BLASTX nr result
ID: Perilla23_contig00013038
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Perilla23_contig00013038
(389 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004250750.2| PREDICTED: single-stranded DNA-bindig protei... 63 1e-07
ref|XP_010313085.1| PREDICTED: single-stranded DNA-bindig protei... 63 1e-07
ref|XP_004250749.1| PREDICTED: single-stranded DNA-bindig protei... 63 1e-07
pdb|3R9Y|A Chain A, Crystal Structure Of Stwhy2 K67a (Form I) gi... 62 1e-07
pdb|3N1H|A Chain A, Crystal Structure Of Stwhy2 gi|302566180|pdb... 62 1e-07
ref|NP_001275393.1| single-stranded DNA-bindig protein WHY2, mit... 62 1e-07
ref|XP_006352086.1| PREDICTED: Why2 protein [Solanum tuberosum] 62 2e-07
ref|XP_012079715.1| PREDICTED: single-stranded DNA-bindig protei... 56 3e-07
emb|CDP11528.1| unnamed protein product [Coffea canephora] 59 1e-06
ref|XP_006390788.1| hypothetical protein EUTSA_v10019058mg [Eutr... 59 1e-06
ref|XP_006390787.1| hypothetical protein EUTSA_v10019058mg [Eutr... 59 1e-06
ref|XP_002888827.1| ATWHY2 [Arabidopsis lyrata subsp. lyrata] gi... 57 4e-06
gb|AAG51881.1|AC016162_2 unknown protein; 79476-81015 [Arabidops... 57 5e-06
pdb|4KOP|A Chain A, Crystal Structure Of Why2 From Arabidopsis T... 57 5e-06
ref|NP_177282.2| single-stranded DNA-binding protein WHY2 [Arabi... 57 5e-06
>ref|XP_004250750.2| PREDICTED: single-stranded DNA-bindig protein WHY2, mitochondrial
isoform X2 [Solanum lycopersicum]
Length = 240
Score = 62.8 bits (151), Expect = 1e-07
Identities = 44/122 (36%), Positives = 55/122 (45%)
Frame = -2
Query: 367 LIFLPFWKSAAKILHLTQFTRERLHQFVFFATEVGSLINLEANDPCKFFHDPLMLSRLIF 188
+I L FW S + ++ E+ F ATEVGSLI++ D +FFHDP MLS
Sbjct: 96 VIMLTFWPSVGE----RKYDWEKRQLFALSATEVGSLISMGTRDSSEFFHDPSMLS---- 147
Query: 187 FMLLHYLSFLQSVVPNF*YFSLS*FSCEFNLNLICSNAGQVK*SLSFKAHADGSDYFVSL 8
SNAGQV+ SLS K +ADGS YFVSL
Sbjct: 148 -----------------------------------SNAGQVRKSLSIKPNADGSGYFVSL 172
Query: 7 SI 2
S+
Sbjct: 173 SV 174
>ref|XP_010313085.1| PREDICTED: single-stranded DNA-bindig protein WHY2, mitochondrial
isoform X1 [Solanum lycopersicum]
Length = 241
Score = 62.8 bits (151), Expect = 1e-07
Identities = 44/122 (36%), Positives = 55/122 (45%)
Frame = -2
Query: 367 LIFLPFWKSAAKILHLTQFTRERLHQFVFFATEVGSLINLEANDPCKFFHDPLMLSRLIF 188
+I L FW S + ++ E+ F ATEVGSLI++ D +FFHDP MLS
Sbjct: 97 VIMLTFWPSVGE----RKYDWEKRQLFALSATEVGSLISMGTRDSSEFFHDPSMLS---- 148
Query: 187 FMLLHYLSFLQSVVPNF*YFSLS*FSCEFNLNLICSNAGQVK*SLSFKAHADGSDYFVSL 8
SNAGQV+ SLS K +ADGS YFVSL
Sbjct: 149 -----------------------------------SNAGQVRKSLSIKPNADGSGYFVSL 173
Query: 7 SI 2
S+
Sbjct: 174 SV 175
>ref|XP_004250749.1| PREDICTED: single-stranded DNA-bindig protein WHY2, mitochondrial
isoform X3 [Solanum lycopersicum]
Length = 238
Score = 62.8 bits (151), Expect = 1e-07
Identities = 44/122 (36%), Positives = 55/122 (45%)
Frame = -2
Query: 367 LIFLPFWKSAAKILHLTQFTRERLHQFVFFATEVGSLINLEANDPCKFFHDPLMLSRLIF 188
+I L FW S + ++ E+ F ATEVGSLI++ D +FFHDP MLS
Sbjct: 94 VIMLTFWPSVGE----RKYDWEKRQLFALSATEVGSLISMGTRDSSEFFHDPSMLS---- 145
Query: 187 FMLLHYLSFLQSVVPNF*YFSLS*FSCEFNLNLICSNAGQVK*SLSFKAHADGSDYFVSL 8
SNAGQV+ SLS K +ADGS YFVSL
Sbjct: 146 -----------------------------------SNAGQVRKSLSIKPNADGSGYFVSL 170
Query: 7 SI 2
S+
Sbjct: 171 SV 172
>pdb|3R9Y|A Chain A, Crystal Structure Of Stwhy2 K67a (Form I)
gi|347948613|pdb|3R9Z|A Chain A, Crystal Structure Of
Stwhy2 K67a (Form Ii) gi|347948614|pdb|3RA0|A Chain A,
Crystal Structure Of A Stwhy2 K67a-Dt32 Complex
Length = 178
Score = 62.4 bits (150), Expect = 1e-07
Identities = 43/122 (35%), Positives = 55/122 (45%)
Frame = -2
Query: 367 LIFLPFWKSAAKILHLTQFTRERLHQFVFFATEVGSLINLEANDPCKFFHDPLMLSRLIF 188
+I L FW S + ++ E+ F ATEVGSLI++ D +FFHDP MLS
Sbjct: 48 VIMLTFWPSVGE----RKYDWEKRQLFALSATEVGSLISMGTRDSSEFFHDPSMLS---- 99
Query: 187 FMLLHYLSFLQSVVPNF*YFSLS*FSCEFNLNLICSNAGQVK*SLSFKAHADGSDYFVSL 8
SNAGQV+ SLS K +ADGS YF+SL
Sbjct: 100 -----------------------------------SNAGQVRKSLSIKPNADGSGYFISL 124
Query: 7 SI 2
S+
Sbjct: 125 SV 126
>pdb|3N1H|A Chain A, Crystal Structure Of Stwhy2 gi|302566180|pdb|3N1I|A Chain
A, Crystal Structure Of A Stwhy2-Ere32 Complex
gi|302566182|pdb|3N1J|A Chain A, Crystal Structure Of A
Stwhy2-Dt32 Complex gi|302566184|pdb|3N1K|A Chain A,
Crystal Structure Of A Stwhy2-Cere32 Complex
gi|302566186|pdb|3N1L|A Chain A, Crystal Structure Of A
Stwhy2-Rcere32 Complex
Length = 178
Score = 62.4 bits (150), Expect = 1e-07
Identities = 43/122 (35%), Positives = 55/122 (45%)
Frame = -2
Query: 367 LIFLPFWKSAAKILHLTQFTRERLHQFVFFATEVGSLINLEANDPCKFFHDPLMLSRLIF 188
+I L FW S + ++ E+ F ATEVGSLI++ D +FFHDP MLS
Sbjct: 48 VIMLTFWPSVGE----RKYDWEKRQLFALSATEVGSLISMGTRDSSEFFHDPSMLS---- 99
Query: 187 FMLLHYLSFLQSVVPNF*YFSLS*FSCEFNLNLICSNAGQVK*SLSFKAHADGSDYFVSL 8
SNAGQV+ SLS K +ADGS YF+SL
Sbjct: 100 -----------------------------------SNAGQVRKSLSIKPNADGSGYFISL 124
Query: 7 SI 2
S+
Sbjct: 125 SV 126
>ref|NP_001275393.1| single-stranded DNA-bindig protein WHY2, mitochondrial [Solanum
tuberosum] gi|426021772|sp|D9J034.1|WHY2_SOLTU RecName:
Full=Single-stranded DNA-bindig protein WHY2,
mitochondrial; AltName: Full=Protein WHIRLY 2;
Short=StWHY2; Flags: Precursor
gi|298359665|gb|ADI77438.1| Why2 protein [Solanum
tuberosum]
Length = 238
Score = 62.4 bits (150), Expect = 1e-07
Identities = 43/122 (35%), Positives = 55/122 (45%)
Frame = -2
Query: 367 LIFLPFWKSAAKILHLTQFTRERLHQFVFFATEVGSLINLEANDPCKFFHDPLMLSRLIF 188
+I L FW S + ++ E+ F ATEVGSLI++ D +FFHDP MLS
Sbjct: 94 VIMLTFWPSVGE----RKYDWEKRQLFALSATEVGSLISMGTRDSSEFFHDPSMLS---- 145
Query: 187 FMLLHYLSFLQSVVPNF*YFSLS*FSCEFNLNLICSNAGQVK*SLSFKAHADGSDYFVSL 8
SNAGQV+ SLS K +ADGS YF+SL
Sbjct: 146 -----------------------------------SNAGQVRKSLSIKPNADGSGYFISL 170
Query: 7 SI 2
S+
Sbjct: 171 SV 172
>ref|XP_006352086.1| PREDICTED: Why2 protein [Solanum tuberosum]
Length = 238
Score = 61.6 bits (148), Expect = 2e-07
Identities = 42/122 (34%), Positives = 55/122 (45%)
Frame = -2
Query: 367 LIFLPFWKSAAKILHLTQFTRERLHQFVFFATEVGSLINLEANDPCKFFHDPLMLSRLIF 188
+I L FW S + ++ E+ +ATEVGSLI++ D +FFHDP MLS
Sbjct: 94 VIMLTFWPSVGE----RKYDWEKRQVMCLYATEVGSLISMGTRDSSEFFHDPSMLS---- 145
Query: 187 FMLLHYLSFLQSVVPNF*YFSLS*FSCEFNLNLICSNAGQVK*SLSFKAHADGSDYFVSL 8
SNAGQV+ SLS K +ADGS YF+SL
Sbjct: 146 -----------------------------------SNAGQVRKSLSIKPNADGSGYFISL 170
Query: 7 SI 2
S+
Sbjct: 171 SV 172
>ref|XP_012079715.1| PREDICTED: single-stranded DNA-bindig protein WHY2, mitochondrial
[Jatropha curcas] gi|643721531|gb|KDP31614.1|
hypothetical protein JCGZ_14839 [Jatropha curcas]
Length = 230
Score = 56.2 bits (134), Expect(2) = 3e-07
Identities = 38/105 (36%), Positives = 46/105 (43%)
Frame = -2
Query: 316 QFTRERLHQFVFFATEVGSLINLEANDPCKFFHDPLMLSRLIFFMLLHYLSFLQSVVPNF 137
++ R F ATEVGSLI+L D +FFHDP MLS
Sbjct: 99 KYDYSRRQCFALSATEVGSLISLGPKDSSEFFHDPSMLS--------------------- 137
Query: 136 *YFSLS*FSCEFNLNLICSNAGQVK*SLSFKAHADGSDYFVSLSI 2
SNAGQV+ SLS K HADG YF+SL++
Sbjct: 138 ------------------SNAGQVRKSLSIKPHADGGGYFLSLTV 164
Score = 24.6 bits (52), Expect(2) = 3e-07
Identities = 9/11 (81%), Positives = 11/11 (100%)
Frame = -1
Query: 326 APYSIYKGKAA 294
APYS++KGKAA
Sbjct: 51 APYSVFKGKAA 61
>emb|CDP11528.1| unnamed protein product [Coffea canephora]
Length = 126
Score = 59.3 bits (142), Expect = 1e-06
Identities = 38/99 (38%), Positives = 45/99 (45%)
Frame = -2
Query: 298 LHQFVFFATEVGSLINLEANDPCKFFHDPLMLSRLIFFMLLHYLSFLQSVVPNF*YFSLS 119
+H F ATEVGS+IN+ D +FFHDP MLS
Sbjct: 1 MHCFALSATEVGSMINMGPQDTREFFHDPAMLS--------------------------- 33
Query: 118 *FSCEFNLNLICSNAGQVK*SLSFKAHADGSDYFVSLSI 2
SNAGQV+ SLS K HADGS YF SL++
Sbjct: 34 ------------SNAGQVRKSLSIKPHADGSGYFFSLNV 60
>ref|XP_006390788.1| hypothetical protein EUTSA_v10019058mg [Eutrema salsugineum]
gi|557087222|gb|ESQ28074.1| hypothetical protein
EUTSA_v10019058mg [Eutrema salsugineum]
Length = 241
Score = 59.3 bits (142), Expect = 1e-06
Identities = 38/101 (37%), Positives = 47/101 (46%)
Frame = -2
Query: 304 ERLHQFVFFATEVGSLINLEANDPCKFFHDPLMLSRLIFFMLLHYLSFLQSVVPNF*YFS 125
E+ F ATEVGSLI++ +ND +FFHDP M S
Sbjct: 113 EKKQLFALSATEVGSLISMGSNDSSEFFHDPSMKS------------------------- 147
Query: 124 LS*FSCEFNLNLICSNAGQVK*SLSFKAHADGSDYFVSLSI 2
SNAGQV+ SLS K HADGS YF+SL++
Sbjct: 148 --------------SNAGQVRKSLSIKPHADGSGYFISLTV 174
>ref|XP_006390787.1| hypothetical protein EUTSA_v10019058mg [Eutrema salsugineum]
gi|557087221|gb|ESQ28073.1| hypothetical protein
EUTSA_v10019058mg [Eutrema salsugineum]
Length = 240
Score = 59.3 bits (142), Expect = 1e-06
Identities = 38/101 (37%), Positives = 47/101 (46%)
Frame = -2
Query: 304 ERLHQFVFFATEVGSLINLEANDPCKFFHDPLMLSRLIFFMLLHYLSFLQSVVPNF*YFS 125
E+ F ATEVGSLI++ +ND +FFHDP M S
Sbjct: 112 EKKQLFALSATEVGSLISMGSNDSSEFFHDPSMKS------------------------- 146
Query: 124 LS*FSCEFNLNLICSNAGQVK*SLSFKAHADGSDYFVSLSI 2
SNAGQV+ SLS K HADGS YF+SL++
Sbjct: 147 --------------SNAGQVRKSLSIKPHADGSGYFISLTV 173
>ref|XP_002888827.1| ATWHY2 [Arabidopsis lyrata subsp. lyrata]
gi|297334668|gb|EFH65086.1| ATWHY2 [Arabidopsis lyrata
subsp. lyrata]
Length = 242
Score = 57.4 bits (137), Expect = 4e-06
Identities = 37/101 (36%), Positives = 46/101 (45%)
Frame = -2
Query: 304 ERLHQFVFFATEVGSLINLEANDPCKFFHDPLMLSRLIFFMLLHYLSFLQSVVPNF*YFS 125
E+ +F TEVGSLI++ + D +FFHDP M S
Sbjct: 112 EKKQKFALSPTEVGSLISMGSKDSSEFFHDPSMKS------------------------- 146
Query: 124 LS*FSCEFNLNLICSNAGQVK*SLSFKAHADGSDYFVSLSI 2
SNAGQV+ SLS K HADGS YF+SLS+
Sbjct: 147 --------------SNAGQVRKSLSIKPHADGSGYFISLSV 173
>gb|AAG51881.1|AC016162_2 unknown protein; 79476-81015 [Arabidopsis thaliana]
Length = 237
Score = 57.0 bits (136), Expect = 5e-06
Identities = 37/101 (36%), Positives = 46/101 (45%)
Frame = -2
Query: 304 ERLHQFVFFATEVGSLINLEANDPCKFFHDPLMLSRLIFFMLLHYLSFLQSVVPNF*YFS 125
E+ +F TEVGSLI++ + D +FFHDP M S
Sbjct: 107 EKKQKFALSPTEVGSLISMGSKDSSEFFHDPSMKS------------------------- 141
Query: 124 LS*FSCEFNLNLICSNAGQVK*SLSFKAHADGSDYFVSLSI 2
SNAGQV+ SLS K HADGS YF+SLS+
Sbjct: 142 --------------SNAGQVRKSLSVKPHADGSGYFISLSV 168
>pdb|4KOP|A Chain A, Crystal Structure Of Why2 From Arabidopsis Thaliana
gi|557805000|pdb|4KOP|B Chain B, Crystal Structure Of
Why2 From Arabidopsis Thaliana gi|557805001|pdb|4KOP|C
Chain C, Crystal Structure Of Why2 From Arabidopsis
Thaliana gi|557805002|pdb|4KOP|D Chain D, Crystal
Structure Of Why2 From Arabidopsis Thaliana
Length = 177
Score = 57.0 bits (136), Expect = 5e-06
Identities = 37/101 (36%), Positives = 46/101 (45%)
Frame = -2
Query: 304 ERLHQFVFFATEVGSLINLEANDPCKFFHDPLMLSRLIFFMLLHYLSFLQSVVPNF*YFS 125
E+ +F TEVGSLI++ + D +FFHDP M S
Sbjct: 65 EKKQKFALSPTEVGSLISMGSKDSSEFFHDPSMKS------------------------- 99
Query: 124 LS*FSCEFNLNLICSNAGQVK*SLSFKAHADGSDYFVSLSI 2
SNAGQV+ SLS K HADGS YF+SLS+
Sbjct: 100 --------------SNAGQVRKSLSVKPHADGSGYFISLSV 126
>ref|NP_177282.2| single-stranded DNA-binding protein WHY2 [Arabidopsis thaliana]
gi|75161474|sp|Q8VYF7.1|WHY2_ARATH RecName:
Full=Single-stranded DNA-binding protein WHY2,
mitochondrial; AltName: Full=Protein WHIRLY 2;
Short=AtWHY2; Flags: Precursor
gi|18175814|gb|AAL59932.1| unknown protein [Arabidopsis
thaliana] gi|21689867|gb|AAM67494.1| unknown protein
[Arabidopsis thaliana] gi|225898076|dbj|BAH30370.1|
hypothetical protein [Arabidopsis thaliana]
gi|332197060|gb|AEE35181.1| single-stranded DNA-binding
protein WHY2 [Arabidopsis thaliana]
Length = 238
Score = 57.0 bits (136), Expect = 5e-06
Identities = 37/101 (36%), Positives = 46/101 (45%)
Frame = -2
Query: 304 ERLHQFVFFATEVGSLINLEANDPCKFFHDPLMLSRLIFFMLLHYLSFLQSVVPNF*YFS 125
E+ +F TEVGSLI++ + D +FFHDP M S
Sbjct: 108 EKKQKFALSPTEVGSLISMGSKDSSEFFHDPSMKS------------------------- 142
Query: 124 LS*FSCEFNLNLICSNAGQVK*SLSFKAHADGSDYFVSLSI 2
SNAGQV+ SLS K HADGS YF+SLS+
Sbjct: 143 --------------SNAGQVRKSLSVKPHADGSGYFISLSV 169