BLASTX nr result
ID: Perilla23_contig00011347
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Perilla23_contig00011347
(4089 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_012845534.1| PREDICTED: LOW QUALITY PROTEIN: probable RNA... 1240 0.0
ref|XP_011078257.1| PREDICTED: probable RNA-dependent RNA polyme... 1214 0.0
gb|AHL27588.1| RNA-dependent RNA polymerase 5 [Salvia miltiorrhiza] 1129 0.0
ref|XP_011093632.1| PREDICTED: probable RNA-dependent RNA polyme... 1110 0.0
gb|EYU30717.1| hypothetical protein MIMGU_mgv1a001145mg [Erythra... 1064 0.0
emb|CDP03267.1| unnamed protein product [Coffea canephora] 910 0.0
ref|XP_009780069.1| PREDICTED: probable RNA-dependent RNA polyme... 871 0.0
ref|XP_009780070.1| PREDICTED: probable RNA-dependent RNA polyme... 864 0.0
ref|XP_009592436.1| PREDICTED: probable RNA-dependent RNA polyme... 861 0.0
ref|XP_010322170.1| PREDICTED: probable RNA-dependent RNA polyme... 852 0.0
ref|XP_009592437.1| PREDICTED: probable RNA-dependent RNA polyme... 851 0.0
ref|XP_009760371.1| PREDICTED: probable RNA-dependent RNA polyme... 835 0.0
ref|XP_010313737.1| PREDICTED: probable RNA-dependent RNA polyme... 834 0.0
ref|XP_009760370.1| PREDICTED: probable RNA-dependent RNA polyme... 834 0.0
ref|XP_009603362.1| PREDICTED: probable RNA-dependent RNA polyme... 823 0.0
ref|XP_009603361.1| PREDICTED: probable RNA-dependent RNA polyme... 822 0.0
emb|CDP03268.1| unnamed protein product [Coffea canephora] 813 0.0
ref|XP_006353487.1| PREDICTED: probable RNA-dependent RNA polyme... 805 0.0
ref|XP_010656269.1| PREDICTED: probable RNA-dependent RNA polyme... 793 0.0
ref|XP_009760372.1| PREDICTED: probable RNA-dependent RNA polyme... 791 0.0
>ref|XP_012845534.1| PREDICTED: LOW QUALITY PROTEIN: probable RNA-dependent RNA polymerase
5 [Erythranthe guttatus]
Length = 1040
Score = 1240 bits (3208), Expect = 0.0
Identities = 633/1034 (61%), Positives = 777/1034 (75%), Gaps = 31/1034 (2%)
Frame = -1
Query: 3963 DVRLPESVEDIIKRVSMEKQTQPLDFNARKLLRDIGEQGSLQILGTVLSSSSPIKTFSGF 3784
D+RLP+ VE I+ + +EK PL ARK+L +IGEQ S+++L +LSS+ PIK+FSGF
Sbjct: 11 DIRLPKKVEMTIQTICLEKNQPPLKNYARKMLAEIGEQASMEVLTEILSSNQPIKSFSGF 70
Query: 3783 VSFLVKQKYPIHKSP-----SSASPLGLR--SPSSASPNIARNGEGLQSPLS-------- 3649
VSF+VK+ YP+ + S+SP + SPSS SP+ RNGE L+SPLS
Sbjct: 71 VSFMVKKDYPVQAAAVLAAYDSSSPQSQKMWSPSSTSPH-TRNGENLESPLSRLSMNSIT 129
Query: 3648 -NLQRTGFQNISCQLSFEDETLESRSCLVRDVSSLSGEHGEMTESVTISPQLLILNKLEY 3472
NL T Q++ C+LSFEDET E+RS + + E+ E +TI+ QL+ LNKLEY
Sbjct: 130 SNLHSTSPQSVGCRLSFEDETQENRS---PNCGTSQPSVPEVKEPITITQQLITLNKLEY 186
Query: 3471 RKLFLLLSYIKRNKLEAVLTMDDANEVFSMKHLSMPEFEKNIWARYGRKFCEESDRSQYL 3292
RKLFL+LSYI R KLE V+T++DA+E++ M M FE IW +YG++F +ESDRSQYL
Sbjct: 187 RKLFLVLSYIGREKLEDVVTVEDADEIYRMNEFPMQAFENKIWKKYGQRFYDESDRSQYL 246
Query: 3291 DWDSGKTHFYYCHVSSDGSYYFKGPYLNSLRTHLQRSLGDENVLIVKFSVDGKYSAEKIV 3112
DWDSGKTH YYCHV DG YYFKGPYLNS++THLQRSLGD+N+LIVKF DG + I
Sbjct: 247 DWDSGKTHVYYCHVYQDGRYYFKGPYLNSMKTHLQRSLGDDNILIVKFLEDGAFGTGNIA 306
Query: 3111 EQXXXXXXXXXXXXXFKDERKKVKKNRDWEDKNCTYSDVKSYFVHFDSISTHGNEENYIL 2932
++ FKD+RKKV KN+ ++K TYS+V+ +FV DS+S G +ENYIL
Sbjct: 307 QEGILVGLRRYRFFVFKDDRKKVNKNQSDKEKKATYSNVRCFFVRVDSVSPSGYDENYIL 366
Query: 2931 SRKSVSEARRLFMHIHTLSTLEKYMARFSLILSKTTKLYLDFAAITVDIIEDIPFQDENG 2752
SRK++ EARR+FMHIHT+S++EK MAR SLILSK+ KL ++ AA+ ++ I+DIPFQDE G
Sbjct: 367 SRKTIGEARRMFMHIHTISSIEKCMARLSLILSKSIKLEINLAAVIIEKIKDIPFQDEGG 426
Query: 2751 SIIHDEDGKPILHTDGTGYISEDLAM---------KYITNSSSE----FATFGGTVCQER 2611
+IHDEDGKPILHTDGTGYISEDLA+ KY T+ E FA F Q R
Sbjct: 427 FVIHDEDGKPILHTDGTGYISEDLAIRCQICFSAPKYGTDDRFEKNDHFADFADIASQVR 486
Query: 2610 GAAARINEPPLLIQCRLFHDGYAVKGTLLLNRKLEPGRIQIRPSMIKVEKDQALQSEETL 2431
A +R E PLL+QCR+FH+GYAVKGTLL+NRKLEPG IQIRPSMIKVE+D ++ EE
Sbjct: 487 EAESRNKEAPLLVQCRIFHEGYAVKGTLLVNRKLEPGTIQIRPSMIKVERDHNIKVEEAF 546
Query: 2430 NSLEIVNISHRPPRNYLSKYLIALLSYGGVPQEFFLNLLSNALNETQNVYSNRRSALRVA 2251
NSLEIVNISH+P RN LSKYLIALLSYGGVPQEFFLNL++N L + +NVY+NRR+ALRVA
Sbjct: 547 NSLEIVNISHKPGRNCLSKYLIALLSYGGVPQEFFLNLVANTLEDARNVYTNRRAALRVA 606
Query: 2250 SLHDGLYWGFEAQRMICSGVPLNEPYLQHCLYNVXXXXXXXXXXXXLPVSESFYLMGTAD 2071
S H GL +GF AQRMICSGVPL+EPYLQ CL N+ +P++ESFYLMGTAD
Sbjct: 607 SNHAGLDYGFLAQRMICSGVPLDEPYLQLCLSNLENGEKTKLKTGKIPLNESFYLMGTAD 666
Query: 2070 PTGVLNNDEVCVILDSGQISGKVLVYRNPGMHFGDIHVMEAIYVKELEDFVGNAKYGVFF 1891
PTGVLNNDEVCVIL +GQISGKVLVYRNPGMHFGD+HVMEA+YVKELE+FVGNAKYGVFF
Sbjct: 667 PTGVLNNDEVCVILGNGQISGKVLVYRNPGMHFGDVHVMEAVYVKELEEFVGNAKYGVFF 726
Query: 1890 STKGQKSAAYEMATGDFDGDLYWISRNPELLKHFKANEPWRRVYSVPDAEKRNPQKSSN- 1714
STKG SAAYEMATGDFDGD+YW+SRNPELLK+FKA++PW+RV S PD++K+NP++ S+
Sbjct: 727 STKGATSAAYEMATGDFDGDMYWVSRNPELLKYFKASKPWKRVLSAPDSKKKNPKEFSDX 786
Query: 1713 -XXXXXXXXXXEARRPSYSMGIAADSWLAYMDRLLSLGDDRAIEKDSLKRKMIKLIDIYY 1537
EAR PS++M AADSWL +MDRLL+LGDDR EK SL +KMI+L+DIYY
Sbjct: 787 ELENELFQLCLEARTPSFNMATAADSWLTFMDRLLTLGDDRTAEKKSLMKKMIRLVDIYY 846
Query: 1536 DALDAPKSGKKVDVPNDLRAEMFPHHMGKAPDISYRSSSILGKIYDSVLEFHDEAPPRRQ 1357
DALDAPKSGKKV VP +LRAEM+PHHM K ++SY SSS+LG+IYD V ++ PR+
Sbjct: 847 DALDAPKSGKKVKVPEELRAEMYPHHMEKGSELSYHSSSVLGQIYDRVDALKNDFVPRK- 905
Query: 1356 EIWKLPCFDVSISEKHVTEWKTNYDCYRREMREVLNXXXXXXXXXXXDVIKKYKQMLYEA 1177
EIWKLPCFDV I E +V WK+ Y+ YRREM + L +VIKKYKQ+LYEA
Sbjct: 906 EIWKLPCFDVPIPEIYVKMWKSRYESYRREMTKALKSGNESRNDAADEVIKKYKQLLYEA 965
Query: 1176 PDMEESAKDTQVIYEEAVAIYHVTYNYASMYGVEKCGFAWKVAGSALCSLCAWKSAALNE 997
DMEESAK ++VIY+EA+AIYHVTY+YA +GVEKC FAW++A SALC+LCAWK A E
Sbjct: 966 GDMEESAKSSEVIYDEAIAIYHVTYDYAMEHGVEKCNFAWRIAASALCNLCAWKLAGPRE 1025
Query: 996 KPVTILPSVLRSLL 955
KP+ ILPS+LR LL
Sbjct: 1026 KPLPILPSLLRELL 1039
>ref|XP_011078257.1| PREDICTED: probable RNA-dependent RNA polymerase 5 [Sesamum indicum]
Length = 1036
Score = 1214 bits (3142), Expect = 0.0
Identities = 651/1036 (62%), Positives = 770/1036 (74%), Gaps = 29/1036 (2%)
Frame = -1
Query: 3975 SPHVDVRLPESVEDIIKRVSMEKQTQPLDFNARKLLRDIGEQGSLQILGTVLSSSSPIKT 3796
SP +VRLPE VE II+R+ +EK PL AR +L +IGEQ +L++L TVLSS + I++
Sbjct: 5 SPDQEVRLPEPVEMIIQRICLEKNQPPLKKYARNMLAEIGEQAALEVLTTVLSSKT-IRS 63
Query: 3795 FSGFVSFLVKQKYPIHKSPSSASPLGLRSPSSASPNIARNG---EGLQSPLS-------- 3649
F G+V+FLVK+ +P +++ + S G S SPN + + E L+SP+S
Sbjct: 64 FGGYVAFLVKKDFP-NQAAAVLSAYGSPHQCSTSPNKSPHTPYYERLRSPVSSFSVDSIP 122
Query: 3648 -NLQRTGFQNISCQLSFEDETLESRSCLVRDVSSLSGEHGEMTESVTISPQLLILNKLEY 3472
NL +TG QNI C LSFE+ETLE R S L E EMT+SVTIS QL+IL++L++
Sbjct: 123 SNLNKTGPQNIRCNLSFENETLEKSCPGARCQSPLPDELREMTDSVTISQQLMILSQLQF 182
Query: 3471 RKLFLLLSYIKRNKLEAVLTMDDANEVFSMKHLSMPEFEKNIWARYGRKFCEESDRSQYL 3292
RKLFL+LSYI R KLEAV+ +D ANE++SMK L M +FE IW YG+KFCEESDRSQYL
Sbjct: 183 RKLFLVLSYIGRQKLEAVVNLDGANEIYSMKDLPMNDFEAKIWNSYGKKFCEESDRSQYL 242
Query: 3291 DWDSGKTHFYYCHVSSDGSYYFKGPYLNSLRTHLQRSLGDENVLIVKFSVDGKYS-AEKI 3115
DWDS KTH YYCHV DGSYYFKGPYLNS RTHLQRSLGD+++LIVKF D + +
Sbjct: 243 DWDSQKTHHYYCHVCRDGSYYFKGPYLNSFRTHLQRSLGDDSILIVKFLEDDSNTMGSSV 302
Query: 3114 VEQXXXXXXXXXXXXXFKDERKKVKKNRDWEDKNCTYSDVKSYFVHFDSISTHGNEENYI 2935
VE+ FKDERKKVKK + E K+ TYS VK Y+V DS+ HG EE YI
Sbjct: 303 VEEGILVGLRRYRFFVFKDERKKVKKIQMVEKKS-TYSAVKGYYVRVDSVCPHGYEEGYI 361
Query: 2934 LSRKSVSEARRLFMHIHTLSTLEKYMARFSLILSKTTKLYLDFAAITVDIIEDIPFQDEN 2755
LSRK++SEARRLFMHIHT+ST+EKYMARFSLILSKT KL +DF A+T+ IEDIPF+DEN
Sbjct: 362 LSRKTISEARRLFMHIHTVSTIEKYMARFSLILSKTRKLDIDFKAVTIQRIEDIPFRDEN 421
Query: 2754 GSIIHDEDGKPILHTDGTGYISEDLAMKY---------ITNSS----SEFATFGGTVCQE 2614
SIIHDEDGKPILHTDGTGYIS DLAMK IT++S E T CQ+
Sbjct: 422 DSIIHDEDGKPILHTDGTGYISVDLAMKCPRSFSLANDITDNSFEKYEEIVNIEDTACQK 481
Query: 2613 RGAAARINEPPLLIQCRLFHDGYAVKGTLLLNRKLEPGRIQIRPSMIKVEKDQALQSEET 2434
RGA AR EPPLLIQCRLF+DG AVKGTLL+NRKLEPG IQIRPSMIKVE+DQ L ET
Sbjct: 482 RGAEARNKEPPLLIQCRLFYDGCAVKGTLLINRKLEPGTIQIRPSMIKVERDQKLPLGET 541
Query: 2433 LNSLEIVNISHRPPRNYLSKYLIALLSYGGVPQEFFLNLLSNALNETQNVYSNRRSALRV 2254
SLEIV S RP RN LSKYLIALLSYGGVPQEFF NLL+NAL ET+NVYS+ R+ALRV
Sbjct: 542 FKSLEIVATSRRPGRNALSKYLIALLSYGGVPQEFFCNLLTNALEETRNVYSDTRAALRV 601
Query: 2253 ASLHDGLYWGFEAQRMICSGVPLNEPYLQHCLYNVXXXXXXXXXXXXLPVSESFYLMGTA 2074
AS +DGL G A+RMI SG+PL+EPYLQHCL ++ +PVSESFYLMGTA
Sbjct: 602 ASNYDGLEVGVVARRMISSGIPLSEPYLQHCLSSLESGEKIKLKQGKIPVSESFYLMGTA 661
Query: 2073 DPTGVLNNDEVCVILDSGQISGKVLVYRNPGMHFGDIHVMEAIYVKELEDFVGNAKYGVF 1894
DPTGVL N EVCVILD+GQISGKVLVYRNPGMHFGD+HVMEA+Y +ELE+ VGNAKYG+F
Sbjct: 662 DPTGVLKNHEVCVILDNGQISGKVLVYRNPGMHFGDVHVMEAVYKEELEEVVGNAKYGIF 721
Query: 1893 FSTKGQKSAAYEMATGDFDGDLYWISRNPELLKHFKANEPWRRVYSVP-DAEKRNPQKSS 1717
FSTKG++SAAYEMATGDFDGD+YW+SRNPELLK+FKA+EPW+R YS P D++ RNP++ S
Sbjct: 722 FSTKGKRSAAYEMATGDFDGDMYWVSRNPELLKYFKASEPWKRFYSTPADSKIRNPREFS 781
Query: 1716 N--XXXXXXXXXXEARRPSYSMGIAADSWLAYMDRLLSLGDDRAIEKDSLKRKMIKLIDI 1543
+ EAR PS+SM AADSWL +MDRLL+LGDD A EK SLK+K+I+LIDI
Sbjct: 782 DMELEHELFQLFQEAREPSFSMATAADSWLTFMDRLLTLGDDCASEKLSLKKKIIQLIDI 841
Query: 1542 YYDALDAPKSGKKVDVPNDLRAEMFPHHMGKAPDISYRSSSILGKIYDSVLEFHDEAPPR 1363
YYDALDAPKSGKKV VPN+LRAEM+PHHM + + SY SSSILG+IYD V F ++A P
Sbjct: 842 YYDALDAPKSGKKVKVPNELRAEMYPHHMERGAEFSYNSSSILGRIYDKVQAFKNDAVPG 901
Query: 1362 RQEIWKLPCFDVSISEKHVTEWKTNYDCYRREMREVLNXXXXXXXXXXXDVIKKYKQMLY 1183
+ EIWKLP D I E ++ +WK Y YR EM + DVI KYKQ+LY
Sbjct: 902 K-EIWKLPFLDDPIPELYL-KWKARYKDYREEMTSAMKSSDESKDLAARDVIHKYKQLLY 959
Query: 1182 EAPDMEESAKDTQVIYEEAVAIYHVTYNYASMYGVEKCGFAWKVAGSALCSLCAWKSAAL 1003
EAP MEESAK+T+ IYEE+VAIYHV Y+YA +GV +C FAWKVAGSALC LCAWK A
Sbjct: 960 EAPCMEESAKNTEEIYEESVAIYHVVYDYAMRHGVTRCSFAWKVAGSALCDLCAWKLAGP 1019
Query: 1002 NEKPVTILPSVLRSLL 955
E+P+ ILPSVLR LL
Sbjct: 1020 KEEPIAILPSVLRELL 1035
>gb|AHL27588.1| RNA-dependent RNA polymerase 5 [Salvia miltiorrhiza]
Length = 898
Score = 1129 bits (2920), Expect = 0.0
Identities = 597/894 (66%), Positives = 688/894 (76%), Gaps = 10/894 (1%)
Frame = -1
Query: 4005 MEAKRQKTEHSPHVDVRLPESVEDIIKRVSMEKQTQPLDFNA--RKLLRDIGEQGSLQIL 3832
MEAK+QK + S H DVRLPESVE I+R+++EKQ PL N+ RK+LR+IGEQ SL++L
Sbjct: 1 MEAKKQKMDGSSHEDVRLPESVEAAIERIAVEKQQPPLPRNSDVRKMLREIGEQPSLKLL 60
Query: 3831 GTVLSSSSPIKTFSGFVSFLVKQKYPIHK----SPSSASPLGLRSPSSASPNIARNGEGL 3664
+ SS +PIK+F GFVS LV+ YP SP + P + SPSS SPN+ARNGE L
Sbjct: 61 NIIHSSKTPIKSFGGFVSKLVRTYYPNQAAAIPSPYKSPPPTIYSPSSISPNVARNGESL 120
Query: 3663 QSPLSNLQRTGFQNISCQLSFEDETLESRSCLVRDVSSLSGEHGEMTESVTISPQLLILN 3484
QS LSNLQ TGFQNISCQLSFEDE LESR+ ES+ ISPQLL LN
Sbjct: 121 QSSLSNLQGTGFQNISCQLSFEDEALESRN-----------------ESMAISPQLLTLN 163
Query: 3483 KLEYRKLFLLLSYIKRNKLEAVLTMDDANEVFSMKHLSMPEFEKNIWARYGRKFCEESDR 3304
KLE+RKLFLLLSY KLE VLT ++AN+V++ K L MPEFE+ IW ++G ++C DR
Sbjct: 164 KLEFRKLFLLLSYANGQKLEDVLTTEEANQVYANKALPMPEFERLIWDKFGYRYCNGLDR 223
Query: 3303 SQYLDWDSGKTHFYYCHVSSDGSYYFKGPYLNSLRTHLQRSLGDENVLIVKFSVDGKYSA 3124
SQ+LDWDSGKTH Y CHV+ DGSY FKGPYLNS RTHLQRSLGD+NVL VKF Y A
Sbjct: 224 SQHLDWDSGKTHIYNCHVNPDGSYSFKGPYLNSSRTHLQRSLGDDNVLTVKFLAKEIYPA 283
Query: 3123 EKIVEQXXXXXXXXXXXXXFKDERKKVKKNRDWEDKNCTYSDVKSYFVHFDSISTHGNEE 2944
KIVE+ FKDE+KK KKN+ ED ++S VK YFVH DSIS++ +EE
Sbjct: 284 RKIVEEGLIVGLRRYRFFVFKDEQKKAKKNQA-EDNKSSHSAVKCYFVHLDSISSNDHEE 342
Query: 2943 NYILSRKSVSEARRLFMHIHTLSTLEKYMARFSLILSKTTKLYLDFAAITVDIIEDIPFQ 2764
+Y+L RKSVSEARRLFMHIHTLST+EKYMAR SLILSKTT++ LDFAAI V+IIEDIPFQ
Sbjct: 343 DYVLFRKSVSEARRLFMHIHTLSTIEKYMARLSLILSKTTRIDLDFAAIIVEIIEDIPFQ 402
Query: 2763 DENGSIIHDEDGKPILHTDGTGYISEDLAMKYITNSSSEFATFGGTVCQERGAAARINEP 2584
D+NGSII DEDGKPILHTDGTGYIS+DLAMK S +A+ T
Sbjct: 403 DDNGSIIRDEDGKPILHTDGTGYISQDLAMKC---SKDFYASMHNT---------NSTFE 450
Query: 2583 PLLIQCRLFHDGYAVKGTLLLNRKLEPGRIQIRPSMIKVEKDQALQSEETL--NSLEIVN 2410
PLLIQCRLFHDGYAVKGTLL+NRKLEPGRIQIRPSMIKVEKD +++SEE L NSLEI
Sbjct: 451 PLLIQCRLFHDGYAVKGTLLVNRKLEPGRIQIRPSMIKVEKDHSMESEEILKFNSLEINT 510
Query: 2409 ISHRPPRNYLSKYLIALLSYGGVPQEFFLNLLSNALNETQNVYSNRRSALRVASLHDGLY 2230
IS RP RN+LSKYLI+LLSYGGVPQEFFLNLL AL ETQNVYSNRR ALRVAS HD
Sbjct: 511 ISRRPNRNFLSKYLISLLSYGGVPQEFFLNLLFKALEETQNVYSNRRVALRVASHHDDWD 570
Query: 2229 WGFEAQRMICSGVPLNEPYLQHCLYNVXXXXXXXXXXXXLPVSESFYLMGTADPTGVLNN 2050
G AQRMIC G+PL+EPYLQHCL + +PV ES YLMGTADPTGVL+N
Sbjct: 571 LGLMAQRMICCGIPLDEPYLQHCLSKLESSQKKKLKEGRIPVDESCYLMGTADPTGVLHN 630
Query: 2049 DEVCVILDSGQISGKVLVYRNPGMHFGDIHVMEAIYVKELEDFVGNAKYGVFFSTKGQKS 1870
DEVCVILDSGQISGKVLVYRNPGMHFGDIHVMEA+YVK LE+F+GNAKYG+FFSTKGQ+S
Sbjct: 631 DEVCVILDSGQISGKVLVYRNPGMHFGDIHVMEAVYVKGLEEFIGNAKYGIFFSTKGQRS 690
Query: 1869 AAYEMATGDFDGDLYWISRNPELLKHFKANEPWRRVYSVPDAEKRNPQK--SSNXXXXXX 1696
AAYE+ATGDFDGD YW+SRNPELL FKA+EPW+RVY PDAEKR+P+K SS
Sbjct: 691 AAYEIATGDFDGDTYWVSRNPELLTFFKASEPWKRVYPAPDAEKRDPRKFSSSELERELF 750
Query: 1695 XXXXEARRPSYSMGIAADSWLAYMDRLLSLGDDRAIEKDSLKRKMIKLIDIYYDALDAPK 1516
++R PSY+MG AADSWL YMDRLL+LGDDRA EK+SLK KMIKL+DIYYDALDAPK
Sbjct: 751 QLFLDSRTPSYNMGTAADSWLTYMDRLLTLGDDRAAEKNSLKTKMIKLVDIYYDALDAPK 810
Query: 1515 SGKKVDVPNDLRAEMFPHHMGKAPDISYRSSSILGKIYDSVLEFHDEAPPRRQE 1354
SGKK++VP+DL+AE+FPHHM KA + SY SSSILG+IYD+VLEF+ +A R+ E
Sbjct: 811 SGKKINVPDDLKAELFPHHMEKAIEKSYHSSSILGQIYDNVLEFNSDAVSRKGE 864
>ref|XP_011093632.1| PREDICTED: probable RNA-dependent RNA polymerase 5 [Sesamum indicum]
Length = 1013
Score = 1110 bits (2871), Expect = 0.0
Identities = 593/1029 (57%), Positives = 734/1029 (71%), Gaps = 21/1029 (2%)
Frame = -1
Query: 3975 SPHVDVRLPESVEDIIKRVSMEKQTQPLDFNARKLLRDIGEQGSLQILGTVLSSSSPIKT 3796
SPH + LP S+E I+++ ++ P+ ARKLL DIGE+ + +L + S+ K+
Sbjct: 4 SPHQEAPLPHSIEKTIQKICKDQSQPPISSYARKLLADIGEKAASDLLARI-SNQRITKS 62
Query: 3795 FSGFVSFLVKQKYPIHKSPSSASPLGLRSPSSASPNIARNGEGLQSPLSNLQRTGFQNIS 3616
FSG++ LVK+ +P PSS S L SPSS+SP RN +SPL I
Sbjct: 63 FSGYIITLVKKYHPA-VVPSSPSKRSL-SPSSSSP---RNTSLKKSPLQ---------IG 108
Query: 3615 CQLSFEDETLESRSCLVRDVSSLS-----GEHGEMTESVTISPQLLILNKLEYRKLFLLL 3451
LSFED+ E+R + +S + E MT+S TIS QL IL+KLEYRKLFL+L
Sbjct: 109 RLLSFEDDVQETRGPIFEHQTSTAVELKNSELRGMTKSNTISQQLRILSKLEYRKLFLVL 168
Query: 3450 SYIKRNKLEAVLTMDDANEVFSMKHLSMPEFEKNIWARYGRKFCEESDRSQYLDWDSGKT 3271
SY R+KLE V+T+D AN++F K L M FE IW YG K+C +SDRS+YLDWD GKT
Sbjct: 169 SYTGRHKLENVMTVDGANDIFQKKDLPMSIFETAIWNTYGNKYCNKSDRSEYLDWDFGKT 228
Query: 3270 HFYYCHVSSDGSYYFKGPYLNSLRTHLQRSLGDENVLIVKFSVDGKYSAEKIVEQXXXXX 3091
H YYC+V DGSY+FKGP L+S RTHLQRSLGD+N+LIVKF D Y IVE+
Sbjct: 229 HLYYCYVHEDGSYHFKGPCLSSTRTHLQRSLGDDNILIVKFLEDDMYGVN-IVEEGILVG 287
Query: 3090 XXXXXXXXFKDERKKVKKNRDWEDKNCTYSDVKSYFVHFDSISTHGNEENYILSRKSVSE 2911
FKDERK KKN+ +K + + VK FV DS+ + NYILS KSV E
Sbjct: 288 LRRFRFLVFKDERKGRKKNQIENEKAYSCA-VKCLFVRIDSVDPV-EDNNYILSGKSVGE 345
Query: 2910 ARRLFMHIHTLSTLEKYMARFSLILSKTTKLYLDFAAITVDIIEDIPFQDENGSIIHDED 2731
RRLFMH+HT+ T+EKYMARFSLILSKT KL +DF AITV+ I+DIPF+D++GS+I DED
Sbjct: 346 VRRLFMHVHTVLTMEKYMARFSLILSKTIKLQVDFGAITVETIQDIPFRDDSGSLICDED 405
Query: 2730 GKPILHTDGTGYISEDLAMK---------YITNSS----SEFATFGGTVCQERGAAARIN 2590
GKP+LHTDGTGYISEDLAMK YIT++S EF CQ R A +R
Sbjct: 406 GKPLLHTDGTGYISEDLAMKCPKEFSAAKYITDNSFETYHEFVDIDDASCQTRLAKSRNK 465
Query: 2589 EPPLLIQCRLFHDGYAVKGTLLLNRKLEPGRIQIRPSMIKVEKDQALQSEETLNSLEIVN 2410
E PLL+QCRLF++G AVKGTLL+N+KL+ G IQIRPSMIKVE+D + NSLEIV
Sbjct: 466 EAPLLMQCRLFYNGCAVKGTLLVNKKLKLGEIQIRPSMIKVERDCTAPVQGNFNSLEIVA 525
Query: 2409 ISHRPPRNYLSKYLIALLSYGGVPQEFFLNLLSNALNETQNVYSNRRSALRVASLHDGLY 2230
ISH+P R +LSK LI+LL+YGGVPQ+ FL LL+NAL +TQ VYSNR +ALRVAS HDGL
Sbjct: 526 ISHKPGRTFLSKTLISLLNYGGVPQQVFLELLTNALEDTQKVYSNRHAALRVASNHDGLD 585
Query: 2229 WGFEAQRMICSGVPLNEPYLQHCLYNVXXXXXXXXXXXXLPVSESFYLMGTADPTGVLNN 2050
+G+ AQ MI G+PLNEPYL HCL N+ +PV ESFYLMGTADPTGVL
Sbjct: 586 FGYLAQLMISCGIPLNEPYLNHCLCNLKKDERAKLRKGKVPVGESFYLMGTADPTGVLEY 645
Query: 2049 DEVCVILDSGQISGKVLVYRNPGMHFGDIHVMEAIYVKELEDFVGNAKYGVFFSTKGQKS 1870
D+VCV+LD+GQISGKVLVYRNPG+HFGDIHVMEAIYV++LED++G++KYG+FFSTKG +S
Sbjct: 646 DQVCVVLDNGQISGKVLVYRNPGLHFGDIHVMEAIYVQQLEDYIGDSKYGIFFSTKGGRS 705
Query: 1869 AAYEMATGDFDGDLYWISRNPELLKHFKANEPWRRVYSVPDAEKRNPQK--SSNXXXXXX 1696
A YEMATGDFDGD+YW+SR+ ELLK+FKA+EPW RVYS ++ +NP++ S
Sbjct: 706 APYEMATGDFDGDMYWVSRHHELLKNFKASEPWARVYSTKESNSKNPKELSSEELERELF 765
Query: 1695 XXXXEARRPSYSMGIAADSWLAYMDRLLSLGDDRAIEKDSLKRKMIKLIDIYYDALDAPK 1516
+AR+PS+ M AADSWLA+MDRLL+LGDDR EKD L+ KMI LIDIYYDALDAPK
Sbjct: 766 RLFLQARKPSFEMSTAADSWLAFMDRLLTLGDDRTFEKDCLREKMIHLIDIYYDALDAPK 825
Query: 1515 SGKKVDVPNDLRAEMFPHHMGKAPDISYRSSSILGKIYDSVLEFHDEAPPRRQEIWKLPC 1336
SGK+V++P +LR EM+PHHM + P+ SY S SILG+IYD + EF DE P++ EIWKLPC
Sbjct: 826 SGKRVNLPKELRPEMYPHHMERGPEYSYHSMSILGRIYDMIEEFKDEVVPKK-EIWKLPC 884
Query: 1335 FDVSISEKHVTEWKTNYDCYRREMREVLNXXXXXXXXXXXDVIKKYKQMLYEAPDMEESA 1156
FD+ I E ++ +W+ NY+ YRREM + LN DVIKK K+ LY+APDMEES+
Sbjct: 885 FDIPIPETYIQKWRINYENYRREMAKALNSNYESKKDAANDVIKKNKEFLYDAPDMEESS 944
Query: 1155 KDTQVIYEEAVAIYHVTYNYA-SMYGVEKCGFAWKVAGSALCSLCAWKSAALNEKPVTIL 979
KDT VIY+EA+AIYHVTY+YA SM + KC FAWKV GSALC+L AWK+A EKP+TIL
Sbjct: 945 KDTTVIYKEALAIYHVTYDYAKSMDDIGKCSFAWKVGGSALCNLYAWKTAGPKEKPLTIL 1004
Query: 978 PSVLRSLLN 952
PSV+R +LN
Sbjct: 1005 PSVIREVLN 1013
>gb|EYU30717.1| hypothetical protein MIMGU_mgv1a001145mg [Erythranthe guttata]
Length = 878
Score = 1064 bits (2752), Expect = 0.0
Identities = 537/855 (62%), Positives = 647/855 (75%), Gaps = 1/855 (0%)
Frame = -1
Query: 3516 VTISPQLLILNKLEYRKLFLLLSYIKRNKLEAVLTMDDANEVFSMKHLSMPEFEKNIWAR 3337
+TI+ QL+ LNKLEYRKLFL+LSYI R KLE V+T++DA+E++ M M FE IW +
Sbjct: 62 ITITQQLITLNKLEYRKLFLVLSYIGREKLEDVVTVEDADEIYRMNEFPMQAFENKIWKK 121
Query: 3336 YGRKFCEESDRSQYLDWDSGKTHFYYCHVSSDGSYYFKGPYLNSLRTHLQRSLGDENVLI 3157
YG++F +ESDRSQYLDWDSGKTH YYCHV DG YYFKGPYLNS++THLQRSLGD+N+LI
Sbjct: 122 YGQRFYDESDRSQYLDWDSGKTHVYYCHVYQDGRYYFKGPYLNSMKTHLQRSLGDDNILI 181
Query: 3156 VKFSVDGKYSAEKIVEQXXXXXXXXXXXXXFKDERKKVKKNRDWEDKNCTYSDVKSYFVH 2977
VKF DG + I ++ FKD+RKKV KN+ ++K TYS+V+ +FV
Sbjct: 182 VKFLEDGAFGTGNIAQEGILVGLRRYRFFVFKDDRKKVNKNQSDKEKKATYSNVRCFFVR 241
Query: 2976 FDSISTHGNEENYILSRKSVSEARRLFMHIHTLSTLEKYMARFSLILSKTTKLYLDFAAI 2797
DS+S G +ENYILSRK++ EARR+FMHIHT+S++EK MAR SLILSK+ KL ++ AA+
Sbjct: 242 VDSVSPSGYDENYILSRKTIGEARRMFMHIHTISSIEKCMARLSLILSKSIKLEINLAAV 301
Query: 2796 TVDIIEDIPFQDENGSIIHDEDGKPILHTDGTGYISEDLAMK-YITNSSSEFATFGGTVC 2620
++ I+DIPFQDE G +IHDEDGKPILHTDGTGYISEDLA++ I S+ ++ T
Sbjct: 302 IIEKIKDIPFQDEGGFVIHDEDGKPILHTDGTGYISEDLAIRCQICFSAPKYGTDD---- 357
Query: 2619 QERGAAARINEPPLLIQCRLFHDGYAVKGTLLLNRKLEPGRIQIRPSMIKVEKDQALQSE 2440
PLL+QCR+FH+GYAVKGTLL+NRKLEPG IQIRPSMIKVE+D ++ E
Sbjct: 358 ---------RFEPLLVQCRIFHEGYAVKGTLLVNRKLEPGTIQIRPSMIKVERDHNIKVE 408
Query: 2439 ETLNSLEIVNISHRPPRNYLSKYLIALLSYGGVPQEFFLNLLSNALNETQNVYSNRRSAL 2260
E NSLEIVNISH+P RN LSKYLIALLSYGGVPQEFFLNL++N L + +NVY+NRR+AL
Sbjct: 409 EAFNSLEIVNISHKPGRNCLSKYLIALLSYGGVPQEFFLNLVANTLEDARNVYTNRRAAL 468
Query: 2259 RVASLHDGLYWGFEAQRMICSGVPLNEPYLQHCLYNVXXXXXXXXXXXXLPVSESFYLMG 2080
RVAS H GL +GF AQRMICSGVPL+EPYLQ CL N+ +P++ESFYLMG
Sbjct: 469 RVASNHAGLDYGFLAQRMICSGVPLDEPYLQLCLSNLENGEKTKLKTGKIPLNESFYLMG 528
Query: 2079 TADPTGVLNNDEVCVILDSGQISGKVLVYRNPGMHFGDIHVMEAIYVKELEDFVGNAKYG 1900
TADPTGVLNNDEVCVIL +GQISGKVLVYRNPGMHFGD+HVMEA+YVKELE+FVGNAKYG
Sbjct: 529 TADPTGVLNNDEVCVILGNGQISGKVLVYRNPGMHFGDVHVMEAVYVKELEEFVGNAKYG 588
Query: 1899 VFFSTKGQKSAAYEMATGDFDGDLYWISRNPELLKHFKANEPWRRVYSVPDAEKRNPQKS 1720
VFFSTKG SAAYEMATGDFDGD+YW+SRNPEL NE ++
Sbjct: 589 VFFSTKGATSAAYEMATGDFDGDMYWVSRNPEL-----ENELFQ---------------- 627
Query: 1719 SNXXXXXXXXXXEARRPSYSMGIAADSWLAYMDRLLSLGDDRAIEKDSLKRKMIKLIDIY 1540
EAR PS++M AADSWL +MDRLL+LGDDR EK SL +KMI+L+DIY
Sbjct: 628 ---------LCLEARTPSFNMATAADSWLTFMDRLLTLGDDRTAEKKSLMKKMIRLVDIY 678
Query: 1539 YDALDAPKSGKKVDVPNDLRAEMFPHHMGKAPDISYRSSSILGKIYDSVLEFHDEAPPRR 1360
YDALDAPKSGKKV VP +LRAEM+PHHM K ++SY SSS+LG+IYD V ++ PR+
Sbjct: 679 YDALDAPKSGKKVKVPEELRAEMYPHHMEKGSELSYHSSSVLGQIYDRVDALKNDFVPRK 738
Query: 1359 QEIWKLPCFDVSISEKHVTEWKTNYDCYRREMREVLNXXXXXXXXXXXDVIKKYKQMLYE 1180
EIWKLPCFDV I E +V WK+ Y+ YRREM + L +VIKKYKQ+LYE
Sbjct: 739 -EIWKLPCFDVPIPEIYVKMWKSRYESYRREMTKALKSGNESRNDAADEVIKKYKQLLYE 797
Query: 1179 APDMEESAKDTQVIYEEAVAIYHVTYNYASMYGVEKCGFAWKVAGSALCSLCAWKSAALN 1000
A DMEESAK ++VIY+EA+AIYHVTY+YA +GVEKC FAW++A SALC+LCAWK A
Sbjct: 798 AGDMEESAKSSEVIYDEAIAIYHVTYDYAMEHGVEKCNFAWRIAASALCNLCAWKLAGPR 857
Query: 999 EKPVTILPSVLRSLL 955
EKP+ ILPS+LR LL
Sbjct: 858 EKPLPILPSLLRELL 872
>emb|CDP03267.1| unnamed protein product [Coffea canephora]
Length = 1019
Score = 910 bits (2351), Expect = 0.0
Identities = 505/1025 (49%), Positives = 669/1025 (65%), Gaps = 22/1025 (2%)
Frame = -1
Query: 3960 VRLPESVEDIIKRVSMEKQTQPLDFNARKLLRDIGEQGSLQILGTVLSSSSPIKT-FSGF 3784
V L E VE +I+++ +EKQ P D AR+ L DIGE+ + +I+ + S I+T S +
Sbjct: 13 VSLSEPVERMIEQICIEKQQPPPDHYARQRLFDIGEEKAYEIVRRIYYSEEAIRTTLSRY 72
Query: 3783 VS-FLVKQKYPIHKSPSSASPLGLRSPSSASPNIARNGEGLQSPLSNLQRTGFQNISCQL 3607
++ F + P +S S+ SP AS + + P T F
Sbjct: 73 ITWFTDSPQSPFRQSSSTPSPRTPPPQLHASSSPPKRALHFPPP----PPTCFSQC---- 124
Query: 3606 SFEDETLESRSCLVRDVSSLSGEHGEMTESVTISPQLLILNKLEYRKLFLLLSYIKR--- 3436
DE+ S + S L T + QL +L++LE+RK FLL SYI R
Sbjct: 125 ---DESPCSPMSKLNMSSPLPHPESARPSQTTHNYQLTVLSQLEFRKFFLLYSYIGRLVL 181
Query: 3435 NKLEAVLTMDDANEVFSMKHLSMPEFEKNIWARYGRKFCEESDRSQYLDWDSGKTHFYYC 3256
+KLE V+T ++AN++ MK+L M +E IW G++ C SDR + +DWDSGKTHFYYC
Sbjct: 182 SKLEEVITTENANKILEMKNLPMGVYESCIWDMCGKQLCAPSDRIEVIDWDSGKTHFYYC 241
Query: 3255 HVSSDGSYYFKGPYLNSLRTHLQRSLGDENVLIVKFSVDGKYSAEKIVEQXXXXXXXXXX 3076
HV DGSY FKGPYL ++RTHLQR+LGD+NVLIV+F DGK ++++I+E
Sbjct: 242 HVYEDGSYCFKGPYLKTIRTHLQRALGDDNVLIVRFVDDGKCNSDRIIEDGIIVGLRRYR 301
Query: 3075 XXXFKDERKKVKKNRDWEDKNCTYSDV--KSYFVHFDSISTHGNEENYILSRKSVSEARR 2902
FKDE K KK + +KN T K YFV FDSI+T G +E Y+LS V+EARR
Sbjct: 302 FFAFKDECKDAKKKKKGLEKNKTPLSAFPKCYFVRFDSIATSGTDEPYLLSSLEVNEARR 361
Query: 2901 LFMHIHTLSTLEKYMARFSLILSKTTKLYLDFAAITVD-IIEDIPFQDENGSIIHDEDGK 2725
LFM ++++S++ KY+ARFSLILSKT KL +D +++ +D I+DI +D N I D++G+
Sbjct: 362 LFMDVNSISSMAKYIARFSLILSKTIKLPVDLSSVVIDDTIQDIECRDGNNRPIKDDNGE 421
Query: 2724 PILHTDGTGYISEDLAMK---------YITNSS-SEFATFGGTV---CQERGAAARINEP 2584
P++HTDGTG+ISEDLA+K YI + +F F G V RG AR +P
Sbjct: 422 PLIHTDGTGFISEDLALKCPQDFGRAQYIKDKDFQKFHNFVGFVDAPFDVRGTEARNRDP 481
Query: 2583 PLLIQCRLFHDGYAVKGTLLLNRKLEPGRIQIRPSMIKVEKDQALQSEETLNSLEIVNIS 2404
PLL+QCRLF G AVKGTLL+N+KL+ G IQIRPSMIKV+KD+ +T +SLEIV +S
Sbjct: 482 PLLMQCRLFSQGLAVKGTLLVNKKLKAGTIQIRPSMIKVQKDREGPIGQTFDSLEIVAVS 541
Query: 2403 HRPPRNYLSKYLIALLSYGGVPQEFFLNLLSNALNETQNVYSNRRSALRVASLHDGLYWG 2224
HRP R +LSKYLIALLSYGGVP+ FF++L+++ L ET V++++R+A +VA +G Y
Sbjct: 542 HRPRRCHLSKYLIALLSYGGVPRTFFVDLMTSVLEETNAVFTDKRAAFKVALHQEGFYDA 601
Query: 2223 FEAQRMICSGVPLNEPYLQHCLYNVXXXXXXXXXXXXLPVSESFYLMGTADPTGVLNNDE 2044
A R++ +G+PLNEP+LQ L + +P+SESFYLMGTADPTG+L +E
Sbjct: 602 GGALRLLLAGIPLNEPHLQKRLSELANNERTLLKEGKIPISESFYLMGTADPTGLLKENE 661
Query: 2043 VCVILDSGQISGKVLVYRNPGMHFGDIHVMEAIYVKELEDFVGNAKYGVFFSTKGQKSAA 1864
VCV+LD+GQ+SGKVL+YRNPG+HFGD+HV+EA+YV LED +GNAKYG+FFSTKG++S A
Sbjct: 662 VCVVLDNGQVSGKVLLYRNPGLHFGDVHVLEAVYVPALEDIIGNAKYGIFFSTKGRRSVA 721
Query: 1863 YEMATGDFDGDLYWISRNPELLKHFKANEPWRRVYSVPDAEKRNPQKSSNXXXXXXXXXX 1684
E+A GDFDGD+YW+SRNP+LLK+F A+ PW RVY AE++NP + S
Sbjct: 722 SEIANGDFDGDMYWVSRNPQLLKYFSASPPWTRVYPSLRAERKNPNEYSAEQLEHELFRH 781
Query: 1683 EARRPSYSMGIAADSWLAYMDRLLSLGDDRAIEKDSLKRKMIKLIDIYYDALDAPKSGKK 1504
++PSY+M +AADSWLA+MDRLL LGDD A EKD+LK M+KLIDIYYDALDAPK G K
Sbjct: 782 FLKKPSYNMAVAADSWLAFMDRLLILGDDNAKEKDALKENMLKLIDIYYDALDAPKRGTK 841
Query: 1503 VDVPNDLRAEMFPHHMGKAPDISYRSSSILGKIYDSVLEFHDEAPPRRQEIWKLPCFDVS 1324
V VP +L+AE FPH+MGK D SYRS+S+LG IYD F E R I KLPCFDV
Sbjct: 842 VIVPEELKAERFPHYMGK--DGSYRSTSVLGDIYDRAEAFQSE--QRCIAIEKLPCFDVE 897
Query: 1323 ISEKHVTEWKTNYDCYRREMREVLNXXXXXXXXXXXDVIKKYKQMLYEAPDMEESAKDTQ 1144
+ + +++ W+ Y+ YR+EM L DVIKKYK++LYEA + EES KD Q
Sbjct: 898 VPQNYLSSWRGRYNEYRKEMNVALQKDDESRNDAADDVIKKYKRLLYEAAEFEESKKDVQ 957
Query: 1143 VIYEEAVAIYHVTYNYA-SMYGVEKCGFAWKVAGSALCSLCAWKSAALNEKPVTILPSVL 967
I++EA+A+Y VTY+YA S KCGFAWK AGSAL S A NE+ V + PS L
Sbjct: 958 EIHKEALALYQVTYDYAISTKDAGKCGFAWKAAGSALLSYFA---TGRNERLVPVSPSAL 1014
Query: 966 RSLLN 952
R L +
Sbjct: 1015 RELFS 1019
>ref|XP_009780069.1| PREDICTED: probable RNA-dependent RNA polymerase 3 isoform X1
[Nicotiana sylvestris]
Length = 1023
Score = 871 bits (2250), Expect = 0.0
Identities = 489/1028 (47%), Positives = 654/1028 (63%), Gaps = 24/1028 (2%)
Frame = -1
Query: 3966 VDVRLPESVEDIIKRVSMEKQTQPLDFNARKLLRDIGEQGSLQILGTVLSSSSPIKTFSG 3787
++ LP S+E +++++ E+ +P D R+ L IGEQGSL IL ++S+ + KT S
Sbjct: 19 LEAPLPSSIEAMLRKICSEQCQEPPDAGIRRRLGSIGEQGSLAIL-RIISTRAIRKTLSA 77
Query: 3786 FVSFLVKQKYPIHKSPSSASPLGLRSPSSA-SPNIAR-NGEGLQSPLSNL------QRTG 3631
F+ +L+ + S ASP SPS +P R GE P + Q
Sbjct: 78 FLVYLMDRYPDCLSSSPFASPQKRTSPSLLPTPESKRVQGESSSKPKPKIGSSPCVQFAS 137
Query: 3630 FQNISCQLSFEDETLESRSCLVRDVSSLSGEHGEMTESVTISPQLLILNKLEYRKLFLLL 3451
Q + QLSF DE +C T S+ IS QL+IL +LE+RKLFL+L
Sbjct: 138 PQRVIRQLSFGDEPSPESNC--------------RTPSLNISQQLMILGELEFRKLFLVL 183
Query: 3450 SYIKRNKLEAVLTMDDANEVFSMKHLSMPEFEKNIWARYGRKFCEESDRSQYLDWDSGKT 3271
SYI KLE V++ A+++ K L M +FE IW +G+ ESDRS+YLDWD GKT
Sbjct: 184 SYIGSKKLEDVISPKIADDIVRKKTLPMTDFESEIWNAFGKACYTESDRSKYLDWDCGKT 243
Query: 3270 HFYYCHVSSDGSYYFKGPYLNSLRTHLQRSLGDENVLIVKFSVDGKYSAEKIVEQXXXXX 3091
H YYCH+ +G FKGPYLN+ RTHLQR+LGDENVLIVKF V+ A IVE+
Sbjct: 244 HLYYCHIKQNGYCTFKGPYLNTTRTHLQRALGDENVLIVKF-VEDACCANIIVEEGILVG 302
Query: 3090 XXXXXXXXFKDERKKVKKNRDWEDKNCTYSDVKSYFVHFDSISTHGNEENYILSRKSVSE 2911
+KD++++ K + K + +K YFV F+SI T+ + +Y+ + + SE
Sbjct: 303 FRRYRFFVYKDDKERKKTPAIMKTKTAS---LKCYFVRFESIETYNHGGSYVFAGRRTSE 359
Query: 2910 ARRLFMHIHTLSTLEKYMARFSLILSKTTKLYLDFAAITVDIIEDIPFQDENGSIIHDED 2731
AR FMH+H +S + KY AR SLILSKT KL ++ A++T++ +EDI +DE+G II DED
Sbjct: 360 ARCHFMHVHMVSNMAKYAARLSLILSKTIKLQVNLASVTIERVEDILCRDESGCIICDED 419
Query: 2730 GKPILHTDGTGYISEDLAMK---------YITNSSSE----FATFGGTVCQERGAAARIN 2590
G+P +HTDGTG+ISEDLAM+ YI + + E + + RG +
Sbjct: 420 GEPCIHTDGTGFISEDLAMRCPKDFSKAEYIKDENYENFVDIVDLEDMIAERRGNGSLNK 479
Query: 2589 EPPLLIQCRLFHDGYAVKGTLLLNRKLEPGRIQIRPSMIKVEKDQALQSEETLNSLEIVN 2410
EPPLL+QCRL+ +G AVKGT L+NRK+ +IQIRPSM+KVE D + S T NSLE+V
Sbjct: 480 EPPLLMQCRLYKNGCAVKGTFLINRKIGSRKIQIRPSMVKVETDPTISSLPTFNSLEVVA 539
Query: 2409 ISHRPPRNYLSKYLIALLSYGGVPQEFFLNLLSNALNETQNVYSNRRSALRVASLHDGLY 2230
IS+RP + YLSK+LI+LLSYGGV +EFF+ +L +AL ET+ VY +R+AL+VA + +
Sbjct: 540 ISNRPRKTYLSKHLISLLSYGGVGREFFMEILGSALEETKQVYLKKRAALKVAINYREMD 599
Query: 2229 WGFEAQRMICSGVPLNEPYLQHCLYNVXXXXXXXXXXXXLPVSESFYLMGTADPTGVLNN 2050
A RMI SGVPLNEP+L L + LP+S+SFYLMGTADPTGVL N
Sbjct: 600 DDCLAARMISSGVPLNEPHLHARLSRLAKIERSKLRGGKLPLSDSFYLMGTADPTGVLEN 659
Query: 2049 DEVCVILDSGQISGKVLVYRNPGMHFGDIHVMEAIYVKELEDFVGNAKYGVFFSTKGQKS 1870
+EVCVILDSGQ+SG+VLVYRNPG+HFGD+HVM+A YV+EL D VG+AKYG+ FSTKG +S
Sbjct: 660 NEVCVILDSGQVSGRVLVYRNPGLHFGDVHVMKARYVEELVDIVGDAKYGIVFSTKGPRS 719
Query: 1869 AAYEMATGDFDGDLYWISRNPELLKHFKANEPWRRVYSVPDAEKRNPQKSS--NXXXXXX 1696
AA E+A GDFDGD+YW+S N +L+ ++A++PW R +S P A + P + S
Sbjct: 720 AASEIANGDFDGDMYWVSINRKLVDSYRASKPWTRTHSTPKAVSKKPTEFSADELEYELF 779
Query: 1695 XXXXEARRPSYSMGIAADSWLAYMDRLLSLGDDRAIEKDSLKRKMIKLIDIYYDALDAPK 1516
A+ SM +AADSWLA+MDRLL L DD A SLK KM+ LIDIYYDALDAPK
Sbjct: 780 RQFLRAKSKGASMSVAADSWLAFMDRLLMLRDDDADGMHSLKGKMLHLIDIYYDALDAPK 839
Query: 1515 SGKKVDVPNDLRAEMFPHHMGKAPDISYRSSSILGKIYDSVLEFHDEAPPRRQEIWKLPC 1336
SGKKV +P+DL+A FPH+M + SY S+SILG+IYD V + DE EI KLPC
Sbjct: 840 SGKKVSIPHDLKANRFPHYMERGNPFSYHSTSILGQIYDYVDSYPDE-DLCITEISKLPC 898
Query: 1335 FDVSISEKHVTEWKTNYDCYRREMREVLNXXXXXXXXXXXDVIKKYKQMLYEAPDMEESA 1156
FDV I ++ T W+ Y+ Y+++M +N +VIKKYK++LY AP+ E+S
Sbjct: 899 FDVEIPDECTTLWRERYEEYKKDMTMAMNSGCEVKNSACNEVIKKYKKLLYGAPEFEQSV 958
Query: 1155 KDTQVIYEEAVAIYHVTYNYASM-YGVEKCGFAWKVAGSALCSLCAWKSAALNEKPVTIL 979
+ T+ I+ EA+A+YHVTY+ A + Y +EKCGFAWKVAGSALC + A E IL
Sbjct: 959 RKTEDIFNEALALYHVTYDNARITYSIEKCGFAWKVAGSALCRIHAMYQ---KENAFPIL 1015
Query: 978 PSVLRSLL 955
PS+L+ +L
Sbjct: 1016 PSILQDIL 1023
>ref|XP_009780070.1| PREDICTED: probable RNA-dependent RNA polymerase 3 isoform X2
[Nicotiana sylvestris]
Length = 1021
Score = 864 bits (2232), Expect = 0.0
Identities = 488/1028 (47%), Positives = 652/1028 (63%), Gaps = 24/1028 (2%)
Frame = -1
Query: 3966 VDVRLPESVEDIIKRVSMEKQTQPLDFNARKLLRDIGEQGSLQILGTVLSSSSPIKTFSG 3787
++ LP S+E +++++ E+ +P D R+ L IGEQGSL IL ++S+ + KT S
Sbjct: 19 LEAPLPSSIEAMLRKICSEQCQEPPDAGIRRRLGSIGEQGSLAIL-RIISTRAIRKTLSA 77
Query: 3786 FVSFLVKQKYPIHKSPSSASPLGLRSPSSA-SPNIAR-NGEGLQSPLSNL------QRTG 3631
F+ +L+ + S ASP SPS +P R GE P + Q
Sbjct: 78 FLVYLMDRYPDCLSSSPFASPQKRTSPSLLPTPESKRVQGESSSKPKPKIGSSPCVQFAS 137
Query: 3630 FQNISCQLSFEDETLESRSCLVRDVSSLSGEHGEMTESVTISPQLLILNKLEYRKLFLLL 3451
Q + QLSF DE +C T S+ IS QL+IL +LE+RKLFL+L
Sbjct: 138 PQRVIRQLSFGDEPSPESNC--------------RTPSLNISQQLMILGELEFRKLFLVL 183
Query: 3450 SYIKRNKLEAVLTMDDANEVFSMKHLSMPEFEKNIWARYGRKFCEESDRSQYLDWDSGKT 3271
SYI KLE V++ A+++ K L M +FE IW +G+ ESDRS+YLDWD GKT
Sbjct: 184 SYIGSKKLEDVISPKIADDIVRKKTLPMTDFESEIWNAFGKACYTESDRSKYLDWDCGKT 243
Query: 3270 HFYYCHVSSDGSYYFKGPYLNSLRTHLQRSLGDENVLIVKFSVDGKYSAEKIVEQXXXXX 3091
H YYCH+ +G FKGPYLN+ RTHLQR+LGDENVLIVKF V+ A IVE+
Sbjct: 244 HLYYCHIKQNGYCTFKGPYLNTTRTHLQRALGDENVLIVKF-VEDACCANIIVEEGILVG 302
Query: 3090 XXXXXXXXFKDERKKVKKNRDWEDKNCTYSDVKSYFVHFDSISTHGNEENYILSRKSVSE 2911
+KD++++ K + K + +K YFV F+SI T+ + +Y+ + + SE
Sbjct: 303 FRRYRFFVYKDDKERKKTPAIMKTKTAS---LKCYFVRFESIETYNHGGSYVFAGRRTSE 359
Query: 2910 ARRLFMHIHTLSTLEKYMARFSLILSKTTKLYLDFAAITVDIIEDIPFQDENGSIIHDED 2731
AR FMH+H +S + KY AR SLILSKT KL ++ A++T++ +EDI +DE+G II DED
Sbjct: 360 ARCHFMHVHMVSNMAKYAARLSLILSKTIKLQVNLASVTIERVEDILCRDESGCIICDED 419
Query: 2730 GKPILHTDGTGYISEDLAMK---------YITNSSSE----FATFGGTVCQERGAAARIN 2590
G+P +HTDGTG+ISEDLAM+ YI + + E + + RG +
Sbjct: 420 GEPCIHTDGTGFISEDLAMRCPKDFSKAEYIKDENYENFVDIVDLEDMIAERRGNGSLNK 479
Query: 2589 EPPLLIQCRLFHDGYAVKGTLLLNRKLEPGRIQIRPSMIKVEKDQALQSEETLNSLEIVN 2410
EPPLL+QCRL+ +G AVKGT L+NRK+ +IQIRPSM+KVE D + S T NSLE+V
Sbjct: 480 EPPLLMQCRLYKNGCAVKGTFLINRKIGSRKIQIRPSMVKVETDPTISSLPTFNSLEVVA 539
Query: 2409 ISHRPPRNYLSKYLIALLSYGGVPQEFFLNLLSNALNETQNVYSNRRSALRVASLHDGLY 2230
I RP + YLSK+LI+LLSYGGV +EFF+ +L +AL ET+ VY +R+AL+VA + +
Sbjct: 540 I--RPRKTYLSKHLISLLSYGGVGREFFMEILGSALEETKQVYLKKRAALKVAINYREMD 597
Query: 2229 WGFEAQRMICSGVPLNEPYLQHCLYNVXXXXXXXXXXXXLPVSESFYLMGTADPTGVLNN 2050
A RMI SGVPLNEP+L L + LP+S+SFYLMGTADPTGVL N
Sbjct: 598 DDCLAARMISSGVPLNEPHLHARLSRLAKIERSKLRGGKLPLSDSFYLMGTADPTGVLEN 657
Query: 2049 DEVCVILDSGQISGKVLVYRNPGMHFGDIHVMEAIYVKELEDFVGNAKYGVFFSTKGQKS 1870
+EVCVILDSGQ+SG+VLVYRNPG+HFGD+HVM+A YV+EL D VG+AKYG+ FSTKG +S
Sbjct: 658 NEVCVILDSGQVSGRVLVYRNPGLHFGDVHVMKARYVEELVDIVGDAKYGIVFSTKGPRS 717
Query: 1869 AAYEMATGDFDGDLYWISRNPELLKHFKANEPWRRVYSVPDAEKRNPQKSS--NXXXXXX 1696
AA E+A GDFDGD+YW+S N +L+ ++A++PW R +S P A + P + S
Sbjct: 718 AASEIANGDFDGDMYWVSINRKLVDSYRASKPWTRTHSTPKAVSKKPTEFSADELEYELF 777
Query: 1695 XXXXEARRPSYSMGIAADSWLAYMDRLLSLGDDRAIEKDSLKRKMIKLIDIYYDALDAPK 1516
A+ SM +AADSWLA+MDRLL L DD A SLK KM+ LIDIYYDALDAPK
Sbjct: 778 RQFLRAKSKGASMSVAADSWLAFMDRLLMLRDDDADGMHSLKGKMLHLIDIYYDALDAPK 837
Query: 1515 SGKKVDVPNDLRAEMFPHHMGKAPDISYRSSSILGKIYDSVLEFHDEAPPRRQEIWKLPC 1336
SGKKV +P+DL+A FPH+M + SY S+SILG+IYD V + DE EI KLPC
Sbjct: 838 SGKKVSIPHDLKANRFPHYMERGNPFSYHSTSILGQIYDYVDSYPDE-DLCITEISKLPC 896
Query: 1335 FDVSISEKHVTEWKTNYDCYRREMREVLNXXXXXXXXXXXDVIKKYKQMLYEAPDMEESA 1156
FDV I ++ T W+ Y+ Y+++M +N +VIKKYK++LY AP+ E+S
Sbjct: 897 FDVEIPDECTTLWRERYEEYKKDMTMAMNSGCEVKNSACNEVIKKYKKLLYGAPEFEQSV 956
Query: 1155 KDTQVIYEEAVAIYHVTYNYASM-YGVEKCGFAWKVAGSALCSLCAWKSAALNEKPVTIL 979
+ T+ I+ EA+A+YHVTY+ A + Y +EKCGFAWKVAGSALC + A E IL
Sbjct: 957 RKTEDIFNEALALYHVTYDNARITYSIEKCGFAWKVAGSALCRIHAMYQ---KENAFPIL 1013
Query: 978 PSVLRSLL 955
PS+L+ +L
Sbjct: 1014 PSILQDIL 1021
>ref|XP_009592436.1| PREDICTED: probable RNA-dependent RNA polymerase 3 isoform X1
[Nicotiana tomentosiformis]
Length = 1020
Score = 861 bits (2224), Expect = 0.0
Identities = 488/1029 (47%), Positives = 649/1029 (63%), Gaps = 25/1029 (2%)
Frame = -1
Query: 3966 VDVRLPESVEDIIKRVSMEKQTQPLDFNARKLLRDIGEQGSLQILGTVLSSSSPI-KTFS 3790
++ LP SVE +++++ E+ +P D R+ L IGEQGSL IL + SS PI KT S
Sbjct: 16 LEAPLPSSVEAMLRKICSEQCQEPPDVGIRRRLGSIGEQGSLTILRII--SSRPIRKTLS 73
Query: 3789 GFVSFLVKQKYPIHKSPSSASPLGLRSPSSA-SPNIAR-NGEGLQSPLSNL------QRT 3634
F+ +L+ + S ASP SPS +P R GE P + Q
Sbjct: 74 AFLVYLMDRYPDCLSSSPFASPQKRTSPSLLPTPESKRVQGESSTKPKPKIGSSPCVQFA 133
Query: 3633 GFQNISCQLSFEDETLESRSCLVRDVSSLSGEHGEMTESVTISPQLLILNKLEYRKLFLL 3454
+ QLSF DE +C T IS QL+IL++LE+RKLFL+
Sbjct: 134 SPHRVVRQLSFRDEPSPESNC--------------RTPPPNISQQLMILSELEFRKLFLV 179
Query: 3453 LSYIKRNKLEAVLTMDDANEVFSMKHLSMPEFEKNIWARYGRKFCEESDRSQYLDWDSGK 3274
LSYI LE V++ A+++ K L M +FE IW +G+ ESDRS+YLDWD GK
Sbjct: 180 LSYIGSKTLEDVISPKIADDIVRKKTLPMTDFESEIWNAFGKACYAESDRSKYLDWDCGK 239
Query: 3273 THFYYCHVSSDGSYYFKGPYLNSLRTHLQRSLGDENVLIVKFSVDGKYSAEKIVEQXXXX 3094
TH YYCH+ +G FKGPYLN+ RTHLQR+LGDENVLIVKF V+ A IVE+
Sbjct: 240 THLYYCHIKQNGYCTFKGPYLNTTRTHLQRALGDENVLIVKF-VEDACCANIIVEEGILV 298
Query: 3093 XXXXXXXXXFKDERKKVKKNRDWEDKNCTYSDVKSYFVHFDSISTHGNEENYILSRKSVS 2914
+KD++++ K + K + +K YFV F+SI T+ + +Y+ + K S
Sbjct: 299 GFRRYRFFVYKDDKERKKTPAIMKTKTAS---LKCYFVRFESIETYNHGGSYVFAAKRTS 355
Query: 2913 EARRLFMHIHTLSTLEKYMARFSLILSKTTKLYLDFAAITVDIIEDIPFQDENGSIIHDE 2734
EAR FMH+H +S + KY AR SLILSKT KL ++ A++T++ +EDI +DE+G II DE
Sbjct: 356 EARCHFMHVHMVSNMAKYAARLSLILSKTIKLQVNLASVTIERVEDILCRDESGCIICDE 415
Query: 2733 DGKPILHTDGTGYISEDLAMK---------YITNSSSE----FATFGGTVCQERGAAARI 2593
DG+P +HTDGTG+ISEDLAM+ YI + + E + + RG +
Sbjct: 416 DGEPRIHTDGTGFISEDLAMRCPKDFSKAEYIKDENYENFVDIVDLEDMIAERRGNGSLN 475
Query: 2592 NEPPLLIQCRLFHDGYAVKGTLLLNRKLEPGRIQIRPSMIKVEKDQALQSEETLNSLEIV 2413
EPPLL+QCRLF +G AVKGT L+NRK+ +IQIRPSM+KVE D + + T NSLE+V
Sbjct: 476 KEPPLLMQCRLFKNGCAVKGTFLVNRKIGSRKIQIRPSMVKVETDPTISALPTFNSLEVV 535
Query: 2412 NISHRPPRNYLSKYLIALLSYGGVPQEFFLNLLSNALNETQNVYSNRRSALRVASLHDGL 2233
ISHRP + YLSK+LI+LLSYGGV EFF+ +L +AL ET+ VY +R+AL+VA + +
Sbjct: 536 AISHRPRKTYLSKHLISLLSYGGVGNEFFMEILGSALEETKQVYLKKRAALKVAINYREM 595
Query: 2232 YWGFEAQRMICSGVPLNEPYLQHCLYNVXXXXXXXXXXXXLPVSESFYLMGTADPTGVLN 2053
A R+I SGVPLNEP+L L + LP+S+SFYLMGTADPTGVL
Sbjct: 596 DDDCLAARLISSGVPLNEPHLHARLSRLAKIERSKLRGGKLPLSDSFYLMGTADPTGVLE 655
Query: 2052 NDEVCVILDSGQISGKVLVYRNPGMHFGDIHVMEAIYVKELEDFVGNAKYGVFFSTKGQK 1873
N+EVCVILDSGQ+SG+VLVYRNPG+HFGD+HVM+A YV+EL D VG+AKYG+FFSTKG +
Sbjct: 656 NNEVCVILDSGQVSGRVLVYRNPGLHFGDVHVMKARYVEELVDIVGDAKYGIFFSTKGPR 715
Query: 1872 SAAYEMATGDFDGDLYWISRNPELLKHFKANEPWRRVYSVPDAEKRNPQKSS--NXXXXX 1699
SAA E+A GDFDGD+YW+S N +L+ ++A++PW R++S P A + P + S
Sbjct: 716 SAASEIANGDFDGDMYWVSINRKLVDSYRASKPWTRMHSTPKAVSKKPTEFSADELEYEL 775
Query: 1698 XXXXXEARRPSYSMGIAADSWLAYMDRLLSLGDDRAIEKDSLKRKMIKLIDIYYDALDAP 1519
A+ SM +AADSWLA+MD LL L DD SLK K++ LIDIYYDALDAP
Sbjct: 776 FRQFLGAKSKGASMSVAADSWLAFMDLLLMLRDDDVDGMHSLKGKILHLIDIYYDALDAP 835
Query: 1518 KSGKKVDVPNDLRAEMFPHHMGKAPDISYRSSSILGKIYDSVLEFHDEAPPRRQEIWKLP 1339
KSGKKV +P+DL+A FPH+M + SY S+SILG+IYD V + DE EI KLP
Sbjct: 836 KSGKKVSIPHDLKANRFPHYMERGNPFSYHSTSILGQIYDYVDSYPDE-DLCITEISKLP 894
Query: 1338 CFDVSISEKHVTEWKTNYDCYRREMREVLNXXXXXXXXXXXDVIKKYKQMLYEAPDMEES 1159
CFDV I ++ + W Y+ Y+++M +N +VIKKYK++LY AP+ E+S
Sbjct: 895 CFDVEIPDECMALWGERYEEYKKDMTMAMNSGCEVKNSACNEVIKKYKKLLYGAPEFEQS 954
Query: 1158 AKDTQVIYEEAVAIYHVTYNYASM-YGVEKCGFAWKVAGSALCSLCAWKSAALNEKPVTI 982
+ T+ I+ EA+A+YHVTY+ A + Y +EKCGFAWKVAGSALC + A E I
Sbjct: 955 VRKTKDIFNEALALYHVTYDNARITYSIEKCGFAWKVAGSALCRIHAMYH---KENAFPI 1011
Query: 981 LPSVLRSLL 955
LPS+L+ +L
Sbjct: 1012 LPSILQDIL 1020
>ref|XP_010322170.1| PREDICTED: probable RNA-dependent RNA polymerase 3 [Solanum
lycopersicum] gi|723706114|ref|XP_010322171.1| PREDICTED:
probable RNA-dependent RNA polymerase 3 [Solanum
lycopersicum]
Length = 1014
Score = 852 bits (2200), Expect = 0.0
Identities = 486/1031 (47%), Positives = 659/1031 (63%), Gaps = 27/1031 (2%)
Frame = -1
Query: 3966 VDVRLPESVEDIIKRVSMEKQTQPLDFNARKLLRDIGEQGSLQILGTVLSSSSPIK-TFS 3790
+D LP SVE ++ R+ E+ +P R+ L IGE+GSL++L + S PIK + S
Sbjct: 12 LDAPLPYSVETMLDRICKEQGQKPPCTGIRRRLSSIGEKGSLEMLKII--SRRPIKKSLS 69
Query: 3789 GFVSFLVKQKYPIHKSPSSASPLGLRSPSSASPNIARNGEG--LQSPLSNLQRTGFQNIS 3616
F+ +++ +YP S SS+SP S+SP + + EG LQ S+ + ++
Sbjct: 70 AFLVYMI-DRYPDCLS-SSSSPFNCLLKRSSSPRLFPSPEGKRLQGESSSKSKLEMGLLA 127
Query: 3615 C--------QLSFEDETLESRSCLVRDVSSLSGEHGEMTESVTISPQLLILNKLEYRKLF 3460
C QLSF +E E S +S QL+ILN+LE+RKLF
Sbjct: 128 CASPQKVARQLSFCEEP----------------ESNCRRTSPYVSQQLMILNELEFRKLF 171
Query: 3459 LLLSYIKRNKLEAVLTMDDANEVFSMKHLSMPEFEKNIWARYGRKFCEESDRSQYLDWDS 3280
L+LSYI NKLE V++ A+++ K+LSM +FE IW +G+ SDRS+YLDW+
Sbjct: 172 LVLSYIGCNKLEDVISPQIADDIVRKKNLSMTDFESEIWNAFGKACYAVSDRSKYLDWNC 231
Query: 3279 GKTHFYYCHVSSDGSYYFKGPYLNSLRTHLQRSLGDENVLIVKFSVDGKYSAEKIVEQXX 3100
KTH YYCH+ +G FKGPYLN+LRTHLQR+LGD+NVLIVKF V+ A I+E+
Sbjct: 232 RKTHIYYCHIKQNGYCSFKGPYLNTLRTHLQRALGDDNVLIVKF-VEDTSCANIILEEGI 290
Query: 3099 XXXXXXXXXXXFKDERKKVKKNRDWEDKNCTYSDVKSYFVHFDSISTHGNEENYILSRKS 2920
+KD++++ K + K + +K YFV F+SI T + E+Y+ S K+
Sbjct: 291 LVGLRRYRFFVYKDDKERKKSPAMMKTKTAS---LKCYFVRFESIGTCNDGESYVFSTKT 347
Query: 2919 VSEARRLFMHIHTLSTLEKYMARFSLILSKTTKLYLDFAAITVDIIEDIPFQDENGSIIH 2740
+S+AR FMH+H +S + KY AR SLILSKT KL D ++T++ IEDI +DENG II
Sbjct: 348 ISQARCKFMHVHMVSNMAKYAARLSLILSKTIKLQTDLDSVTIERIEDILCRDENGCIIQ 407
Query: 2739 DEDGKPILHTDGTGYISEDLAM---------KYITNSSSE----FATFGGTVCQERGAAA 2599
DEDG+P +HTDGTG+ISEDLAM +YI + + E + R + +
Sbjct: 408 DEDGEPRIHTDGTGFISEDLAMHCPKDFSKAEYIKDENYENFVDIVDLDDVNVERRVSVS 467
Query: 2598 RINEPPLLIQCRLFHDGYAVKGTLLLNRKLEPGRIQIRPSMIKVEKDQALQSEETLNSLE 2419
R +PPLL+QCRLF +G AVKGT L+NRK+ +I IRPSM+KVE D + S T +SLE
Sbjct: 468 RNRKPPLLMQCRLFFNGCAVKGTFLVNRKIGSRKIHIRPSMVKVEIDPTISSIPTFDSLE 527
Query: 2418 IVNISHRPPRNYLSKYLIALLSYGGVPQEFFLNLLSNALNETQNVYSNRRSALRVASLHD 2239
IV ISHRP + YLSK LI+LLSYGGV +E+F+ LL +AL ET+ VY +R+AL+VA +
Sbjct: 528 IVAISHRPNKAYLSKNLISLLSYGGVHKEYFMELLGSALEETKQVYLRKRAALKVAINYR 587
Query: 2238 GLYWGFEAQRMICSGVPLNEPYLQHCLYNVXXXXXXXXXXXXLPVSESFYLMGTADPTGV 2059
+ RMI SG+PLNEP+L L + LP+S+SFYLMGTADPTGV
Sbjct: 588 EMDDECLTARMISSGIPLNEPHLHARLSRLAKIERTKLRGGKLPISDSFYLMGTADPTGV 647
Query: 2058 LNNDEVCVILDSGQISGKVLVYRNPGMHFGDIHVMEAIYVKELEDFVGNAKYGVFFSTKG 1879
L ++EVCVILD+GQ+SG+VLVYRNPG+HFGD+HVM+A YV+EL D VG+AKYG+FFSTKG
Sbjct: 648 LESNEVCVILDNGQVSGRVLVYRNPGLHFGDVHVMKARYVEELADVVGDAKYGIFFSTKG 707
Query: 1878 QKSAAYEMATGDFDGDLYWISRNPELLKHFKANEPWRRVYSVPDAEKRNPQKSS--NXXX 1705
+SAA E+A GDFDGD+YW+S N +L+ + + PW R++S P+A + P + S
Sbjct: 708 PRSAATEIANGDFDGDMYWVSINRKLVDSYTTSRPWIRMHSTPNAVSKKPSEFSADELEY 767
Query: 1704 XXXXXXXEARRPSYSMGIAADSWLAYMDRLLSLGDDRAIEKDSLKRKMIKLIDIYYDALD 1525
EA+ +M +AADSWLA+MDRLL+L DD + SLK KM+ LIDIYYDALD
Sbjct: 768 ELFRQFLEAKSKGANMSLAADSWLAFMDRLLTLRDDNVDDMHSLKGKMLHLIDIYYDALD 827
Query: 1524 APKSGKKVDVPNDLRAEMFPHHMGKAPDISYRSSSILGKIYDSVLEFHDEAPPRRQEIWK 1345
APKSGKKV +P+ L+A FPH+M K SY S+SILG+IYD V + DE EI K
Sbjct: 828 APKSGKKVSIPHYLKANKFPHYMEKGNSCSYHSTSILGQIYDHVDSYPDE-DLCITEISK 886
Query: 1344 LPCFDVSISEKHVTEWKTNYDCYRREMREVLNXXXXXXXXXXXDVIKKYKQMLYEAPDME 1165
LPCF+V I ++ +T W+ Y+ Y+++M +N +VIKKYK +LY A + E
Sbjct: 887 LPCFEVEIPQRCMTLWRGRYEEYKKDMTRAMNFDCELRITSCNEVIKKYKMLLYGAVEFE 946
Query: 1164 ESAKDTQVIYEEAVAIYHVTYNYASM-YGVEKCGFAWKVAGSALCSLCAWKSAALNEKPV 988
++ + T+ I++EA+AIYHVTY+ A + Y +EKCGFAWKVAGSALC + A EK +
Sbjct: 947 QTVRKTEDIFDEALAIYHVTYDNARITYSIEKCGFAWKVAGSALCRIHAMYR---KEKDL 1003
Query: 987 TILPSVLRSLL 955
ILPSVL+ +L
Sbjct: 1004 PILPSVLQEIL 1014
>ref|XP_009592437.1| PREDICTED: probable RNA-dependent RNA polymerase 3 isoform X2
[Nicotiana tomentosiformis]
Length = 1018
Score = 851 bits (2199), Expect = 0.0
Identities = 486/1029 (47%), Positives = 647/1029 (62%), Gaps = 25/1029 (2%)
Frame = -1
Query: 3966 VDVRLPESVEDIIKRVSMEKQTQPLDFNARKLLRDIGEQGSLQILGTVLSSSSPI-KTFS 3790
++ LP SVE +++++ E+ +P D R+ L IGEQGSL IL + SS PI KT S
Sbjct: 16 LEAPLPSSVEAMLRKICSEQCQEPPDVGIRRRLGSIGEQGSLTILRII--SSRPIRKTLS 73
Query: 3789 GFVSFLVKQKYPIHKSPSSASPLGLRSPSSA-SPNIAR-NGEGLQSPLSNL------QRT 3634
F+ +L+ + S ASP SPS +P R GE P + Q
Sbjct: 74 AFLVYLMDRYPDCLSSSPFASPQKRTSPSLLPTPESKRVQGESSTKPKPKIGSSPCVQFA 133
Query: 3633 GFQNISCQLSFEDETLESRSCLVRDVSSLSGEHGEMTESVTISPQLLILNKLEYRKLFLL 3454
+ QLSF DE +C T IS QL+IL++LE+RKLFL+
Sbjct: 134 SPHRVVRQLSFRDEPSPESNC--------------RTPPPNISQQLMILSELEFRKLFLV 179
Query: 3453 LSYIKRNKLEAVLTMDDANEVFSMKHLSMPEFEKNIWARYGRKFCEESDRSQYLDWDSGK 3274
LSYI LE V++ A+++ K L M +FE IW +G+ ESDRS+YLDWD GK
Sbjct: 180 LSYIGSKTLEDVISPKIADDIVRKKTLPMTDFESEIWNAFGKACYAESDRSKYLDWDCGK 239
Query: 3273 THFYYCHVSSDGSYYFKGPYLNSLRTHLQRSLGDENVLIVKFSVDGKYSAEKIVEQXXXX 3094
TH YYCH+ +G FKGPYLN+ RTHLQR+LGDENVLIVKF V+ A IVE+
Sbjct: 240 THLYYCHIKQNGYCTFKGPYLNTTRTHLQRALGDENVLIVKF-VEDACCANIIVEEGILV 298
Query: 3093 XXXXXXXXXFKDERKKVKKNRDWEDKNCTYSDVKSYFVHFDSISTHGNEENYILSRKSVS 2914
+KD++++ K + K + +K YFV F+SI T+ + +Y+ + K S
Sbjct: 299 GFRRYRFFVYKDDKERKKTPAIMKTKTAS---LKCYFVRFESIETYNHGGSYVFAAKRTS 355
Query: 2913 EARRLFMHIHTLSTLEKYMARFSLILSKTTKLYLDFAAITVDIIEDIPFQDENGSIIHDE 2734
EAR FMH+H +S + KY AR SLILSKT KL ++ A++T++ +EDI +DE+G II DE
Sbjct: 356 EARCHFMHVHMVSNMAKYAARLSLILSKTIKLQVNLASVTIERVEDILCRDESGCIICDE 415
Query: 2733 DGKPILHTDGTGYISEDLAMK---------YITNSSSE----FATFGGTVCQERGAAARI 2593
DG+P +HTDGTG+ISEDLAM+ YI + + E + + RG +
Sbjct: 416 DGEPRIHTDGTGFISEDLAMRCPKDFSKAEYIKDENYENFVDIVDLEDMIAERRGNGSLN 475
Query: 2592 NEPPLLIQCRLFHDGYAVKGTLLLNRKLEPGRIQIRPSMIKVEKDQALQSEETLNSLEIV 2413
EPPLL+QCRLF +G AVKGT L+NRK+ +IQIRPSM+KVE D + + T NSLE+V
Sbjct: 476 KEPPLLMQCRLFKNGCAVKGTFLVNRKIGSRKIQIRPSMVKVETDPTISALPTFNSLEVV 535
Query: 2412 NISHRPPRNYLSKYLIALLSYGGVPQEFFLNLLSNALNETQNVYSNRRSALRVASLHDGL 2233
I RP + YLSK+LI+LLSYGGV EFF+ +L +AL ET+ VY +R+AL+VA + +
Sbjct: 536 AI--RPRKTYLSKHLISLLSYGGVGNEFFMEILGSALEETKQVYLKKRAALKVAINYREM 593
Query: 2232 YWGFEAQRMICSGVPLNEPYLQHCLYNVXXXXXXXXXXXXLPVSESFYLMGTADPTGVLN 2053
A R+I SGVPLNEP+L L + LP+S+SFYLMGTADPTGVL
Sbjct: 594 DDDCLAARLISSGVPLNEPHLHARLSRLAKIERSKLRGGKLPLSDSFYLMGTADPTGVLE 653
Query: 2052 NDEVCVILDSGQISGKVLVYRNPGMHFGDIHVMEAIYVKELEDFVGNAKYGVFFSTKGQK 1873
N+EVCVILDSGQ+SG+VLVYRNPG+HFGD+HVM+A YV+EL D VG+AKYG+FFSTKG +
Sbjct: 654 NNEVCVILDSGQVSGRVLVYRNPGLHFGDVHVMKARYVEELVDIVGDAKYGIFFSTKGPR 713
Query: 1872 SAAYEMATGDFDGDLYWISRNPELLKHFKANEPWRRVYSVPDAEKRNPQKSS--NXXXXX 1699
SAA E+A GDFDGD+YW+S N +L+ ++A++PW R++S P A + P + S
Sbjct: 714 SAASEIANGDFDGDMYWVSINRKLVDSYRASKPWTRMHSTPKAVSKKPTEFSADELEYEL 773
Query: 1698 XXXXXEARRPSYSMGIAADSWLAYMDRLLSLGDDRAIEKDSLKRKMIKLIDIYYDALDAP 1519
A+ SM +AADSWLA+MD LL L DD SLK K++ LIDIYYDALDAP
Sbjct: 774 FRQFLGAKSKGASMSVAADSWLAFMDLLLMLRDDDVDGMHSLKGKILHLIDIYYDALDAP 833
Query: 1518 KSGKKVDVPNDLRAEMFPHHMGKAPDISYRSSSILGKIYDSVLEFHDEAPPRRQEIWKLP 1339
KSGKKV +P+DL+A FPH+M + SY S+SILG+IYD V + DE EI KLP
Sbjct: 834 KSGKKVSIPHDLKANRFPHYMERGNPFSYHSTSILGQIYDYVDSYPDE-DLCITEISKLP 892
Query: 1338 CFDVSISEKHVTEWKTNYDCYRREMREVLNXXXXXXXXXXXDVIKKYKQMLYEAPDMEES 1159
CFDV I ++ + W Y+ Y+++M +N +VIKKYK++LY AP+ E+S
Sbjct: 893 CFDVEIPDECMALWGERYEEYKKDMTMAMNSGCEVKNSACNEVIKKYKKLLYGAPEFEQS 952
Query: 1158 AKDTQVIYEEAVAIYHVTYNYASM-YGVEKCGFAWKVAGSALCSLCAWKSAALNEKPVTI 982
+ T+ I+ EA+A+YHVTY+ A + Y +EKCGFAWKVAGSALC + A E I
Sbjct: 953 VRKTKDIFNEALALYHVTYDNARITYSIEKCGFAWKVAGSALCRIHAMYH---KENAFPI 1009
Query: 981 LPSVLRSLL 955
LPS+L+ +L
Sbjct: 1010 LPSILQDIL 1018
>ref|XP_009760371.1| PREDICTED: probable RNA-dependent RNA polymerase 5 isoform X2
[Nicotiana sylvestris]
Length = 1058
Score = 835 bits (2158), Expect = 0.0
Identities = 492/1043 (47%), Positives = 641/1043 (61%), Gaps = 40/1043 (3%)
Frame = -1
Query: 3960 VRLPESVEDIIKRVSMEKQTQPLDFNARKLLRDIGEQGSLQILGTVLSSSSPIKTFSGFV 3781
++LP SVE ++ ++ ++ P+D R+LL IGE+GSL IL + S KT SGF+
Sbjct: 17 IKLPPSVEQMLNQICKNQRQNPIDEKVRRLLLSIGEEGSLDILSKI-SVCQIKKTLSGFI 75
Query: 3780 SFLVKQKYP------IHKSPSSASP----------LGLRSPSSASPNI---ARNGEGLQS 3658
F+ K+ Y ++P S++ + L SP+S+S ++ RNG Q+
Sbjct: 76 VFMAKKYYQSETQQFYQQTPVSSAESFFQSPQIQRISLSSPNSSSSSVNFSPRNGPLFQA 135
Query: 3657 PLSNLQRTGFQN-ISCQLSFEDETLESRSCLVRDVSS-LSGEHGEMTESVTISPQLLILN 3484
+ N G + S T R+ RD + E+ IS QLL L+
Sbjct: 136 TVHNNVGDGSDSPTSAPQMLSPPTSPERTNFRRDSHDPMPSEYRNRAGIQGISKQLLALS 195
Query: 3483 KLEYRKLFLLLSYIKRNKLEAVLTMDDANEVFSMKHLSMPEFEKNIWARYGRKFCEESDR 3304
LE+RKLFL+L YI R KLE V+ + D E+ M M FE IW +YG CE R
Sbjct: 196 NLEFRKLFLILHYIGRRKLEDVIMLHDVGEILDMTCQPMAHFESYIWTKYGH-LCENVKR 254
Query: 3303 SQYLDWDSGKTHFYYCHVSSDGSYYFKGPYLNSLRTHLQRSLGDENVLIVKFSVDGKYSA 3124
QYLDWDSG++HFY+CHV SDGSY FKGPYL + RTHLQ+SLGDEN+L+V+F +
Sbjct: 255 VQYLDWDSGRSHFYHCHVYSDGSYAFKGPYLKAERTHLQQSLGDENILVVRFMEEAPRCP 314
Query: 3123 EKIVEQXXXXXXXXXXXXXFKDERKKVKKNRDWEDKNCTYSDVKSYFVHFDSISTHGNEE 2944
++IV+ +KD+ KK K + D E+K T VK YFV +S++ + N
Sbjct: 315 QEIVKNGILIGLRRYHFFVYKDDGKK-KNSMDKEEKIDT---VKCYFVRMESLNPYENL- 369
Query: 2943 NYILSRKSVSEARRLFMHIHTLSTLEKYMARFSLILSKTTKLYLDFAAITVDIIEDIPFQ 2764
YIL K V +AR FMH+H +S++ KYMARFSLILS T KL +D ++ +D IEDI
Sbjct: 370 TYILYDKIVHKARCRFMHVHMVSSMAKYMARFSLILSTTVKLQVDLNSVNIDRIEDIYCH 429
Query: 2763 DENGSIIHDEDGKPILHTDGTGYISEDLAMKY--------ITNSSSEFATFG---GTVCQ 2617
D+NG ++DEDGKP++HTDGTGYISEDLA K N+ E + G G
Sbjct: 430 DKNGRTLYDEDGKPLIHTDGTGYISEDLARKCPQDFFNVKYKNAKLERYSNGVEPGENSS 489
Query: 2616 ERGAAA-RINEPPLLIQCRLFHDGYAVKGTLLLNRKLEPGRIQIRPSMIKVEKDQALQSE 2440
E G A + EPPLL+QCRLF++G AVKGTLL+NRKL IQIRPSMIKVE D L
Sbjct: 490 EVGEAEFQSGEPPLLMQCRLFYNGLAVKGTLLVNRKLPRCTIQIRPSMIKVEADPKLSRT 549
Query: 2439 ETLNSLEIVNISHRPPRNYLSKYLIALLSYGGVPQEFFLNLLSNALNETQNVYSNRRSAL 2260
NSLEIV S +P YLS+ LIALL+YGGVP E+F ++L+N L ETQ +YS+ +AL
Sbjct: 550 RMFNSLEIVTPSFKPRNTYLSRTLIALLTYGGVPAEYFFDILNNTLEETQRLYSDEVTAL 609
Query: 2259 RVASLHDGLYWGFEAQRMICSGVPLNEPYLQHCLYNVXXXXXXXXXXXXLPVSESFYLMG 2080
+VA+ H A MI VPL EPYL+ CL ++ LP+S++FYLMG
Sbjct: 610 KVAANHRDRDDASIATGMIMVVVPLCEPYLRCCLSSLAKEERNGLKGGKLPISDTFYLMG 669
Query: 2079 TADPTGVLNNDEVCVILDSGQISGKVLVYRNPGMHFGDIHVMEAIYVKELEDFVGNAKYG 1900
TADPT LN EVCVIL+ GQISG+VLVYRNPG+HFGDIH + A+ VK L D VGNAKYG
Sbjct: 670 TADPTDTLNPHEVCVILEHGQISGEVLVYRNPGLHFGDIHRLLAVPVKNLGDVVGNAKYG 729
Query: 1899 VFFSTKGQKSAAYEMATGDFDGDLYWISRNPELLKHFKANEPWRRVYSVPDAEKRNPQ-- 1726
+FFSTKG +SAA E+A GDFDGD YW+S+NP+LLK++ A+ PW R++S P A R P+
Sbjct: 730 IFFSTKGPRSAATEIANGDFDGDKYWVSQNPQLLKYYHASRPWCRIHSTPKALHREPKDF 789
Query: 1725 KSSNXXXXXXXXXXEARRPSYSMGIAADSWLAYMDRLLSLGDDRAIEKD---SLKRKMIK 1555
+ E R P+YSM A+ SWLA MDRLL L + E + ++K K+ +
Sbjct: 790 SAEEMEHELFQTFLETRMPNYSMADASSSWLALMDRLLMLRKNNTTENEETKTMKEKLFE 849
Query: 1554 LIDIYYDALDAPKSGKKVDVPNDLRAEMFPHHMGKAPDISYRSSSILGKIYDSVLEFHDE 1375
L D+YYDA+DAPKSG KV +P L+ + FPH + K + Y S+S+LG+IYD V F E
Sbjct: 850 LTDLYYDAIDAPKSGNKVYIPKRLKVDKFPHFLEKKEE--YISTSVLGEIYDRVKSFKAE 907
Query: 1374 APPRRQEIWKLPCFDVSISEKHVTEWKTNYDCYRREMREVLNXXXXXXXXXXXDVIKKYK 1195
A EI KLP F+V I E + W+ Y YR EM + LN +V+KKYK
Sbjct: 908 AAV-AVEIKKLPAFEVKIPETCLRLWEERYKKYRFEMMQALNTSSESKNDLADEVVKKYK 966
Query: 1194 QMLYEAPDMEESAKDTQVIYEEAVAIYHVTYNYASMYG-VEKCGFAWKVAGSALCSLCAW 1018
Q+LYEAPDMEESA+ T I+ +A+AIY VTY+YA G V+KCGFAWKVAGSALC L A
Sbjct: 967 QLLYEAPDMEESARSTTDIFNDALAIYRVTYDYAKAIGDVKKCGFAWKVAGSALCRLHAE 1026
Query: 1017 KSA-ALNEKPVTILPSVLRSLLN 952
A N+K + + PS+L LLN
Sbjct: 1027 LHAKEHNQKIMAVSPSILHKLLN 1049
>ref|XP_010313737.1| PREDICTED: probable RNA-dependent RNA polymerase 5 [Solanum
lycopersicum]
Length = 1054
Score = 834 bits (2155), Expect = 0.0
Identities = 497/1049 (47%), Positives = 636/1049 (60%), Gaps = 45/1049 (4%)
Frame = -1
Query: 3963 DVRLPESVEDIIKRVSMEKQTQPLDFNARKLLRDIGEQGSLQILGTVLSSSSPIKTFSGF 3784
+V LP SV+ +I ++ +++ D R+LL IGE+ SL IL + S KT SGF
Sbjct: 11 EVELPSSVQQMINQICKKERQNSPDDTVRRLLVAIGEERSLYILNEI-SKCQIKKTLSGF 69
Query: 3783 VSFLVKQKYP-----IHKSPSSASPLGLRSPSSASPNIARNGEGLQSPLSNLQRTGFQNI 3619
+ F+ K+ Y ++ + P+ SP I RN L SP S+ F
Sbjct: 70 IVFMAKKYYQSETQQFYQKQNHEQPVLSAESFYHSPQIRRNS--LSSPNSSCSSVNFSPR 127
Query: 3618 SCQLSFED-----ETLESRSCLVRDVS--------SLSGEHGEMTESVT--------ISP 3502
+ + F+D +T +S + R S S H + + S IS
Sbjct: 128 NRPI-FQDRDIVGDTSDSPTSGPRIPSPPLSPVTTSFQKCHYDPSPSKFRDRASTRGISE 186
Query: 3501 QLLILNKLEYRKLFLLLSYIKRNKLEAVLTMDDANEVFSMKHLSMPEFEKNIWARYGRKF 3322
QLL LNKLE+RK FL+L+YI R K+E V+T+ D ++ M + M FE IW +YG
Sbjct: 187 QLLALNKLEFRKFFLILNYIGRRKVEDVITLHDVGDILDMIYQPMSHFESYIWNKYGH-L 245
Query: 3321 CEESDRSQYLDWDSGKTHFYYCHVSSDGSYYFKGPYLNSLRTHLQRSLGDENVLIVKFSV 3142
CE + R QYLDWDSG+TH Y+CHV SD SY FKGPYL + RTHLQ SLGDENVLIVKF
Sbjct: 246 CEHNKRVQYLDWDSGRTHLYHCHVHSDRSYTFKGPYLKAERTHLQHSLGDENVLIVKFEQ 305
Query: 3141 DGKYSAEKIVEQXXXXXXXXXXXXXFKDERKKVKKNRDWEDKNCTYSDVKSYFVHFDSIS 2962
+ E+IV+ +KD+ KK R +DK VK YFV +S++
Sbjct: 306 NTPGCPEEIVQNGILVGLRRYRFFVYKDDGKK----RRLKDKEEKIDSVKCYFVRMESLN 361
Query: 2961 THGNEENYILSRKSVSEARRLFMHIHTLSTLEKYMARFSLILSKTTKLYLDFAAITVDII 2782
+ NE YIL K V EAR FMH+H +S++ KYMARFSLILS T KL +D ++ +D I
Sbjct: 362 PYENE-TYILHDKMVHEARCNFMHVHMVSSMAKYMARFSLILSTTVKLQVDLNSVNIDRI 420
Query: 2781 EDIPFQDENGSIIHDEDGKPILHTDGTGYISEDLAMKY------ITNSSSEFATFGGTV- 2623
EDI D++G II+DEDGKP++HTDGTGYISEDLA K + + + + V
Sbjct: 421 EDIYCHDKSGRIIYDEDGKPLIHTDGTGYISEDLARKCPQDFFNVKHKCANLVRYANGVK 480
Query: 2622 ----CQERGAAA-RINEPPLLIQCRLFHDGYAVKGTLLLNRKLEPGRIQIRPSMIKVEKD 2458
E G A + EPPLL+QCRLF++G AVKGTLL+NRKL IQIRPSMIKVE D
Sbjct: 481 LGENSSELGEAEFQSGEPPLLMQCRLFYNGLAVKGTLLVNRKLPQRTIQIRPSMIKVEAD 540
Query: 2457 QALQSEETLNSLEIVNISHRPPRNYLSKYLIALLSYGGVPQEFFLNLLSNALNETQNVYS 2278
L NSLEI S +P YLS+ LIALL+YGGVP E+F ++L+N L ETQ +YS
Sbjct: 541 PRLSRAHMFNSLEINTPSLKPRNTYLSRTLIALLTYGGVPVEYFYDILNNTLEETQRLYS 600
Query: 2277 NRRSALRVASLHDGLYWGFEAQRMICSGVPLNEPYLQHCLYNVXXXXXXXXXXXXLPVSE 2098
+ +AL+VA H A MI +GVPL EPYL CL ++ LP+++
Sbjct: 601 DEVTALKVAVNHRDRDDASTATSMIMAGVPLTEPYLWCCLSSLAKEERNGLKGGRLPIAD 660
Query: 2097 SFYLMGTADPTGVLNNDEVCVILDSGQISGKVLVYRNPGMHFGDIHVMEAIYVKELEDFV 1918
+FYLMGTADPT LN EVCVIL+ GQI G+VL+YRNPG+HFGDIH + A+ VK L D V
Sbjct: 661 TFYLMGTADPTDTLNRHEVCVILEHGQIFGEVLIYRNPGLHFGDIHRLLAVPVKNLGDIV 720
Query: 1917 GNAKYGVFFSTKGQKSAAYEMATGDFDGDLYWISRNPELLKHFKANEPWRRVYSVPDAEK 1738
GNAKYG+FFSTKG +SAA E+A GDFDGD YWIS+NP+LLK+F A+ PW R++S P A
Sbjct: 721 GNAKYGIFFSTKGPRSAATEIANGDFDGDKYWISQNPQLLKYFTASRPWSRIHSTPKALH 780
Query: 1737 RNPQKSS--NXXXXXXXXXXEARRPSYSMGIAADSWLAYMDRLLSLGDDRAIEKD---SL 1573
R P S E R P+YSM A+ +W A MDRLL LG + IE + S+
Sbjct: 781 REPNNFSAEEREHELFQTFLETRMPNYSMADASANWYALMDRLLILGKNNTIENEETKSV 840
Query: 1572 KRKMIKLIDIYYDALDAPKSGKKVDVPNDLRAEMFPHHMGKAPDISYRSSSILGKIYDSV 1393
K K+ +LID+YYDA+DAPKSG KV +P L+ + FPH + K SY S+S+LG+IYD V
Sbjct: 841 KEKLFELIDLYYDAIDAPKSGNKVYIPKRLKVDKFPHFLQKKE--SYHSTSVLGEIYDRV 898
Query: 1392 LEFHDEAPPRRQEIWKLPCFDVSISEKHVTEWKTNYDCYRREMREVLNXXXXXXXXXXXD 1213
+F E P EI KLP F+V I E + W+ Y YR EM+E LN
Sbjct: 899 EKFKAEEPV-AVEIKKLPAFEVGIPETCLRLWEERYRKYRFEMKEALNTSSESKNDLADQ 957
Query: 1212 VIKKYKQMLYEAPDMEESAKDTQVIYEEAVAIYHVTYNYASMYG-VEKCGFAWKVAGSAL 1036
VIKKYKQ+LYEAPDMEES + T IY +A+AIY VTY+YA G V KCGFAWKVAG+AL
Sbjct: 958 VIKKYKQLLYEAPDMEESIRSTTDIYNDALAIYRVTYDYAKAIGDVRKCGFAWKVAGTAL 1017
Query: 1035 CSLCAWKSA-ALNEKPVTILPSVLRSLLN 952
C L A A N+K + + PS+L +LLN
Sbjct: 1018 CRLHAELHAKEHNQKVMAMSPSILHNLLN 1046
>ref|XP_009760370.1| PREDICTED: probable RNA-dependent RNA polymerase 5 isoform X1
[Nicotiana sylvestris]
Length = 1060
Score = 834 bits (2155), Expect = 0.0
Identities = 492/1045 (47%), Positives = 641/1045 (61%), Gaps = 42/1045 (4%)
Frame = -1
Query: 3960 VRLPESVEDIIKRVSMEKQTQPLDFNARKLLRDIGEQGSLQILGTVLSSSSPIKTFSGFV 3781
++LP SVE ++ ++ ++ P+D R+LL IGE+GSL IL + S KT SGF+
Sbjct: 17 IKLPPSVEQMLNQICKNQRQNPIDEKVRRLLLSIGEEGSLDILSKI-SVCQIKKTLSGFI 75
Query: 3780 SFLVKQKYP------IHKSPSSASP----------LGLRSPSSASPNI---ARNGEGLQS 3658
F+ K+ Y ++P S++ + L SP+S+S ++ RNG Q+
Sbjct: 76 VFMAKKYYQSETQQFYQQTPVSSAESFFQSPQIQRISLSSPNSSSSSVNFSPRNGPLFQA 135
Query: 3657 PLSNLQRTGFQN---ISCQLSFEDETLESRSCLVRDVSS-LSGEHGEMTESVTISPQLLI 3490
+ N G + S T R+ RD + E+ IS QLL
Sbjct: 136 TVHNNDIVGDGSDSPTSAPQMLSPPTSPERTNFRRDSHDPMPSEYRNRAGIQGISKQLLA 195
Query: 3489 LNKLEYRKLFLLLSYIKRNKLEAVLTMDDANEVFSMKHLSMPEFEKNIWARYGRKFCEES 3310
L+ LE+RKLFL+L YI R KLE V+ + D E+ M M FE IW +YG CE
Sbjct: 196 LSNLEFRKLFLILHYIGRRKLEDVIMLHDVGEILDMTCQPMAHFESYIWTKYGH-LCENV 254
Query: 3309 DRSQYLDWDSGKTHFYYCHVSSDGSYYFKGPYLNSLRTHLQRSLGDENVLIVKFSVDGKY 3130
R QYLDWDSG++HFY+CHV SDGSY FKGPYL + RTHLQ+SLGDEN+L+V+F +
Sbjct: 255 KRVQYLDWDSGRSHFYHCHVYSDGSYAFKGPYLKAERTHLQQSLGDENILVVRFMEEAPR 314
Query: 3129 SAEKIVEQXXXXXXXXXXXXXFKDERKKVKKNRDWEDKNCTYSDVKSYFVHFDSISTHGN 2950
++IV+ +KD+ KK K + D E+K T VK YFV +S++ + N
Sbjct: 315 CPQEIVKNGILIGLRRYHFFVYKDDGKK-KNSMDKEEKIDT---VKCYFVRMESLNPYEN 370
Query: 2949 EENYILSRKSVSEARRLFMHIHTLSTLEKYMARFSLILSKTTKLYLDFAAITVDIIEDIP 2770
YIL K V +AR FMH+H +S++ KYMARFSLILS T KL +D ++ +D IEDI
Sbjct: 371 L-TYILYDKIVHKARCRFMHVHMVSSMAKYMARFSLILSTTVKLQVDLNSVNIDRIEDIY 429
Query: 2769 FQDENGSIIHDEDGKPILHTDGTGYISEDLAMKY--------ITNSSSEFATFG---GTV 2623
D+NG ++DEDGKP++HTDGTGYISEDLA K N+ E + G G
Sbjct: 430 CHDKNGRTLYDEDGKPLIHTDGTGYISEDLARKCPQDFFNVKYKNAKLERYSNGVEPGEN 489
Query: 2622 CQERGAAA-RINEPPLLIQCRLFHDGYAVKGTLLLNRKLEPGRIQIRPSMIKVEKDQALQ 2446
E G A + EPPLL+QCRLF++G AVKGTLL+NRKL IQIRPSMIKVE D L
Sbjct: 490 SSEVGEAEFQSGEPPLLMQCRLFYNGLAVKGTLLVNRKLPRCTIQIRPSMIKVEADPKLS 549
Query: 2445 SEETLNSLEIVNISHRPPRNYLSKYLIALLSYGGVPQEFFLNLLSNALNETQNVYSNRRS 2266
NSLEIV S +P YLS+ LIALL+YGGVP E+F ++L+N L ETQ +YS+ +
Sbjct: 550 RTRMFNSLEIVTPSFKPRNTYLSRTLIALLTYGGVPAEYFFDILNNTLEETQRLYSDEVT 609
Query: 2265 ALRVASLHDGLYWGFEAQRMICSGVPLNEPYLQHCLYNVXXXXXXXXXXXXLPVSESFYL 2086
AL+VA+ H A MI VPL EPYL+ CL ++ LP+S++FYL
Sbjct: 610 ALKVAANHRDRDDASIATGMIMVVVPLCEPYLRCCLSSLAKEERNGLKGGKLPISDTFYL 669
Query: 2085 MGTADPTGVLNNDEVCVILDSGQISGKVLVYRNPGMHFGDIHVMEAIYVKELEDFVGNAK 1906
MGTADPT LN EVCVIL+ GQISG+VLVYRNPG+HFGDIH + A+ VK L D VGNAK
Sbjct: 670 MGTADPTDTLNPHEVCVILEHGQISGEVLVYRNPGLHFGDIHRLLAVPVKNLGDVVGNAK 729
Query: 1905 YGVFFSTKGQKSAAYEMATGDFDGDLYWISRNPELLKHFKANEPWRRVYSVPDAEKRNPQ 1726
YG+FFSTKG +SAA E+A GDFDGD YW+S+NP+LLK++ A+ PW R++S P A R P+
Sbjct: 730 YGIFFSTKGPRSAATEIANGDFDGDKYWVSQNPQLLKYYHASRPWCRIHSTPKALHREPK 789
Query: 1725 --KSSNXXXXXXXXXXEARRPSYSMGIAADSWLAYMDRLLSLGDDRAIEKD---SLKRKM 1561
+ E R P+YSM A+ SWLA MDRLL L + E + ++K K+
Sbjct: 790 DFSAEEMEHELFQTFLETRMPNYSMADASSSWLALMDRLLMLRKNNTTENEETKTMKEKL 849
Query: 1560 IKLIDIYYDALDAPKSGKKVDVPNDLRAEMFPHHMGKAPDISYRSSSILGKIYDSVLEFH 1381
+L D+YYDA+DAPKSG KV +P L+ + FPH + K + Y S+S+LG+IYD V F
Sbjct: 850 FELTDLYYDAIDAPKSGNKVYIPKRLKVDKFPHFLEKKEE--YISTSVLGEIYDRVKSFK 907
Query: 1380 DEAPPRRQEIWKLPCFDVSISEKHVTEWKTNYDCYRREMREVLNXXXXXXXXXXXDVIKK 1201
EA EI KLP F+V I E + W+ Y YR EM + LN +V+KK
Sbjct: 908 AEAAV-AVEIKKLPAFEVKIPETCLRLWEERYKKYRFEMMQALNTSSESKNDLADEVVKK 966
Query: 1200 YKQMLYEAPDMEESAKDTQVIYEEAVAIYHVTYNYASMYG-VEKCGFAWKVAGSALCSLC 1024
YKQ+LYEAPDMEESA+ T I+ +A+AIY VTY+YA G V+KCGFAWKVAGSALC L
Sbjct: 967 YKQLLYEAPDMEESARSTTDIFNDALAIYRVTYDYAKAIGDVKKCGFAWKVAGSALCRLH 1026
Query: 1023 AWKSA-ALNEKPVTILPSVLRSLLN 952
A A N+K + + PS+L LLN
Sbjct: 1027 AELHAKEHNQKIMAVSPSILHKLLN 1051
>ref|XP_009603362.1| PREDICTED: probable RNA-dependent RNA polymerase 5 isoform X2
[Nicotiana tomentosiformis]
Length = 1061
Score = 823 bits (2126), Expect = 0.0
Identities = 487/1045 (46%), Positives = 632/1045 (60%), Gaps = 42/1045 (4%)
Frame = -1
Query: 3960 VRLPESVEDIIKRVSMEKQTQPLDFNARKLLRDIGEQGSLQILGTVLSSSSPIKTFSGFV 3781
++LP SVE ++ ++ ++ D R+LL IGE+GSL IL + S S KT SGF+
Sbjct: 18 IKLPPSVEQMLNQICKNQRQNLPDKKVRRLLLSIGEEGSLDILSEI-SVSQIKKTLSGFI 76
Query: 3780 SFLVKQKYP------IHKSPSSASP------------LGLRSPSSASPNI---ARNGEGL 3664
F+ K+ Y + P+ S + L SP+S+S +I R G
Sbjct: 77 VFMAKKYYQSETQQFYQQQPTQVSSAESFFQSPQIQRISLSSPNSSSSSINFSPRIGPLF 136
Query: 3663 QSPLSNLQRTGFQN-ISCQLSFEDETLESRSCLVRDV-SSLSGEHGEMTESVTISPQLLI 3490
Q+ + N G + S R+ RD+ E IS QLL
Sbjct: 137 QATVHNNVGDGSDSPTSAPQMLSPPMSPERTIFQRDLYDPTPSEFRNRAGIQGISEQLLA 196
Query: 3489 LNKLEYRKLFLLLSYIKRNKLEAVLTMDDANEVFSMKHLSMPEFEKNIWARYGRKFCEES 3310
L+ LE+RKLFL+L YI R KLE V+ + D ++ M M FE IW +YG CE
Sbjct: 197 LSNLEFRKLFLILHYIGRRKLEDVIMLHDVGDILDMTCQPMAHFESCIWTKYGH-LCENV 255
Query: 3309 DRSQYLDWDSGKTHFYYCHVSSDGSYYFKGPYLNSLRTHLQRSLGDENVLIVKFSVDGKY 3130
R QYLDWDSG++HFY+CHV SDGSY FKGPYL + RTHLQ+SLGDEN+L+V+F +
Sbjct: 256 KRVQYLDWDSGRSHFYHCHVYSDGSYAFKGPYLKAERTHLQQSLGDENILVVRFMEEAPR 315
Query: 3129 SAEKIVEQXXXXXXXXXXXXXFKDERKKVKKNRDWEDKNCTYSDVKSYFVHFDSISTHGN 2950
++IV+ +KD+ KK K + D E+K T VK YFV +S++ + N
Sbjct: 316 CPQEIVKNGILVGLRRYRFFVYKDDGKK-KNSMDKEEKIDT---VKCYFVRMESLNPYEN 371
Query: 2949 EENYILSRKSVSEARRLFMHIHTLSTLEKYMARFSLILSKTTKLYLDFAAITVDIIEDIP 2770
YIL K V EAR FMH+H + ++ KYMARFSLILS T KL +D ++ +D IEDI
Sbjct: 372 L-TYILHNKIVHEARCRFMHVHMVPSMAKYMARFSLILSTTVKLQVDLNSVNIDRIEDIY 430
Query: 2769 FQDENGSIIHDEDGKPILHTDGTGYISEDLAMKY--------ITNSSSEFATFG---GTV 2623
D+NG ++DEDGKP++HTDGTGYISEDLA K N+ E G G
Sbjct: 431 CHDKNGRTLYDEDGKPLIHTDGTGYISEDLARKCPQDFFNVKYKNAKLERYPNGVELGES 490
Query: 2622 CQERGAAA-RINEPPLLIQCRLFHDGYAVKGTLLLNRKLEPGRIQIRPSMIKVEKDQALQ 2446
E G A + EPPLL+QCRLF++G AVKGTLL+NRKL G IQIRPSMIKVE D L
Sbjct: 491 SSELGEAEFQSGEPPLLMQCRLFYNGLAVKGTLLVNRKLPRGTIQIRPSMIKVEADPKLS 550
Query: 2445 SEETLNSLEIVNISHRPPRNYLSKYLIALLSYGGVPQEFFLNLLSNALNETQNVYSNRRS 2266
NSLEIV S +P YLS+ LIALL+YGGVP E+F ++L+N L ETQ +YS+ +
Sbjct: 551 RARMFNSLEIVTPSFKPRNTYLSRTLIALLTYGGVPGEYFFDILNNTLEETQRLYSDEVT 610
Query: 2265 ALRVASLHDGLYWGFEAQRMICSGVPLNEPYLQHCLYNVXXXXXXXXXXXXLPVSESFYL 2086
AL+VA+ H A MI +GVPL EPYL+ CL ++ LP+S++FYL
Sbjct: 611 ALKVAANHRDRDDASIATGMIMAGVPLCEPYLRCCLSSLAKEERNGLKGGKLPISDTFYL 670
Query: 2085 MGTADPTGVLNNDEVCVILDSGQISGKVLVYRNPGMHFGDIHVMEAIYVKELEDFVGNAK 1906
MGTADPT LN EVCVIL+ GQISG+VLVYRNPG+HFGDIH + A+ VK L D VGNAK
Sbjct: 671 MGTADPTDTLNPHEVCVILEHGQISGEVLVYRNPGLHFGDIHRLLAVPVKNLGDVVGNAK 730
Query: 1905 YGVFFSTKGQKSAAYEMATGDFDGDLYWISRNPELLKHFKANEPWRRVYSVPDAEKRNPQ 1726
YG+ FSTKG +SAA E+A GDFDGD YW+S+NP+LLK+++A+ PW R++S P R P
Sbjct: 731 YGILFSTKGPRSAATEIANGDFDGDKYWVSQNPQLLKYYRASRPWSRIHSTPKTLHREPN 790
Query: 1725 --KSSNXXXXXXXXXXEARRPSYSMGIAADSWLAYMDRLLSLGDDRAIEKD---SLKRKM 1561
+ E R P+YSM A+ SWLA +DRLL L + E + ++K K+
Sbjct: 791 DFSAEEMEHELFQTFLETRMPNYSMADASSSWLALVDRLLILRKNYTTENEETKTMKEKL 850
Query: 1560 IKLIDIYYDALDAPKSGKKVDVPNDLRAEMFPHHMGKAPDISYRSSSILGKIYDSVLEFH 1381
+L D+YYDA+DAPKSG KV +P L+ + FPH + K + Y S+S+LG+IYD V F
Sbjct: 851 FELTDLYYDAIDAPKSGNKVYIPKRLKVDKFPHFLEKKAE--YISTSVLGEIYDRVKSFK 908
Query: 1380 DEAPPRRQEIWKLPCFDVSISEKHVTEWKTNYDCYRREMREVLNXXXXXXXXXXXDVIKK 1201
E EI KLP F+V I E + W+ Y YR EM + LN +V+KK
Sbjct: 909 AE-EAAAVEIKKLPAFEVKIPETCLRLWEERYKKYRFEMMQALNTSSESKNDLADEVVKK 967
Query: 1200 YKQMLYEAPDMEESAKDTQVIYEEAVAIYHVTYNYASMYG-VEKCGFAWKVAGSALCSLC 1024
YKQ+LYEA DMEESA+ T I+ +A+AIY VTY+YA G V+KCGFAWKVAGSALC L
Sbjct: 968 YKQLLYEATDMEESARSTTDIFNDALAIYRVTYDYAKAIGDVKKCGFAWKVAGSALCRLH 1027
Query: 1023 AWKSA-ALNEKPVTILPSVLRSLLN 952
A A N+K + + PS+L LLN
Sbjct: 1028 AELHAKEHNQKVMAVSPSILHKLLN 1052
>ref|XP_009603361.1| PREDICTED: probable RNA-dependent RNA polymerase 5 isoform X1
[Nicotiana tomentosiformis]
Length = 1063
Score = 822 bits (2123), Expect = 0.0
Identities = 486/1057 (45%), Positives = 635/1057 (60%), Gaps = 54/1057 (5%)
Frame = -1
Query: 3960 VRLPESVEDIIKRVSMEKQTQPLDFNARKLLRDIGEQGSLQILGTVLSSSSPIKTFSGFV 3781
++LP SVE ++ ++ ++ D R+LL IGE+GSL IL + S S KT SGF+
Sbjct: 18 IKLPPSVEQMLNQICKNQRQNLPDKKVRRLLLSIGEEGSLDILSEI-SVSQIKKTLSGFI 76
Query: 3780 SFLVKQKYP------IHKSPSSASP------------LGLRSPSSASPNIARN------- 3676
F+ K+ Y + P+ S + L SP+S+S +I +
Sbjct: 77 VFMAKKYYQSETQQFYQQQPTQVSSAESFFQSPQIQRISLSSPNSSSSSINFSPRIGPLF 136
Query: 3675 ----------GEGLQSPLSNLQRTGFQNISCQLSFEDETLESRSCLVRDVSSLSGEHGEM 3526
G+G SP S Q + F+ + + R+ + + G
Sbjct: 137 QATVHNNDIVGDGSDSPTSAPQMLSPPMSPERTIFQRDLYDPTPSEFRNRAGIQG----- 191
Query: 3525 TESVTISPQLLILNKLEYRKLFLLLSYIKRNKLEAVLTMDDANEVFSMKHLSMPEFEKNI 3346
IS QLL L+ LE+RKLFL+L YI R KLE V+ + D ++ M M FE I
Sbjct: 192 -----ISEQLLALSNLEFRKLFLILHYIGRRKLEDVIMLHDVGDILDMTCQPMAHFESCI 246
Query: 3345 WARYGRKFCEESDRSQYLDWDSGKTHFYYCHVSSDGSYYFKGPYLNSLRTHLQRSLGDEN 3166
W +YG CE R QYLDWDSG++HFY+CHV SDGSY FKGPYL + RTHLQ+SLGDEN
Sbjct: 247 WTKYGH-LCENVKRVQYLDWDSGRSHFYHCHVYSDGSYAFKGPYLKAERTHLQQSLGDEN 305
Query: 3165 VLIVKFSVDGKYSAEKIVEQXXXXXXXXXXXXXFKDERKKVKKNRDWEDKNCTYSDVKSY 2986
+L+V+F + ++IV+ +KD+ KK K + D E+K T VK Y
Sbjct: 306 ILVVRFMEEAPRCPQEIVKNGILVGLRRYRFFVYKDDGKK-KNSMDKEEKIDT---VKCY 361
Query: 2985 FVHFDSISTHGNEENYILSRKSVSEARRLFMHIHTLSTLEKYMARFSLILSKTTKLYLDF 2806
FV +S++ + N YIL K V EAR FMH+H + ++ KYMARFSLILS T KL +D
Sbjct: 362 FVRMESLNPYENL-TYILHNKIVHEARCRFMHVHMVPSMAKYMARFSLILSTTVKLQVDL 420
Query: 2805 AAITVDIIEDIPFQDENGSIIHDEDGKPILHTDGTGYISEDLAMKY--------ITNSSS 2650
++ +D IEDI D+NG ++DEDGKP++HTDGTGYISEDLA K N+
Sbjct: 421 NSVNIDRIEDIYCHDKNGRTLYDEDGKPLIHTDGTGYISEDLARKCPQDFFNVKYKNAKL 480
Query: 2649 EFATFG---GTVCQERGAAA-RINEPPLLIQCRLFHDGYAVKGTLLLNRKLEPGRIQIRP 2482
E G G E G A + EPPLL+QCRLF++G AVKGTLL+NRKL G IQIRP
Sbjct: 481 ERYPNGVELGESSSELGEAEFQSGEPPLLMQCRLFYNGLAVKGTLLVNRKLPRGTIQIRP 540
Query: 2481 SMIKVEKDQALQSEETLNSLEIVNISHRPPRNYLSKYLIALLSYGGVPQEFFLNLLSNAL 2302
SMIKVE D L NSLEIV S +P YLS+ LIALL+YGGVP E+F ++L+N L
Sbjct: 541 SMIKVEADPKLSRARMFNSLEIVTPSFKPRNTYLSRTLIALLTYGGVPGEYFFDILNNTL 600
Query: 2301 NETQNVYSNRRSALRVASLHDGLYWGFEAQRMICSGVPLNEPYLQHCLYNVXXXXXXXXX 2122
ETQ +YS+ +AL+VA+ H A MI +GVPL EPYL+ CL ++
Sbjct: 601 EETQRLYSDEVTALKVAANHRDRDDASIATGMIMAGVPLCEPYLRCCLSSLAKEERNGLK 660
Query: 2121 XXXLPVSESFYLMGTADPTGVLNNDEVCVILDSGQISGKVLVYRNPGMHFGDIHVMEAIY 1942
LP+S++FYLMGTADPT LN EVCVIL+ GQISG+VLVYRNPG+HFGDIH + A+
Sbjct: 661 GGKLPISDTFYLMGTADPTDTLNPHEVCVILEHGQISGEVLVYRNPGLHFGDIHRLLAVP 720
Query: 1941 VKELEDFVGNAKYGVFFSTKGQKSAAYEMATGDFDGDLYWISRNPELLKHFKANEPWRRV 1762
VK L D VGNAKYG+ FSTKG +SAA E+A GDFDGD YW+S+NP+LLK+++A+ PW R+
Sbjct: 721 VKNLGDVVGNAKYGILFSTKGPRSAATEIANGDFDGDKYWVSQNPQLLKYYRASRPWSRI 780
Query: 1761 YSVPDAEKRNPQ--KSSNXXXXXXXXXXEARRPSYSMGIAADSWLAYMDRLLSLGDDRAI 1588
+S P R P + E R P+YSM A+ SWLA +DRLL L +
Sbjct: 781 HSTPKTLHREPNDFSAEEMEHELFQTFLETRMPNYSMADASSSWLALVDRLLILRKNYTT 840
Query: 1587 EKD---SLKRKMIKLIDIYYDALDAPKSGKKVDVPNDLRAEMFPHHMGKAPDISYRSSSI 1417
E + ++K K+ +L D+YYDA+DAPKSG KV +P L+ + FPH + K + Y S+S+
Sbjct: 841 ENEETKTMKEKLFELTDLYYDAIDAPKSGNKVYIPKRLKVDKFPHFLEKKAE--YISTSV 898
Query: 1416 LGKIYDSVLEFHDEAPPRRQEIWKLPCFDVSISEKHVTEWKTNYDCYRREMREVLNXXXX 1237
LG+IYD V F E EI KLP F+V I E + W+ Y YR EM + LN
Sbjct: 899 LGEIYDRVKSFKAE-EAAAVEIKKLPAFEVKIPETCLRLWEERYKKYRFEMMQALNTSSE 957
Query: 1236 XXXXXXXDVIKKYKQMLYEAPDMEESAKDTQVIYEEAVAIYHVTYNYASMYG-VEKCGFA 1060
+V+KKYKQ+LYEA DMEESA+ T I+ +A+AIY VTY+YA G V+KCGFA
Sbjct: 958 SKNDLADEVVKKYKQLLYEATDMEESARSTTDIFNDALAIYRVTYDYAKAIGDVKKCGFA 1017
Query: 1059 WKVAGSALCSLCAWKSA-ALNEKPVTILPSVLRSLLN 952
WKVAGSALC L A A N+K + + PS+L LLN
Sbjct: 1018 WKVAGSALCRLHAELHAKEHNQKVMAVSPSILHKLLN 1054
>emb|CDP03268.1| unnamed protein product [Coffea canephora]
Length = 875
Score = 813 bits (2100), Expect = 0.0
Identities = 440/872 (50%), Positives = 594/872 (68%), Gaps = 13/872 (1%)
Frame = -1
Query: 3531 EMTESVTISPQLLILNKLEYRKLFLLLSYIKRNKLEAVLTMDDANEVFSMKHLSMPEFEK 3352
++T V + L+ +KLEYRKLFL+ SYI R K E V++ DDA+++ MK L M FE
Sbjct: 23 KITPEVFSYQRTLLTSKLEYRKLFLIYSYIGRRKFEDVVSDDDADQILEMKDLPMGNFES 82
Query: 3351 NIWARYGRKFCEESDRSQYLDWDSGKTHFYYCHVSSDGSYYFKGPYLNSLRTHLQRSLGD 3172
IW YG+++ +DR Q +WD+GKTH YYC+V +DGS FKGP L++ THLQR+LGD
Sbjct: 83 RIWDAYGKRYVP-ADRRQSTEWDTGKTHLYYCYVYADGSCSFKGPCLDTTSTHLQRTLGD 141
Query: 3171 ENVLIVKFSVDGKYSAEKIVEQXXXXXXXXXXXXXFKDERKKVKKNRDWEDKNCTYSDVK 2992
+N+LIVKF+ DG+ ++I+++ K +++ K DK V+
Sbjct: 142 DNILIVKFAEDGRSCIDRILKEGILVGLRCYQFFGTKKQKEMEK------DKTSLSPAVR 195
Query: 2991 SYFVHFDSISTHGNEENYILSRKSVSEARRLFMHIHTLSTLEKYMARFSLILSKTTKLYL 2812
YFV++DSI+ GN E+Y L ++++AR FMH+H +S+L KYMARFSLILSKT KL +
Sbjct: 196 CYFVNYDSIAARGNSESYSLCPSNLNKARCHFMHVHMVSSLAKYMARFSLILSKTIKLPV 255
Query: 2811 DFAAITVDIIEDIPFQDENGSIIHDEDGKPILHTDGTGYISEDLAMKYITN-SSSEFAT- 2638
D ++I ++ IEDIP +DENG I DEDG+ ++ TDGTG+ISEDLA+K N S++F
Sbjct: 256 DLSSIVIESIEDIPCRDENGDEILDEDGEVLVLTDGTGFISEDLALKCPQNFCSAKFLKD 315
Query: 2637 --FGGTVCQERGAAARINEP-PLLIQCRLFHDGYAVKGTLLLNRKLEPGRIQIRPSMIKV 2467
F T ++ P PLL+QCRLF G AVKGTLL+NRK IR SM+KV
Sbjct: 316 NDFEVTCYAYNEEFECLDHPNPLLMQCRLFSRGLAVKGTLLVNRK-------IRSSMVKV 368
Query: 2466 EKDQALQSEETLNSLEIVNISHRPPRNYLSKYLIALLSYGGVPQEFFLNLLSNALNETQN 2287
++D T +SLEIV +SH+P R LSK LIALLSYGGVP+ FFL++L L ETQ
Sbjct: 369 KRDIRCPVAPTFDSLEIVAVSHKPRRCQLSKNLIALLSYGGVPRNFFLDILRTVLEETQA 428
Query: 2286 VYSNRRSALRVASLHDGLYWGFEAQRMICSGVPLNEPYLQHCLYNVXXXXXXXXXXXXLP 2107
+++N +AL+V+ + + G+ RMI +GVPL+EP+LQ L + LP
Sbjct: 429 LFTNLHAALKVSIRNGDMDDGWTTARMILAGVPLSEPHLQDRLAKLANFERKSLKEGKLP 488
Query: 2106 VSESFYLMGTADPTGVLNNDEVCVILDSGQISGKVLVYRNPGMHFGDIHVMEAIYVKELE 1927
+SESFY+MGTADPTG+L +EVCVIL++GQISGKVLVYRNPG+HFGD+HV+EA+YVKELE
Sbjct: 489 ISESFYVMGTADPTGLLKANEVCVILENGQISGKVLVYRNPGLHFGDVHVLEAVYVKELE 548
Query: 1926 DFVGNAKYGVFFSTKGQKSAAYEMATGDFDGDLYWISRNPELLKHFKANEPWRRVYSVPD 1747
D +GNAK+G+FFSTKGQ+S A E+A GDFDGD+YW+SRNP+LLK+F+A+EPW RVYS P
Sbjct: 549 DVIGNAKFGIFFSTKGQRSVANEIANGDFDGDMYWVSRNPQLLKYFRASEPWTRVYSSPP 608
Query: 1746 AEKRNPQ--KSSNXXXXXXXXXXEARRPSYSMGIAADSWLAYMDRLLSLGDDRAIEKDSL 1573
AE + P + E R+ S++M +AA SWLA+MDRLL L D+ A + D L
Sbjct: 609 AENKKPSDFSAEALEYELFRLSLEKRKQSFNMAVAAHSWLAFMDRLLVLRDENAGDTDGL 668
Query: 1572 KRKMIKLIDIYYDALDAPKSGKKVDVPNDLRAEMFPHHMGKAPDISYRSSSILGKIYDSV 1393
+++++KL+DIYYDALDAPKSGKKV+VP+DL A+ +PH+MGK SY S+SILG I+D
Sbjct: 669 RQQILKLVDIYYDALDAPKSGKKVNVPSDLIAKSYPHYMGKGN--SYHSTSILGDIFDQT 726
Query: 1392 LEFHDEAPPRRQ--EIWKLPCFDVSISEKHVTEWKTNYDCYRREMREVLN---XXXXXXX 1228
+F E RR EIWKLPCF+ I E++++ W YD YR EMR+ L
Sbjct: 727 EQFQSE---RRSIGEIWKLPCFNSRIPEEYLSMWMARYDDYRYEMRDALEQNPADDDLKN 783
Query: 1227 XXXXDVIKKYKQMLYEAPDMEESAKDTQVIYEEAVAIYHVTYNYASMYG-VEKCGFAWKV 1051
VIKKYK++LYEA +++ES K + I EA+AIYHV+Y++A G + KC FAW+V
Sbjct: 784 KAADRVIKKYKELLYEAAELQESKKKMEEINNEALAIYHVSYDHAIGRGCISKCSFAWRV 843
Query: 1050 AGSALCSLCAWKSAALNEKPVTILPSVLRSLL 955
AGSALC+L A + + NE P+ ++PSVLR+ L
Sbjct: 844 AGSALCNLHA-SNTSTNEYPMLVVPSVLRNAL 874
>ref|XP_006353487.1| PREDICTED: probable RNA-dependent RNA polymerase 3-like [Solanum
tuberosum]
Length = 1110
Score = 805 bits (2079), Expect = 0.0
Identities = 496/1102 (45%), Positives = 637/1102 (57%), Gaps = 98/1102 (8%)
Frame = -1
Query: 3963 DVRLPESVEDIIKRVSMEKQTQPLDFNARKLLRDIGEQGSLQILGTVLSSSSPIKTFSGF 3784
+V LP SV+ +I ++ +++ D R+LL IGE+ SL IL + S KT SGF
Sbjct: 11 EVELPHSVQQMINQICKKERQNSPDDKVRRLLVAIGEERSLCILREI-SKCQIKKTLSGF 69
Query: 3783 V-------------SFLVKQKY--PI-------HKSPSSASPLGLRSPSSASPNIA-RN- 3676
+ F KQ Y P+ H S L + S +S N + RN
Sbjct: 70 IVFMAKKYYQSETQQFYQKQNYEEPVPSAESFYHSPQIRRSSLSSPNSSCSSVNFSPRNR 129
Query: 3675 ---------GEGLQSPLSNLQRTGFQNISCQLSFEDETLESRSCLVRDVSSLSGEH---- 3535
G+ SP S + SF+ + + R RD +S G
Sbjct: 130 PIFQDNDIVGDASDSPTSAPRIPSPPMSPVTTSFQRDHYDPRPSTFRDRASTRGISEQLL 189
Query: 3534 -----GEMTESVT-------------------------------------ISPQLLILNK 3481
G+ ++S T IS QLL L+K
Sbjct: 190 ALNIVGDASDSPTSAPRIPSPPMSPVTTSFQRDHYDPRPSTFRDRASTRGISEQLLALSK 249
Query: 3480 LEYRKLFLLLSYIKRNKLEAVLTMDDANEVFSMKHLSMPEFEKNIWARYGRKFCEESDRS 3301
LE+RK FL+L+YI R K+E V+ + D ++ M + M FE IW +YG CE + R
Sbjct: 250 LEFRKFFLILNYIGRRKVEDVIMLHDVGDILDMIYQPMSHFESYIWNKYGH-LCEHNKRV 308
Query: 3300 QYLDWDSGKTHFYYCHVSSDGSYYFKGPYLNSLRTHLQRSLGDENVLIVKFSVDGKYSAE 3121
QYLDWDSG+TH Y+CHV SDGSY FKGPYL + RTHLQ+SLGDENVLIVKF + E
Sbjct: 309 QYLDWDSGRTHLYHCHVHSDGSYTFKGPYLKAERTHLQQSLGDENVLIVKFEQNTPGCPE 368
Query: 3120 KIVEQXXXXXXXXXXXXXFKDERKKVKKNRDWEDKNCTYSDVKSYFVHFDSISTHGNEEN 2941
+IV+ +KD+ KK R +DK VK YFV +S++ + +E
Sbjct: 369 EIVQNGILVGLRRYRFFVYKDDGKK----RSSKDKEEKIDSVKCYFVRMESLNPY-EKET 423
Query: 2940 YILSRKSVSEARRLFMHIHTLSTLEKYMARFSLILSKTTKLYLDFAAITVDIIEDIPFQD 2761
YIL K V EAR FMH+H +S++ KYMARFSL LS T KL +D ++ +D IEDI D
Sbjct: 424 YILRDKMVHEARCNFMHVHMVSSMAKYMARFSLTLSTTVKLQVDLNSVNIDRIEDICCHD 483
Query: 2760 ENGSIIHDEDGKPILHTDGTGYISEDLAMKYITN--------SSSEFATFG---GTVCQE 2614
++G II+DEDGKP++HTDGTGYISEDLA K + ++ E T G G E
Sbjct: 484 KSGRIIYDEDGKPLIHTDGTGYISEDLARKCPQDFFNVKHRCANLERYTNGVKLGENSSE 543
Query: 2613 RGAAA-RINEPPLLIQCRLFHDGYAVKGTLLLNRKLEPGRIQIRPSMIKVEKDQALQSEE 2437
G A + EPPLL+QCRLF++G AVKGTLL+NRKL IQIRPSMIKVE D L +
Sbjct: 544 LGEAEFQSGEPPLLMQCRLFYNGLAVKGTLLVNRKLPRRTIQIRPSMIKVEADPRLSRAQ 603
Query: 2436 TLNSLEIVNISHRPPRNYLSKYLIALLSYGGVPQEFFLNLLSNALNETQNVYSNRRSALR 2257
NSLEI S +P YLS+ LIALL+YGGVP E+F ++L+N L ETQ +YS+ +AL+
Sbjct: 604 MFNSLEINTPSLKPRNTYLSRTLIALLTYGGVPVEYFYDILNNTLEETQRLYSDEVTALK 663
Query: 2256 VASLHDGLYWGFEAQRMICSGVPLNEPYLQHCLYNVXXXXXXXXXXXXLPVSESFYLMGT 2077
VA H A MI +GVPL EPYL CL ++ LP++++FYLMGT
Sbjct: 664 VAVNHRDRDDASTATSMIMAGVPLTEPYLWCCLSSLAKEERNGLKGGRLPIADTFYLMGT 723
Query: 2076 ADPTGVLNNDEVCVILDSGQISGKVLVYRNPGMHFGDIHVMEAIYVKELEDFVGNAKYGV 1897
ADPT LN EVCVIL+ GQI G+VLVYRNPG+HFGDIH + A+ VK L D VGNAKYG+
Sbjct: 724 ADPTDTLNPHEVCVILEHGQIFGEVLVYRNPGLHFGDIHRLLAVPVKNLGDIVGNAKYGI 783
Query: 1896 FFSTKGQKSAAYEMATGDFDGDLYWISRNPELLKHFKANEPWRRVYSVPDAEKRNPQKSS 1717
FFSTKG +SAA E+A GDFDGD YW+S+NP+LLK+F A+ PW R++S P R P S
Sbjct: 784 FFSTKGPRSAATEIANGDFDGDKYWVSQNPQLLKYFTASRPWSRIHSTPKTLHREPNNFS 843
Query: 1716 --NXXXXXXXXXXEARRPSYSMGIAADSWLAYMDRLLSLGDDRAIEKD---SLKRKMIKL 1552
E R P+YSM A+ +W A MDRLL LG + E + S+K K+ +L
Sbjct: 844 AEEREHDLFQTFLETRMPNYSMADASANWYALMDRLLILGKNNTTENEEIKSVKEKLFEL 903
Query: 1551 IDIYYDALDAPKSGKKVDVPNDLRAEMFPHHMGKAPDISYRSSSILGKIYDSVLEFHDEA 1372
ID+YYDA+DAPKSG KV +P L+ + FPH + K SY S+S+LG+IYD V +F E
Sbjct: 904 IDLYYDAIDAPKSGNKVYIPKRLKVDKFPHFLQKKE--SYHSTSVLGEIYDRVEKFKAE- 960
Query: 1371 PPRRQEIWKLPCFDVSISEKHVTEWKTNYDCYRREMREVLNXXXXXXXXXXXDVIKKYKQ 1192
P EI KL F+V I + + W+ Y YR EM+E LN VIKKYKQ
Sbjct: 961 EPAAVEIKKLSAFEVGIPDTCLRLWEERYRNYRFEMKEALNTSSESKNDLADQVIKKYKQ 1020
Query: 1191 MLYEAPDMEESAKDTQVIYEEAVAIYHVTYNYASMYG-VEKCGFAWKVAGSALCSLCAWK 1015
+LYEAPDMEES + T +Y +A+AIY VTY+YA G V KCGFAWKVAG+ALC L A
Sbjct: 1021 LLYEAPDMEESIRSTTDMYNDALAIYCVTYDYAKAIGDVRKCGFAWKVAGAALCKLHAEL 1080
Query: 1014 SA-ALNEKPVTILPSVLRSLLN 952
A N+K + + PS+L LLN
Sbjct: 1081 HAKEHNQKVMAMSPSILHKLLN 1102
>ref|XP_010656269.1| PREDICTED: probable RNA-dependent RNA polymerase 5 isoform X1 [Vitis
vinifera]
Length = 954
Score = 793 bits (2048), Expect = 0.0
Identities = 463/1035 (44%), Positives = 618/1035 (59%), Gaps = 30/1035 (2%)
Frame = -1
Query: 3966 VDVRLPESVEDIIKRVSMEKQTQPLDFNARKLLRDIGEQGSLQILGTVLSSSSPIKTFSG 3787
++V LP SVE +++R+ E+Q P + + R+ L +GE+ +L++L + S I+ S
Sbjct: 1 MEVSLPHSVEQMLQRICTEQQQPPPEAHTRRNLASLGEESTLELLRKI--SHLKIRNLSA 58
Query: 3786 FVSFLVKQKYPIHKSPSSASPLGLRSPSSASPNIARNGEGLQSPLSNLQRTGFQNISCQL 3607
++++V + + S +P L + SP S ++ Q
Sbjct: 59 LINYMVGKAAQGDAASHSPTPKHL----------------ISSPSSTPKKARRQ------ 96
Query: 3606 SFEDETLESRSCLVRDVSSLSGEHGEMTESVTISPQLLILNKLEYRKLFLLLSYIKRNKL 3427
SPQL+ L +LE+RK FL+LSYI +
Sbjct: 97 -------------------------------ASSPQLVALGELEFRKAFLILSYIGDKRP 125
Query: 3426 EAVLTMDDANEVFSMKHLSMPEFEKNIWARYGRKFCEESDRSQYLDWDSGKTHFYYCHVS 3247
E +L+ A E+ +K+L M FE +W GRKF +E DR + DWDS KTH Y+CHVS
Sbjct: 126 EDLLS---AEEILKLKNLPMGVFETEVWNNLGRKFIKEEDRQRSFDWDSDKTHIYHCHVS 182
Query: 3246 SDGSYYFKGPYLNSLRTHLQRSLGDENVLIVKF------------SVDGKYSAEKIVEQX 3103
DGSY FKGPYLN RTHLQR LGDEN+L+VKF S D S KI +
Sbjct: 183 PDGSYRFKGPYLNKTRTHLQRVLGDENILLVKFAEDVTDRSSLNCSTDSNASYNKIAREG 242
Query: 3102 XXXXXXXXXXXXFKDERKKVKKNRDWEDKNCTYSDVKSYFVHFDSISTHGNEENYILSRK 2923
FKD K+ KK KN T S VK YFV +S + LS K
Sbjct: 243 IFVGLRQYRFFVFKDGGKEEKK------KNPT-SSVKCYFVFMESSA---------LSGK 286
Query: 2922 SVSEARRLFMHIHTLSTLEKYMARFSLILSKTTKLYLDFAAITVDIIEDIPFQDENGSII 2743
+V EAR +FMH H +S++ KYMARFSLILSKT KL +D + + + I+D P +DE+G ++
Sbjct: 287 TVHEARCIFMHAHMVSSVAKYMARFSLILSKTVKLDVDLSTVNIQRIDDEPGRDEDGHVV 346
Query: 2742 HDEDGKPILHTDGTGYISEDLAM---------KYITNSSSEFAT----FGGTVCQERGAA 2602
+DED KP++ TDGTG+ISEDLA+ KY+ N +S+ G + R
Sbjct: 347 YDEDWKPLILTDGTGFISEDLALRCPNNLCRGKYMNNGNSDRLVGNVELEGKFSELRCLE 406
Query: 2601 ARINEPPLLIQCRLFHDGYAVKGTLLLNRKLEPGRIQIRPSMIKVEKDQALQSEETLNSL 2422
EPPLLIQCRLF++G AVKGTLLLNRKL P IQIRPSMIKVE D L +T+NS+
Sbjct: 407 THTWEPPLLIQCRLFNNGCAVKGTLLLNRKLPPRTIQIRPSMIKVETDPKLSDTQTVNSV 466
Query: 2421 EIVNISHRPPRNYLSKYLIALLSYGGVPQEFFLNLLSNALNETQNVYSNRRSALRVASLH 2242
EI S++P R+YLSKYLIALLSYGGVP E+F+NLL +AL + +V S++R+ALRV SL
Sbjct: 467 EINGTSNQPRRSYLSKYLIALLSYGGVPNEYFMNLLKDALEDAPSVQSSKRAALRV-SLR 525
Query: 2241 DGLYWGFEAQRMICSGVPLNEPYLQHCLYNVXXXXXXXXXXXXLPVSESFYLMGTADPTG 2062
G RMI SG+P++EP+L HCL + LPV++ FYLMGTADPTG
Sbjct: 526 FGEMDDSIVTRMILSGIPIDEPFLHHCLSFMVNEERKGLRVGKLPVNDCFYLMGTADPTG 585
Query: 2061 VLNNDEVCVILDSGQISGKVLVYRNPGMHFGDIHVMEAIYVKELEDFVGNAKYGVFFSTK 1882
L +DEVC+ILD GQ+ G+VLVY++PG+HFGDIHV+ A YV+ LE+FVGNAKY +FF K
Sbjct: 586 TLKSDEVCIILDHGQVQGRVLVYKHPGLHFGDIHVLNATYVEALEEFVGNAKYAIFFPIK 645
Query: 1881 GQKSAAYEMATGDFDGDLYWISRNPELLKHFKANEPWRRVYSVPDAEKRNPQKSSNXXXX 1702
G +S A EMA DFDGD+YW+SRN +LL++F+A+EPW R S + P S
Sbjct: 646 GPRSLADEMANSDFDGDMYWVSRNQQLLQYFRASEPWMRKRSTRHVPSKRPTDFSPDELE 705
Query: 1701 XXXXXXEAR---RPSYSMGIAADSWLAYMDRLLSLGDDRAIEKDSLKRKMIKLIDIYYDA 1531
+ S ++G+AAD+WL +MDRLL+L DD + EK+ LKRKM++L DIYYDA
Sbjct: 706 HELFQLFLTTRFQTSSAIGMAADNWLVFMDRLLTLRDDCSDEKECLKRKMLELTDIYYDA 765
Query: 1530 LDAPKSGKKVDVPNDLRAEMFPHHMGKAPDISYRSSSILGKIYDSVLEFHDEAPPRRQEI 1351
LDAPKSG KV+V +L+AE FPH MG+ + SY S+SILG+IYD+V F E + EI
Sbjct: 766 LDAPKSGMKVNVSKELKAEKFPHFMGR--ESSYHSTSILGQIYDAVESFQPENQSTK-EI 822
Query: 1350 WKLPCFDV-SISEKHVTEWKTNYDCYRREMREVLNXXXXXXXXXXXDVIKKYKQMLYEAP 1174
W+LP F++ ++ + + WK YD YR EM L +VI KYKQ+LY A
Sbjct: 823 WRLPLFNIDAVPQACLRSWKDRYDQYRSEMAAALQHGGETKDEYAAEVINKYKQILYGAA 882
Query: 1173 DMEESAKDTQVIYEEAVAIYHVTYNYA-SMYGVEKCGFAWKVAGSALCSLCAWKSAALNE 997
+ EES ++ + I++EA+AIYHVTY + + V C F W+VAG ALC L K L E
Sbjct: 883 EFEESPRNLEDIFDEALAIYHVTYEFVINGARVSYCNFPWRVAGRALCKLYTVK---LGE 939
Query: 996 KPVTILPSVLRSLLN 952
K + +PSVLR + N
Sbjct: 940 KSMVCVPSVLRQVFN 954
>ref|XP_009760372.1| PREDICTED: probable RNA-dependent RNA polymerase 5 isoform X3
[Nicotiana sylvestris]
Length = 905
Score = 791 bits (2043), Expect = 0.0
Identities = 446/872 (51%), Positives = 565/872 (64%), Gaps = 19/872 (2%)
Frame = -1
Query: 3510 ISPQLLILNKLEYRKLFLLLSYIKRNKLEAVLTMDDANEVFSMKHLSMPEFEKNIWARYG 3331
IS QLL L+ LE+RKLFL+L YI R KLE V+ + D E+ M M FE IW +YG
Sbjct: 34 ISKQLLALSNLEFRKLFLILHYIGRRKLEDVIMLHDVGEILDMTCQPMAHFESYIWTKYG 93
Query: 3330 RKFCEESDRSQYLDWDSGKTHFYYCHVSSDGSYYFKGPYLNSLRTHLQRSLGDENVLIVK 3151
CE R QYLDWDSG++HFY+CHV SDGSY FKGPYL + RTHLQ+SLGDEN+L+V+
Sbjct: 94 H-LCENVKRVQYLDWDSGRSHFYHCHVYSDGSYAFKGPYLKAERTHLQQSLGDENILVVR 152
Query: 3150 FSVDGKYSAEKIVEQXXXXXXXXXXXXXFKDERKKVKKNRDWEDKNCTYSDVKSYFVHFD 2971
F + ++IV+ +KD+ KK K + D E+K T VK YFV +
Sbjct: 153 FMEEAPRCPQEIVKNGILIGLRRYHFFVYKDDGKK-KNSMDKEEKIDT---VKCYFVRME 208
Query: 2970 SISTHGNEENYILSRKSVSEARRLFMHIHTLSTLEKYMARFSLILSKTTKLYLDFAAITV 2791
S++ + N YIL K V +AR FMH+H +S++ KYMARFSLILS T KL +D ++ +
Sbjct: 209 SLNPYENL-TYILYDKIVHKARCRFMHVHMVSSMAKYMARFSLILSTTVKLQVDLNSVNI 267
Query: 2790 DIIEDIPFQDENGSIIHDEDGKPILHTDGTGYISEDLAMKY--------ITNSSSEFATF 2635
D IEDI D+NG ++DEDGKP++HTDGTGYISEDLA K N+ E +
Sbjct: 268 DRIEDIYCHDKNGRTLYDEDGKPLIHTDGTGYISEDLARKCPQDFFNVKYKNAKLERYSN 327
Query: 2634 G---GTVCQERGAAA-RINEPPLLIQCRLFHDGYAVKGTLLLNRKLEPGRIQIRPSMIKV 2467
G G E G A + EPPLL+QCRLF++G AVKGTLL+NRKL IQIRPSMIKV
Sbjct: 328 GVEPGENSSEVGEAEFQSGEPPLLMQCRLFYNGLAVKGTLLVNRKLPRCTIQIRPSMIKV 387
Query: 2466 EKDQALQSEETLNSLEIVNISHRPPRNYLSKYLIALLSYGGVPQEFFLNLLSNALNETQN 2287
E D L NSLEIV S +P YLS+ LIALL+YGGVP E+F ++L+N L ETQ
Sbjct: 388 EADPKLSRTRMFNSLEIVTPSFKPRNTYLSRTLIALLTYGGVPAEYFFDILNNTLEETQR 447
Query: 2286 VYSNRRSALRVASLHDGLYWGFEAQRMICSGVPLNEPYLQHCLYNVXXXXXXXXXXXXLP 2107
+YS+ +AL+VA+ H A MI VPL EPYL+ CL ++ LP
Sbjct: 448 LYSDEVTALKVAANHRDRDDASIATGMIMVVVPLCEPYLRCCLSSLAKEERNGLKGGKLP 507
Query: 2106 VSESFYLMGTADPTGVLNNDEVCVILDSGQISGKVLVYRNPGMHFGDIHVMEAIYVKELE 1927
+S++FYLMGTADPT LN EVCVIL+ GQISG+VLVYRNPG+HFGDIH + A+ VK L
Sbjct: 508 ISDTFYLMGTADPTDTLNPHEVCVILEHGQISGEVLVYRNPGLHFGDIHRLLAVPVKNLG 567
Query: 1926 DFVGNAKYGVFFSTKGQKSAAYEMATGDFDGDLYWISRNPELLKHFKANEPWRRVYSVPD 1747
D VGNAKYG+FFSTKG +SAA E+A GDFDGD YW+S+NP+LLK++ A+ PW R++S P
Sbjct: 568 DVVGNAKYGIFFSTKGPRSAATEIANGDFDGDKYWVSQNPQLLKYYHASRPWCRIHSTPK 627
Query: 1746 AEKRNPQ--KSSNXXXXXXXXXXEARRPSYSMGIAADSWLAYMDRLLSLGDDRAIEKD-- 1579
A R P+ + E R P+YSM A+ SWLA MDRLL L + E +
Sbjct: 628 ALHREPKDFSAEEMEHELFQTFLETRMPNYSMADASSSWLALMDRLLMLRKNNTTENEET 687
Query: 1578 -SLKRKMIKLIDIYYDALDAPKSGKKVDVPNDLRAEMFPHHMGKAPDISYRSSSILGKIY 1402
++K K+ +L D+YYDA+DAPKSG KV +P L+ + FPH + K + Y S+S+LG+IY
Sbjct: 688 KTMKEKLFELTDLYYDAIDAPKSGNKVYIPKRLKVDKFPHFLEKKEE--YISTSVLGEIY 745
Query: 1401 DSVLEFHDEAPPRRQEIWKLPCFDVSISEKHVTEWKTNYDCYRREMREVLNXXXXXXXXX 1222
D V F EA EI KLP F+V I E + W+ Y YR EM + LN
Sbjct: 746 DRVKSFKAEAAV-AVEIKKLPAFEVKIPETCLRLWEERYKKYRFEMMQALNTSSESKNDL 804
Query: 1221 XXDVIKKYKQMLYEAPDMEESAKDTQVIYEEAVAIYHVTYNYASMYG-VEKCGFAWKVAG 1045
+V+KKYKQ+LYEAPDMEESA+ T I+ +A+AIY VTY+YA G V+KCGFAWKVAG
Sbjct: 805 ADEVVKKYKQLLYEAPDMEESARSTTDIFNDALAIYRVTYDYAKAIGDVKKCGFAWKVAG 864
Query: 1044 SALCSLCAWKSA-ALNEKPVTILPSVLRSLLN 952
SALC L A A N+K + + PS+L LLN
Sbjct: 865 SALCRLHAELHAKEHNQKIMAVSPSILHKLLN 896