  LCEFREV 408


>ref|XP_011087531.1| PREDICTED: putative RNA polymerase II subunit B1 CTD phosphatase
            RPAP2 homolog isoform X3 [Sesamum indicum]
            gi|747080559|ref|XP_011087533.1| PREDICTED: putative RNA
            polymerase II subunit B1 CTD phosphatase RPAP2 homolog
            isoform X3 [Sesamum indicum]
          Length = 655

 Score =  408 bits (1048), Expect = e-111
 Identities = 220/365 (60%), Positives = 267/365 (73%), Gaps = 17/365 (4%)
 Frame = -2

Query: 1045 MAKDEVLAVKDAVHKVQLCLLEGIEHERLLLAAGSLISRDDYSDVVTERTIAEMCGYPLC 866
            M KDEVL VKDAVHK+QL LLEGI +E  L AAGSLI R DY DVVTERTI  MCGYPLC
Sbjct: 1    MKKDEVLTVKDAVHKLQLSLLEGINNENQLSAAGSLICRSDYQDVVTERTIINMCGYPLC 60

Query: 865  RNSLPSERPRKGRYRISLKEHKVFDLQETYMYCSSKCLIDSRAFAANLQEERSSTLNPAK 686
             NSLPSERPRKGRYRISLKEHKV+DLQETY+YCSS CLI+SRAFAA+LQEERSS+LNPA 
Sbjct: 61   SNSLPSERPRKGRYRISLKEHKVYDLQETYLYCSSSCLINSRAFAASLQEERSSSLNPAT 120

Query: 685  LDQLVKLFEGVSSDSDVDMGKNGDLGLSELKIQEK--TEGGGVPMEEWIGPANAIDGYVP 512
            L++++KLF+G+S DS VDMG NGDLGLSELKI+EK  TE G V +EEWIGP+NAIDGYVP
Sbjct: 121  LNEVLKLFDGLSLDSAVDMG-NGDLGLSELKIEEKTDTEAGEVSLEEWIGPSNAIDGYVP 179

Query: 511  RRDKNLKARQLNNDKNGGKQEKVGTKDRFGDPNVLDIMSHDMNFTSTIIFHDEYSVSKTV 332
            R ++NLK +Q +N K G +QE+V ++ +   P+V DI+S D+NFTSTII  DEYS+SK+V
Sbjct: 180  RNERNLKPKQSSNLKKGARQEQVESEYKHDPPDVADILSSDLNFTSTIITQDEYSISKSV 239

Query: 331  TPVKAREPKGKLTSKDLNCENKPMQ---------------KSGKYKNATGTDDKVNVSED 197
              VK +E KGK++  D+N +   M+               KS K+K+ T TDDK+++ E 
Sbjct: 240  PLVKDKESKGKVSINDVNSQGNQMEKPDAPLPNVQETKSKKSDKHKHVTKTDDKLSILEA 299

Query: 196  VAGTSQSHDTRAVKKGHEGKESAAGATGXXXXXXXXXXXKAACSVTWADEKTDFDGQNLE 17
             AG SQ+  T+       GKE A+GAT            KA  SVTWAD KTD DGQNL 
Sbjct: 300  AAGPSQNDLTKEENGHRLGKECASGATILKSSLKTSDSKKATRSVTWADAKTDGDGQNLC 359

Query: 16   DCKEL 2
            + +E+
Sbjct: 360  EFREV 364


>ref|XP_011087530.1| PREDICTED: putative RNA polymerase II subunit B1 CTD phosphatase
            RPAP2 homolog isoform X2 [Sesamum indicum]
          Length = 687

 Score =  398 bits (1023), Expect = e-108
 Identities = 219/367 (59%), Positives = 263/367 (71%), Gaps = 17/367 (4%)
 Frame = -2

Query: 1051 LKMAKDEVLAVKDAVHKVQLCLLEGIEHERLLLAAGSLISRDDYSDVVTERTIAEMCGYP 872
            L+M KDEVL VKDAVHK+QL LLEGI +E  L AAGSLI R DY DVVTERTI  MCGYP
Sbjct: 43   LEMKKDEVLTVKDAVHKLQLSLLEGINNENQLSAAGSLICRSDYQDVVTERTIINMCGYP 102

Query: 871  LCRNSLPSERPRKGRYRISLKEHKVFDLQETYMYCSSKCLIDSRAFAANLQEERSSTLNP 692
            LC NSLPSERPRKGRYRISLKEHKV+DLQETY+YCSS CLI+SRAFAA+LQEERSS+LNP
Sbjct: 103  LCSNSLPSERPRKGRYRISLKEHKVYDLQETYLYCSSSCLINSRAFAASLQEERSSSLNP 162

Query: 691  AKLDQLVKLFEGVSSDSDVDMGKNGDLGLSELKIQEK--TEGGGVPMEEWIGPANAIDGY 518
            A L++++KLF+G+S DS VDMG NGDLGLSELKI+EK  TE G V +EEWIGP+NAIDGY
Sbjct: 163  ATLNEVLKLFDGLSLDSAVDMG-NGDLGLSELKIEEKTDTEAGEVSLEEWIGPSNAIDGY 221

Query: 517  VPRRDKNLKARQLNNDKNGGKQEKVGTKDRFGDPNVLDIMSHDMNFTSTIIFHDEYSVSK 338
            VPR ++NLK +Q +N K G +QE+V            DI+S D+NFTSTII  DEYS+SK
Sbjct: 222  VPRNERNLKPKQSSNLKKGARQEQV------------DILSSDLNFTSTIITQDEYSISK 269

Query: 337  TVTPVKAREPKGKLTSKDLNCENKPMQ---------------KSGKYKNATGTDDKVNVS 203
            +V  VK +E KGK++  D+N +   M+               KS K+K+ T TDDK+++ 
Sbjct: 270  SVPLVKDKESKGKVSINDVNSQGNQMEKPDAPLPNVQETKSKKSDKHKHVTKTDDKLSIL 329

Query: 202  EDVAGTSQSHDTRAVKKGHEGKESAAGATGXXXXXXXXXXXKAACSVTWADEKTDFDGQN 23
            E  AG SQ+  T+       GKE A+GAT            KA  SVTWAD KTD DGQN
Sbjct: 330  EAAAGPSQNDLTKEENGHRLGKECASGATILKSSLKTSDSKKATRSVTWADAKTDGDGQN 389

Query: 22   LEDCKEL 2
            L + +E+
Sbjct: 390  LCEFREV 396


>ref|XP_012859052.1| PREDICTED: putative RNA polymerase II subunit B1 CTD phosphatase
            RPAP2 homolog [Erythranthe guttatus]
            gi|604299511|gb|EYU19406.1| hypothetical protein
            MIMGU_mgv1a003240mg [Erythranthe guttata]
          Length = 597

 Score =  329 bits (844), Expect = 3e-87
 Identities = 182/350 (52%), Positives = 239/350 (68%), Gaps = 2/350 (0%)
 Frame = -2

Query: 1045 MAKDEVLAVKDAVHKVQLCLLEGIEHERLLLAAGSLISRDDYSDVVTERTIAEMCGYPLC 866
            M   ++L VKDAVHK+QL LLEGI+HE  L+AAGSLIS+ DY DVVTERTIA +CGYPLC
Sbjct: 1    MKDGKILGVKDAVHKLQLSLLEGIKHESQLIAAGSLISQSDYQDVVTERTIAHVCGYPLC 60

Query: 865  RNSLPSERPRKGRYRISLKEHKVFDLQETYMYCSSKCLIDSRAFAANLQEERSSTLNPAK 686
             NSLPSE PRKG YRISLKEHKV+DL ET+MYCS++CLI SRAF A+L+EERSS+L+PAK
Sbjct: 61   VNSLPSEPPRKGHYRISLKEHKVYDLHETHMYCSTECLIRSRAFGASLEEERSSSLDPAK 120

Query: 685  LDQLVKLFEGVSSDSDVDMGKNGDLGLSELKIQEK--TEGGGVPMEEWIGPANAIDGYVP 512
            ++ ++K+F+G+S DS + + K+GDLGLS LKI+EK  T  G + +EEW+GP+NAIDGYVP
Sbjct: 121  INSVLKMFDGLSLDSVMGLDKSGDLGLSGLKIREKMVTGSGEMSLEEWVGPSNAIDGYVP 180

Query: 511  RRDKNLKARQLNNDKNGGKQEKVGTKDRFGDPNVLDIMSHDMNFTSTIIFHDEYSVSKTV 332
            RRD+N + +Q +  K         T+     PN+ D +  D+NFTSTII  DEYSVSKT 
Sbjct: 181  RRDQNSERKQPSRKK---------TESNHAKPNLADTLPFDVNFTSTIIMQDEYSVSKTA 231

Query: 331  TPVKAREPKGKLTSKDLNCENKPMQKSGKYKNATGTDDKVNVSEDVAGTSQSHDTRAVKK 152
             P   RE KGK+       + K ++KS K        +K++V +D AG SQ +DT  +K 
Sbjct: 232  VP---REAKGKV-------KGKMIRKSVK-------AEKISVLDDTAGPSQ-NDTTLLKS 273

Query: 151  GHEGKESAAGATGXXXXXXXXXXXKAACSVTWADEKTDFDGQNLEDCKEL 2
              +  +S                     SVTWADEK+D DG+++ +C+E+
Sbjct: 274  SLKTLDSKKETR----------------SVTWADEKSDGDGKSISECREI 307


>ref|XP_009771016.1| PREDICTED: putative RNA polymerase II subunit B1 CTD phosphatase
            RPAP2 homolog isoform X2 [Nicotiana sylvestris]
          Length = 576

 Score =  294 bits (753), Expect = 1e-76
 Identities = 175/367 (47%), Positives = 228/367 (62%), Gaps = 31/367 (8%)
 Frame = -2

Query: 1045 MAKDEVLAVKDAVHKVQLCLLEGIEHERLLLAAGSLISRDDYSDVVTERTIAEMCGYPLC 866
            MA +EV+AVKDA+HK+QL LLEGI+ E  L AAGSL+SR DY DVVTER+IA MCGYPLC
Sbjct: 1    MANEEVIAVKDAIHKLQLYLLEGIKDENQLFAAGSLLSRRDYQDVVTERSIANMCGYPLC 60

Query: 865  RNSLPSERPRKGRYRISLKEHKVFDLQETYMYCSSKCLIDSRAFAANLQEERSSTLNPAK 686
             NSLPSERPR G YRISLKEHKV+DL ETYMYCS+ C ++S AFA +LQ+ERSSTLN AK
Sbjct: 61   SNSLPSERPRNGHYRISLKEHKVYDLHETYMYCSTNCAVNSGAFARSLQDERSSTLNTAK 120

Query: 685  LDQLVKLFEGVSSDSDVDMGKNGDLGLSELKIQEKTE--GGGVPMEEWIGPANAIDGYVP 512
            L++++KLF G+   S  D+ ++GDLGLS+LKIQEK +  GG V MEEW+GP++AI+GYVP
Sbjct: 121  LNEVLKLFVGLHLHSTEDVKESGDLGLSKLKIQEKVDVKGGEVSMEEWMGPSDAIEGYVP 180

Query: 511  RRDKNLKARQLNNDKNGGKQEKVGTKDRFGDPNVLDIMSHDMNFTSTIIFHDEYSVSKTV 332
            +R++NLK   LNN K   K ++   +      N  +++ H+M+F+STII  D YS+SK  
Sbjct: 181  QRERNLKPALLNNIKKSSKNKQAKLQ------NEKNMILHEMDFSSTIITQDGYSISKLP 234

Query: 331  TPVKAREPKG----------KLTSKDLNCENKPMQK----SGKYKNATGTD------DKV 212
             PV A   K           ++   D++   K +      SG+    T ++      DK 
Sbjct: 235  APVNAVSSKKVKEAQTRTSYEVRDVDVSILGKQVDALQLHSGEETEKTDSNNRSYKVDKF 294

Query: 211  NVSEDVAGTSQSHDTR-----AVKKGHEGKESAAGAT----GXXXXXXXXXXXKAACSVT 59
            N  E  +G  Q HD +      +     G+E A+                   K A SVT
Sbjct: 295  NTGEVSSGPCQ-HDVKNKSLEVLNMSDAGREYASDDAREKQSLRSSLKSSKYKKMARSVT 353

Query: 58   WADEKTD 38
            WADE  D
Sbjct: 354  WADENVD 360


>ref|XP_009771014.1| PREDICTED: putative RNA polymerase II subunit B1 CTD phosphatase
            RPAP2 homolog isoform X1 [Nicotiana sylvestris]
            gi|698557405|ref|XP_009771015.1| PREDICTED: putative RNA
            polymerase II subunit B1 CTD phosphatase RPAP2 homolog
            isoform X1 [Nicotiana sylvestris]
          Length = 664

 Score =  294 bits (753), Expect = 1e-76
 Identities = 175/367 (47%), Positives = 228/367 (62%), Gaps = 31/367 (8%)
 Frame = -2

Query: 1045 MAKDEVLAVKDAVHKVQLCLLEGIEHERLLLAAGSLISRDDYSDVVTERTIAEMCGYPLC 866
            MA +EV+AVKDA+HK+QL LLEGI+ E  L AAGSL+SR DY DVVTER+IA MCGYPLC
Sbjct: 1    MANEEVIAVKDAIHKLQLYLLEGIKDENQLFAAGSLLSRRDYQDVVTERSIANMCGYPLC 60

Query: 865  RNSLPSERPRKGRYRISLKEHKVFDLQETYMYCSSKCLIDSRAFAANLQEERSSTLNPAK 686
             NSLPSERPR G YRISLKEHKV+DL ETYMYCS+ C ++S AFA +LQ+ERSSTLN AK
Sbjct: 61   SNSLPSERPRNGHYRISLKEHKVYDLHETYMYCSTNCAVNSGAFARSLQDERSSTLNTAK 120

Query: 685  LDQLVKLFEGVSSDSDVDMGKNGDLGLSELKIQEKTE--GGGVPMEEWIGPANAIDGYVP 512
            L++++KLF G+   S  D+ ++GDLGLS+LKIQEK +  GG V MEEW+GP++AI+GYVP
Sbjct: 121  LNEVLKLFVGLHLHSTEDVKESGDLGLSKLKIQEKVDVKGGEVSMEEWMGPSDAIEGYVP 180

Query: 511  RRDKNLKARQLNNDKNGGKQEKVGTKDRFGDPNVLDIMSHDMNFTSTIIFHDEYSVSKTV 332
            +R++NLK   LNN K   K ++   +      N  +++ H+M+F+STII  D YS+SK  
Sbjct: 181  QRERNLKPALLNNIKKSSKNKQAKLQ------NEKNMILHEMDFSSTIITQDGYSISKLP 234

Query: 331  TPVKAREPKG----------KLTSKDLNCENKPMQK----SGKYKNATGTD------DKV 212
             PV A   K           ++   D++   K +      SG+    T ++      DK 
Sbjct: 235  APVNAVSSKKVKEAQTRTSYEVRDVDVSILGKQVDALQLHSGEETEKTDSNNRSYKVDKF 294

Query: 211  NVSEDVAGTSQSHDTR-----AVKKGHEGKESAAGAT----GXXXXXXXXXXXKAACSVT 59
            N  E  +G  Q HD +      +     G+E A+                   K A SVT
Sbjct: 295  NTGEVSSGPCQ-HDVKNKSLEVLNMSDAGREYASDDAREKQSLRSSLKSSKYKKMARSVT 353

Query: 58   WADEKTD 38
            WADE  D
Sbjct: 354  WADENVD 360


>emb|CAN62034.1| hypothetical protein VITISV_014731 [Vitis vinifera]
          Length = 659

 Score =  294 bits (753), Expect = 1e-76
 Identities = 180/361 (49%), Positives = 228/361 (63%), Gaps = 25/361 (6%)
 Frame = -2

Query: 1045 MAKDEVLAVKDAVHKVQLCLLEGIEHERLLLAAGSLISRDDYSDVVTERTIAEMCGYPLC 866
            MA D+ +AVKDAVHK+QL LLEGI++E  L AAGSL+SR DY DVVTERTIA +CGYPLC
Sbjct: 1    MAGDQPIAVKDAVHKLQLFLLEGIQNENQLFAAGSLMSRSDYEDVVTERTIANLCGYPLC 60

Query: 865  RNSLPSERPRKGRYRISLKEHKVFDLQETYMYCSSKCLIDSRAFAANLQEERSSTLNPAK 686
             NSLPSER RKG YRISLKEHKV+DL ETYMYCSS C+++SR+FA +LQEER S LN  +
Sbjct: 61   SNSLPSERLRKGHYRISLKEHKVYDLHETYMYCSSGCVVNSRSFAGSLQEERCSVLNSER 120

Query: 685  LDQLVKLFEGVSSDSDVDMGKNGDLGLSELKIQEKTE--GGGVPMEEWIGPANAIDGYVP 512
            ++ +++LF   S +S+  +GK+GDLGLSELKI+E  E   G V ME+WIGP+NAI+GYVP
Sbjct: 121  INGILRLFGESSLESNKILGKHGDLGLSELKIRENVEKKAGEVSMEDWIGPSNAIEGYVP 180

Query: 511  RRDKNLKARQLNNDKNGGKQEKVGTKDRFGDPNVLDIMSHDMNFTSTIIFHDEYSVSK-- 338
            +RD+NLK + + N K G K     +K   G   V+D    +M+F STII  DEYS+SK  
Sbjct: 181  QRDRNLKPKNIKNHKEGSKSS--NSKMDSGKNFVID----EMDFVSTIITKDEYSISKSS 234

Query: 337  -----TVTPVKAREPKGKLTSKD----LNCENKPMQ--KSGKYKNATGT------DDKVN 209
                 T +  K++EPK K +  D    L     P+Q     K + + G        D+ +
Sbjct: 235  KGLKDTTSHAKSKEPKEKASIGDQLSMLEKSAPPIQNDSESKLRESKGRRSRVIFKDEFS 294

Query: 208  VSEDVAGTSQSHDTRAVKKGHE--GKESAA--GATGXXXXXXXXXXXKAACSVTWADEKT 41
             +E  +  SQS       KG E    E+AA  G T            K   SVTWADEK 
Sbjct: 295  TAEVPSVPSQSGSELNGVKGKEEYHTENAAQLGPTKPKSSLKPSGGKKVIRSVTWADEKM 354

Query: 40   D 38
            D
Sbjct: 355  D 355


>ref|XP_002280625.1| PREDICTED: putative RNA polymerase II subunit B1 CTD phosphatase
            RPAP2 homolog [Vitis vinifera]
            gi|731415977|ref|XP_010659731.1| PREDICTED: putative RNA
            polymerase II subunit B1 CTD phosphatase RPAP2 homolog
            [Vitis vinifera] gi|731415979|ref|XP_010659732.1|
            PREDICTED: putative RNA polymerase II subunit B1 CTD
            phosphatase RPAP2 homolog [Vitis vinifera]
            gi|296089830|emb|CBI39649.3| unnamed protein product
            [Vitis vinifera]
          Length = 659

 Score =  293 bits (749), Expect = 3e-76
 Identities = 179/361 (49%), Positives = 227/361 (62%), Gaps = 25/361 (6%)
 Frame = -2

Query: 1045 MAKDEVLAVKDAVHKVQLCLLEGIEHERLLLAAGSLISRDDYSDVVTERTIAEMCGYPLC 866
            MA D+ +AVKDAVHK+QL LLEGI++E  L AAGSL+SR DY DVVTERTIA +CGYPLC
Sbjct: 1    MAGDQPIAVKDAVHKLQLFLLEGIQNENQLFAAGSLMSRSDYEDVVTERTIANLCGYPLC 60

Query: 865  RNSLPSERPRKGRYRISLKEHKVFDLQETYMYCSSKCLIDSRAFAANLQEERSSTLNPAK 686
             NSLPSER RKG YRISLKEHKV+DL ETYMYCSS C+++SR+FA +LQEER S LN  +
Sbjct: 61   SNSLPSERLRKGHYRISLKEHKVYDLHETYMYCSSGCVVNSRSFAGSLQEERCSVLNSER 120

Query: 685  LDQLVKLFEGVSSDSDVDMGKNGDLGLSELKIQEKTE--GGGVPMEEWIGPANAIDGYVP 512
            ++ +++LF   S +S+  +GK+GDLGLSELKI+E  E   G V ME+WIGP+NAI+GYVP
Sbjct: 121  INGILRLFGESSLESNKILGKHGDLGLSELKIRENVEKKAGEVSMEDWIGPSNAIEGYVP 180

Query: 511  RRDKNLKARQLNNDKNGGKQEKVGTKDRFGDPNVLDIMSHDMNFTSTIIFHDEYSVSK-- 338
            +RD+NLK + + N K G K     +K   G   V+D    +M+F  TII  DEYS+SK  
Sbjct: 181  QRDRNLKPKNIKNRKEGSKSS--NSKMDSGKNFVID----EMDFVRTIITEDEYSISKSS 234

Query: 337  -----TVTPVKAREPKGKLTSKD----LNCENKPMQ--KSGKYKNATGT------DDKVN 209
                 T +  K++EPK K +  D    L     P+Q     K + + G        D+ +
Sbjct: 235  KGLKDTTSHAKSKEPKEKASIGDQLSMLEKSAPPIQNDSESKLRESKGRRSRVIFKDEFS 294

Query: 208  VSEDVAGTSQSHDTRAVKKGHE--GKESAA--GATGXXXXXXXXXXXKAACSVTWADEKT 41
             +E  +  SQS       KG E    E+AA  G T            K   SVTWADEK 
Sbjct: 295  TAEVPSVPSQSGSELNGVKGKEEYHTENAAQLGPTKLKSCLKPSGGKKVTRSVTWADEKM 354

Query: 40   D 38
            D
Sbjct: 355  D 355


>ref|XP_006358558.1| PREDICTED: putative RNA polymerase II subunit B1 CTD phosphatase
            RPAP2 homolog isoform X1 [Solanum tuberosum]
          Length = 662

 Score =  291 bits (745), Expect = 9e-76
 Identities = 173/366 (47%), Positives = 230/366 (62%), Gaps = 30/366 (8%)
 Frame = -2

Query: 1045 MAKDEVLAVKDAVHKVQLCLLEGIEHERLLLAAGSLISRDDYSDVVTERTIAEMCGYPLC 866
            MAK E +AVKDAVHK+QLCLLEGI+ E  L+AAGSL+SR DY DVVTER+IA MCGYPLC
Sbjct: 1    MAKGEAVAVKDAVHKLQLCLLEGIKDENQLIAAGSLLSRSDYQDVVTERSIANMCGYPLC 60

Query: 865  RNSLPSERPRKGRYRISLKEHKVFDLQETYMYCSSKCLIDSRAFAANLQEERSSTLNPAK 686
             NSLPSER RKG YRISLKEHKV+DL ETYMYCS+ C+++S AFA +LQ+ERSSTLNPAK
Sbjct: 61   SNSLPSERSRKGHYRISLKEHKVYDLHETYMYCSTNCVVNSGAFAGSLQDERSSTLNPAK 120

Query: 685  LDQLVKLFEGVSSDSDVDMGKNGDLGLSELKIQEKTE---GGGVPMEEWIGPANAIDGYV 515
            L+Q++ LF+G+   S  D+ +NGDLG S+LKIQEK +   GG V +EEW+GP+NAI+GYV
Sbjct: 121  LNQVLNLFKGLHLHSPEDVKENGDLGSSKLKIQEKVDVKGGGEVSLEEWMGPSNAIEGYV 180

Query: 514  PRRDKNLKARQLNNDKNGGKQEKVGTKDRFGDPNVLDIMSHDMNFTSTIIFHDEYSVSKT 335
            P+RD+++    L N   G K +    +D        +++ ++ +F+STII  DEYSVSK 
Sbjct: 181  PQRDRSVNPALLKNINKGFKNKHARLQDE------KNMILNEFDFSSTIITQDEYSVSKF 234

Query: 334  VTPVKA----------REPKGKLTSKDLNCENKPMQ----KSGKYKNATGTD------DK 215
              PV A           + + K+   D++   K +     +SG+    +  +      DK
Sbjct: 235  PAPVNAVSSEKFKEAQAKTRYKVRDDDVSILGKRVDALQLRSGEETEKSDKNTRFLKVDK 294

Query: 214  VNVSEDVAGTSQSHDTR---AVKKGHEGKESAAGATG----XXXXXXXXXXXKAACSVTW 56
             N  E  +G SQ HD +    +    +G++ A+                   K + SVTW
Sbjct: 295  FNSGEVSSGPSQ-HDVKNKSVLIMSDDGRKYASHGEHDKQLLKSSLKSSNSKKMSQSVTW 353

Query: 55   ADEKTD 38
            ADE  D
Sbjct: 354  ADEIID 359


>ref|XP_004230345.1| PREDICTED: putative RNA polymerase II subunit B1 CTD phosphatase
            RPAP2 homolog [Solanum lycopersicum]
          Length = 660

 Score =  290 bits (742), Expect = 2e-75
 Identities = 153/271 (56%), Positives = 194/271 (71%), Gaps = 2/271 (0%)
 Frame = -2

Query: 1045 MAKDEVLAVKDAVHKVQLCLLEGIEHERLLLAAGSLISRDDYSDVVTERTIAEMCGYPLC 866
            MAK E +AVKDAVHK+QLCLLEGI+ E  L+AAGSL+SR DY DVVTER+IA MCGYPLC
Sbjct: 1    MAKGEAVAVKDAVHKLQLCLLEGIKDESQLIAAGSLLSRSDYQDVVTERSIANMCGYPLC 60

Query: 865  RNSLPSERPRKGRYRISLKEHKVFDLQETYMYCSSKCLIDSRAFAANLQEERSSTLNPAK 686
             NSLPSER RKG YRISLKEHKV+DL ETYMYCS+ C+++S AFA +LQ+ERSSTLNPAK
Sbjct: 61   SNSLPSERSRKGHYRISLKEHKVYDLHETYMYCSTNCVVNSGAFAGSLQDERSSTLNPAK 120

Query: 685  LDQLVKLFEGVSSDSDVDMGKNGDLGLSELKIQEKTE--GGGVPMEEWIGPANAIDGYVP 512
            L+Q++ LF+G+   S  D+ +NGD G S+LKIQEK +  GG V +EEW+GP+NAI+GYVP
Sbjct: 121  LNQVLNLFKGLHLHSLDDVKENGDRGSSKLKIQEKVDLKGGEVSLEEWMGPSNAIEGYVP 180

Query: 511  RRDKNLKARQLNNDKNGGKQEKVGTKDRFGDPNVLDIMSHDMNFTSTIIFHDEYSVSKTV 332
            +RD+++    L N   G K +    +D        +++ ++ +F+STII  DEYSVSK  
Sbjct: 181  QRDRSVNPALLKNINKGSKNKHARLQDE------KNMILNEFDFSSTIITQDEYSVSKFP 234

Query: 331  TPVKAREPKGKLTSKDLNCENKPMQKSGKYK 239
             PV A          D N + K  Q   +YK
Sbjct: 235  APVNA----------DSNVKFKETQAKTRYK 255


>ref|XP_012072543.1| PREDICTED: putative RNA polymerase II subunit B1 CTD phosphatase
            RPAP2 homolog [Jatropha curcas]
            gi|802599693|ref|XP_012072544.1| PREDICTED: putative RNA
            polymerase II subunit B1 CTD phosphatase RPAP2 homolog
            [Jatropha curcas] gi|802599695|ref|XP_012072546.1|
            PREDICTED: putative RNA polymerase II subunit B1 CTD
            phosphatase RPAP2 homolog [Jatropha curcas]
            gi|643730423|gb|KDP37902.1| hypothetical protein
            JCGZ_05341 [Jatropha curcas]
          Length = 654

 Score =  288 bits (737), Expect = 7e-75
 Identities = 173/373 (46%), Positives = 225/373 (60%), Gaps = 25/373 (6%)
 Frame = -2

Query: 1045 MAKDEVLAVKDAVHKVQLCLLEGIEHERLLLAAGSLISRDDYSDVVTERTIAEMCGYPLC 866
            MAKD+ ++VKD VHK+QL LLEGI++E  L  AGSL+SR DY DVVTER+IA +CGYPLC
Sbjct: 1    MAKDQSISVKDTVHKLQLSLLEGIKNEDQLFTAGSLMSRSDYEDVVTERSIANLCGYPLC 60

Query: 865  RNSLPSERPRKGRYRISLKEHKVFDLQETYMYCSSKCLIDSRAFAANLQEERSSTLNPAK 686
             NSLP +RP KGRYRISLKEHKV+DL ETYMYCSS C+++SRAFA +LQEER S LNP K
Sbjct: 61   NNSLPLDRPYKGRYRISLKEHKVYDLHETYMYCSSSCIVNSRAFAGSLQEERCSVLNPMK 120

Query: 685  LDQLVKLFEGVSSDSDVDMGKNGDLGLSELKIQEKTEG--GGVPMEEWIGPANAIDGYVP 512
            LD+++++F  +S DS  ++ +NGDLGLS LKIQEK E   G V +EEWIGP+NAI+GYVP
Sbjct: 121  LDEILRMFNNLSLDSK-NLVENGDLGLSNLKIQEKIESNVGEVSLEEWIGPSNAIEGYVP 179

Query: 511  RRDKNLKARQLNNDKNGGKQEKVGTKDRFGDPNVLDIMSHDMNFTSTIIFHDEYSVSK-- 338
            +RD++ K     N K   K   + TK      N  +   +DM+F STII  DEYS+SK  
Sbjct: 180  QRDRDFKGSSFKNPKEASK--AISTK----PVNKQECFFNDMDFMSTIITKDEYSISKAP 233

Query: 337  -----TVTPVKAREPKGKLTSKDLNCENKPMQKSGKYK---NATGTDDKVNVSE-----D 197
                 T + +K +E +GK T K    ++    K    K    + G   K  + E     D
Sbjct: 234  SGSISTGSDMKLQEQRGKETHKGSEAQSSSPGKHAFVKTSRKSKGGRSKQIIKEELSDKD 293

Query: 196  VAGTSQSHDTRAVKKGHEGKESAAGATG-------XXXXXXXXXXXKAACSVTWADEKTD 38
            +   S    T +     E +E +                       K+  SVTWADEK D
Sbjct: 294  LLSASNYSQTGSSMNNAEPEEKSGAKQAANLSESMLKPSLKPSGAKKSVHSVTWADEKFD 353

Query: 37   -FDGQNLEDCKEL 2
                +NL + +E+
Sbjct: 354  NAKSRNLCEVREM 366


>ref|XP_009602823.1| PREDICTED: putative RNA polymerase II subunit B1 CTD phosphatase
            RPAP2 homolog isoform X2 [Nicotiana tomentosiformis]
          Length = 576

 Score =  288 bits (736), Expect = 1e-74
 Identities = 172/367 (46%), Positives = 228/367 (62%), Gaps = 31/367 (8%)
 Frame = -2

Query: 1045 MAKDEVLAVKDAVHKVQLCLLEGIEHERLLLAAGSLISRDDYSDVVTERTIAEMCGYPLC 866
            MA +EV+AVKDA+HK+QLCLLEGI+ E  L AAGSL+SR DY DVVTERTIA MCGYPLC
Sbjct: 1    MANEEVIAVKDAIHKLQLCLLEGIKDENQLFAAGSLLSRRDYQDVVTERTIANMCGYPLC 60

Query: 865  RNSLPSERPRKGRYRISLKEHKVFDLQETYMYCSSKCLIDSRAFAANLQEERSSTLNPAK 686
             N LPSERP+KG YRISLKEHKV+DL E YMYCS+ C+++S AFA +LQ+ERS TLN AK
Sbjct: 61   SNCLPSERPKKGHYRISLKEHKVYDLHEAYMYCSTNCVVNSGAFARSLQDERSDTLNTAK 120

Query: 685  LDQLVKLFEGVSSDSDVDMGKNGDLGLSELKIQEK--TEGGGVPMEEWIGPANAIDGYVP 512
            L++++KLF G+   S  D+  NG+LGLS+LKIQEK   +GG V M+EW+GP++AI+GY P
Sbjct: 121  LNEVLKLFVGLHLHSTEDVKDNGELGLSKLKIQEKLDVKGGEVSMDEWMGPSDAIEGYFP 180

Query: 511  RRDKNLKARQLNNDKNGGKQEKVGTKDRFGDPNVLDIMSHDMNFTSTIIFHDEYSVSKTV 332
            +RD+++K   LNN K G K ++   +      N  +++ ++M+F+STII  D YS+SK  
Sbjct: 181  QRDQSVKPALLNNIKKGFKNKQTKLQ------NKKNMILNEMDFSSTIITQDGYSISKLP 234

Query: 331  TPV------KAREPKGKLT----SKDLNCENKPMQ----KSGKYKNATGTD------DKV 212
             P+      K  E + K +      D++   K +      SG+    T ++      DK 
Sbjct: 235  APINVVSSKKVNEAQTKTSYEVGDADVSILGKQVDVLQLYSGEETEKTDSNDRSYKVDKF 294

Query: 211  NVSEDVAGTSQSHDTR-----AVKKGHEGKESAAGAT----GXXXXXXXXXXXKAACSVT 59
            N  E  +G  Q HD R      +     G+E A+                   K A SVT
Sbjct: 295  NNREVSSGPCQ-HDVRNKSLEVLNMSDAGREYASDGAREKQSLRSSLKSSNYKKMARSVT 353

Query: 58   WADEKTD 38
            WADE  D
Sbjct: 354  WADENID 360


>ref|XP_009602820.1| PREDICTED: putative RNA polymerase II subunit B1 CTD phosphatase
            RPAP2 homolog isoform X1 [Nicotiana tomentosiformis]
            gi|697187566|ref|XP_009602821.1| PREDICTED: putative RNA
            polymerase II subunit B1 CTD phosphatase RPAP2 homolog
            isoform X1 [Nicotiana tomentosiformis]
          Length = 664

 Score =  288 bits (736), Expect = 1e-74
 Identities = 172/367 (46%), Positives = 228/367 (62%), Gaps = 31/367 (8%)
 Frame = -2

Query: 1045 MAKDEVLAVKDAVHKVQLCLLEGIEHERLLLAAGSLISRDDYSDVVTERTIAEMCGYPLC 866
            MA +EV+AVKDA+HK+QLCLLEGI+ E  L AAGSL+SR DY DVVTERTIA MCGYPLC
Sbjct: 1    MANEEVIAVKDAIHKLQLCLLEGIKDENQLFAAGSLLSRRDYQDVVTERTIANMCGYPLC 60

Query: 865  RNSLPSERPRKGRYRISLKEHKVFDLQETYMYCSSKCLIDSRAFAANLQEERSSTLNPAK 686
             N LPSERP+KG YRISLKEHKV+DL E YMYCS+ C+++S AFA +LQ+ERS TLN AK
Sbjct: 61   SNCLPSERPKKGHYRISLKEHKVYDLHEAYMYCSTNCVVNSGAFARSLQDERSDTLNTAK 120

Query: 685  LDQLVKLFEGVSSDSDVDMGKNGDLGLSELKIQEK--TEGGGVPMEEWIGPANAIDGYVP 512
            L++++KLF G+   S  D+  NG+LGLS+LKIQEK   +GG V M+EW+GP++AI+GY P
Sbjct: 121  LNEVLKLFVGLHLHSTEDVKDNGELGLSKLKIQEKLDVKGGEVSMDEWMGPSDAIEGYFP 180

Query: 511  RRDKNLKARQLNNDKNGGKQEKVGTKDRFGDPNVLDIMSHDMNFTSTIIFHDEYSVSKTV 332
            +RD+++K   LNN K G K ++   +      N  +++ ++M+F+STII  D YS+SK  
Sbjct: 181  QRDQSVKPALLNNIKKGFKNKQTKLQ------NKKNMILNEMDFSSTIITQDGYSISKLP 234

Query: 331  TPV------KAREPKGKLT----SKDLNCENKPMQ----KSGKYKNATGTD------DKV 212
             P+      K  E + K +      D++   K +      SG+    T ++      DK 
Sbjct: 235  APINVVSSKKVNEAQTKTSYEVGDADVSILGKQVDVLQLYSGEETEKTDSNDRSYKVDKF 294

Query: 211  NVSEDVAGTSQSHDTR-----AVKKGHEGKESAAGAT----GXXXXXXXXXXXKAACSVT 59
            N  E  +G  Q HD R      +     G+E A+                   K A SVT
Sbjct: 295  NNREVSSGPCQ-HDVRNKSLEVLNMSDAGREYASDGAREKQSLRSSLKSSNYKKMARSVT 353

Query: 58   WADEKTD 38
            WADE  D
Sbjct: 354  WADENID 360


>ref|XP_011044667.1| PREDICTED: putative RNA polymerase II subunit B1 CTD phosphatase
            RPAP2 homolog isoform X2 [Populus euphratica]
          Length = 722

 Score =  286 bits (733), Expect = 2e-74
 Identities = 150/281 (53%), Positives = 198/281 (70%), Gaps = 4/281 (1%)
 Frame = -2

Query: 1045 MAKDEVLAVKDAVHKVQLCLLEGIEHERLLLAAGSLISRDDYSDVVTERTIAEMCGYPLC 866
            MAKD++  VKD ++K+QL LLEGI++E  L AAGS++SR DY DVVTERTIA +CGYPLC
Sbjct: 1    MAKDQLTVVKDTIYKLQLSLLEGIQNEDQLFAAGSIMSRSDYEDVVTERTIANLCGYPLC 60

Query: 865  RNSLPSERPRKGRYRISLKEHKVFDLQETYMYCSSKCLIDSRAFAANLQEERSSTLNPAK 686
             NSLPS+RP+KGRYRISLKEHKV+DL ETYMYCSS C+++SR F+ +LQEER   LNPAK
Sbjct: 61   GNSLPSDRPQKGRYRISLKEHKVYDLNETYMYCSSSCVVNSRTFSGSLQEERCLVLNPAK 120

Query: 685  LDQLVKLFEGVSSDSDVDMGKNGDLGLSELKIQEKTE--GGGVPMEEWIGPANAIDGYVP 512
            L++++ LF+  +  S+  +GKNGDLG S LKI+EKTE   G V  E+WIGP+NAI+GYVP
Sbjct: 121  LNEVLMLFDNFNLGSEGGLGKNGDLGFSNLKIEEKTEKVEGEVSFEQWIGPSNAIEGYVP 180

Query: 511  RRDKNLKARQLNNDKNG--GKQEKVGTKDRFGDPNVLDIMSHDMNFTSTIIFHDEYSVSK 338
            +RD+N K+  L N K G      K  +K+        D +  DM+FTS+II  DEYS+SK
Sbjct: 181  QRDRNSKSLPLKNHKEGLEANTAKQSSKE--------DFIIDDMDFTSSIITQDEYSISK 232

Query: 337  TVTPVKAREPKGKLTSKDLNCENKPMQKSGKYKNATGTDDK 215
            T        P G LT  + + + +  +  G +K + G++ K
Sbjct: 233  T--------PSG-LTDTNTDKKTQKPKAKGSHKGSKGSETK 264


>emb|CDP15205.1| unnamed protein product [Coffea canephora]
          Length = 762

 Score =  285 bits (730), Expect = 5e-74
 Identities = 150/291 (51%), Positives = 203/291 (69%), Gaps = 9/291 (3%)
 Frame = -2

Query: 1045 MAKDEVLAVKDAVHKVQLCLLEGIEHERLLLAAGSLISRDDYSDVVTERTIAEMCGYPLC 866
            MAKD V+A+KDAVH++QL LLEGI+ E  L AAGS++S+ DY DVVTER+I  +CGYPLC
Sbjct: 1    MAKDHVIAIKDAVHRLQLSLLEGIQDENKLFAAGSVMSQSDYQDVVTERSITNLCGYPLC 60

Query: 865  RNSLPSERPRKGRYRISLKEHKVFDLQETYMYCSSKCLIDSRAFAANLQEERSSTLNPAK 686
             NSLP ERPRKGRYRISLKEHKV+DL ETYMYCS+ C+++S+AF A+LQEERSSTLNP K
Sbjct: 61   GNSLPLERPRKGRYRISLKEHKVYDLHETYMYCSTNCVVNSQAFVASLQEERSSTLNPVK 120

Query: 685  LDQLVKLFEGVS-SDSDVDMGKNGDLGLSELKIQEKTE--GGGVPMEEWIGPANAIDGYV 515
            L+++++LFEG+S  +S    GKN DL LS+L+IQE T+   G V ++EWIGP+NAI+GYV
Sbjct: 121  LNEILRLFEGLSLEESSGGFGKNSDLELSKLRIQEMTDTGSGEVSLDEWIGPSNAIEGYV 180

Query: 514  PRRDKNLKARQLNNDKNGGKQEKVGTKDRFGDPNVLDIMSHDMNFTSTIIFHDEYSVSKT 335
            P +D     +Q  N + G K E    +       + D   +DM+FTST+I  DEYS+SK+
Sbjct: 181  PLKDSCSNIQQARNLEKGCKSEHAYIQ------QIKDNFFNDMDFTSTLIIQDEYSISKS 234

Query: 334  VTPV------KAREPKGKLTSKDLNCENKPMQKSGKYKNATGTDDKVNVSE 200
              P       K  + KGK+  KD+  +++  +  G+  +     +K N+ +
Sbjct: 235  PDPARSISGHKTDKQKGKMKHKDMK-DDESSELEGRVVSEGNKIEKKNLDK 284


>ref|XP_011044665.1| PREDICTED: putative RNA polymerase II subunit B1 CTD phosphatase
            RPAP2 homolog isoform X1 [Populus euphratica]
            gi|743902643|ref|XP_011044666.1| PREDICTED: putative RNA
            polymerase II subunit B1 CTD phosphatase RPAP2 homolog
            isoform X1 [Populus euphratica]
          Length = 733

 Score =  285 bits (728), Expect = 8e-74
 Identities = 150/289 (51%), Positives = 195/289 (67%), Gaps = 11/289 (3%)
 Frame = -2

Query: 1045 MAKDEVLAVKDAVHKVQLCLLEGIEHERLLLAAGSLISRDDYSDVVTERTIAEMCGYPLC 866
            MAKD++  VKD ++K+QL LLEGI++E  L AAGS++SR DY DVVTERTIA +CGYPLC
Sbjct: 1    MAKDQLTVVKDTIYKLQLSLLEGIQNEDQLFAAGSIMSRSDYEDVVTERTIANLCGYPLC 60

Query: 865  RNSLPSERPRKGRYRISLKEHKVFDLQETYMYCSSKCLIDSRAFAANLQEERSSTLNPAK 686
             NSLPS+RP+KGRYRISLKEHKV+DL ETYMYCSS C+++SR F+ +LQEER   LNPAK
Sbjct: 61   GNSLPSDRPQKGRYRISLKEHKVYDLNETYMYCSSSCVVNSRTFSGSLQEERCLVLNPAK 120

Query: 685  LDQLVKLFEGVSSDSDVDMGKNGDLGLSELKIQEKTE--GGGVPMEEWIGPANAIDGYVP 512
            L++++ LF+  +  S+  +GKNGDLG S LKI+EKTE   G V  E+WIGP+NAI+GYVP
Sbjct: 121  LNEVLMLFDNFNLGSEGGLGKNGDLGFSNLKIEEKTEKVEGEVSFEQWIGPSNAIEGYVP 180

Query: 511  RRDKNLKARQLNNDKNG--GKQEKVGTKDRFGDPNVLDIMSHDMNFTSTIIFHDEYSVSK 338
            +RD+N K+  L N K G      K  +K+        D +  DM+FTS+II  DEYS+SK
Sbjct: 181  QRDRNSKSLPLKNHKEGLEANTAKQSSKE--------DFIIDDMDFTSSIITQDEYSISK 232

Query: 337  TV-------TPVKAREPKGKLTSKDLNCENKPMQKSGKYKNATGTDDKV 212
            T        T  K ++PK K + K    ++    K        G    +
Sbjct: 233  TPSGLTDTNTDKKTQKPKAKGSHKGSKGQSSAHGKDDSRSETKGAKQSI 281


>ref|XP_009629199.1| PREDICTED: putative RNA polymerase II subunit B1 CTD phosphatase
            RPAP2 homolog isoform X4 [Nicotiana tomentosiformis]
          Length = 592

 Score =  285 bits (728), Expect = 8e-74
 Identities = 170/367 (46%), Positives = 229/367 (62%), Gaps = 31/367 (8%)
 Frame = -2

Query: 1045 MAKDEVLAVKDAVHKVQLCLLEGIEHERLLLAAGSLISRDDYSDVVTERTIAEMCGYPLC 866
            MA +EV+AVKDA+HK+QLCLLEGI+ E  L AAGSL+SR DY DVVTER+I  MCGYPLC
Sbjct: 17   MANEEVIAVKDAIHKLQLCLLEGIKDENQLFAAGSLLSRRDYQDVVTERSIVNMCGYPLC 76

Query: 865  RNSLPSERPRKGRYRISLKEHKVFDLQETYMYCSSKCLIDSRAFAANLQEERSSTLNPAK 686
             NSLPSERP KG YRISLKEHKV+DL ETY YCS+ C+++S AFA +LQ+ERS+TLN AK
Sbjct: 77   SNSLPSERPSKGHYRISLKEHKVYDLHETYTYCSTNCVVNSGAFARSLQDERSTTLNTAK 136

Query: 685  LDQLVKLFEGVSSDSDVDMGKNGDLGLSELKIQEKTE--GGGVPMEEWIGPANAIDGYVP 512
            L++++KLF G+   S  D+ +NGDLGLS+LKIQEK +  GG V MEEW+GP++AI+GYVP
Sbjct: 137  LNEVLKLFVGLHLHSIEDVKENGDLGLSKLKIQEKLDVKGGEVSMEEWMGPSDAIEGYVP 196

Query: 511  RRDKNLKARQLNNDKNGGKQEKVGTKDRFGDPNVLDIMSHDMNFTSTIIFHDEYSVSK-- 338
            +RD+++K   LNN K G K ++   +      N  +++ ++M+F+STII  D YS SK  
Sbjct: 197  QRDRSVKPALLNNIKKGFKNKQTKLQ------NEKNMILNEMDFSSTIITQDGYSSSKLP 250

Query: 337  ----TVTPVKAREPKGKLTSKDLNCENKPMQK--------SGKYKNATGTDD------KV 212
                 V+  K +E + K + +  + +   + K        SG+    T ++D      K 
Sbjct: 251  VSVNVVSSKKVKEAQTKTSYEGRDADVSILGKQVDALQLHSGEETEKTDSNDRSYKVDKF 310

Query: 211  NVSEDVAGTSQSHDTRAVK-----KGHEGKESAAGAT----GXXXXXXXXXXXKAACSVT 59
            +  E  +G  Q HD + +          G+E A+                   K   SVT
Sbjct: 311  DNGEVSSGPCQ-HDVKNISLEVLDMSDAGREHASDGAREKQSLRSSLKSSNYTKMTRSVT 369

Query: 58   WADEKTD 38
            WADE  D
Sbjct: 370  WADENID 376


>ref|XP_009629198.1| PREDICTED: putative RNA polymerase II subunit B1 CTD phosphatase
            RPAP2 homolog isoform X3 [Nicotiana tomentosiformis]
          Length = 656

 Score =  285 bits (728), Expect = 8e-74
 Identities = 170/367 (46%), Positives = 229/367 (62%), Gaps = 31/367 (8%)
 Frame = -2

Query: 1045 MAKDEVLAVKDAVHKVQLCLLEGIEHERLLLAAGSLISRDDYSDVVTERTIAEMCGYPLC 866
            MA +EV+AVKDA+HK+QLCLLEGI+ E  L AAGSL+SR DY DVVTER+I  MCGYPLC
Sbjct: 17   MANEEVIAVKDAIHKLQLCLLEGIKDENQLFAAGSLLSRRDYQDVVTERSIVNMCGYPLC 76

Query: 865  RNSLPSERPRKGRYRISLKEHKVFDLQETYMYCSSKCLIDSRAFAANLQEERSSTLNPAK 686
             NSLPSERP KG YRISLKEHKV+DL ETY YCS+ C+++S AFA +LQ+ERS+TLN AK
Sbjct: 77   SNSLPSERPSKGHYRISLKEHKVYDLHETYTYCSTNCVVNSGAFARSLQDERSTTLNTAK 136

Query: 685  LDQLVKLFEGVSSDSDVDMGKNGDLGLSELKIQEKTE--GGGVPMEEWIGPANAIDGYVP 512
            L++++KLF G+   S  D+ +NGDLGLS+LKIQEK +  GG V MEEW+GP++AI+GYVP
Sbjct: 137  LNEVLKLFVGLHLHSIEDVKENGDLGLSKLKIQEKLDVKGGEVSMEEWMGPSDAIEGYVP 196

Query: 511  RRDKNLKARQLNNDKNGGKQEKVGTKDRFGDPNVLDIMSHDMNFTSTIIFHDEYSVSK-- 338
            +RD+++K   LNN K G K ++   +      N  +++ ++M+F+STII  D YS SK  
Sbjct: 197  QRDRSVKPALLNNIKKGFKNKQTKLQ------NEKNMILNEMDFSSTIITQDGYSSSKLP 250

Query: 337  ----TVTPVKAREPKGKLTSKDLNCENKPMQK--------SGKYKNATGTDD------KV 212
                 V+  K +E + K + +  + +   + K        SG+    T ++D      K 
Sbjct: 251  VSVNVVSSKKVKEAQTKTSYEGRDADVSILGKQVDALQLHSGEETEKTDSNDRSYKVDKF 310

Query: 211  NVSEDVAGTSQSHDTRAVK-----KGHEGKESAAGAT----GXXXXXXXXXXXKAACSVT 59
            +  E  +G  Q HD + +          G+E A+                   K   SVT
Sbjct: 311  DNGEVSSGPCQ-HDVKNISLEVLDMSDAGREHASDGAREKQSLRSSLKSSNYTKMTRSVT 369

Query: 58   WADEKTD 38
            WADE  D
Sbjct: 370  WADENID 376


>ref|XP_009629194.1| PREDICTED: putative RNA polymerase II subunit B1 CTD phosphatase
            RPAP2 homolog isoform X2 [Nicotiana tomentosiformis]
            gi|697149972|ref|XP_009629195.1| PREDICTED: putative RNA
            polymerase II subunit B1 CTD phosphatase RPAP2 homolog
            isoform X2 [Nicotiana tomentosiformis]
            gi|697149974|ref|XP_009629196.1| PREDICTED: putative RNA
            polymerase II subunit B1 CTD phosphatase RPAP2 homolog
            isoform X2 [Nicotiana tomentosiformis]
            gi|697149976|ref|XP_009629197.1| PREDICTED: putative RNA
            polymerase II subunit B1 CTD phosphatase RPAP2 homolog
            isoform X2 [Nicotiana tomentosiformis]
          Length = 664

 Score =  285 bits (728), Expect = 8e-74
 Identities = 170/367 (46%), Positives = 229/367 (62%), Gaps = 31/367 (8%)
 Frame = -2

Query: 1045 MAKDEVLAVKDAVHKVQLCLLEGIEHERLLLAAGSLISRDDYSDVVTERTIAEMCGYPLC 866
            MA +EV+AVKDA+HK+QLCLLEGI+ E  L AAGSL+SR DY DVVTER+I  MCGYPLC
Sbjct: 1    MANEEVIAVKDAIHKLQLCLLEGIKDENQLFAAGSLLSRRDYQDVVTERSIVNMCGYPLC 60

Query: 865  RNSLPSERPRKGRYRISLKEHKVFDLQETYMYCSSKCLIDSRAFAANLQEERSSTLNPAK 686
             NSLPSERP KG YRISLKEHKV+DL ETY YCS+ C+++S AFA +LQ+ERS+TLN AK
Sbjct: 61   SNSLPSERPSKGHYRISLKEHKVYDLHETYTYCSTNCVVNSGAFARSLQDERSTTLNTAK 120

Query: 685  LDQLVKLFEGVSSDSDVDMGKNGDLGLSELKIQEKTE--GGGVPMEEWIGPANAIDGYVP 512
            L++++KLF G+   S  D+ +NGDLGLS+LKIQEK +  GG V MEEW+GP++AI+GYVP
Sbjct: 121  LNEVLKLFVGLHLHSIEDVKENGDLGLSKLKIQEKLDVKGGEVSMEEWMGPSDAIEGYVP 180

Query: 511  RRDKNLKARQLNNDKNGGKQEKVGTKDRFGDPNVLDIMSHDMNFTSTIIFHDEYSVSK-- 338
            +RD+++K   LNN K G K ++   +      N  +++ ++M+F+STII  D YS SK  
Sbjct: 181  QRDRSVKPALLNNIKKGFKNKQTKLQ------NEKNMILNEMDFSSTIITQDGYSSSKLP 234

Query: 337  ----TVTPVKAREPKGKLTSKDLNCENKPMQK--------SGKYKNATGTDD------KV 212
                 V+  K +E + K + +  + +   + K        SG+    T ++D      K 
Sbjct: 235  VSVNVVSSKKVKEAQTKTSYEGRDADVSILGKQVDALQLHSGEETEKTDSNDRSYKVDKF 294

Query: 211  NVSEDVAGTSQSHDTRAVK-----KGHEGKESAAGAT----GXXXXXXXXXXXKAACSVT 59
            +  E  +G  Q HD + +          G+E A+                   K   SVT
Sbjct: 295  DNGEVSSGPCQ-HDVKNISLEVLDMSDAGREHASDGAREKQSLRSSLKSSNYTKMTRSVT 353

Query: 58   WADEKTD 38
            WADE  D
Sbjct: 354  WADENID 360


>ref|XP_009629188.1| PREDICTED: putative RNA polymerase II subunit B1 CTD phosphatase
            RPAP2 homolog isoform X1 [Nicotiana tomentosiformis]
            gi|697149962|ref|XP_009629189.1| PREDICTED: putative RNA
            polymerase II subunit B1 CTD phosphatase RPAP2 homolog
            isoform X1 [Nicotiana tomentosiformis]
            gi|697149964|ref|XP_009629190.1| PREDICTED: putative RNA
            polymerase II subunit B1 CTD phosphatase RPAP2 homolog
            isoform X1 [Nicotiana tomentosiformis]
            gi|697149966|ref|XP_009629192.1| PREDICTED: putative RNA
            polymerase II subunit B1 CTD phosphatase RPAP2 homolog
            isoform X1 [Nicotiana tomentosiformis]
            gi|697149968|ref|XP_009629193.1| PREDICTED: putative RNA
            polymerase II subunit B1 CTD phosphatase RPAP2 homolog
            isoform X1 [Nicotiana tomentosiformis]
          Length = 680

 Score =  285 bits (728), Expect = 8e-74
 Identities = 170/367 (46%), Positives = 229/367 (62%), Gaps = 31/367 (8%)
 Frame = -2

Query: 1045 MAKDEVLAVKDAVHKVQLCLLEGIEHERLLLAAGSLISRDDYSDVVTERTIAEMCGYPLC 866
            MA +EV+AVKDA+HK+QLCLLEGI+ E  L AAGSL+SR DY DVVTER+I  MCGYPLC
Sbjct: 17   MANEEVIAVKDAIHKLQLCLLEGIKDENQLFAAGSLLSRRDYQDVVTERSIVNMCGYPLC 76

Query: 865  RNSLPSERPRKGRYRISLKEHKVFDLQETYMYCSSKCLIDSRAFAANLQEERSSTLNPAK 686
             NSLPSERP KG YRISLKEHKV+DL ETY YCS+ C+++S AFA +LQ+ERS+TLN AK
Sbjct: 77   SNSLPSERPSKGHYRISLKEHKVYDLHETYTYCSTNCVVNSGAFARSLQDERSTTLNTAK 136

Query: 685  LDQLVKLFEGVSSDSDVDMGKNGDLGLSELKIQEKTE--GGGVPMEEWIGPANAIDGYVP 512
            L++++KLF G+   S  D+ +NGDLGLS+LKIQEK +  GG V MEEW+GP++AI+GYVP
Sbjct: 137  LNEVLKLFVGLHLHSIEDVKENGDLGLSKLKIQEKLDVKGGEVSMEEWMGPSDAIEGYVP 196

Query: 511  RRDKNLKARQLNNDKNGGKQEKVGTKDRFGDPNVLDIMSHDMNFTSTIIFHDEYSVSK-- 338
            +RD+++K   LNN K G K ++   +      N  +++ ++M+F+STII  D YS SK  
Sbjct: 197  QRDRSVKPALLNNIKKGFKNKQTKLQ------NEKNMILNEMDFSSTIITQDGYSSSKLP 250

Query: 337  ----TVTPVKAREPKGKLTSKDLNCENKPMQK--------SGKYKNATGTDD------KV 212
                 V+  K +E + K + +  + +   + K        SG+    T ++D      K 
Sbjct: 251  VSVNVVSSKKVKEAQTKTSYEGRDADVSILGKQVDALQLHSGEETEKTDSNDRSYKVDKF 310

Query: 211  NVSEDVAGTSQSHDTRAVK-----KGHEGKESAAGAT----GXXXXXXXXXXXKAACSVT 59
            +  E  +G  Q HD + +          G+E A+                   K   SVT
Sbjct: 311  DNGEVSSGPCQ-HDVKNISLEVLDMSDAGREHASDGAREKQSLRSSLKSSNYTKMTRSVT 369

Query: 58   WADEKTD 38
            WADE  D
Sbjct: 370  WADENID 376