BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Perilla23_contig00011634
         (2539 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_012831645.1| PREDICTED: RNA polymerase II C-terminal doma...  1029   0.0  
ref|XP_011071314.1| PREDICTED: RNA polymerase II C-terminal doma...   984   0.0  
emb|CDP18969.1| unnamed protein product [Coffea canephora]            809   0.0  
emb|CBI35661.3| unnamed protein product [Vitis vinifera]              800   0.0  
ref|XP_009803071.1| PREDICTED: RNA polymerase II C-terminal doma...   798   0.0  
ref|XP_010656789.1| PREDICTED: RNA polymerase II C-terminal doma...   795   0.0  
ref|XP_012831646.1| PREDICTED: RNA polymerase II C-terminal doma...   731   0.0  
ref|XP_010656786.1| PREDICTED: RNA polymerase II C-terminal doma...   790   0.0  
ref|XP_010656784.1| PREDICTED: RNA polymerase II C-terminal doma...   788   0.0  
ref|XP_006341905.1| PREDICTED: RNA polymerase II C-terminal doma...   788   0.0  
ref|XP_009627456.1| PREDICTED: RNA polymerase II C-terminal doma...   782   0.0  
ref|XP_004252660.1| PREDICTED: RNA polymerase II C-terminal doma...   777   0.0  
ref|XP_012831647.1| PREDICTED: RNA polymerase II C-terminal doma...   731   0.0  
ref|XP_010249185.1| PREDICTED: RNA polymerase II C-terminal doma...   765   0.0  
ref|XP_007043830.1| RNA polymerase II C-terminal domain phosphat...   762   0.0  
ref|XP_007225412.1| hypothetical protein PRUPE_ppa000589mg [Prun...   762   0.0  
ref|XP_002512650.1| RNA polymerase II ctd phosphatase, putative ...   759   0.0  
ref|XP_002304648.2| hypothetical protein POPTR_0003s16280g [Popu...   756   0.0  
ref|XP_002304714.2| hypothetical protein POPTR_0003s16280g [Popu...   756   0.0  
ref|XP_012459418.1| PREDICTED: RNA polymerase II C-terminal doma...   754   0.0  

>ref|XP_012831645.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 3
            isoform X1 [Erythranthe guttatus]
            gi|604343093|gb|EYU42076.1| hypothetical protein
            MIMGU_mgv1a000356mg [Erythranthe guttata]
          Length = 1220

 Score = 1029 bits (2660), Expect = 0.0
 Identities = 538/748 (71%), Positives = 602/748 (80%), Gaps = 4/748 (0%)
 Frame = -2

Query: 2487 HNVNAAVNSLMSWQPVPSSTASMDTLSDPENSNVSIVDPANNFRSPLLKSSSTRSRDPRL 2308
            H+VN AVN L S QPV SS+ +MDT + PE SN        + R+P+LKS+S +SRDPRL
Sbjct: 490  HHVNPAVNILTSVQPVVSSSVAMDTSATPEISN--------SLRNPVLKSTSAKSRDPRL 541

Query: 2307 RLADSDVGPRNLNQGLPSIGSDESKSMFAGVMSSRKQKIVEELVLDGPALKRRKNELSGP 2128
            RL++SD G +N N+ L ++GS+ESK   +G++SSRKQK  EELVL+GPALKR++NELSGP
Sbjct: 542  RLSNSDAGAKNPNKSLSAVGSEESKWESSGMVSSRKQKTNEELVLNGPALKRQRNELSGP 601

Query: 2127 DTTLPLVTAISASQVAIPTPSFPVSNYIKSPLTSQTETLPVKXXXXXXXXXXXLRDIVGN 1948
             T +PLV+A S SQ+ +P     VS  I S LTSQ+E  P K           L+DI  +
Sbjct: 602  STAMPLVSATSTSQMTLP-----VSAPIMSLLTSQSEKFPSKNSNATSSLHSLLKDIAVD 656

Query: 1947 PSMLMSLLKMEHQKSSGDNNSATQMPNTNSILGVAPSTSGVLPFSSLLGQKPAGIV--PC 1774
            PS+ M++LKME+ KSS D  S TQ+ N+NS+LG  PS  GV+P SS +GQ  AG V  P 
Sbjct: 657  PSIWMNILKMENLKSSDDIKSMTQISNSNSVLGAVPSPVGVMPLSSTIGQISAGTVQIPS 716

Query: 1773 QTVSAEEPGKVRMKPRDPRRILHNNAPQKGVTTVSDQPKTTASSCSVMMGNSSAQGQENQ 1594
            Q VS EE GKVRMKPRDPRR+LHNNAPQK VT+V+DQPK  AS  S M    +   QE+Q
Sbjct: 717  QAVSVEESGKVRMKPRDPRRVLHNNAPQKDVTSVADQPKADASFGSAM----NTPKQEDQ 772

Query: 1593 KEKLVPSSCAKPPDITMQFTNNLRNIADIMSISQACIPSSILPQCVSSQPLQGHQV-GTE 1417
             E  + SS  KPPDITMQFTNNLRNIAD++S+SQ C  S +L Q  S QP QG  + G E
Sbjct: 773  LENKMSSSSMKPPDITMQFTNNLRNIADLLSVSQICTTSPVLAQIPSLQPAQGDLIAGKE 832

Query: 1416 TKIVANESVNFRSGSN-STSEAATSAPPRPLNAHAWSDVEHLFDGFDDHQKVAIQRERAR 1240
            T+    E  N R+ ++ +TSEAATS+PPRPLNA+AWSDVEHLF+GFDD QKVAIQRERAR
Sbjct: 833  TRGPIAEYGNIRNVTDITTSEAATSSPPRPLNANAWSDVEHLFEGFDDQQKVAIQRERAR 892

Query: 1239 RLEEQNKLFAAGKXXXXXXXXXXXLNSAKFVEVDPLHDEMLRKKEEQDREKPQRHLFRFP 1060
            RLEEQNKLFA  K           LNSAKFVEVDP HDEMLRKKEEQDREKP RHLFRFP
Sbjct: 893  RLEEQNKLFAVRKLCLVLDLDHTLLNSAKFVEVDPQHDEMLRKKEEQDREKPHRHLFRFP 952

Query: 1059 HMGMWTKLRPGIWNFLEKASKLYELHLYTMGNKYYATEMAKLLDPKGELFSGRVISRGDD 880
            HMGMWTKLRPG+WNFLEKASKLYELHLYTMGNKYYATEMAKLLDPKGELFSGRVISRGDD
Sbjct: 953  HMGMWTKLRPGVWNFLEKASKLYELHLYTMGNKYYATEMAKLLDPKGELFSGRVISRGDD 1012

Query: 879  GEPFDSDDRAPKNKDLEGVLGMESGVVIIDDSVRVWPHNKLNLIVVERYIYFPCSGRQFG 700
            GEPFDSDDRAPK+KDLEGVLGMESGVVIIDDS+RVWPHNKLNLIVVERYIYFPCS RQFG
Sbjct: 1013 GEPFDSDDRAPKSKDLEGVLGMESGVVIIDDSIRVWPHNKLNLIVVERYIYFPCSRRQFG 1072

Query: 699  LPGPSLLEIDHDERAEDGTLAACLTVIERIHEIFFGHESLDEGDVRNILACEQRKILAGC 520
            LPGPSLLEIDHDER EDGTLA+C TVIERIHE FFGHESL+E DVRNILA EQRKILAGC
Sbjct: 1073 LPGPSLLEIDHDERPEDGTLASCSTVIERIHENFFGHESLNEADVRNILASEQRKILAGC 1132

Query: 519  RIVFSRVFPVGEAKPHMHPLWQTAEQFGAVCTNQIDDQVTHVVANSLGTDKVNWALSTGR 340
            RIVFSRVFPVGEAKPHMHPLWQTAEQFGAVC NQID+ VTHVVANSLGTDKVNWALSTG+
Sbjct: 1133 RIVFSRVFPVGEAKPHMHPLWQTAEQFGAVCINQIDEHVTHVVANSLGTDKVNWALSTGK 1192

Query: 339  FVVHPGWVEASALLYRRANEHDFAIKQQ 256
            FVVHPGWVEASALLYRRANEHDFAIKQQ
Sbjct: 1193 FVVHPGWVEASALLYRRANEHDFAIKQQ 1220


>ref|XP_011071314.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 3
            [Sesamum indicum]
          Length = 1237

 Score =  984 bits (2544), Expect = 0.0
 Identities = 523/758 (68%), Positives = 578/758 (76%), Gaps = 14/758 (1%)
 Frame = -2

Query: 2487 HNVNAAVNSLMSWQPVPSSTASMDTLSDPENSNVSIVDPANNFRSPLLKSSSTRSRDPRL 2308
            HNVN A+N L S QPV SS+ + D L+ PE S    + P ++F SP+LKS + +SRDPRL
Sbjct: 497  HNVNVALNILSSGQPVVSSSTAKDVLAGPEISITRNIGPVSSFGSPVLKSLA-KSRDPRL 555

Query: 2307 RLADSDVGPRNLNQGLPSIGSDESKSMFAGVMSSRKQKIVEELVLDGPALKRRKNELSGP 2128
            RLA+ D G R LNQ +   G DESK    G+MSSRKQK VEELVLDGPALKR++NE+S P
Sbjct: 556  RLANPDTGARILNQSMSPAGGDESKLESLGMMSSRKQKTVEELVLDGPALKRQRNEISVP 615

Query: 2127 DTTLPLVTAISASQVAIPTPSFPVSNYIKSPLTSQTETLPVKXXXXXXXXXXXLRDIVGN 1948
            +TTLPLV+  S   V  P+ + PVS+ I SPL S +E LPVK           LRDI GN
Sbjct: 616  NTTLPLVSTTSIFPVTNPSATLPVSSPIASPLKSLSEKLPVKNANATTSLHSLLRDIAGN 675

Query: 1947 PSMLMSLLKMEHQKSSGDNNSATQMPNTNSILGVAPSTSGVLPFSSLLGQKPAGIV---- 1780
            PSM M++LKMEHQKSS D  S TQMP +NSILG  PST  V   S+ LG    G +    
Sbjct: 676  PSMWMNILKMEHQKSSDDIKSMTQMPKSNSILGAVPSTVRVPLSSTTLGHLILGAIFVAF 735

Query: 1779 -----PCQTVSAEEPGKVRMKPRDP-----RRILHNNAPQKGVTTVSDQPKTTASSCSVM 1630
                  C T      G +  KP D      RR+L +  P   +  + +  K         
Sbjct: 736  YLLIRLCST-----HGLLPEKPYDGKLIRFRRLLEH--PSTIIFVLEEAGK--------- 779

Query: 1629 MGNSSAQGQENQKEKLVPSSCAKPPDITMQFTNNLRNIADIMSISQACIPSSILPQCVSS 1450
            MGN S   QE+Q EK V SS  KPPDITMQFT+NLRNIADI+S+SQ  +PS +LPQ  SS
Sbjct: 780  MGNLSILKQEDQLEKSVSSSSVKPPDITMQFTSNLRNIADILSVSQPSVPSPVLPQIPSS 839

Query: 1449 QPLQGHQVGTETKIVANESVNFRSGSNSTSEAATSAPPRPLNAHAWSDVEHLFDGFDDHQ 1270
            QP+ GH  G ETK V  +S N R+G++ST+EAA + PPRPLNA+AWSDVEHLF+GFDD Q
Sbjct: 840  QPVLGHPAGMETKAVVTDSGNLRNGNDSTTEAAIAVPPRPLNANAWSDVEHLFEGFDDQQ 899

Query: 1269 KVAIQRERARRLEEQNKLFAAGKXXXXXXXXXXXLNSAKFVEVDPLHDEMLRKKEEQDRE 1090
            K AIQRERARRLEEQ K+F+  K           LNSAKFVEVDPLHDEMLRKKEEQDRE
Sbjct: 900  KAAIQRERARRLEEQKKMFSVRKLCLVLDLDHTLLNSAKFVEVDPLHDEMLRKKEEQDRE 959

Query: 1089 KPQRHLFRFPHMGMWTKLRPGIWNFLEKASKLYELHLYTMGNKYYATEMAKLLDPKGELF 910
            KPQRHLFRFPHMGMWTKLRPGIWNFLEKASKLYELHLYTMGNKYYATEMAKLLDPKGELF
Sbjct: 960  KPQRHLFRFPHMGMWTKLRPGIWNFLEKASKLYELHLYTMGNKYYATEMAKLLDPKGELF 1019

Query: 909  SGRVISRGDDGEPFDSDDRAPKNKDLEGVLGMESGVVIIDDSVRVWPHNKLNLIVVERYI 730
            SGRVISRGDDGEPFDSDDR PK+KDLEGVLGMES VVIIDDSVRVWPHNKLNLIVVERYI
Sbjct: 1020 SGRVISRGDDGEPFDSDDRVPKSKDLEGVLGMESAVVIIDDSVRVWPHNKLNLIVVERYI 1079

Query: 729  YFPCSGRQFGLPGPSLLEIDHDERAEDGTLAACLTVIERIHEIFFGHESLDEGDVRNILA 550
            YFPCS RQFGLPGPSLLEIDHDER EDGTLA+ L VI+RIHE FF H+SLDE DVRNILA
Sbjct: 1080 YFPCSRRQFGLPGPSLLEIDHDERPEDGTLASSLAVIQRIHENFFAHQSLDEADVRNILA 1139

Query: 549  CEQRKILAGCRIVFSRVFPVGEAKPHMHPLWQTAEQFGAVCTNQIDDQVTHVVANSLGTD 370
             EQRKILAGCRIVFSRVFPVGEA PHMHPLWQTAEQFGAVC NQID+QVTHVVANSLGTD
Sbjct: 1140 SEQRKILAGCRIVFSRVFPVGEANPHMHPLWQTAEQFGAVCINQIDEQVTHVVANSLGTD 1199

Query: 369  KVNWALSTGRFVVHPGWVEASALLYRRANEHDFAIKQQ 256
            KVNWALS GRFVVHPGWVEASALLYRRANEHDFAIKQQ
Sbjct: 1200 KVNWALSRGRFVVHPGWVEASALLYRRANEHDFAIKQQ 1237


>emb|CDP18969.1| unnamed protein product [Coffea canephora]
          Length = 1210

 Score =  809 bits (2089), Expect = 0.0
 Identities = 455/777 (58%), Positives = 538/777 (69%), Gaps = 42/777 (5%)
 Frame = -2

Query: 2466 NSLMSWQPVPSSTASMDTLSD-PENSNVSIVDPANNFRSPLL--------KSSSTRSRDP 2314
            +S M  +PV +S     T SD P+   ++    AN   +P L        K+SS +SRDP
Sbjct: 454  SSSMDVKPVDTSMVGQLTASDAPKIGILTGQGLANLLNAPSLSSGPSSSMKTSSAKSRDP 513

Query: 2313 RLRLADSDVGPRNLNQGLPSIGSDESKSMFAGVMSSRKQKIVEELVLDGPALKRRKNELS 2134
            RLRLA+SDV   +L++ LP +  +       G++SSRKQK +EE V+DGPALKR++NE +
Sbjct: 514  RLRLANSDVA--SLDRLLPVVNGEPKVEPVGGMISSRKQKTIEEQVMDGPALKRQRNEQT 571

Query: 2133 GPDTTLPLVT-----------------AISASQVAIPTPSFPVS-NYIKSPLTSQT---- 2020
                   + T                 A + S     + + P+   Y  +PL+S +    
Sbjct: 572  DSSVVKSVQTVSGTGGWLEDRGTAGLGATNRSHALNSSGNDPMRPEYAVTPLSSGSSLAN 631

Query: 2019 ------ETLPVKXXXXXXXXXXXLRDIVGNPSMLMSLLKMEHQKSSGDNNSATQMPNTNS 1858
                  + LP+            L+DI  NPS+ M+++KME QKS+    S +Q   +NS
Sbjct: 632  VTVNGNKNLPLTNPGATASLHSLLKDIAVNPSIWMNIIKMEQQKSADPTRSTSQPTCSNS 691

Query: 1857 ILGVAPSTSGVLPFSSLLGQKPAGI--VPCQTVSAEEPGKVRMKPRDPRRILHNNAPQKG 1684
            I G   S + V+     LGQ+ AG   V  QT S  EPGKVRMKPRDPRR+LHNN  QKG
Sbjct: 692  ING---SVNAVVSKPRDLGQRAAGTFQVTSQTASVAEPGKVRMKPRDPRRVLHNNTLQKG 748

Query: 1683 VTTVSDQPKTTASSCS--VMMGNSSAQGQENQKEK-LVPSSCAKPPDITMQFTNNLRNIA 1513
             +   DQ +T +S+ S   M+GN + Q Q++Q ++ +VPS+    PDI  QFT NL+NIA
Sbjct: 749  GSMEFDQSQTKSSTSSNPEMVGNINFQIQDDQLDRRVVPSNSIVQPDIAQQFTKNLKNIA 808

Query: 1512 DIMSISQACIPSSILPQCVSSQPLQGHQVGTETKIVANESVNFRSGSNSTSEAATSAPPR 1333
            DI+S+SQA      LPQ   SQP Q +Q  TET I   ES   +SG   +S+  +    R
Sbjct: 809  DIVSVSQATSSQPALPQISLSQPSQAYQGRTET-IGMLESGKPQSGPGLSSKEVSMGSSR 867

Query: 1332 PLNAHAWSDVEHLFDGFDDHQKVAIQRERARRLEEQNKLFAAGKXXXXXXXXXXXLNSAK 1153
            P N   W DVEHLF+GFDD QK AI RERARR++EQ K+FA  K                
Sbjct: 868  PQNN--WDDVEHLFEGFDDQQKAAIHRERARRMQEQRKMFAGRKLCL------------- 912

Query: 1152 FVEVDPLHDEMLRKKEEQDREKPQRHLFRFPHMGMWTKLRPGIWNFLEKASKLYELHLYT 973
            FVEVDP+HDE+LRKKEEQDREKP RHLFRFPHMGMWTKLRPGIWNFLEKASKLYELHLYT
Sbjct: 913  FVEVDPMHDEILRKKEEQDREKPHRHLFRFPHMGMWTKLRPGIWNFLEKASKLYELHLYT 972

Query: 972  MGNKYYATEMAKLLDPKGELFSGRVISRGDDGEPFDSDDRAPKNKDLEGVLGMESGVVII 793
            MGNK YATEMAKLLDPKGELF+GRVISRGDDG+  D D+R PK+KDLEGV+GMES VVII
Sbjct: 973  MGNKLYATEMAKLLDPKGELFAGRVISRGDDGDLLDGDERVPKSKDLEGVMGMESSVVII 1032

Query: 792  DDSVRVWPHNKLNLIVVERYIYFPCSGRQFGLPGPSLLEIDHDERAEDGTLAACLTVIER 613
            DDS+RVWPHNKLNLIVVERYI+FPCS RQFGLPGPSLLEIDHDER+EDGTLA+ L VIER
Sbjct: 1033 DDSLRVWPHNKLNLIVVERYIFFPCSRRQFGLPGPSLLEIDHDERSEDGTLASSLAVIER 1092

Query: 612  IHEIFFGHESLDEGDVRNILACEQRKILAGCRIVFSRVFPVGEAKPHMHPLWQTAEQFGA 433
            IHEIFF H+SLDE DVRNILA EQRKILAGCRIVFSRVFPVGEA PH+HPLWQTAEQFGA
Sbjct: 1093 IHEIFFAHQSLDEADVRNILASEQRKILAGCRIVFSRVFPVGEANPHLHPLWQTAEQFGA 1152

Query: 432  VCTNQIDDQVTHVVANSLGTDKVNWALSTGRFVVHPGWVEASALLYRRANEHDFAIK 262
            VCTN ID+QVTHVVANSLGTDKVNWALS+GRFVVHPGWVEASALLYRRANE DFAIK
Sbjct: 1153 VCTNSIDEQVTHVVANSLGTDKVNWALSSGRFVVHPGWVEASALLYRRANEKDFAIK 1209


>emb|CBI35661.3| unnamed protein product [Vitis vinifera]
          Length = 1184

 Score =  800 bits (2067), Expect = 0.0
 Identities = 448/769 (58%), Positives = 523/769 (68%), Gaps = 10/769 (1%)
 Frame = -2

Query: 2538 DNYGDXXXXXXXXXXXSHNVNAAVNSLMSWQPVPSSTASMDTLSD---PENSNVSIVDPA 2368
            D YGD           S  + A   +L    P+ SS   MD +     P N+       A
Sbjct: 449  DTYGDISGEVSSSSTISAPITANAPAL--GHPIVSSAPQMDIVQGLVVPRNTG------A 500

Query: 2367 NNFRSPLLKSSSTRSRDPRLRLADSDVGPRNLNQG-LPSIGSDESKSMFAGVMSSRKQKI 2191
             N R   +  +S +SRDPRLRLA SD G  +LN+  LP++ +         ++SSRKQK 
Sbjct: 501  VNSRFNSILRASAKSRDPRLRLASSDAGSLDLNERPLPAVSNSPKVDPLGEIVSSRKQKS 560

Query: 2190 VEELVLDGPALKRRKNELSGPDTTLPLVTAISASQVAIPTPSFPVSNYIKSPLTSQTETL 2011
             EE +LDGP  KR++N L+ P T L   + ++ + +    P   V+           E L
Sbjct: 561  AEEPLLDGPVTKRQRNGLTSPATKLE--SKVTVTGIGCDKPYVTVNG---------NEHL 609

Query: 2010 PVKXXXXXXXXXXXLRDIVGNPSMLMSLLKMEHQKSSGDNNSATQMPNT-NSILGVAPST 1834
            PV            L+DI  NP++ M++     Q+ SGD    T +P T NSILGV P  
Sbjct: 610  PVVATSTTASLQSLLKDIAVNPAVWMNIFNKVEQQKSGDPAKNTVLPPTSNSILGVVPPA 669

Query: 1833 SGVLPFSSLLGQKPAGIVPCQTVSA----EEPGKVRMKPRDPRRILHNNAPQKGVTTVSD 1666
            S      S LGQKPAG +           +E GKVRMKPRDPRRILH N+ Q+  ++ S+
Sbjct: 670  SVAPLKPSALGQKPAGALQVPQTGPMNPQDESGKVRMKPRDPRRILHANSFQRSGSSGSE 729

Query: 1665 QPKTTASSCSVMMGNSSAQGQENQKE-KLVPSSCAKPPDITMQFTNNLRNIADIMSISQA 1489
            Q KT            +AQ QE+Q E K VPS    PPDI+ QFT NL+NIAD+MS SQA
Sbjct: 730  QFKT------------NAQKQEDQTETKSVPSHSVNPPDISQQFTKNLKNIADLMSASQA 777

Query: 1488 CIPSSILPQCVSSQPLQGHQVGTETKIVANESVNFRSGSNSTSEAATSAPPRPLNAHAWS 1309
               +   PQ +SSQ +Q +    + K   ++S +  + + S  E+A + PP+  N   W 
Sbjct: 778  SSMTPTFPQILSSQSVQVNTDRMDVKATVSDSGDQLTANGSKPESA-AGPPQSKNT--WG 834

Query: 1308 DVEHLFDGFDDHQKVAIQRERARRLEEQNKLFAAGKXXXXXXXXXXXLNSAKFVEVDPLH 1129
            DVEHLFDG+DD QK AIQRERARR+EEQ K+F+A K           LNSAKFVEVDP+H
Sbjct: 835  DVEHLFDGYDDQQKAAIQRERARRIEEQKKMFSARKLCLVLDLDHTLLNSAKFVEVDPVH 894

Query: 1128 DEMLRKKEEQDREKPQRHLFRFPHMGMWTKLRPGIWNFLEKASKLYELHLYTMGNKYYAT 949
            DE+LRKKEEQDREK QRHLFRFPHMGMWTKLRPGIWNFLEKASKLYELHLYTMGNK YAT
Sbjct: 895  DEILRKKEEQDREKSQRHLFRFPHMGMWTKLRPGIWNFLEKASKLYELHLYTMGNKLYAT 954

Query: 948  EMAKLLDPKGELFSGRVISRGDDGEPFDSDDRAPKNKDLEGVLGMESGVVIIDDSVRVWP 769
            EMAK+LDPKG LF+GRVIS+GDDG+  D D+R PK+KDLEGVLGMES VVIIDDSVRVWP
Sbjct: 955  EMAKVLDPKGVLFAGRVISKGDDGDVLDGDERVPKSKDLEGVLGMESAVVIIDDSVRVWP 1014

Query: 768  HNKLNLIVVERYIYFPCSGRQFGLPGPSLLEIDHDERAEDGTLAACLTVIERIHEIFFGH 589
            HNKLNLIVVERY YFPCS RQFGLPGPSLLEIDHDER EDGTLA+ L VIERIH+ FF +
Sbjct: 1015 HNKLNLIVVERYTYFPCSRRQFGLPGPSLLEIDHDERPEDGTLASSLAVIERIHQSFFSN 1074

Query: 588  ESLDEGDVRNILACEQRKILAGCRIVFSRVFPVGEAKPHMHPLWQTAEQFGAVCTNQIDD 409
             +LDE DVRNILA EQRKILAGCRIVFSRVFPVGEA PH+HPLWQTAE FGAVCTNQID+
Sbjct: 1075 RALDEVDVRNILASEQRKILAGCRIVFSRVFPVGEANPHLHPLWQTAESFGAVCTNQIDE 1134

Query: 408  QVTHVVANSLGTDKVNWALSTGRFVVHPGWVEASALLYRRANEHDFAIK 262
            QVTHVVANSLGTDKVNWALSTGRFVVHPGWVEASALLYRRANE DFAIK
Sbjct: 1135 QVTHVVANSLGTDKVNWALSTGRFVVHPGWVEASALLYRRANEQDFAIK 1183


>ref|XP_009803071.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 3
            [Nicotiana sylvestris] gi|698516385|ref|XP_009803072.1|
            PREDICTED: RNA polymerase II C-terminal domain
            phosphatase-like 3 [Nicotiana sylvestris]
          Length = 1241

 Score =  798 bits (2060), Expect = 0.0
 Identities = 438/779 (56%), Positives = 535/779 (68%), Gaps = 37/779 (4%)
 Frame = -2

Query: 2487 HNVNAAVNSLMSWQPVPSSTASMDTLSDPENSNVSIVDPANNFRSPLLKSSSTRSRDPRL 2308
            HN +  +N+  +WQP+ SS    + L+          DP +   +P L+SS+ +SRDPRL
Sbjct: 472  HNASV-LNASSTWQPIVSSVPPTNILAGQGLGTARNADPLSFLPNPSLRSSTAKSRDPRL 530

Query: 2307 RLADSDVGPRNLNQG-LPSIGSDESKSMFAGVMSSRKQKIVEELVLDGPALKRRKNELSG 2131
            RLA S+   +NL +  LP    D        ++ SRKQKIVE+   D P LKR+++E + 
Sbjct: 531  RLATSEAAAQNLTKKMLPIPNIDLKLEASLEMIGSRKQKIVEQPAFDAPLLKRQRSEQTD 590

Query: 2130 -------------------------PDTTLPLVTAISAS---QVAIPTPSFPVSNYIKSP 2035
                                     P T+   VT  S +   ++   T S   SN I S 
Sbjct: 591  SIIVSDVRPSTGNGGWLEHRGTVGLPITSSNYVTDSSDNDTRKLEQVTSSVSTSNTIPSV 650

Query: 2034 LTSQTETLPVKXXXXXXXXXXXLRDIVGNPSMLMSLLKMEHQKSSGDNNSATQMPNTNSI 1855
            + +    LP+             +DI  NPS+ M+++K+E QKS+  + + T   +++SI
Sbjct: 651  IVNADVNLPLTGTSANLHSLL--KDIAINPSIWMNIIKLEQQKSADASKTTTVASSSSSI 708

Query: 1854 LGVAPSTSGVLPFSSLLGQKPAGIV--PCQTVSAEEPGKVRMKPRDPRRILHNNAPQK-G 1684
            LG  PST+   P SS++GQ+  GI+  P QT +A+E  KVRMKPRDPRR+LHN A QK G
Sbjct: 709  LGAVPSTNVAAPKSSVIGQRSVGIIQTPTQTTAADEVAKVRMKPRDPRRVLHNTAVQKSG 768

Query: 1683 VTTVSDQPKTTASSCSVMMGNSSAQGQENQ---KEKLVPSSCAKPPDITMQFTNNLRNIA 1513
             +  +DQ KT  +    M+ +   Q  E+Q   K  ++PS+   PPDI  QFT NL+NIA
Sbjct: 769  NSGSADQCKTGVAGTQAMISSHCVQRPEDQLDRKSAVIPSTT--PPDIARQFTKNLKNIA 826

Query: 1512 DIMSISQACIPSSILPQCVSSQPLQGHQVGTETKIVANESVNFRSGSNSTSEAATS-APP 1336
            D++S+S    P+S  P   S  P Q  QV   +++  N +V+  S   + +  A+  APP
Sbjct: 827  DMISVS----PTSTSPSAASQTPAQHMQVHP-SRLEGNGAVSESSELLTDAGLASGKAPP 881

Query: 1335 RPLNAHA-WSDVEHLFDGFDDHQKVAIQRERARRLEEQNKLFAAGKXXXXXXXXXXXLNS 1159
              L   + W +VEHLF+G+ D Q+ +IQRER RRLEEQ K+F+  K           LNS
Sbjct: 882  GSLQLQSSWGNVEHLFEGYSDQQRASIQRERTRRLEEQKKMFSVRKLCLVLDLDHTLLNS 941

Query: 1158 AKFVEVDPLHDEMLRKKEEQDREKPQRHLFRFPHMGMWTKLRPGIWNFLEKASKLYELHL 979
            AKFVE+DP+H E+LRKKEEQDREKP +HLFRFPHMGMWTKLRPGIWNFLEKASKL+ELHL
Sbjct: 942  AKFVEIDPVHQEILRKKEEQDREKPYKHLFRFPHMGMWTKLRPGIWNFLEKASKLFELHL 1001

Query: 978  YTMGNKYYATEMAKLLDPKGELFSGRVISRGDDGEPFDSDDRAPKNKDLEGVLGMESGVV 799
            YTMGNK YATEMAKLLDPKG+LF+GRVISRGDDG+P D D+R PK+KDLEGVLGMES VV
Sbjct: 1002 YTMGNKLYATEMAKLLDPKGDLFAGRVISRGDDGDPLDGDERIPKSKDLEGVLGMESAVV 1061

Query: 798  IIDDSVRVWPHNKLNLIVVERYIYFPCSGRQFGLPGPSLLEIDHDERAEDGTLAACLTVI 619
            IIDDSVRVWPHNKLNLIVVERYIYFPCS RQFGLPGPSLLEIDHDER EDGTLA+CL VI
Sbjct: 1062 IIDDSVRVWPHNKLNLIVVERYIYFPCSRRQFGLPGPSLLEIDHDERPEDGTLASCLGVI 1121

Query: 618  ERIHEIFFGHESLDEGDVRNILACEQRKILAGCRIVFSRVFPVGEAKPHMHPLWQTAEQF 439
            +RIH+ FF H S+DE DVRNILA EQ+KILAGCRIVFSRVFPVGEA PH HPLWQTAEQF
Sbjct: 1122 QRIHQNFFEHRSIDEADVRNILATEQQKILAGCRIVFSRVFPVGEANPHFHPLWQTAEQF 1181

Query: 438  GAVCTNQIDDQVTHVVANSLGTDKVNWALSTGRFVVHPGWVEASALLYRRANEHDFAIK 262
            GAVC++QID+QVTHVVANSLGTDKVNWALSTGRFVVHPGWVEASALLYRRANEHDFAIK
Sbjct: 1182 GAVCSSQIDEQVTHVVANSLGTDKVNWALSTGRFVVHPGWVEASALLYRRANEHDFAIK 1240


>ref|XP_010656789.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 3
            isoform X3 [Vitis vinifera]
          Length = 1273

 Score =  795 bits (2052), Expect = 0.0
 Identities = 441/735 (60%), Positives = 511/735 (69%), Gaps = 32/735 (4%)
 Frame = -2

Query: 2370 ANNFRSPLLKSSSTRSRDPRLRLADSDVGPRNLNQG-LPSIGSDESKSMFAGVMSSRKQK 2194
            A N R   +  +S +SRDPRLRLA SD G  +LN+  LP++ +         ++SSRKQK
Sbjct: 553  AVNSRFNSILRASAKSRDPRLRLASSDAGSLDLNERPLPAVSNSPKVDPLGEIVSSRKQK 612

Query: 2193 IVEELVLDGPALKRRKNELSGPDTTLPLVTAISA------SQVAIP-----------TPS 2065
              EE +LDGP  KR++N L+ P T     T +++      S   IP           T +
Sbjct: 613  SAEEPLLDGPVTKRQRNGLTSPATVRDAQTVVASGGWLEDSNTVIPQMMNRNQLIENTGT 672

Query: 2064 FPVSNYIKSPLT-----------SQTETLPVKXXXXXXXXXXXLRDIVGNPSMLMSLLKM 1918
             P     K  +T           +  E LPV            L+DI  NP++ M++   
Sbjct: 673  DPKKLESKVTVTGIGCDKPYVTVNGNEHLPVVATSTTASLQSLLKDIAVNPAVWMNIFNK 732

Query: 1917 EHQKSSGDNNSATQMPNT-NSILGVAPSTSGVLPFSSLLGQKPAGIVPC-QTVSAEEPGK 1744
              Q+ SGD    T +P T NSILGV P  S      S LGQKPAG +   QT   +E GK
Sbjct: 733  VEQQKSGDPAKNTVLPPTSNSILGVVPPASVAPLKPSALGQKPAGALQVPQTGPMDESGK 792

Query: 1743 VRMKPRDPRRILHNNAPQKGVTTVSDQPKTTASSCSVMMGNSSAQGQENQKE-KLVPSSC 1567
            VRMKPRDPRRILH N+ Q+  ++ S+Q KT            +AQ QE+Q E K VPS  
Sbjct: 793  VRMKPRDPRRILHANSFQRSGSSGSEQFKT------------NAQKQEDQTETKSVPSHS 840

Query: 1566 AKPPDITMQFTNNLRNIADIMSISQACIPSSILPQCVSSQPLQGHQVGTETKIVANESVN 1387
              PPDI+ QFT NL+NIAD+MS SQA   +   PQ +SSQ +Q +    + K   ++S +
Sbjct: 841  VNPPDISQQFTKNLKNIADLMSASQASSMTPTFPQILSSQSVQVNTDRMDVKATVSDSGD 900

Query: 1386 FRSGSNSTSEAATSAPPRPLNAHAWSDVEHLFDGFDDHQKVAIQRERARRLEEQNKLFAA 1207
              + + S  E+A + PP+  N   W DVEHLFDG+DD QK AIQRERARR+EEQ K+F+A
Sbjct: 901  QLTANGSKPESA-AGPPQSKNT--WGDVEHLFDGYDDQQKAAIQRERARRIEEQKKMFSA 957

Query: 1206 GKXXXXXXXXXXXLNSAKFVEVDPLHDEMLRKKEEQDREKPQRHLFRFPHMGMWTKLRPG 1027
             K           LNSAKFVEVDP+HDE+LRKKEEQDREK QRHLFRFPHMGMWTKLRPG
Sbjct: 958  RKLCLVLDLDHTLLNSAKFVEVDPVHDEILRKKEEQDREKSQRHLFRFPHMGMWTKLRPG 1017

Query: 1026 IWNFLEKASKLYELHLYTMGNKYYATEMAKLLDPKGELFSGRVISRGDDGEPFDSDDRAP 847
            IWNFLEKASKLYELHLYTMGNK YATEMAK+LDPKG LF+GRVIS+GDDG+  D D+R P
Sbjct: 1018 IWNFLEKASKLYELHLYTMGNKLYATEMAKVLDPKGVLFAGRVISKGDDGDVLDGDERVP 1077

Query: 846  KNKDLEGVLGMESGVVIIDDSVRVWPHNKLNLIVVERYIYFPCSGRQFGLPGPSLLEIDH 667
            K+KDLEGVLGMES VVIIDDSVRVWPHNKLNLIVVERY YFPCS RQFGLPGPSLLEIDH
Sbjct: 1078 KSKDLEGVLGMESAVVIIDDSVRVWPHNKLNLIVVERYTYFPCSRRQFGLPGPSLLEIDH 1137

Query: 666  DERAEDGTLAACLTVIERIHEIFFGHESLDEGDVRNILACEQRKILAGCRIVFSRVFPVG 487
            DER EDGTLA+ L VIERIH+ FF + +LDE DVRNILA EQRKILAGCRIVFSRVFPVG
Sbjct: 1138 DERPEDGTLASSLAVIERIHQSFFSNRALDEVDVRNILASEQRKILAGCRIVFSRVFPVG 1197

Query: 486  EAKPHMHPLWQTAEQFGAVCTNQIDDQVTHVVANSLGTDKVNWALSTGRFVVHPGWVEAS 307
            EA PH+HPLWQTAE FGAVCTNQID+QVTHVVANSLGTDKVNWALSTGRFVVHPGWVEAS
Sbjct: 1198 EANPHLHPLWQTAESFGAVCTNQIDEQVTHVVANSLGTDKVNWALSTGRFVVHPGWVEAS 1257

Query: 306  ALLYRRANEHDFAIK 262
            ALLYRRANE DFAIK
Sbjct: 1258 ALLYRRANEQDFAIK 1272


>ref|XP_012831646.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 3
            isoform X2 [Erythranthe guttatus]
          Length = 1112

 Score =  731 bits (1886), Expect(2) = 0.0
 Identities = 393/591 (66%), Positives = 453/591 (76%), Gaps = 4/591 (0%)
 Frame = -2

Query: 2487 HNVNAAVNSLMSWQPVPSSTASMDTLSDPENSNVSIVDPANNFRSPLLKSSSTRSRDPRL 2308
            H+VN AVN L S QPV SS+ +MDT + PE SN        + R+P+LKS+S +SRDPRL
Sbjct: 490  HHVNPAVNILTSVQPVVSSSVAMDTSATPEISN--------SLRNPVLKSTSAKSRDPRL 541

Query: 2307 RLADSDVGPRNLNQGLPSIGSDESKSMFAGVMSSRKQKIVEELVLDGPALKRRKNELSGP 2128
            RL++SD G +N N+ L ++GS+ESK   +G++SSRKQK  EELVL+GPALKR++NELSGP
Sbjct: 542  RLSNSDAGAKNPNKSLSAVGSEESKWESSGMVSSRKQKTNEELVLNGPALKRQRNELSGP 601

Query: 2127 DTTLPLVTAISASQVAIPTPSFPVSNYIKSPLTSQTETLPVKXXXXXXXXXXXLRDIVGN 1948
             T +PLV+A S SQ+ +P     VS  I S LTSQ+E  P K           L+DI  +
Sbjct: 602  STAMPLVSATSTSQMTLP-----VSAPIMSLLTSQSEKFPSKNSNATSSLHSLLKDIAVD 656

Query: 1947 PSMLMSLLKMEHQKSSGDNNSATQMPNTNSILGVAPSTSGVLPFSSLLGQKPAGIV--PC 1774
            PS+ M++LKME+ KSS D  S TQ+ N+NS+LG  PS  GV+P SS +GQ  AG V  P 
Sbjct: 657  PSIWMNILKMENLKSSDDIKSMTQISNSNSVLGAVPSPVGVMPLSSTIGQISAGTVQIPS 716

Query: 1773 QTVSAEEPGKVRMKPRDPRRILHNNAPQKGVTTVSDQPKTTASSCSVMMGNSSAQGQENQ 1594
            Q VS EE GKVRMKPRDPRR+LHNNAPQK VT+V+DQPK  AS  S M    +   QE+Q
Sbjct: 717  QAVSVEESGKVRMKPRDPRRVLHNNAPQKDVTSVADQPKADASFGSAM----NTPKQEDQ 772

Query: 1593 KEKLVPSSCAKPPDITMQFTNNLRNIADIMSISQACIPSSILPQCVSSQPLQGHQV-GTE 1417
             E  + SS  KPPDITMQFTNNLRNIAD++S+SQ C  S +L Q  S QP QG  + G E
Sbjct: 773  LENKMSSSSMKPPDITMQFTNNLRNIADLLSVSQICTTSPVLAQIPSLQPAQGDLIAGKE 832

Query: 1416 TKIVANESVNFRSGSN-STSEAATSAPPRPLNAHAWSDVEHLFDGFDDHQKVAIQRERAR 1240
            T+    E  N R+ ++ +TSEAATS+PPRPLNA+AWSDVEHLF+GFDD QKVAIQRERAR
Sbjct: 833  TRGPIAEYGNIRNVTDITTSEAATSSPPRPLNANAWSDVEHLFEGFDDQQKVAIQRERAR 892

Query: 1239 RLEEQNKLFAAGKXXXXXXXXXXXLNSAKFVEVDPLHDEMLRKKEEQDREKPQRHLFRFP 1060
            RLEEQNKLFA  K           LNSAKFVEVDP HDEMLRKKEEQDREKP RHLFRFP
Sbjct: 893  RLEEQNKLFAVRKLCLVLDLDHTLLNSAKFVEVDPQHDEMLRKKEEQDREKPHRHLFRFP 952

Query: 1059 HMGMWTKLRPGIWNFLEKASKLYELHLYTMGNKYYATEMAKLLDPKGELFSGRVISRGDD 880
            HMGMWTKLRPG+WNFLEKASKLYELHLYTMGNKYYATEMAKLLDPKGELFSGRVISRGDD
Sbjct: 953  HMGMWTKLRPGVWNFLEKASKLYELHLYTMGNKYYATEMAKLLDPKGELFSGRVISRGDD 1012

Query: 879  GEPFDSDDRAPKNKDLEGVLGMESGVVIIDDSVRVWPHNKLNLIVVERYIY 727
            GEPFDSDDRAPK+KDLEGVLGMESGVVIIDDS+RVWPHNKLNLIVVERYIY
Sbjct: 1013 GEPFDSDDRAPKSKDLEGVLGMESGVVIIDDSIRVWPHNKLNLIVVERYIY 1063



 Score = 86.3 bits (212), Expect(2) = 0.0
 Identities = 42/51 (82%), Positives = 45/51 (88%)
 Frame = -3

Query: 734  IYIFPVVDGNLGYQVLPFLRLIMMREPKMGLWLLV*RLLREYMRYFLGMSH 582
            IYIF VVDGNL YQVLPFLRLI MR+ KMGLWLLV RLL+EYM+ FLGMSH
Sbjct: 1062 IYIFHVVDGNLDYQVLPFLRLITMRDQKMGLWLLVRRLLKEYMKTFLGMSH 1112


>ref|XP_010656786.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 3
            isoform X2 [Vitis vinifera]
          Length = 1276

 Score =  790 bits (2041), Expect = 0.0
 Identities = 439/738 (59%), Positives = 509/738 (68%), Gaps = 35/738 (4%)
 Frame = -2

Query: 2370 ANNFRSPLLKSSSTRSRDPRLRLADSDVGPRNLNQG-LPSIGSDESKSMFAGVMSSRKQK 2194
            A N R   +  +S +SRDPRLRLA SD G  +LN+  LP++ +         ++SSRKQK
Sbjct: 553  AVNSRFNSILRASAKSRDPRLRLASSDAGSLDLNERPLPAVSNSPKVDPLGEIVSSRKQK 612

Query: 2193 IVEELVLDGPALKRRKNELSGPDTTLPLVTAISA------SQVAIP-----------TPS 2065
              EE +LDGP  KR++N L+ P T     T +++      S   IP           T +
Sbjct: 613  SAEEPLLDGPVTKRQRNGLTSPATVRDAQTVVASGGWLEDSNTVIPQMMNRNQLIENTGT 672

Query: 2064 FPVSNYIKSPLT-----------SQTETLPVKXXXXXXXXXXXLRDIVGNPSMLMSLLKM 1918
             P     K  +T           +  E LPV            L+DI  NP++ M++   
Sbjct: 673  DPKKLESKVTVTGIGCDKPYVTVNGNEHLPVVATSTTASLQSLLKDIAVNPAVWMNIFNK 732

Query: 1917 EHQKSSGDNNSATQMPNT-NSILGVAPSTSGVLPFSSLLGQKPAGIVPCQTVSA----EE 1753
              Q+ SGD    T +P T NSILGV P  S      S LGQKPAG +           +E
Sbjct: 733  VEQQKSGDPAKNTVLPPTSNSILGVVPPASVAPLKPSALGQKPAGALQVPQTGPMNPQDE 792

Query: 1752 PGKVRMKPRDPRRILHNNAPQKGVTTVSDQPKTTASSCSVMMGNSSAQGQENQKE-KLVP 1576
             GKVRMKPRDPRRILH N+ Q+  ++ S+Q KT            +AQ QE+Q E K VP
Sbjct: 793  SGKVRMKPRDPRRILHANSFQRSGSSGSEQFKT------------NAQKQEDQTETKSVP 840

Query: 1575 SSCAKPPDITMQFTNNLRNIADIMSISQACIPSSILPQCVSSQPLQGHQVGTETKIVANE 1396
            S    PPDI+ QFT NL+NIAD+MS SQA   +   PQ +SSQ +Q +    + K   ++
Sbjct: 841  SHSVNPPDISQQFTKNLKNIADLMSASQASSMTPTFPQILSSQSVQVNTDRMDVKATVSD 900

Query: 1395 SVNFRSGSNSTSEAATSAPPRPLNAHAWSDVEHLFDGFDDHQKVAIQRERARRLEEQNKL 1216
            S +  + + S  E+A + PP+  N   W DVEHLFDG+DD QK AIQRERARR+EEQ K+
Sbjct: 901  SGDQLTANGSKPESA-AGPPQSKNT--WGDVEHLFDGYDDQQKAAIQRERARRIEEQKKM 957

Query: 1215 FAAGKXXXXXXXXXXXLNSAKFVEVDPLHDEMLRKKEEQDREKPQRHLFRFPHMGMWTKL 1036
            F+A K           LNSAKFVEVDP+HDE+LRKKEEQDREK QRHLFRFPHMGMWTKL
Sbjct: 958  FSARKLCLVLDLDHTLLNSAKFVEVDPVHDEILRKKEEQDREKSQRHLFRFPHMGMWTKL 1017

Query: 1035 RPGIWNFLEKASKLYELHLYTMGNKYYATEMAKLLDPKGELFSGRVISRGDDGEPFDSDD 856
            RPGIWNFLEKASKLYELHLYTMGNK YATEMAK+LDPKG LF+GRVIS+GDDG+  D D+
Sbjct: 1018 RPGIWNFLEKASKLYELHLYTMGNKLYATEMAKVLDPKGVLFAGRVISKGDDGDVLDGDE 1077

Query: 855  RAPKNKDLEGVLGMESGVVIIDDSVRVWPHNKLNLIVVERYIYFPCSGRQFGLPGPSLLE 676
            R PK+KDLEGVLGMES VVIIDDSVRVWPHNKLNLIVVERY YFPCS RQFGLPGPSLLE
Sbjct: 1078 RVPKSKDLEGVLGMESAVVIIDDSVRVWPHNKLNLIVVERYTYFPCSRRQFGLPGPSLLE 1137

Query: 675  IDHDERAEDGTLAACLTVIERIHEIFFGHESLDEGDVRNILACEQRKILAGCRIVFSRVF 496
            IDHDER EDGTLA+ L VIERIH+ FF + +LDE DVRNILA EQRKILAGCRIVFSRVF
Sbjct: 1138 IDHDERPEDGTLASSLAVIERIHQSFFSNRALDEVDVRNILASEQRKILAGCRIVFSRVF 1197

Query: 495  PVGEAKPHMHPLWQTAEQFGAVCTNQIDDQVTHVVANSLGTDKVNWALSTGRFVVHPGWV 316
            PVGEA PH+HPLWQTAE FGAVCTNQID+QVTHVVANSLGTDKVNWALSTGRFVVHPGWV
Sbjct: 1198 PVGEANPHLHPLWQTAESFGAVCTNQIDEQVTHVVANSLGTDKVNWALSTGRFVVHPGWV 1257

Query: 315  EASALLYRRANEHDFAIK 262
            EASALLYRRANE DFAIK
Sbjct: 1258 EASALLYRRANEQDFAIK 1275


>ref|XP_010656784.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 3
            isoform X1 [Vitis vinifera]
          Length = 1285

 Score =  788 bits (2036), Expect = 0.0
 Identities = 440/747 (58%), Positives = 510/747 (68%), Gaps = 44/747 (5%)
 Frame = -2

Query: 2370 ANNFRSPLLKSSSTRSRDPRLRLADSDVGPRNLNQG-LPSIGSDESKSMFAGVMSSRKQK 2194
            A N R   +  +S +SRDPRLRLA SD G  +LN+  LP++ +         ++SSRKQK
Sbjct: 553  AVNSRFNSILRASAKSRDPRLRLASSDAGSLDLNERPLPAVSNSPKVDPLGEIVSSRKQK 612

Query: 2193 IVEELVLDGPALKRRKNELSGPDTTLPLVTAISA------SQVAIP-----------TPS 2065
              EE +LDGP  KR++N L+ P T     T +++      S   IP           T +
Sbjct: 613  SAEEPLLDGPVTKRQRNGLTSPATVRDAQTVVASGGWLEDSNTVIPQMMNRNQLIENTGT 672

Query: 2064 FPVSNYIKSPLT-----------SQTETLPVKXXXXXXXXXXXLRDIVGNPSMLMSLLKM 1918
             P     K  +T           +  E LPV            L+DI  NP++ M++   
Sbjct: 673  DPKKLESKVTVTGIGCDKPYVTVNGNEHLPVVATSTTASLQSLLKDIAVNPAVWMNIFNK 732

Query: 1917 EHQKSSGDNNSATQMPNT-NSILGVAPSTSGVLPFSSLLGQKPAG-----------IVPC 1774
              Q+ SGD    T +P T NSILGV P  S      S LGQKPAG           +  C
Sbjct: 733  VEQQKSGDPAKNTVLPPTSNSILGVVPPASVAPLKPSALGQKPAGALQVPQTGPMLVTSC 792

Query: 1773 QTVS--AEEPGKVRMKPRDPRRILHNNAPQKGVTTVSDQPKTTASSCSVMMGNSSAQGQE 1600
                   +E GKVRMKPRDPRRILH N+ Q+  ++ S+Q KT            +AQ QE
Sbjct: 793  NNAQNPQDESGKVRMKPRDPRRILHANSFQRSGSSGSEQFKT------------NAQKQE 840

Query: 1599 NQKE-KLVPSSCAKPPDITMQFTNNLRNIADIMSISQACIPSSILPQCVSSQPLQGHQVG 1423
            +Q E K VPS    PPDI+ QFT NL+NIAD+MS SQA   +   PQ +SSQ +Q +   
Sbjct: 841  DQTETKSVPSHSVNPPDISQQFTKNLKNIADLMSASQASSMTPTFPQILSSQSVQVNTDR 900

Query: 1422 TETKIVANESVNFRSGSNSTSEAATSAPPRPLNAHAWSDVEHLFDGFDDHQKVAIQRERA 1243
             + K   ++S +  + + S  E+A + PP+  N   W DVEHLFDG+DD QK AIQRERA
Sbjct: 901  MDVKATVSDSGDQLTANGSKPESA-AGPPQSKNT--WGDVEHLFDGYDDQQKAAIQRERA 957

Query: 1242 RRLEEQNKLFAAGKXXXXXXXXXXXLNSAKFVEVDPLHDEMLRKKEEQDREKPQRHLFRF 1063
            RR+EEQ K+F+A K           LNSAKFVEVDP+HDE+LRKKEEQDREK QRHLFRF
Sbjct: 958  RRIEEQKKMFSARKLCLVLDLDHTLLNSAKFVEVDPVHDEILRKKEEQDREKSQRHLFRF 1017

Query: 1062 PHMGMWTKLRPGIWNFLEKASKLYELHLYTMGNKYYATEMAKLLDPKGELFSGRVISRGD 883
            PHMGMWTKLRPGIWNFLEKASKLYELHLYTMGNK YATEMAK+LDPKG LF+GRVIS+GD
Sbjct: 1018 PHMGMWTKLRPGIWNFLEKASKLYELHLYTMGNKLYATEMAKVLDPKGVLFAGRVISKGD 1077

Query: 882  DGEPFDSDDRAPKNKDLEGVLGMESGVVIIDDSVRVWPHNKLNLIVVERYIYFPCSGRQF 703
            DG+  D D+R PK+KDLEGVLGMES VVIIDDSVRVWPHNKLNLIVVERY YFPCS RQF
Sbjct: 1078 DGDVLDGDERVPKSKDLEGVLGMESAVVIIDDSVRVWPHNKLNLIVVERYTYFPCSRRQF 1137

Query: 702  GLPGPSLLEIDHDERAEDGTLAACLTVIERIHEIFFGHESLDEGDVRNILACEQRKILAG 523
            GLPGPSLLEIDHDER EDGTLA+ L VIERIH+ FF + +LDE DVRNILA EQRKILAG
Sbjct: 1138 GLPGPSLLEIDHDERPEDGTLASSLAVIERIHQSFFSNRALDEVDVRNILASEQRKILAG 1197

Query: 522  CRIVFSRVFPVGEAKPHMHPLWQTAEQFGAVCTNQIDDQVTHVVANSLGTDKVNWALSTG 343
            CRIVFSRVFPVGEA PH+HPLWQTAE FGAVCTNQID+QVTHVVANSLGTDKVNWALSTG
Sbjct: 1198 CRIVFSRVFPVGEANPHLHPLWQTAESFGAVCTNQIDEQVTHVVANSLGTDKVNWALSTG 1257

Query: 342  RFVVHPGWVEASALLYRRANEHDFAIK 262
            RFVVHPGWVEASALLYRRANE DFAIK
Sbjct: 1258 RFVVHPGWVEASALLYRRANEQDFAIK 1284


>ref|XP_006341905.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
            3-like [Solanum tuberosum]
          Length = 1218

 Score =  788 bits (2035), Expect = 0.0
 Identities = 435/774 (56%), Positives = 514/774 (66%), Gaps = 32/774 (4%)
 Frame = -2

Query: 2487 HNVNAAVNSLMSWQPVPSSTASMDTLSDPENSNVSIVDPANNFRSPLLKSSSTRSRDPRL 2308
            HN +    S M  QP+ SS    + L           DP +   +P L+SS+ +SRDPRL
Sbjct: 451  HNASHLNESSMG-QPILSSVPQTNILDGQGLGTARTADPLSFLPNPSLRSSTAKSRDPRL 509

Query: 2307 RLADSDVGPRNLNQG-LPSIGSDESKSMFAGVMSSRKQKIVEELVLDGPALKRRKNELSG 2131
            RLA SD   +N N+  LP    D        ++ S+KQK V+  V   P  KR+++E + 
Sbjct: 510  RLATSDAVAQNTNKNILPIPDIDLKLEASLEMIGSKKQKTVDLPVFGAPLPKRQRSEQTD 569

Query: 2130 -------------------------PDTTLPLVTAISASQVAIPTPSFPVSNYIKSPLTS 2026
                                     P T+    T  S + +            I S + +
Sbjct: 570  SIIVSDVRPSTGNGGWLEDRGTAGLPITSSNCATDSSDNDIRKLEQVTATIATIPSVIVN 629

Query: 2025 QTETLPVKXXXXXXXXXXXLRDIVGNPSMLMSLLKMEHQKSSGDNNSAT-QMPNTNSILG 1849
              E  PV            L+DI  NPS+ M+++KME QKS+  + + T Q  ++ SILG
Sbjct: 630  AAENFPVTGISTSTTLHSLLKDIAINPSIWMNIIKMEQQKSADASRTTTAQASSSKSILG 689

Query: 1848 VAPSTSGVLPFSSLLGQKPAGIV--PCQTVSAEEPGKVRMKPRDPRRILHNNAPQKGVTT 1675
              PST  + P SS +GQ+  GI+  P  T SA+E   VRMKPRDPRR+LHN A  KG   
Sbjct: 690  AVPSTDAIAPRSSAIGQRSVGILQTPTHTASADEVAIVRMKPRDPRRVLHNTAVLKGGNV 749

Query: 1674 VSDQPKTTASSCSVMMGNSSAQGQENQKE-KLVPSSCAKPPDITMQFTNNLRNIADIMSI 1498
             SDQ KT  +     + N   Q QE+Q + K   +    PPDI  QFT NL+NIAD++S+
Sbjct: 750  GSDQCKTGVAGTHATISNLGFQSQEDQLDRKSAVTLSTTPPDIARQFTKNLKNIADMISV 809

Query: 1497 SQACIPSSILPQCVSSQP--LQGHQVGTETKIVANESVNFRSGSNSTSEAATSAPPRPLN 1324
            S    PS+ L     +Q   LQ HQ  +E K   +E     + +   SE  +    +P  
Sbjct: 810  S----PSTSLSAASQTQTQCLQSHQSRSEGKEAVSEPSERVNDAGLASEKGSPGSLQP-- 863

Query: 1323 AHAWSDVEHLFDGFDDHQKVAIQRERARRLEEQNKLFAAGKXXXXXXXXXXXLNSAKFVE 1144
              +W DVEHLF+G+ D Q+  IQRERARRLEEQ K+F+  K           LNSAKFVE
Sbjct: 864  QISWGDVEHLFEGYSDQQRADIQRERARRLEEQKKMFSVRKLCLVLDLDHTLLNSAKFVE 923

Query: 1143 VDPLHDEMLRKKEEQDREKPQRHLFRFPHMGMWTKLRPGIWNFLEKASKLYELHLYTMGN 964
            +DP+H+E+LRKKEEQDREKP RHLFRFPHMGMWTKLRPGIWNFLEKAS L+ELHLYTMGN
Sbjct: 924  IDPVHEEILRKKEEQDREKPCRHLFRFPHMGMWTKLRPGIWNFLEKASNLFELHLYTMGN 983

Query: 963  KYYATEMAKLLDPKGELFSGRVISRGDDGEPFDSDDRAPKNKDLEGVLGMESGVVIIDDS 784
            K YATEMAKLLDPKG+LF+GRVISRGDDG+PFD D+R PK+KDLEGVLGMES VVIIDDS
Sbjct: 984  KLYATEMAKLLDPKGDLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGMESAVVIIDDS 1043

Query: 783  VRVWPHNKLNLIVVERYIYFPCSGRQFGLPGPSLLEIDHDERAEDGTLAACLTVIERIHE 604
            VRVWPHNKLNLIVVERYIYFPCS RQFGLPGPSLLEIDHDER EDGTLA+CL VI+RIH+
Sbjct: 1044 VRVWPHNKLNLIVVERYIYFPCSRRQFGLPGPSLLEIDHDERPEDGTLASCLGVIQRIHQ 1103

Query: 603  IFFGHESLDEGDVRNILACEQRKILAGCRIVFSRVFPVGEAKPHMHPLWQTAEQFGAVCT 424
             FF H S+DE DVRNILA EQ+KILAGCRIVFSRVFPVGEA PH+HPLWQTAEQFGAVCT
Sbjct: 1104 NFFAHRSIDEADVRNILATEQKKILAGCRIVFSRVFPVGEANPHLHPLWQTAEQFGAVCT 1163

Query: 423  NQIDDQVTHVVANSLGTDKVNWALSTGRFVVHPGWVEASALLYRRANEHDFAIK 262
            +QIDDQVTHVVANSLGTDKVNWALSTGRFVVHPGWVEASALLYRRANEHDFAIK
Sbjct: 1164 SQIDDQVTHVVANSLGTDKVNWALSTGRFVVHPGWVEASALLYRRANEHDFAIK 1217


>ref|XP_009627456.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 3
            [Nicotiana tomentosiformis]
            gi|697093792|ref|XP_009627526.1| PREDICTED: RNA
            polymerase II C-terminal domain phosphatase-like 3
            [Nicotiana tomentosiformis]
          Length = 1236

 Score =  782 bits (2019), Expect = 0.0
 Identities = 432/779 (55%), Positives = 527/779 (67%), Gaps = 37/779 (4%)
 Frame = -2

Query: 2487 HNVNAAVNSLMSWQPVPSSTASMDTLSDPENSNVSIVDPANNFRSPLLKSSSTRSRDPRL 2308
            HN +  +N+  +W P+ SS    + L+          DP +   +P L+SS+ +SRDPRL
Sbjct: 467  HNASI-LNTSSTWLPIVSSVPPTNILAGQGLGTARNADPLSFLPNPSLRSSTAKSRDPRL 525

Query: 2307 RLADSDVGPRNLNQG-LPSIGSDESKSMFAGVMSSRKQKIVEELVLDGPALKRRKNELSG 2131
            RLA S+   +NLN   LP    D        ++ SRKQKI E+   D   LKR+++E + 
Sbjct: 526  RLATSEAAAQNLNMKMLPIPNIDLKLEASLEMIQSRKQKIAEQPAFDASLLKRQRSEQTD 585

Query: 2130 -------------------------PDTTLPLVTAISAS---QVAIPTPSFPVSNYIKSP 2035
                                     P T+   VT  S +   ++   T S   SN + S 
Sbjct: 586  SIIVSDVRPSTGNGGWLEHRGTAGLPITSSNYVTDSSGNGTRKLEQVTSSVSTSNTMPSV 645

Query: 2034 LTSQTETLPVKXXXXXXXXXXXLRDIVGNPSMLMSLLKMEHQKSSGDNNSATQMPNTNSI 1855
            + +    LP+             +DI  NPS+ M+++K+E QKS+ D+ + T   +++SI
Sbjct: 646  IVNADVNLPLTGTSANLHSLL--KDIAINPSIWMNIIKLEQQKSADDSKTTTLASSSSSI 703

Query: 1854 LGVAPSTSGVLPFSSLLGQKPAGIV--PCQTVSAEEPGKVRMKPRDPRRILHNNAPQK-G 1684
            LG  PST+     +S++GQ+  GI+  P QT +A+E  KVRMKPRDPRR+LHN A QK G
Sbjct: 704  LGAVPSTNVAASRTSMIGQRSVGIIQAPTQTAAADEVAKVRMKPRDPRRVLHNTAVQKSG 763

Query: 1683 VTTVSDQPKTTASSCSVMMGNSSAQGQENQ---KEKLVPSSCAKPPDITMQFTNNLRNIA 1513
                +DQ KT  +    M  +   Q  E+Q   K  + PS+   PPDI  QFT NL+NIA
Sbjct: 764  NVGSADQCKTGVAGTQAMTSSHCVQRPEDQLDRKSAVTPSTT--PPDIARQFTKNLKNIA 821

Query: 1512 DIMSISQACIPSSILPQCVSSQPLQGHQVGTETKIVANESVNFRSGSNSTSEAATS-APP 1336
            D++S+S    P+S  P   S  P Q  QV   +++  N +V+  S   + +  A+  APP
Sbjct: 822  DMISVS----PTSTSPAAASQTPTQHMQVHP-SRLEGNGAVSESSELLTDAGLASGKAPP 876

Query: 1335 RPLNAHA-WSDVEHLFDGFDDHQKVAIQRERARRLEEQNKLFAAGKXXXXXXXXXXXLNS 1159
              L   + W +VEHLF+G+ D Q+ +IQRER RRLEEQ K+F+  K           LNS
Sbjct: 877  DSLQPQSSWGNVEHLFEGYSDQQRASIQRERTRRLEEQKKMFSVRKLCLVLDLDHTLLNS 936

Query: 1158 AKFVEVDPLHDEMLRKKEEQDREKPQRHLFRFPHMGMWTKLRPGIWNFLEKASKLYELHL 979
            AKFVE+DP+H E+LRKKEEQDREKP RHLFRF HMGMWTKLRPGIWNFLEKASKL+ELHL
Sbjct: 937  AKFVEIDPVHQEILRKKEEQDREKPYRHLFRFLHMGMWTKLRPGIWNFLEKASKLFELHL 996

Query: 978  YTMGNKYYATEMAKLLDPKGELFSGRVISRGDDGEPFDSDDRAPKNKDLEGVLGMESGVV 799
            YTMGNK YATEMAKLLDPKG+LF+GRVISRGDDG+P D D+R PK+KDLEGVLGMES VV
Sbjct: 997  YTMGNKLYATEMAKLLDPKGDLFAGRVISRGDDGDPLDGDERIPKSKDLEGVLGMESAVV 1056

Query: 798  IIDDSVRVWPHNKLNLIVVERYIYFPCSGRQFGLPGPSLLEIDHDERAEDGTLAACLTVI 619
            IIDDSVRVWPHNKLNLIVVERYIYFPCS RQFGLPGPSLLEIDHDER EDGTLA+CL VI
Sbjct: 1057 IIDDSVRVWPHNKLNLIVVERYIYFPCSRRQFGLPGPSLLEIDHDERPEDGTLASCLGVI 1116

Query: 618  ERIHEIFFGHESLDEGDVRNILACEQRKILAGCRIVFSRVFPVGEAKPHMHPLWQTAEQF 439
            +RIH+ FF H S+DE DVRNILA EQ+KILAGCRIVFSRVFPVGEA PH+HPLWQTAEQF
Sbjct: 1117 QRIHQNFFEHRSIDEADVRNILATEQQKILAGCRIVFSRVFPVGEANPHLHPLWQTAEQF 1176

Query: 438  GAVCTNQIDDQVTHVVANSLGTDKVNWALSTGRFVVHPGWVEASALLYRRANEHDFAIK 262
            GAVC++QID+ VTHVVANSLGTDKVNWALSTGRFVVHPGWVEAS LLYRRANEHDFAIK
Sbjct: 1177 GAVCSSQIDELVTHVVANSLGTDKVNWALSTGRFVVHPGWVEASTLLYRRANEHDFAIK 1235


>ref|XP_004252660.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 3
            [Solanum lycopersicum]
          Length = 1211

 Score =  777 bits (2007), Expect = 0.0
 Identities = 430/775 (55%), Positives = 515/775 (66%), Gaps = 33/775 (4%)
 Frame = -2

Query: 2487 HNVNAAVNSLMSWQPVPSSTASMDTLSDPENSNVSIVDPANNFRSPLLKSSSTRSRDPRL 2308
            HN +    S M  QP+ SS    + L           DP +   +P L+SS+ +SRDPRL
Sbjct: 447  HNASHLNESSMG-QPILSSVPQTNILDGQGLGTTRTADPLSFLPNPSLRSSTAKSRDPRL 505

Query: 2307 RLADSDVGPRNLNQGLPSIGSDESKSMFAGVMSSRKQKIVEELVLDGPALKRRKNELSGP 2128
            RLA SD   +N    +P I      S+   ++ S+KQK V+    D P  KR+++E +  
Sbjct: 506  RLATSDTVAQNTILPIPDIDLKLEASL--EMIVSKKQKTVDLSAFDAPLPKRQRSEQTDS 563

Query: 2127 DTTLPLVTAIS-------ASQVAIPTPSFPVSNY------------------IKSPLTSQ 2023
                 +  +I             +P  S   + Y                  I S + + 
Sbjct: 564  IIVSDVRPSIGNGGWLEDRGTAELPITSSNCATYNSDNDIRKLEQVTATIATIPSVIVNA 623

Query: 2022 TETLPVKXXXXXXXXXXXLRDIVGNPSMLMSLLKMEHQKSSGDNNSAT-QMPNTNSILGV 1846
             E  PV            L+DI  NPS+ M+++K E QKS+  + + T Q  ++ SILG 
Sbjct: 624  AENFPVTGISTSTTLHSLLKDIAINPSIWMNIIKTEQQKSADASRTNTAQASSSKSILGA 683

Query: 1845 APSTSGVLPFSSLLGQKPAGIV--PCQTVSAEEPGKVRMKPRDPRRILHNNAPQKGVTTV 1672
             PST  V P SS +GQ+  GI+  P  T SA+E   VRMKPRDPRR+LH+ A  KG +  
Sbjct: 684  VPSTVAVAPRSSAIGQRSVGILQTPTHTASADEVAIVRMKPRDPRRVLHSTAVLKGGSVG 743

Query: 1671 SDQPKTTASSCSVMMGNSSAQGQENQKE-KLVPSSCAKPPDITMQFTNNLRNIADIMSIS 1495
             DQ KT  +     + N S Q QE+Q + K   +    PPDI  QFT NL+NIAD++S+S
Sbjct: 744  LDQCKTGVAGTHATISNLSFQSQEDQLDRKSAVTLSTTPPDIACQFTKNLKNIADMISVS 803

Query: 1494 QACIPSSILPQCVSSQP----LQGHQVGTETKIVANESVNFRSGSNSTSEAATSAPPRPL 1327
             +  PS      V+SQ     +Q +Q  +E K   +E   + + +   SE  +    +P 
Sbjct: 804  PSTSPS------VASQTQTLCIQAYQSRSEVKGAVSEPSEWVNDAGLASEKGSPGSLQP- 856

Query: 1326 NAHAWSDVEHLFDGFDDHQKVAIQRERARRLEEQNKLFAAGKXXXXXXXXXXXLNSAKFV 1147
               +W DVEHLF+G+ D Q+  IQRER RRLEEQ K+F+  K           LNSAKFV
Sbjct: 857  -QISWGDVEHLFEGYSDQQRADIQRERTRRLEEQKKMFSVRKLCLVLDLDHTLLNSAKFV 915

Query: 1146 EVDPLHDEMLRKKEEQDREKPQRHLFRFPHMGMWTKLRPGIWNFLEKASKLYELHLYTMG 967
            E+DP+H+E+LRKKEEQDREKP RHLFRFPHMGMWTKLRPGIWNFLEKAS L+ELHLYTMG
Sbjct: 916  EIDPVHEEILRKKEEQDREKPYRHLFRFPHMGMWTKLRPGIWNFLEKASNLFELHLYTMG 975

Query: 966  NKYYATEMAKLLDPKGELFSGRVISRGDDGEPFDSDDRAPKNKDLEGVLGMESGVVIIDD 787
            NK YATEMAKLLDPKG+LF+GRVISRGDDG+PFD D+R PK+KDLEGVLGMES VVIIDD
Sbjct: 976  NKLYATEMAKLLDPKGDLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGMESAVVIIDD 1035

Query: 786  SVRVWPHNKLNLIVVERYIYFPCSGRQFGLPGPSLLEIDHDERAEDGTLAACLTVIERIH 607
            SVRVWPHNKLNLIVVERYIYFPCS RQFGLPGPSLLEIDHDER EDGTLA+CL VI+RIH
Sbjct: 1036 SVRVWPHNKLNLIVVERYIYFPCSRRQFGLPGPSLLEIDHDERPEDGTLASCLGVIQRIH 1095

Query: 606  EIFFGHESLDEGDVRNILACEQRKILAGCRIVFSRVFPVGEAKPHMHPLWQTAEQFGAVC 427
            + FF H S+DE DVRNILA EQ+KILAGCRIVFSRVFPVGEA PH+HPLWQTAEQFGAVC
Sbjct: 1096 QNFFTHRSIDEADVRNILATEQKKILAGCRIVFSRVFPVGEASPHLHPLWQTAEQFGAVC 1155

Query: 426  TNQIDDQVTHVVANSLGTDKVNWALSTGRFVVHPGWVEASALLYRRANEHDFAIK 262
            T+QIDDQVTHVVANSLGTDKVNWALSTGR VVHPGWVEASALLYRRANEHDFAIK
Sbjct: 1156 TSQIDDQVTHVVANSLGTDKVNWALSTGRSVVHPGWVEASALLYRRANEHDFAIK 1210


>ref|XP_012831647.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 3
            isoform X3 [Erythranthe guttatus]
          Length = 1098

 Score =  731 bits (1886), Expect(2) = 0.0
 Identities = 393/591 (66%), Positives = 453/591 (76%), Gaps = 4/591 (0%)
 Frame = -2

Query: 2487 HNVNAAVNSLMSWQPVPSSTASMDTLSDPENSNVSIVDPANNFRSPLLKSSSTRSRDPRL 2308
            H+VN AVN L S QPV SS+ +MDT + PE SN        + R+P+LKS+S +SRDPRL
Sbjct: 490  HHVNPAVNILTSVQPVVSSSVAMDTSATPEISN--------SLRNPVLKSTSAKSRDPRL 541

Query: 2307 RLADSDVGPRNLNQGLPSIGSDESKSMFAGVMSSRKQKIVEELVLDGPALKRRKNELSGP 2128
            RL++SD G +N N+ L ++GS+ESK   +G++SSRKQK  EELVL+GPALKR++NELSGP
Sbjct: 542  RLSNSDAGAKNPNKSLSAVGSEESKWESSGMVSSRKQKTNEELVLNGPALKRQRNELSGP 601

Query: 2127 DTTLPLVTAISASQVAIPTPSFPVSNYIKSPLTSQTETLPVKXXXXXXXXXXXLRDIVGN 1948
             T +PLV+A S SQ+ +P     VS  I S LTSQ+E  P K           L+DI  +
Sbjct: 602  STAMPLVSATSTSQMTLP-----VSAPIMSLLTSQSEKFPSKNSNATSSLHSLLKDIAVD 656

Query: 1947 PSMLMSLLKMEHQKSSGDNNSATQMPNTNSILGVAPSTSGVLPFSSLLGQKPAGIV--PC 1774
            PS+ M++LKME+ KSS D  S TQ+ N+NS+LG  PS  GV+P SS +GQ  AG V  P 
Sbjct: 657  PSIWMNILKMENLKSSDDIKSMTQISNSNSVLGAVPSPVGVMPLSSTIGQISAGTVQIPS 716

Query: 1773 QTVSAEEPGKVRMKPRDPRRILHNNAPQKGVTTVSDQPKTTASSCSVMMGNSSAQGQENQ 1594
            Q VS EE GKVRMKPRDPRR+LHNNAPQK VT+V+DQPK  AS  S M    +   QE+Q
Sbjct: 717  QAVSVEESGKVRMKPRDPRRVLHNNAPQKDVTSVADQPKADASFGSAM----NTPKQEDQ 772

Query: 1593 KEKLVPSSCAKPPDITMQFTNNLRNIADIMSISQACIPSSILPQCVSSQPLQGHQV-GTE 1417
             E  + SS  KPPDITMQFTNNLRNIAD++S+SQ C  S +L Q  S QP QG  + G E
Sbjct: 773  LENKMSSSSMKPPDITMQFTNNLRNIADLLSVSQICTTSPVLAQIPSLQPAQGDLIAGKE 832

Query: 1416 TKIVANESVNFRSGSN-STSEAATSAPPRPLNAHAWSDVEHLFDGFDDHQKVAIQRERAR 1240
            T+    E  N R+ ++ +TSEAATS+PPRPLNA+AWSDVEHLF+GFDD QKVAIQRERAR
Sbjct: 833  TRGPIAEYGNIRNVTDITTSEAATSSPPRPLNANAWSDVEHLFEGFDDQQKVAIQRERAR 892

Query: 1239 RLEEQNKLFAAGKXXXXXXXXXXXLNSAKFVEVDPLHDEMLRKKEEQDREKPQRHLFRFP 1060
            RLEEQNKLFA  K           LNSAKFVEVDP HDEMLRKKEEQDREKP RHLFRFP
Sbjct: 893  RLEEQNKLFAVRKLCLVLDLDHTLLNSAKFVEVDPQHDEMLRKKEEQDREKPHRHLFRFP 952

Query: 1059 HMGMWTKLRPGIWNFLEKASKLYELHLYTMGNKYYATEMAKLLDPKGELFSGRVISRGDD 880
            HMGMWTKLRPG+WNFLEKASKLYELHLYTMGNKYYATEMAKLLDPKGELFSGRVISRGDD
Sbjct: 953  HMGMWTKLRPGVWNFLEKASKLYELHLYTMGNKYYATEMAKLLDPKGELFSGRVISRGDD 1012

Query: 879  GEPFDSDDRAPKNKDLEGVLGMESGVVIIDDSVRVWPHNKLNLIVVERYIY 727
            GEPFDSDDRAPK+KDLEGVLGMESGVVIIDDS+RVWPHNKLNLIVVERYIY
Sbjct: 1013 GEPFDSDDRAPKSKDLEGVLGMESGVVIIDDSIRVWPHNKLNLIVVERYIY 1063



 Score = 63.2 bits (152), Expect(2) = 0.0
 Identities = 31/37 (83%), Positives = 32/37 (86%)
 Frame = -3

Query: 734  IYIFPVVDGNLGYQVLPFLRLIMMREPKMGLWLLV*R 624
            IYIF VVDGNL YQVLPFLRLI MR+ KMGLWLLV R
Sbjct: 1062 IYIFHVVDGNLDYQVLPFLRLITMRDQKMGLWLLVRR 1098


>ref|XP_010249185.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 3
            [Nelumbo nucifera]
          Length = 1313

 Score =  765 bits (1975), Expect = 0.0
 Identities = 434/790 (54%), Positives = 521/790 (65%), Gaps = 52/790 (6%)
 Frame = -2

Query: 2475 AAVNSLMSWQPVPSSTASMDTLSDPENSNVSIVDPANNFRSPLLKSSSTRSRDPRLRLAD 2296
            A +NS  S + V S+T+  D LS         V    +  S +++++  ++RDPRLR A+
Sbjct: 530  ATINSSTSLKTVSSATSYADNLSGQGLVPAVSVGQLGSMSSHVIRTA--KNRDPRLRYAN 587

Query: 2295 SDVGPRNLNQGLPSIGSDESKSM-FAGVMSSRKQKIVEELVLDGPALKRRKNEL--SGPD 2125
            S+VGP +LNQ  PS   D  KS    G+M SRK KIVEE +LD    KR++N L  SG  
Sbjct: 588  SEVGPLDLNQRPPSGDHDIRKSEPLGGIMGSRKHKIVEESLLDDHTFKRQRNGLINSGAS 647

Query: 2124 TTLPLVTAI------SASQVAIPTPSFPVSNYIKSP------------------------ 2035
              + +V+        S+S    PT    +    +S                         
Sbjct: 648  GDVQVVSGSGGWLEESSSMGLQPTDRSRLIEKRESDPRKLGSGEASFGNKQDTGCSTYNV 707

Query: 2034 LTSQTETLPVKXXXXXXXXXXXLRDIVGNPSMLMSLLKMEHQK--------------SSG 1897
             T   E L              L+DI  NP+MLM L+KMEHQ+              S+ 
Sbjct: 708  TTGGNEQLTASGIGSTVSLPSLLKDIAVNPTMLMHLIKMEHQRLAVEALQKCGNPAQSTM 767

Query: 1896 DNNSATQMPNTNSILGVAPSTSGVLPFSSLLGQKPAGIVPCQTVSAEEPGKVRMKPRDPR 1717
             ++S++ MP   + + +A  T    P     G     +     +   + GK+RMKPRDPR
Sbjct: 768  QSSSSSVMPGKIASVNIASKTLSE-PEKKSAGNSQISVQTASMIPHGDLGKIRMKPRDPR 826

Query: 1716 RILHNNAPQKGVTTVSDQPK---TTASSCSVMMGNSSA--QGQENQKEKLVPSSCAKPPD 1552
            RILH+N  QK  ++  ++ K   T + +      N     QG++ Q   L+  S A PPD
Sbjct: 827  RILHSNTFQKSDSSGPERFKANGTPSPNTPTCRDNLIVRQQGEQAQTNSLLSQSTA-PPD 885

Query: 1551 ITMQFTNNLRNIADIMSISQACIPSSILPQCVSSQPLQGHQVGTETKIVANESVNFRSGS 1372
            I  QFT  L+NIA+I+S SQA    S++PQ +SSQP+       + K+VA +S + RS S
Sbjct: 886  IAQQFTKKLKNIANILSASQAINTPSVVPQTISSQPVPAKMDKVDMKVVATDSNDQRSWS 945

Query: 1371 NSTSEAATSAPPRPLNAHAWSDVEHLFDGFDDHQKVAIQRERARRLEEQNKLFAAGKXXX 1192
              T E   + P    + +AW DVEHLF+G+DD QK AIQRERARR+EEQN++FAA K   
Sbjct: 946  ALTPEERAAGPS---SQNAWGDVEHLFEGYDDQQKAAIQRERARRIEEQNQMFAARKLCL 1002

Query: 1191 XXXXXXXXLNSAKFVEVDPLHDEMLRKKEEQDREKPQRHLFRFPHMGMWTKLRPGIWNFL 1012
                    LNSAKFVEVDP+H+EMLRKKEEQDREKPQRHLFRF HMGMWTKLRPGIWNFL
Sbjct: 1003 VLDLDHTLLNSAKFVEVDPVHEEMLRKKEEQDREKPQRHLFRFTHMGMWTKLRPGIWNFL 1062

Query: 1011 EKASKLYELHLYTMGNKYYATEMAKLLDPKGELFSGRVISRGDDGEPFDSDDRAPKNKDL 832
            EKASKLYELHLYTMGNK YATEMAK+LDP G LF+GRVISRGDDG+PFD D+R PK+KDL
Sbjct: 1063 EKASKLYELHLYTMGNKLYATEMAKVLDPTGVLFAGRVISRGDDGDPFDGDERQPKSKDL 1122

Query: 831  EGVLGMESGVVIIDDSVRVWPHNKLNLIVVERYIYFPCSGRQFGLPGPSLLEIDHDERAE 652
            +GVLGMES VVIIDDSVRVWPHNKLNLIVVERY YFPCS RQ GL GPSLLEIDHDER E
Sbjct: 1123 DGVLGMESAVVIIDDSVRVWPHNKLNLIVVERYTYFPCSRRQLGLHGPSLLEIDHDERPE 1182

Query: 651  DGTLAACLTVIERIHEIFFGHESLDEGDVRNILACEQRKILAGCRIVFSRVFPVGEAKPH 472
            DGTLA+ L VIERIH+ FF H++L++ DVRNILA EQ+KILAGCRIVFSRVFPVGEA PH
Sbjct: 1183 DGTLASSLAVIERIHQNFFSHQNLNDVDVRNILAAEQQKILAGCRIVFSRVFPVGEANPH 1242

Query: 471  MHPLWQTAEQFGAVCTNQIDDQVTHVVANSLGTDKVNWALSTGRFVVHPGWVEASALLYR 292
            +HPLWQTAEQFGAVCTNQID+QVTHVVA SLGTDKVNWALSTGRFVVHPGWVEASALLYR
Sbjct: 1243 LHPLWQTAEQFGAVCTNQIDEQVTHVVAISLGTDKVNWALSTGRFVVHPGWVEASALLYR 1302

Query: 291  RANEHDFAIK 262
            RANEHDFAIK
Sbjct: 1303 RANEHDFAIK 1312


>ref|XP_007043830.1| RNA polymerase II C-terminal domain phosphatase-like 3, putative
            [Theobroma cacao] gi|508707765|gb|EOX99661.1| RNA
            polymerase II C-terminal domain phosphatase-like 3,
            putative [Theobroma cacao]
          Length = 1290

 Score =  762 bits (1968), Expect = 0.0
 Identities = 430/779 (55%), Positives = 522/779 (67%), Gaps = 51/779 (6%)
 Frame = -2

Query: 2445 PVPSSTASMDTLSDPENSNVSI--VDPANNFRSPLLKSSSTRSRDPRLRLADSDVGPRNL 2272
            P+ SS   +D+ S      ++     P ++  S ++  S  +SRDPRL  A+S+    +L
Sbjct: 520  PIVSSAPLVDSASSSLQGQITTRNATPMSSV-SNIVSKSLAKSRDPRLWFANSNASALDL 578

Query: 2271 NQGLPSIGSDESKSMFAGVMSSRKQKIVEELVLDGPALKRRKNELS--GPDTTLPLVTAI 2098
            N+ L  + +    +   G+M SRK+K VEE +LD PALKR++NEL   G    +  V+ I
Sbjct: 579  NERL--LHNASKVAPVGGIMDSRKKKSVEEPILDSPALKRQRNELENLGVARDVQTVSGI 636

Query: 2097 SA---------SQVA--------IPTPSFPVSNYIKSPLT---------SQTETLPVKXX 1996
                       SQ+         + + S  + N + S  T            E +PV   
Sbjct: 637  GGWLEDTDAIGSQITNRNQTAENLESNSRKMDNGVTSSSTLSGKTNITVGTNEQVPVTST 696

Query: 1995 XXXXXXXXXLRDIVGNPSMLMSLLKM---------EHQKSSGDNNSATQMPNTNSILGV- 1846
                      +DI  NP+ML+++LKM           QKS     S    P++NS+LGV 
Sbjct: 697  STPSLPALL-KDIAVNPTMLINILKMGQQQRLGAEAQQKSPDPVKSTFHQPSSNSLLGVV 755

Query: 1845 -------APSTSGVLPFSSLLGQKPAGIVPCQTVSAEEPGKVRMKPRDPRRILHNNAPQK 1687
                   +PS + V   SS +  KPAG +  Q  S +E GK+RMKPRDPRR+LH N+ Q+
Sbjct: 756  SSTNVIPSPSVNNVPSISSGISSKPAGNL--QVPSPDESGKIRMKPRDPRRVLHGNSLQR 813

Query: 1686 GVTTVSDQPKTTASSCSVMMG---NSSAQGQENQKE-KLVPSSCAKPPDITMQFTNNLRN 1519
              +   DQ KT  +  S   G   N +AQ  ++Q E K + S    PPDIT QFTNNL+N
Sbjct: 814  SGSMGLDQLKTNGALTSSTQGSKDNLNAQKLDSQTESKPMQSQLVPPPDITQQFTNNLKN 873

Query: 1518 IADIMSISQACIPSSILPQCVSSQPLQGHQVGTETKIVANESVNFRSGSNSTSEAATSAP 1339
            IADIMS+SQA      +   +  QP+       + K + + S + ++G+    EA  + P
Sbjct: 874  IADIMSVSQALTSLPPVSHNLVPQPVLIKSDSMDMKALVSNSEDQQTGAGLAPEAGATGP 933

Query: 1338 PRPLNAHAWSDVEHLFDGFDDHQKVAIQRERARRLEEQNKLFAAGKXXXXXXXXXXXLNS 1159
                + +AW DVEHLF+ +DD QK AIQRERARR+EEQ K+F+A K           LNS
Sbjct: 934  R---SQNAWGDVEHLFERYDDQQKAAIQRERARRIEEQKKMFSARKLCLVLDLDHTLLNS 990

Query: 1158 AKFVEVDPLHDEMLRKKEEQDREKPQRHLFRFPHMGMWTKLRPGIWNFLEKASKLYELHL 979
            AKF+EVDP+H+E+LRKKEEQDREKP+RHLFRF HMGMWTKLRPGIWNFLEKASKLYELHL
Sbjct: 991  AKFIEVDPVHEEILRKKEEQDREKPERHLFRFHHMGMWTKLRPGIWNFLEKASKLYELHL 1050

Query: 978  YTMGNKYYATEMAKLLDPKGELFSGRVISRGDDGEPFDSDDRAPKNKDLEGVLGMESGVV 799
            YTMGNK YATEMAK+LDPKG LF+GRVISRGDDG+PFD D+R P++KDLEGVLGMES VV
Sbjct: 1051 YTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPRSKDLEGVLGMESAVV 1110

Query: 798  IIDDSVRVWPHNKLNLIVVERYIYFPCSGRQFGLPGPSLLEIDHDERAEDGTLAACLTVI 619
            IIDDSVRVWPHNKLNLIVVERY YFPCS RQFGL GPSLLEIDHDER EDGTLA+ L VI
Sbjct: 1111 IIDDSVRVWPHNKLNLIVVERYTYFPCSRRQFGLLGPSLLEIDHDERPEDGTLASSLAVI 1170

Query: 618  ERIHEIFFGHESLDEGDVRNILACEQRKILAGCRIVFSRVFPVGEAKPHMHPLWQTAEQF 439
            ERIH+ FF H++LD+ DVRNILA EQRKILAGCRIVFSRVFPVGEA PH+HPLWQTAEQF
Sbjct: 1171 ERIHQDFFSHQNLDDVDVRNILASEQRKILAGCRIVFSRVFPVGEANPHLHPLWQTAEQF 1230

Query: 438  GAVCTNQIDDQVTHVVANSLGTDKVNWALSTGRFVVHPGWVEASALLYRRANEHDFAIK 262
            GAVCTNQID+ VTHVVANSLGTDKVNWALSTG+FVVHPGWVEASALLYRRANE DFAIK
Sbjct: 1231 GAVCTNQIDEHVTHVVANSLGTDKVNWALSTGKFVVHPGWVEASALLYRRANEVDFAIK 1289


>ref|XP_007225412.1| hypothetical protein PRUPE_ppa000589mg [Prunus persica]
            gi|462422348|gb|EMJ26611.1| hypothetical protein
            PRUPE_ppa000589mg [Prunus persica]
          Length = 1085

 Score =  762 bits (1967), Expect = 0.0
 Identities = 436/779 (55%), Positives = 513/779 (65%), Gaps = 46/779 (5%)
 Frame = -2

Query: 2460 LMSWQPVPSSTASMDTLSDPENSNVSIVDPANNFRSPLLKSSSTRSRDPRLRLADSDVGP 2281
            ++S  P+P  + SM   +  +++      P N+  S  +K+S+ +SRDPRLR A+SD+G 
Sbjct: 329  IVSPSPIPVGSPSMQGRATAKSAA-----PPNSEPSMTIKASA-KSRDPRLRFANSDMGA 382

Query: 2280 RNLNQGLPSIGSDESKSMFAGVMSSRKQKIVEELVLDGPALKRRKNELSGPDTTLPLVTA 2101
             NLNQ   ++     K      +SSRKQK +EE   DGPALKR++N L          TA
Sbjct: 383  LNLNQQPSTVVHSAPKVDSVITLSSRKQKPLEESRFDGPALKRQRNALENSGIVGDAKTA 442

Query: 2100 ----------------ISASQVAIPTPSFPVSNYIK---SPLTSQTETLPVKXXXXXXXX 1978
                            +++    +        N +K   SP T    T            
Sbjct: 443  SGSGGWLEDIGGVGPHLNSKNQTVENAETDPRNVVKVLSSPSTVDCNTNGPNSANEHVSL 502

Query: 1977 XXXL--------RDIVGNPSMLMSLLKM---------EHQKSSGDNNSATQMPNTNSIL- 1852
                        +DI  NP+ML++LLKM          HQKS+    + T   +++SIL 
Sbjct: 503  MGASMASLPELLKDIAVNPTMLLNLLKMGQQQRVASEAHQKSADPPKTMTHPTSSSSILV 562

Query: 1851 ----GVAPS-TSGVLPFSSLLGQKPAGIVPCQTVSA--EEPGKVRMKPRDPRRILHNNAP 1693
                G  PS TSG+L       Q PAG +P  +  A  +E GKVRMKPRDPRR LH NA 
Sbjct: 563  SAALGNVPSKTSGIL-------QTPAGTLPVSSQKALMDESGKVRMKPRDPRRALHGNAL 615

Query: 1692 QKGVTTVSDQPKTTASSCSVMMGNSSAQGQENQKEKLVPSSCAKPPDITMQFTNNLRNIA 1513
            QK  +   +Q +      S + GN      +  K KLV S     PDIT QFT NL+NIA
Sbjct: 616  QKSGSLGQEQFRNIIPPLSAIQGNKDNLNGQADK-KLVTSQSLDAPDITRQFTKNLKNIA 674

Query: 1512 DIMSISQACIPSSILPQCVSSQ--PLQGHQVGTETKIVANESVNFRSGSNSTSEAATSAP 1339
            DIMS+S      +I  Q VSSQ  P++  ++  + +    ES+       S SEAA + P
Sbjct: 675  DIMSVSNVSTSPAIASQSVSSQLVPIKPERIDLKPEEQRPESI-------SASEAAAAGP 727

Query: 1338 PRPLNAHAWSDVEHLFDGFDDHQKVAIQRERARRLEEQNKLFAAGKXXXXXXXXXXXLNS 1159
             R  +   W DVEHLF+G+DD QK AIQRER RR+EEQ K+FAA K           LNS
Sbjct: 728  SR--SPVMWGDVEHLFEGYDDQQKAAIQRERTRRIEEQKKMFAAHKLCLVLDLDHTLLNS 785

Query: 1158 AKFVEVDPLHDEMLRKKEEQDREKPQRHLFRFPHMGMWTKLRPGIWNFLEKASKLYELHL 979
            AKFVEVDP+HDE+LRKKEEQDREKPQRHLFRF HMGMWTKLRPGIWNFLEKAS+L+ELHL
Sbjct: 786  AKFVEVDPVHDEILRKKEEQDREKPQRHLFRFHHMGMWTKLRPGIWNFLEKASQLFELHL 845

Query: 978  YTMGNKYYATEMAKLLDPKGELFSGRVISRGDDGEPFDSDDRAPKNKDLEGVLGMESGVV 799
            YTMGNK YATEMAK+LDP G LF+GRVISRGDDG+P D D+R PK+KDLEGVLGMES VV
Sbjct: 846  YTMGNKLYATEMAKVLDPTGALFAGRVISRGDDGDPEDGDERIPKSKDLEGVLGMESAVV 905

Query: 798  IIDDSVRVWPHNKLNLIVVERYIYFPCSGRQFGLPGPSLLEIDHDERAEDGTLAACLTVI 619
            IIDDSVRVWPHNKLNLIVVERY YFPCS RQFGL GPSLLEIDHDER EDGTLA+ L VI
Sbjct: 906  IIDDSVRVWPHNKLNLIVVERYTYFPCSRRQFGLLGPSLLEIDHDERQEDGTLASSLAVI 965

Query: 618  ERIHEIFFGHESLDEGDVRNILACEQRKILAGCRIVFSRVFPVGEAKPHMHPLWQTAEQF 439
            E+IH++FF H SLDE DVRNILA EQRKILAGCRIVFSRVFPVGE KPH+HPLWQTAEQF
Sbjct: 966  EKIHQLFFSHSSLDEADVRNILASEQRKILAGCRIVFSRVFPVGEVKPHLHPLWQTAEQF 1025

Query: 438  GAVCTNQIDDQVTHVVANSLGTDKVNWALSTGRFVVHPGWVEASALLYRRANEHDFAIK 262
            GAVCTNQIDDQVTHVVANSLGTDKVNWALS+G++VVHPGWVEASALLYRRANE DFAIK
Sbjct: 1026 GAVCTNQIDDQVTHVVANSLGTDKVNWALSSGKYVVHPGWVEASALLYRRANEQDFAIK 1084


>ref|XP_002512650.1| RNA polymerase II ctd phosphatase, putative [Ricinus communis]
            gi|223548611|gb|EEF50102.1| RNA polymerase II ctd
            phosphatase, putative [Ricinus communis]
          Length = 1195

 Score =  759 bits (1959), Expect = 0.0
 Identities = 440/794 (55%), Positives = 521/794 (65%), Gaps = 59/794 (7%)
 Frame = -2

Query: 2466 NSLMSWQPVPS-STASMDTLSDPENSNVSIVDPANNFRSPLLKSSSTRSRDPRLRLADSD 2290
            N L S Q   S S   MD  S P   ++     A++  S  +K+S+ +SRDPRLR  +SD
Sbjct: 419  NPLTSGQSNASISLPRMDGSSLPGVISIKSAVRASSAPSLTVKASA-KSRDPRLRFVNSD 477

Query: 2289 VGPRNLNQGLPSIGSDESKSMFAGVMSSRKQKIVEELVLDGPALKRRKNELSGP------ 2128
                + N     + +        G M+ ++QKIV++ + DG +LKR+KN L         
Sbjct: 478  SNALDQNHRAVPVVNTLKVEPIGGTMNKKRQKIVDDPIPDGHSLKRQKNALENSGVVRDV 537

Query: 2127 -----------DTTLPLVTAISASQVAIPTPSFP----------VSNYIKSPLTSQTETL 2011
                       DT +     ++ +Q+     S P           S+ I S   S TE +
Sbjct: 538  KTMVGSGGWLEDTDMVGPQTMNKNQLVDNAESDPRRKDGGGVCTSSSCISSVNISGTEQI 597

Query: 2010 PVKXXXXXXXXXXXL------------RDIVGNPSMLMSLLKM--------EHQKSSGDN 1891
            PV                         ++I  NP+ML+++LKM        E Q+   D 
Sbjct: 598  PVTGTSVPIGGELVPVKGSTAAIPDLLKNIAVNPTMLINILKMGQQQRLALEAQQKPVDP 657

Query: 1890 NSATQMP-NTNSILGVAP----STSGVLPFSSLLGQKPAGIVPC--QTVSAEEPGKVRMK 1732
              +T  P N+NS+LG  P    + SG+LP       +PAG V    Q  +A++ GK+RMK
Sbjct: 658  AKSTTYPLNSNSMLGTVPVVGAAHSGILP-------RPAGTVQVSPQLGTADDLGKIRMK 710

Query: 1731 PRDPRRILHNNAPQKGVTTVSDQPKTTASSCSVMM---GNSSAQGQENQKEKL-VPSSCA 1564
            PRDPRR+LHNNA Q+  +  S+  KT  +S  +      N + Q QE Q EK  VP    
Sbjct: 711  PRDPRRVLHNNALQRNGSMGSEHLKTNLTSIPINQETKDNQNLQKQEGQVEKKPVPLQSL 770

Query: 1563 KPPDITMQFTNNLRNIADIMSISQACIPSSILPQCVSSQPLQGHQVGTETKIVANESVNF 1384
              PDI+M FT NL+NIADI+S+S A     ++PQ  +SQP++       T I +++    
Sbjct: 771  ALPDISMPFTKNLKNIADIVSVSHASTSQPLVPQNPASQPMR-------TTISSSDQF-- 821

Query: 1383 RSGSNSTSEAATSAPPRPLNAHAWSDVEHLFDGFDDHQKVAIQRERARRLEEQNKLFAAG 1204
              G  S   AA +A   P   +AW DVEHLF+G++D QK AIQRERARR+EEQ KLF+A 
Sbjct: 822  -LGIGSAPGAAAAAAAGPRTQNAWGDVEHLFEGYNDQQKAAIQRERARRIEEQKKLFSAR 880

Query: 1203 KXXXXXXXXXXXLNSAKFVEVDPLHDEMLRKKEEQDREKPQRHLFRFPHMGMWTKLRPGI 1024
            K           LNSAKFVEVDP+HDE+LRKKEEQDREK  RHLFRFPHMGMWTKLRPGI
Sbjct: 881  KLCLVLDLDHTLLNSAKFVEVDPVHDEILRKKEEQDREKAHRHLFRFPHMGMWTKLRPGI 940

Query: 1023 WNFLEKASKLYELHLYTMGNKYYATEMAKLLDPKGELFSGRVISRGDDGEPFDSDDRAPK 844
            WNFLEKASKLYELHLYTMGNK YATEMAK+LDP G LF+GRVISRGDDGEPFD D+R PK
Sbjct: 941  WNFLEKASKLYELHLYTMGNKLYATEMAKVLDPTGVLFNGRVISRGDDGEPFDGDERIPK 1000

Query: 843  NKDLEGVLGMESGVVIIDDSVRVWPHNKLNLIVVERYIYFPCSGRQFGLPGPSLLEIDHD 664
            +KDLEGVLGMESGVVI+DDSVRVWPHNKLNLIVVERYIYFPCS RQFGLPGPSLLEIDHD
Sbjct: 1001 SKDLEGVLGMESGVVIMDDSVRVWPHNKLNLIVVERYIYFPCSRRQFGLPGPSLLEIDHD 1060

Query: 663  ERAEDGTLAACLTVIERIHEIFFGHESLDEGDVRNILACEQRKILAGCRIVFSRVFPVGE 484
            ER EDGTLA  L VIERIH+ FF H SLDE DVRNILA EQRKILAGCRIVFSRVFPVGE
Sbjct: 1061 ERPEDGTLACSLAVIERIHQNFFTHPSLDEADVRNILASEQRKILAGCRIVFSRVFPVGE 1120

Query: 483  AKPHMHPLWQTAEQFGAVCTNQIDDQVTHVVANSLGTDKVNWALSTGRFVVHPGWVEASA 304
            A PH+HPLWQTAEQFGAVCTNQID+QVTHVVANSLGTDKVNWALSTGRFVV+PGWVEASA
Sbjct: 1121 ANPHLHPLWQTAEQFGAVCTNQIDEQVTHVVANSLGTDKVNWALSTGRFVVYPGWVEASA 1180

Query: 303  LLYRRANEHDFAIK 262
            LLYRRANE DFAIK
Sbjct: 1181 LLYRRANEQDFAIK 1194


>ref|XP_002304648.2| hypothetical protein POPTR_0003s16280g [Populus trichocarpa]
            gi|550343308|gb|EEE79627.2| hypothetical protein
            POPTR_0003s16280g [Populus trichocarpa]
          Length = 1247

 Score =  756 bits (1952), Expect = 0.0
 Identities = 434/808 (53%), Positives = 520/808 (64%), Gaps = 68/808 (8%)
 Frame = -2

Query: 2481 VNAAVNSLMSWQPVPSSTASMDTLSDP----ENSNVSIVDPANNFRSPLLKSSST----- 2329
            VN  V+   S  P PS          P     NS++ +V P  N       +SST     
Sbjct: 453  VNPPVSDRKSASPSPSPPPPPPPPPPPPPHLNNSSIRVVIPTRNSAPVSSGTSSTVKASA 512

Query: 2328 RSRDPRLRLADSDVGPRNLNQGLPSIGSDESKSMFAGVMS-SRKQKIVEELVLDGPALKR 2152
            +SRDPRLR  ++D    + NQ    + ++  ++  +G ++ SRKQKI EE VLDG +LKR
Sbjct: 513  KSRDPRLRYVNTDASALDQNQRTLLMVNNPPRAEPSGAIAGSRKQKI-EEDVLDGTSLKR 571

Query: 2151 RKNELSG-----------------PDTTLPLVTAISASQVAIPT-PSFPVSNYIKSPLTS 2026
            ++N                      DT +     ++ +Q A    P   ++N +  P T 
Sbjct: 572  QRNSFDNFGVVRDIRSMTGTGGWLEDTDMAEPQTVNKNQWAENAEPGQRINNGVVCPSTG 631

Query: 2025 Q-----------------------TETLPVKXXXXXXXXXXXLRDIVGNPSMLMSLLKME 1915
                                    +E  PV             +DI  NP+ML+++LKM 
Sbjct: 632  SVMSSVSCSGNVQVPVMGINTIAGSEQAPVTSTTTASLPDLL-KDITVNPTMLINILKMG 690

Query: 1914 HQ---------KSSGDNNSATQMPNTNSILGVAPSTSGVLPFSSLLGQKPAGIV--PCQT 1768
             Q         K +    S +  P++N++LG  P  + V    S +  + AG    P Q 
Sbjct: 691  QQQRLALDGQQKLADPAKSTSHPPSSNTVLGAIPEVNAVSSLPSGILPRSAGKAQGPSQI 750

Query: 1767 VSAEEPGKVRMKPRDPRRILHNNAPQKGVTTVSDQPKTTASSCSVMMGNSSAQGQENQKE 1588
             + +E GK+RMKPRDPRR+LHNNA Q+  +  S+Q KTT  + S   G    Q  + Q E
Sbjct: 751  ATTDESGKIRMKPRDPRRVLHNNALQRAGSLGSEQFKTTTLT-STTQGTKDNQNLQKQ-E 808

Query: 1587 KLVPSSCAKPPDITMQFTNNLRNIADIMSISQACIPSSILPQCVSSQPLQGHQVGTETKI 1408
             L       PPDI+  FT +L+NIADI+S+SQ C     + Q V+SQP+Q          
Sbjct: 809  GLAELKPVVPPDISSPFTKSLKNIADIVSVSQTCTTPPFVSQNVASQPVQ---------- 858

Query: 1407 VANESVNFRSG-SNSTSEAATSAPPR-----PLNAHAWSDVEHLFDGFDDHQKVAIQRER 1246
            + ++ V+ ++G SNS  +   ++ P       L+ + W DVEHLF+G+DD QK AIQRER
Sbjct: 859  IKSDRVDGKTGISNSDQKMGPASSPEVVAASSLSQNTWEDVEHLFEGYDDQQKAAIQRER 918

Query: 1245 ARRLEEQNKLFAAGKXXXXXXXXXXXLNSAKFVEVDPLHDEMLRKKEEQDREKPQRHLFR 1066
            ARR+EEQ KLFAA K           LNSAKFVEVDP+HDE+LRKKEEQDREKP RHLFR
Sbjct: 919  ARRIEEQKKLFAARKLCLVLDLDHTLLNSAKFVEVDPVHDEILRKKEEQDREKPYRHLFR 978

Query: 1065 FPHMGMWTKLRPGIWNFLEKASKLYELHLYTMGNKYYATEMAKLLDPKGELFSGRVISRG 886
            FPHMGMWTKLRPGIWNFLEKASKLYELHLYTMGNK YATEMAK+LDPKG LF+GRV+SRG
Sbjct: 979  FPHMGMWTKLRPGIWNFLEKASKLYELHLYTMGNKLYATEMAKVLDPKGVLFAGRVVSRG 1038

Query: 885  DDGEPFDSDDRAPKNKDLEGVLGMESGVVIIDDSVRVWPHNKLNLIVVERYIYFPCSGRQ 706
            DDG+  D D+R PK+KDLEGVLGMESGVVIIDDS+RVWPHNKLNLIVVERYIYFPCS RQ
Sbjct: 1039 DDGDLLDGDERVPKSKDLEGVLGMESGVVIIDDSLRVWPHNKLNLIVVERYIYFPCSRRQ 1098

Query: 705  FGLPGPSLLEIDHDERAEDGTLAACLTVIERIHEIFFGHESLDEGDVRNILACEQRKILA 526
            FGLPGPSLLEIDHDER EDGTLA  L VIERIH+ FF H SLDE DVRNILA EQRKILA
Sbjct: 1099 FGLPGPSLLEIDHDERPEDGTLACSLAVIERIHQNFFTHHSLDEADVRNILASEQRKILA 1158

Query: 525  GCRIVFSRVFPVGEAKPHMHPLWQTAEQFGAVCTNQIDDQVTHVVANSLGTDKVNWALST 346
            GCRIVFSRVFPVGE  PH+HPLWQ+AEQFGAVCTNQID+QVTHVVANSLGTDKVNWALST
Sbjct: 1159 GCRIVFSRVFPVGEVNPHLHPLWQSAEQFGAVCTNQIDEQVTHVVANSLGTDKVNWALST 1218

Query: 345  GRFVVHPGWVEASALLYRRANEHDFAIK 262
            GRFVVHPGWVEASALLYRRANE DFAIK
Sbjct: 1219 GRFVVHPGWVEASALLYRRANEQDFAIK 1246


>ref|XP_002304714.2| hypothetical protein POPTR_0003s16280g [Populus trichocarpa]
            gi|550343307|gb|EEE79693.2| hypothetical protein
            POPTR_0003s16280g [Populus trichocarpa]
          Length = 1030

 Score =  756 bits (1952), Expect = 0.0
 Identities = 434/808 (53%), Positives = 520/808 (64%), Gaps = 68/808 (8%)
 Frame = -2

Query: 2481 VNAAVNSLMSWQPVPSSTASMDTLSDP----ENSNVSIVDPANNFRSPLLKSSST----- 2329
            VN  V+   S  P PS          P     NS++ +V P  N       +SST     
Sbjct: 236  VNPPVSDRKSASPSPSPPPPPPPPPPPPPHLNNSSIRVVIPTRNSAPVSSGTSSTVKASA 295

Query: 2328 RSRDPRLRLADSDVGPRNLNQGLPSIGSDESKSMFAGVMS-SRKQKIVEELVLDGPALKR 2152
            +SRDPRLR  ++D    + NQ    + ++  ++  +G ++ SRKQKI EE VLDG +LKR
Sbjct: 296  KSRDPRLRYVNTDASALDQNQRTLLMVNNPPRAEPSGAIAGSRKQKI-EEDVLDGTSLKR 354

Query: 2151 RKNELSG-----------------PDTTLPLVTAISASQVAIPT-PSFPVSNYIKSPLTS 2026
            ++N                      DT +     ++ +Q A    P   ++N +  P T 
Sbjct: 355  QRNSFDNFGVVRDIRSMTGTGGWLEDTDMAEPQTVNKNQWAENAEPGQRINNGVVCPSTG 414

Query: 2025 Q-----------------------TETLPVKXXXXXXXXXXXLRDIVGNPSMLMSLLKME 1915
                                    +E  PV             +DI  NP+ML+++LKM 
Sbjct: 415  SVMSSVSCSGNVQVPVMGINTIAGSEQAPVTSTTTASLPDLL-KDITVNPTMLINILKMG 473

Query: 1914 HQ---------KSSGDNNSATQMPNTNSILGVAPSTSGVLPFSSLLGQKPAGIV--PCQT 1768
             Q         K +    S +  P++N++LG  P  + V    S +  + AG    P Q 
Sbjct: 474  QQQRLALDGQQKLADPAKSTSHPPSSNTVLGAIPEVNAVSSLPSGILPRSAGKAQGPSQI 533

Query: 1767 VSAEEPGKVRMKPRDPRRILHNNAPQKGVTTVSDQPKTTASSCSVMMGNSSAQGQENQKE 1588
             + +E GK+RMKPRDPRR+LHNNA Q+  +  S+Q KTT  + S   G    Q  + Q E
Sbjct: 534  ATTDESGKIRMKPRDPRRVLHNNALQRAGSLGSEQFKTTTLT-STTQGTKDNQNLQKQ-E 591

Query: 1587 KLVPSSCAKPPDITMQFTNNLRNIADIMSISQACIPSSILPQCVSSQPLQGHQVGTETKI 1408
             L       PPDI+  FT +L+NIADI+S+SQ C     + Q V+SQP+Q          
Sbjct: 592  GLAELKPVVPPDISSPFTKSLKNIADIVSVSQTCTTPPFVSQNVASQPVQ---------- 641

Query: 1407 VANESVNFRSG-SNSTSEAATSAPPR-----PLNAHAWSDVEHLFDGFDDHQKVAIQRER 1246
            + ++ V+ ++G SNS  +   ++ P       L+ + W DVEHLF+G+DD QK AIQRER
Sbjct: 642  IKSDRVDGKTGISNSDQKMGPASSPEVVAASSLSQNTWEDVEHLFEGYDDQQKAAIQRER 701

Query: 1245 ARRLEEQNKLFAAGKXXXXXXXXXXXLNSAKFVEVDPLHDEMLRKKEEQDREKPQRHLFR 1066
            ARR+EEQ KLFAA K           LNSAKFVEVDP+HDE+LRKKEEQDREKP RHLFR
Sbjct: 702  ARRIEEQKKLFAARKLCLVLDLDHTLLNSAKFVEVDPVHDEILRKKEEQDREKPYRHLFR 761

Query: 1065 FPHMGMWTKLRPGIWNFLEKASKLYELHLYTMGNKYYATEMAKLLDPKGELFSGRVISRG 886
            FPHMGMWTKLRPGIWNFLEKASKLYELHLYTMGNK YATEMAK+LDPKG LF+GRV+SRG
Sbjct: 762  FPHMGMWTKLRPGIWNFLEKASKLYELHLYTMGNKLYATEMAKVLDPKGVLFAGRVVSRG 821

Query: 885  DDGEPFDSDDRAPKNKDLEGVLGMESGVVIIDDSVRVWPHNKLNLIVVERYIYFPCSGRQ 706
            DDG+  D D+R PK+KDLEGVLGMESGVVIIDDS+RVWPHNKLNLIVVERYIYFPCS RQ
Sbjct: 822  DDGDLLDGDERVPKSKDLEGVLGMESGVVIIDDSLRVWPHNKLNLIVVERYIYFPCSRRQ 881

Query: 705  FGLPGPSLLEIDHDERAEDGTLAACLTVIERIHEIFFGHESLDEGDVRNILACEQRKILA 526
            FGLPGPSLLEIDHDER EDGTLA  L VIERIH+ FF H SLDE DVRNILA EQRKILA
Sbjct: 882  FGLPGPSLLEIDHDERPEDGTLACSLAVIERIHQNFFTHHSLDEADVRNILASEQRKILA 941

Query: 525  GCRIVFSRVFPVGEAKPHMHPLWQTAEQFGAVCTNQIDDQVTHVVANSLGTDKVNWALST 346
            GCRIVFSRVFPVGE  PH+HPLWQ+AEQFGAVCTNQID+QVTHVVANSLGTDKVNWALST
Sbjct: 942  GCRIVFSRVFPVGEVNPHLHPLWQSAEQFGAVCTNQIDEQVTHVVANSLGTDKVNWALST 1001

Query: 345  GRFVVHPGWVEASALLYRRANEHDFAIK 262
            GRFVVHPGWVEASALLYRRANE DFAIK
Sbjct: 1002 GRFVVHPGWVEASALLYRRANEQDFAIK 1029


>ref|XP_012459418.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 3
            isoform X2 [Gossypium raimondii]
          Length = 1251

 Score =  754 bits (1947), Expect = 0.0
 Identities = 429/774 (55%), Positives = 512/774 (66%), Gaps = 49/774 (6%)
 Frame = -2

Query: 2436 SSTASMDTLSDPENSNVSIVDPANNFRSPLLKSSSTRSRDPRLRLADSDVGPRNLNQGLP 2257
            SST+SM      +N+    V  A+N    +L  +S +SRDPRLR A+S+V   +LNQ   
Sbjct: 487  SSTSSMQGQFTTQNATPVTVSSASN----ILSKASAKSRDPRLRFANSNVSALDLNQR-- 540

Query: 2256 SIGSDESKSMFAGVMSSRKQKIVEELVLDGPALKRRKNELSG------------------ 2131
             + +       +G+M  RK+K  EE VLDGPA KR+KNEL                    
Sbjct: 541  PLHNASKVPPVSGIMDPRKKKSTEEPVLDGPAPKRQKNELENFGVRDVQAVSGNGGWLED 600

Query: 2130 PDTTLPLVTAISASQVAIPTPSFPVSNYI--KSPLTSQTETLPVKXXXXXXXXXXXL--- 1966
             D     +T  + +   + + S  + + +   S L+ +T T   K               
Sbjct: 601  TDNCESQITNRNQTMETLDSNSRKMEHGVTCSSTLSGKTNTTVNKNEQVPLTGMSNPSLP 660

Query: 1965 ---RDIVGNPSMLMSLLKM---------EHQKSSGDNNSATQMPNTNSILGV-------- 1846
               +DI  NP+ML+++LKM           QK+     +    P++N +LGV        
Sbjct: 661  ALLKDIAVNPTMLINILKMGQQQRLPSESQQKTPDPLKNTLYQPSSNPVLGVIPPANVIP 720

Query: 1845 APSTSGVLPFSSLLGQKPAGIVPCQTVSAEEPGKVRMKPRDPRRILHNNAPQKGVTTVSD 1666
            +PS + V   SS    KPAG +  Q    +E  K+RMKPRDPRR+LH N  QK  +   D
Sbjct: 721  SPSVNVVPSSSSGTLSKPAGNL--QGPPLDESCKIRMKPRDPRRVLHGNVLQKSGSVGPD 778

Query: 1665 QPKTT----ASSCSVMMGNSSAQGQ-ENQKE-KLVPSSCAKPPDITMQFTNNLRNIADIM 1504
            Q KT     ASS      N +AQ Q ENQ E K +      PPDI  QFT +L+NIA +M
Sbjct: 779  QLKTNGTSPASSTQGSKDNMNAQKQLENQIEAKPIQCQFVPPPDIAQQFTQSLKNIAGMM 838

Query: 1503 SISQACIPSSILPQCVSSQPLQGHQVGTETKIVANESVNFRSGSNSTSEAATSAPPRPLN 1324
            S  Q+      + Q + SQP+Q      +     + S + ++G+ +  EA  + PP   N
Sbjct: 839  SGPQSFAGLPAVSQNLVSQPIQVKSETADKNTKGSNSEDQQTGTGTAPEAGVTCPPPSQN 898

Query: 1323 AHAWSDVEHLFDGFDDHQKVAIQRERARRLEEQNKLFAAGKXXXXXXXXXXXLNSAKFVE 1144
            A  W DVEHLF+ +DD QK AIQRERARR+EEQ K+FAA K           LNSAKF+E
Sbjct: 899  A--WGDVEHLFEKYDDRQKAAIQRERARRIEEQKKMFAARKLCLVLDLDHTLLNSAKFIE 956

Query: 1143 VDPLHDEMLRKKEEQDREKPQRHLFRFPHMGMWTKLRPGIWNFLEKASKLYELHLYTMGN 964
            VDP+H+E+LRKKEEQDREKPQRHLFRF HMGMWTKLRPGIWNFLEKASKLYELHLYTMGN
Sbjct: 957  VDPVHEEILRKKEEQDREKPQRHLFRFHHMGMWTKLRPGIWNFLEKASKLYELHLYTMGN 1016

Query: 963  KYYATEMAKLLDPKGELFSGRVISRGDDGEPFDSDDRAPKNKDLEGVLGMESGVVIIDDS 784
            K YATEMAK+LDPKG LF+GRVISRGDDG+PFD D+R P++KDLEGVLGMES VVIIDDS
Sbjct: 1017 KLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPRSKDLEGVLGMESSVVIIDDS 1076

Query: 783  VRVWPHNKLNLIVVERYIYFPCSGRQFGLPGPSLLEIDHDERAEDGTLAACLTVIERIHE 604
            VRVWPHNKLNLIVVERY YFPCS RQFGL GPSLLEIDHDER EDGTLA+ L VIERIH+
Sbjct: 1077 VRVWPHNKLNLIVVERYTYFPCSRRQFGLLGPSLLEIDHDERPEDGTLASSLAVIERIHQ 1136

Query: 603  IFFGHESLDEGDVRNILACEQRKILAGCRIVFSRVFPVGEAKPHMHPLWQTAEQFGAVCT 424
             FF H++LD+ DVRNILA EQRKIL+GCRIVFSRVFPVGEA PH+HPLWQTAEQFGAVCT
Sbjct: 1137 NFFSHQNLDDLDVRNILATEQRKILSGCRIVFSRVFPVGEANPHLHPLWQTAEQFGAVCT 1196

Query: 423  NQIDDQVTHVVANSLGTDKVNWALSTGRFVVHPGWVEASALLYRRANEHDFAIK 262
            NQID+ VTHVVANSLGTDKVNWALSTG+FVVHPGWVEASALLYRRANEHDFAIK
Sbjct: 1197 NQIDEHVTHVVANSLGTDKVNWALSTGKFVVHPGWVEASALLYRRANEHDFAIK 1250