BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Perilla23_contig00011268
         (1490 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011082677.1| PREDICTED: DNA-directed RNA polymerases IV a...   852   0.0  
ref|XP_012847152.1| PREDICTED: DNA-directed RNA polymerases IV a...   815   0.0  
gb|EPS73521.1| hypothetical protein M569_01229, partial [Genlise...   750   0.0  
ref|XP_009787512.1| PREDICTED: DNA-directed RNA polymerases IV a...   703   0.0  
ref|XP_009787511.1| PREDICTED: DNA-directed RNA polymerases IV a...   703   0.0  
ref|XP_009605686.1| PREDICTED: DNA-directed RNA polymerases IV a...   703   0.0  
emb|CDP07172.1| unnamed protein product [Coffea canephora]            685   0.0  
ref|XP_004236361.1| PREDICTED: DNA-directed RNA polymerases IV a...   685   0.0  
ref|XP_006351506.1| PREDICTED: DNA-directed RNA polymerases IV a...   684   0.0  
gb|AAY68206.1| RNA polymerase IV second largest subunit [Solanum...   683   0.0  
emb|CBI21137.3| unnamed protein product [Vitis vinifera]              675   0.0  
ref|XP_002283296.1| PREDICTED: DNA-directed RNA polymerases IV a...   675   0.0  
emb|CDP09677.1| unnamed protein product [Coffea canephora]            672   0.0  
ref|XP_006364477.1| PREDICTED: DNA-directed RNA polymerases IV a...   665   0.0  
ref|XP_010325603.1| PREDICTED: DNA-directed RNA polymerases IV a...   659   0.0  
ref|XP_004245914.1| PREDICTED: DNA-directed RNA polymerases IV a...   659   0.0  
gb|KNA21785.1| hypothetical protein SOVF_039620 [Spinacia oleracea]   647   0.0  
gb|ABG29321.1| DNA-directed RNA polymerase, putative [Solanum bu...   647   0.0  
gb|AAY68198.1| RNA polymerase IV second largest subunit [Rhodode...   647   0.0  
ref|XP_010046894.1| PREDICTED: DNA-directed RNA polymerases IV a...   645   0.0  

>ref|XP_011082677.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
            [Sesamum indicum]
          Length = 1207

 Score =  852 bits (2201), Expect = 0.0
 Identities = 407/496 (82%), Positives = 455/496 (91%)
 Frame = -1

Query: 1490 AHLQNMTYSSRIKVETHLQVYTEGLSRSDKFKTGVDKFVEKTILNEYQTDVNFGRLPVMV 1311
            A LQNMTYSSRIKVETHL+V+TE LSRSDKFKTGV+KF+EKT+L+EY TDVNFGRLPVMV
Sbjct: 154  ARLQNMTYSSRIKVETHLEVFTESLSRSDKFKTGVEKFIEKTLLHEYHTDVNFGRLPVMV 213

Query: 1310 KSDLCWMSKREERDCEFDQGGYFLIKGAEKTFIAQEQICYRRLWVSKDPTWTIAYRPVPK 1131
            KSDLCWMS+ EERDCEF+QGGYF+IKGAEKTFIAQEQIC +RLWV+K P WTI+YRPV K
Sbjct: 214  KSDLCWMSELEERDCEFEQGGYFVIKGAEKTFIAQEQICLKRLWVAKSPAWTISYRPVSK 273

Query: 1130 RKRVYIKLVPKVEHLIAGQKILTVYFYVVELPIWLLFFALGVPNDREVVKLIGLDTEEDP 951
            RKR+++KLVPKVEH+  G+KILTVYFYV E+PIWLLFFALGVPNDREVVK+I LD E D 
Sbjct: 274  RKRIFVKLVPKVEHITGGEKILTVYFYVTEIPIWLLFFALGVPNDREVVKMIDLDVE-DS 332

Query: 950  DIVNILVASIYDADKKFEGFRKEGNAIKHIKELMQNCRFPPTESVEECIRNYLFPNLRSP 771
             I NIL+ASIYDAD+K+EGFRK GNA K IKELMQ CRFPPTESVEECI NYLFP+L+SP
Sbjct: 333  AISNILIASIYDADRKYEGFRKGGNAQKFIKELMQGCRFPPTESVEECITNYLFPHLKSP 392

Query: 770  GQKAYFLAYMVKCLLEAFRGRRKVDNRDDLRNKRVELAGELLERELMVHIKHAEKRLIKA 591
             QKA FLAYMVKCLLEA+RGRRKVDNRDDLRNKR+ELAGELLEREL VHIKHAE+R++KA
Sbjct: 393  EQKACFLAYMVKCLLEAYRGRRKVDNRDDLRNKRLELAGELLERELKVHIKHAERRMVKA 452

Query: 590  IQRDLYRDREVQTIDHYLDASIITNGLSRAFSTGAWVHPFKRMERIAGVVATLRRTNPLQ 411
            IQRDLY DREVQ+IDHYLDASIITNGLSRAFSTGAW HP+KRMERI+G+VAT+RRTNPLQ
Sbjct: 453  IQRDLYNDREVQSIDHYLDASIITNGLSRAFSTGAWSHPYKRMERISGIVATIRRTNPLQ 512

Query: 410  AVSDMRKTRQQVSYTGRVGDARYPHPSHWGKVCFISTPDGENCGLVKNLAGLGLVSINIL 231
            A +DMRKTRQQVSYTGRVGDARYPHPSHWGK+CF+STPDGENCGLVKNLA +GLVS +IL
Sbjct: 513  ATADMRKTRQQVSYTGRVGDARYPHPSHWGKICFLSTPDGENCGLVKNLASMGLVSTDIL 572

Query: 230  EQETLLQKFHECGMEKLVDDISCLHDGKHKIFLDGDWVGVCKDSSAFVAKLXXXXXRKEV 51
             +E+LLQKF+ECGME LVDD S L +GKHKIFLDGDWVG+CKDSS+FVA++     + EV
Sbjct: 573  NRESLLQKFYECGMEMLVDDASALLNGKHKIFLDGDWVGICKDSSSFVARVRRKRRKTEV 632

Query: 50   PHQIEIKRDKHHGEVR 3
            PHQIEIKRDKHHGEVR
Sbjct: 633  PHQIEIKRDKHHGEVR 648


>ref|XP_012847152.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2
            [Erythranthe guttatus] gi|604317141|gb|EYU29217.1|
            hypothetical protein MIMGU_mgv1a000367mg [Erythranthe
            guttata]
          Length = 1211

 Score =  815 bits (2104), Expect = 0.0
 Identities = 383/496 (77%), Positives = 446/496 (89%)
 Frame = -1

Query: 1490 AHLQNMTYSSRIKVETHLQVYTEGLSRSDKFKTGVDKFVEKTILNEYQTDVNFGRLPVMV 1311
            A LQNMTY+++IKVETHLQVYT+GL+RSDKF TGV+  VEKT+LNEY  +VNFGRLPVMV
Sbjct: 154  ARLQNMTYAAKIKVETHLQVYTKGLNRSDKFTTGVENTVEKTLLNEYHNEVNFGRLPVMV 213

Query: 1310 KSDLCWMSKREERDCEFDQGGYFLIKGAEKTFIAQEQICYRRLWVSKDPTWTIAYRPVPK 1131
            KSDLCWM   +++DCEFDQGGYF+IKGAEKTFIAQEQ+C +RLWV+K P+WT++YRPV +
Sbjct: 214  KSDLCWMKSLDKKDCEFDQGGYFVIKGAEKTFIAQEQLCLKRLWVTKIPSWTVSYRPVAR 273

Query: 1130 RKRVYIKLVPKVEHLIAGQKILTVYFYVVELPIWLLFFALGVPNDREVVKLIGLDTEEDP 951
            R RVYIKLVPK+EH+I   KILTVYFYV E+ +W+LFFALG+PND+EVVKLI LD E D 
Sbjct: 274  RNRVYIKLVPKMEHVIGADKILTVYFYVTEISVWVLFFALGIPNDKEVVKLIDLDIE-DS 332

Query: 950  DIVNILVASIYDADKKFEGFRKEGNAIKHIKELMQNCRFPPTESVEECIRNYLFPNLRSP 771
            DI NIL+ASIYDADKK+EGFRKEGN+ KHIKELMQNC+FPPTES+E+ I+NYLFP+L++P
Sbjct: 333  DIANILIASIYDADKKYEGFRKEGNSSKHIKELMQNCKFPPTESIEDLIKNYLFPHLKTP 392

Query: 770  GQKAYFLAYMVKCLLEAFRGRRKVDNRDDLRNKRVELAGELLERELMVHIKHAEKRLIKA 591
             QKA FL YMVKCLLEA++GRRKV+NRDD RNKR+ELAGELLEREL VHIKHAE+R+ KA
Sbjct: 393  IQKACFLGYMVKCLLEAYKGRRKVENRDDFRNKRLELAGELLERELRVHIKHAERRMTKA 452

Query: 590  IQRDLYRDREVQTIDHYLDASIITNGLSRAFSTGAWVHPFKRMERIAGVVATLRRTNPLQ 411
            +QRDLYRDREVQ+ID YLDASI+TNGLSRAFSTGAW HPFKRMER +GVVAT+RRTNPLQ
Sbjct: 453  MQRDLYRDREVQSIDQYLDASIVTNGLSRAFSTGAWCHPFKRMERTSGVVATIRRTNPLQ 512

Query: 410  AVSDMRKTRQQVSYTGRVGDARYPHPSHWGKVCFISTPDGENCGLVKNLAGLGLVSINIL 231
            A++DMRKTRQQVSYTGRVGDARYPHPSHWGKVCF+STPDGENCGLVKNLA LGLVS N+L
Sbjct: 513  AIADMRKTRQQVSYTGRVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLASLGLVSTNLL 572

Query: 230  EQETLLQKFHECGMEKLVDDISCLHDGKHKIFLDGDWVGVCKDSSAFVAKLXXXXXRKEV 51
             Q  LL+KF +CGMEK+VDD S L  GKHK+FLDGDW+G+CKDSS+FV+KL     R E+
Sbjct: 573  AQGNLLKKFQQCGMEKMVDDTSNLLGGKHKVFLDGDWIGICKDSSSFVSKLRRKRRRMEI 632

Query: 50   PHQIEIKRDKHHGEVR 3
            PHQ+EIKRD+H+GEVR
Sbjct: 633  PHQMEIKRDQHNGEVR 648


>gb|EPS73521.1| hypothetical protein M569_01229, partial [Genlisea aurea]
          Length = 1205

 Score =  750 bits (1936), Expect = 0.0
 Identities = 360/497 (72%), Positives = 428/497 (86%), Gaps = 1/497 (0%)
 Frame = -1

Query: 1490 AHLQNMTYSSRIKVETHLQV-YTEGLSRSDKFKTGVDKFVEKTILNEYQTDVNFGRLPVM 1314
            A LQNMTY++RIKVETHL+V YTEGL RS+KF TGV   V++T L     ++NFG+LPVM
Sbjct: 149  ARLQNMTYAARIKVETHLEVVYTEGLVRSEKFTTGVSTHVQRTTLKSLSLEINFGKLPVM 208

Query: 1313 VKSDLCWMSKREERDCEFDQGGYFLIKGAEKTFIAQEQICYRRLWVSKDPTWTIAYRPVP 1134
            V SDLCW+    ++DCEFDQGGYF+IKGAEKTFIAQEQIC +RLWVSKDPTWTI+YRP+ 
Sbjct: 209  VNSDLCWLKSTGKKDCEFDQGGYFIIKGAEKTFIAQEQICLKRLWVSKDPTWTISYRPIT 268

Query: 1133 KRKRVYIKLVPKVEHLIAGQKILTVYFYVVELPIWLLFFALGVPNDREVVKLIGLDTEED 954
            KR+R+Y+KLVPKVE    G+KILTVYF  VE+PIW+LFFALG  ND+EVVK+I +D E D
Sbjct: 269  KRRRIYLKLVPKVESAPVGEKILTVYFSFVEMPIWILFFALGARNDKEVVKMIDMDIE-D 327

Query: 953  PDIVNILVASIYDADKKFEGFRKEGNAIKHIKELMQNCRFPPTESVEECIRNYLFPNLRS 774
              I NIL+ASI+DAD K+EGFRK G+AIKH+K+LMQ  ++PPTESVEE  + +LFP+L+S
Sbjct: 328  SAIANILLASIHDADSKYEGFRKNGSAIKHLKDLMQEGKYPPTESVEEYFQIHLFPHLKS 387

Query: 773  PGQKAYFLAYMVKCLLEAFRGRRKVDNRDDLRNKRVELAGELLERELMVHIKHAEKRLIK 594
              QKA FLAYMVKCLLE ++GRRKVDNRDDLRNKR+ELAGELLEREL + IKHAE+R+++
Sbjct: 388  SVQKACFLAYMVKCLLECYKGRRKVDNRDDLRNKRLELAGELLERELRIQIKHAERRMMR 447

Query: 593  AIQRDLYRDREVQTIDHYLDASIITNGLSRAFSTGAWVHPFKRMERIAGVVATLRRTNPL 414
            ++QRDL + R++QTIDHYLDASIITNGLSRAFSTGAW HP+KRMERI+G+VATLRRTNPL
Sbjct: 448  SMQRDLDKGRDLQTIDHYLDASIITNGLSRAFSTGAWSHPYKRMERISGIVATLRRTNPL 507

Query: 413  QAVSDMRKTRQQVSYTGRVGDARYPHPSHWGKVCFISTPDGENCGLVKNLAGLGLVSINI 234
            QA++DMRKTRQQVSYTGRVGDARYPHPSHWGK+CF+STPDGENCGLVKNLA LGLVS  +
Sbjct: 508  QAIADMRKTRQQVSYTGRVGDARYPHPSHWGKICFLSTPDGENCGLVKNLASLGLVSTEV 567

Query: 233  LEQETLLQKFHECGMEKLVDDISCLHDGKHKIFLDGDWVGVCKDSSAFVAKLXXXXXRKE 54
            L+QE LL+KF ECGME+L DD S L DGKHKIFLDGD VGVC+DSS+FV+ L     + E
Sbjct: 568  LDQEGLLKKFRECGMEQLADDTSSLLDGKHKIFLDGDLVGVCRDSSSFVSMLRRRRQKNE 627

Query: 53   VPHQIEIKRDKHHGEVR 3
            VPHQ+EIK D+ +GEVR
Sbjct: 628  VPHQVEIKMDQSNGEVR 644


>ref|XP_009787512.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2 isoform X2
            [Nicotiana sylvestris]
          Length = 1216

 Score =  703 bits (1815), Expect = 0.0
 Identities = 346/498 (69%), Positives = 406/498 (81%), Gaps = 2/498 (0%)
 Frame = -1

Query: 1490 AHLQNMTYSSRIKVETHLQVYTEGLSRSDKFKTGVDKFVEKTILNEYQTDVNFGRLPVMV 1311
            A LQNMTYS+RI VETH+QVYT+ L RSDKFKTGVD+FV+K    E + DV  GR+PVMV
Sbjct: 162  ARLQNMTYSARIMVETHVQVYTKKLVRSDKFKTGVDQFVDKECEMEDKRDVLIGRIPVMV 221

Query: 1310 KSDLCWMSKREERDCEFDQGGYFLIKGAEKTFIAQEQICYRRLWVSKDPTWTIAYRPVPK 1131
             S+LCWM+  ++ DCEFD GGYF++KGAEKTFIAQEQIC +RLWVS  PTWT+AYRPV K
Sbjct: 222  NSELCWMNGVDKPDCEFDHGGYFIVKGAEKTFIAQEQICLKRLWVSNSPTWTVAYRPVAK 281

Query: 1130 RKRVYIKLVP--KVEHLIAGQKILTVYFYVVELPIWLLFFALGVPNDREVVKLIGLDTEE 957
            R RVYIKL    K+EH+   +K LTVYF V E+PIW+LFFALGV +DREVV LI +D E 
Sbjct: 282  RNRVYIKLAETLKLEHIKGAEKALTVYFSVAEMPIWILFFALGVSSDREVVNLIDVDIE- 340

Query: 956  DPDIVNILVASIYDADKKFEGFRKEGNAIKHIKELMQNCRFPPTESVEECIRNYLFPNLR 777
            D +IVNILVASI+DADKK E FRK   A+ ++  L++ CRFPP ESVEECI+ YLFPNL 
Sbjct: 341  DTNIVNILVASIHDADKKCEDFRKGKKALAYVDRLIKGCRFPPQESVEECIQQYLFPNLS 400

Query: 776  SPGQKAYFLAYMVKCLLEAFRGRRKVDNRDDLRNKRVELAGELLERELMVHIKHAEKRLI 597
               QKA FL YMVK LL AF GRRKVDNRDD RNKR+ELAGELLEREL  HIKHAE+R++
Sbjct: 401  GLKQKARFLGYMVKSLLHAFIGRRKVDNRDDFRNKRLELAGELLERELRAHIKHAERRML 460

Query: 596  KAIQRDLYRDREVQTIDHYLDASIITNGLSRAFSTGAWVHPFKRMERIAGVVATLRRTNP 417
            KA+QRDLY DR+VQ I+HYLDASIITNGLSRAFSTG W HP+KRMER++GVVAT+RRTNP
Sbjct: 461  KAMQRDLYGDRQVQPIEHYLDASIITNGLSRAFSTGHWCHPYKRMERVSGVVATIRRTNP 520

Query: 416  LQAVSDMRKTRQQVSYTGRVGDARYPHPSHWGKVCFISTPDGENCGLVKNLAGLGLVSIN 237
            LQ  +DMRKTRQQV+YTG+VGDARYPHPSHWGKVCF+STPDGENCGLVKNLA +GLVS  
Sbjct: 521  LQMTADMRKTRQQVTYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLASMGLVSTT 580

Query: 236  ILEQETLLQKFHECGMEKLVDDISCLHDGKHKIFLDGDWVGVCKDSSAFVAKLXXXXXRK 57
            IL  + LL+  + CGM+KLVDD +    GK K+ L+GDWVG+C+DS+ FV+KL     R 
Sbjct: 581  IL--KPLLETLYRCGMQKLVDDSATSLHGKQKVLLNGDWVGICEDSAFFVSKLRRKRRRN 638

Query: 56   EVPHQIEIKRDKHHGEVR 3
            EVPHQ+E+KRD+  GEVR
Sbjct: 639  EVPHQVEVKRDEQQGEVR 656


>ref|XP_009787511.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2 isoform X1
            [Nicotiana sylvestris]
          Length = 1226

 Score =  703 bits (1815), Expect = 0.0
 Identities = 346/498 (69%), Positives = 406/498 (81%), Gaps = 2/498 (0%)
 Frame = -1

Query: 1490 AHLQNMTYSSRIKVETHLQVYTEGLSRSDKFKTGVDKFVEKTILNEYQTDVNFGRLPVMV 1311
            A LQNMTYS+RI VETH+QVYT+ L RSDKFKTGVD+FV+K    E + DV  GR+PVMV
Sbjct: 172  ARLQNMTYSARIMVETHVQVYTKKLVRSDKFKTGVDQFVDKECEMEDKRDVLIGRIPVMV 231

Query: 1310 KSDLCWMSKREERDCEFDQGGYFLIKGAEKTFIAQEQICYRRLWVSKDPTWTIAYRPVPK 1131
             S+LCWM+  ++ DCEFD GGYF++KGAEKTFIAQEQIC +RLWVS  PTWT+AYRPV K
Sbjct: 232  NSELCWMNGVDKPDCEFDHGGYFIVKGAEKTFIAQEQICLKRLWVSNSPTWTVAYRPVAK 291

Query: 1130 RKRVYIKLVP--KVEHLIAGQKILTVYFYVVELPIWLLFFALGVPNDREVVKLIGLDTEE 957
            R RVYIKL    K+EH+   +K LTVYF V E+PIW+LFFALGV +DREVV LI +D E 
Sbjct: 292  RNRVYIKLAETLKLEHIKGAEKALTVYFSVAEMPIWILFFALGVSSDREVVNLIDVDIE- 350

Query: 956  DPDIVNILVASIYDADKKFEGFRKEGNAIKHIKELMQNCRFPPTESVEECIRNYLFPNLR 777
            D +IVNILVASI+DADKK E FRK   A+ ++  L++ CRFPP ESVEECI+ YLFPNL 
Sbjct: 351  DTNIVNILVASIHDADKKCEDFRKGKKALAYVDRLIKGCRFPPQESVEECIQQYLFPNLS 410

Query: 776  SPGQKAYFLAYMVKCLLEAFRGRRKVDNRDDLRNKRVELAGELLERELMVHIKHAEKRLI 597
               QKA FL YMVK LL AF GRRKVDNRDD RNKR+ELAGELLEREL  HIKHAE+R++
Sbjct: 411  GLKQKARFLGYMVKSLLHAFIGRRKVDNRDDFRNKRLELAGELLERELRAHIKHAERRML 470

Query: 596  KAIQRDLYRDREVQTIDHYLDASIITNGLSRAFSTGAWVHPFKRMERIAGVVATLRRTNP 417
            KA+QRDLY DR+VQ I+HYLDASIITNGLSRAFSTG W HP+KRMER++GVVAT+RRTNP
Sbjct: 471  KAMQRDLYGDRQVQPIEHYLDASIITNGLSRAFSTGHWCHPYKRMERVSGVVATIRRTNP 530

Query: 416  LQAVSDMRKTRQQVSYTGRVGDARYPHPSHWGKVCFISTPDGENCGLVKNLAGLGLVSIN 237
            LQ  +DMRKTRQQV+YTG+VGDARYPHPSHWGKVCF+STPDGENCGLVKNLA +GLVS  
Sbjct: 531  LQMTADMRKTRQQVTYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLASMGLVSTT 590

Query: 236  ILEQETLLQKFHECGMEKLVDDISCLHDGKHKIFLDGDWVGVCKDSSAFVAKLXXXXXRK 57
            IL  + LL+  + CGM+KLVDD +    GK K+ L+GDWVG+C+DS+ FV+KL     R 
Sbjct: 591  IL--KPLLETLYRCGMQKLVDDSATSLHGKQKVLLNGDWVGICEDSAFFVSKLRRKRRRN 648

Query: 56   EVPHQIEIKRDKHHGEVR 3
            EVPHQ+E+KRD+  GEVR
Sbjct: 649  EVPHQVEVKRDEQQGEVR 666


>ref|XP_009605686.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
            [Nicotiana tomentosiformis]
          Length = 1220

 Score =  703 bits (1814), Expect = 0.0
 Identities = 347/498 (69%), Positives = 406/498 (81%), Gaps = 2/498 (0%)
 Frame = -1

Query: 1490 AHLQNMTYSSRIKVETHLQVYTEGLSRSDKFKTGVDKFVEKTILNEYQTDVNFGRLPVMV 1311
            A LQNMTYS+RI VETH+QVYT+ L RSDKFKTGVD+FV+K    E + DV  GR+PVMV
Sbjct: 166  ARLQNMTYSARIMVETHVQVYTKKLVRSDKFKTGVDQFVDKECEMEDKRDVLIGRIPVMV 225

Query: 1310 KSDLCWMSKREERDCEFDQGGYFLIKGAEKTFIAQEQICYRRLWVSKDPTWTIAYRPVPK 1131
             S+LCWM+  ++ DCEFD GGYF++KGAEKTFIAQEQIC +RLWVS  PTWT+AYRPV K
Sbjct: 226  NSELCWMNGVDKPDCEFDHGGYFIVKGAEKTFIAQEQICLKRLWVSNSPTWTVAYRPVAK 285

Query: 1130 RKRVYIKLVP--KVEHLIAGQKILTVYFYVVELPIWLLFFALGVPNDREVVKLIGLDTEE 957
            R RVYIKL    K+EH+   +K LTVYF V E+PIW+LFFALGV +DREVV LI +D E 
Sbjct: 286  RNRVYIKLAETLKLEHIKGVEKALTVYFSVAEMPIWILFFALGVSSDREVVDLIDVDIE- 344

Query: 956  DPDIVNILVASIYDADKKFEGFRKEGNAIKHIKELMQNCRFPPTESVEECIRNYLFPNLR 777
            D +IVNILVASI+DADKK E FRK   A+ ++  L++ CRFPP ESVEECI+ YLFPNL 
Sbjct: 345  DTNIVNILVASIHDADKKCEDFRKGKKALAYVDRLIKGCRFPPQESVEECIKQYLFPNLS 404

Query: 776  SPGQKAYFLAYMVKCLLEAFRGRRKVDNRDDLRNKRVELAGELLERELMVHIKHAEKRLI 597
               QKA FL YMVK LL AF GRRKVDNRDD RNKR+ELAGELLEREL  HIKHAE+R++
Sbjct: 405  GLKQKARFLGYMVKSLLHAFIGRRKVDNRDDFRNKRLELAGELLERELRAHIKHAERRML 464

Query: 596  KAIQRDLYRDREVQTIDHYLDASIITNGLSRAFSTGAWVHPFKRMERIAGVVATLRRTNP 417
            KA+QRDLY DR+VQ I+HYLDASIITNGLSRAFSTG W HP+KRMER++GVVAT+RRTNP
Sbjct: 465  KAMQRDLYGDRQVQPIEHYLDASIITNGLSRAFSTGHWCHPYKRMERVSGVVATIRRTNP 524

Query: 416  LQAVSDMRKTRQQVSYTGRVGDARYPHPSHWGKVCFISTPDGENCGLVKNLAGLGLVSIN 237
            LQ  +DMRKTRQQV+YTG+VGDARYPHPSHWGKVCF+STPDGENCGLVKNLA +GLVS  
Sbjct: 525  LQMTADMRKTRQQVTYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLASMGLVSTT 584

Query: 236  ILEQETLLQKFHECGMEKLVDDISCLHDGKHKIFLDGDWVGVCKDSSAFVAKLXXXXXRK 57
            IL  + LL+  + CGM+KLVDD +    GK K+ L+GDWVGVC+DS+ FV+KL     R 
Sbjct: 585  IL--KPLLETLYRCGMQKLVDDSAISLHGKQKVLLNGDWVGVCEDSALFVSKLRRKRRRN 642

Query: 56   EVPHQIEIKRDKHHGEVR 3
            EVPHQ+E+KRD+  GEVR
Sbjct: 643  EVPHQVEVKRDEQQGEVR 660


>emb|CDP07172.1| unnamed protein product [Coffea canephora]
          Length = 1230

 Score =  685 bits (1767), Expect = 0.0
 Identities = 331/498 (66%), Positives = 401/498 (80%), Gaps = 2/498 (0%)
 Frame = -1

Query: 1490 AHLQNMTYSSRIKVETHLQVYTEGLSRSDKFKTGVDKFVEKTILNEYQTDVNFGRLPVMV 1311
            A LQNMTYS+RIKVETH+QVYT+ L RSDK KTG+ ++VE     E + ++  GRLPVMV
Sbjct: 176  ARLQNMTYSARIKVETHVQVYTKKLLRSDKAKTGMAEYVENHCEKEEKKEIIIGRLPVMV 235

Query: 1310 KSDLCWMSKREERDCEFDQGGYFLIKGAEKTFIAQEQICYRRLWVSKDPTWTIAYRPVPK 1131
            +S+LCWM++ E+ DCEFD GGYF+IKGAEKTFIAQEQIC  RLW+S+ P W ++YRP+ K
Sbjct: 236  RSELCWMNEAEKDDCEFDHGGYFIIKGAEKTFIAQEQICMIRLWLSRVPNWMVSYRPIAK 295

Query: 1130 RKRVYIKLVP--KVEHLIAGQKILTVYFYVVELPIWLLFFALGVPNDREVVKLIGLDTEE 957
            RKRVY+KLV   K E +I G+K+L+VYF V E+P+W+LFFALG  +DREVV LI LD E 
Sbjct: 296  RKRVYLKLVSNSKFESIIGGEKVLSVYFAVAEMPVWILFFALGASSDREVVDLINLDIE- 354

Query: 956  DPDIVNILVASIYDADKKFEGFRKEGNAIKHIKELMQNCRFPPTESVEECIRNYLFPNLR 777
            D  I NIL  SIYDAD     FR+  NA+ H+ +L++NC+FPP E VEECIRN LFPNL 
Sbjct: 355  DTKIANILTESIYDADDNCTDFRRGKNALDHVHKLLKNCKFPPAEPVEECIRNLLFPNLT 414

Query: 776  SPGQKAYFLAYMVKCLLEAFRGRRKVDNRDDLRNKRVELAGELLERELMVHIKHAEKRLI 597
               QKA FL YMVKCLLEA+ GRRKVDNRDD RNKR+ELA ELLEREL VH+KHAE+R++
Sbjct: 415  GFKQKARFLGYMVKCLLEAYTGRRKVDNRDDFRNKRLELASELLERELKVHLKHAERRMV 474

Query: 596  KAIQRDLYRDREVQTIDHYLDASIITNGLSRAFSTGAWVHPFKRMERIAGVVATLRRTNP 417
            KAIQ+D+Y D E++ I+ Y+DASII+NGLSRAFSTGAW HP+K+MER++GVVATLRRTNP
Sbjct: 475  KAIQKDIYGDHELRGIETYVDASIISNGLSRAFSTGAWSHPYKKMERVSGVVATLRRTNP 534

Query: 416  LQAVSDMRKTRQQVSYTGRVGDARYPHPSHWGKVCFISTPDGENCGLVKNLAGLGLVSIN 237
            LQ  +DMRKTRQQVSYTGRVGDARYPHPSHWGK+CF+STPDGENCGLVKNLA LGLVS  
Sbjct: 535  LQMTADMRKTRQQVSYTGRVGDARYPHPSHWGKICFLSTPDGENCGLVKNLASLGLVSTT 594

Query: 236  ILEQETLLQKFHECGMEKLVDDISCLHDGKHKIFLDGDWVGVCKDSSAFVAKLXXXXXRK 57
            +L  E+LL K  +CG++ L+DD S     +HKIFLDGDW+G CKDS+ FVA+L      K
Sbjct: 595  VL--ESLLDKLLDCGLKLLLDDTSSSTHEEHKIFLDGDWIGTCKDSALFVAELKNKRRSK 652

Query: 56   EVPHQIEIKRDKHHGEVR 3
            E+P Q+EIKRD+ H E+R
Sbjct: 653  EIPQQVEIKRDEKHREIR 670


>ref|XP_004236361.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2 [Solanum
            lycopersicum]
          Length = 1217

 Score =  685 bits (1767), Expect = 0.0
 Identities = 339/498 (68%), Positives = 402/498 (80%), Gaps = 2/498 (0%)
 Frame = -1

Query: 1490 AHLQNMTYSSRIKVETHLQVYTEGLSRSDKFKTGVDKFVEKTILNEYQTDVNFGRLPVMV 1311
            A LQNMTYS+RI VETH+QVYT+ L RSDKFKTGVD+FV+K    E + DV  GR+PVMV
Sbjct: 164  ARLQNMTYSARIMVETHVQVYTKKLVRSDKFKTGVDRFVDKEWEVEDKRDVLIGRIPVMV 223

Query: 1310 KSDLCWMSKREERDCEFDQGGYFLIKGAEKTFIAQEQICYRRLWVSKDPTWTIAYRPVPK 1131
             S+LCWM+  ++ DCEFD GGYF++KGAEKTFIAQEQ+C +RLWVS +PTW + YRP  K
Sbjct: 224  NSELCWMNGVDKLDCEFDHGGYFIVKGAEKTFIAQEQLCLKRLWVSNNPTWMVGYRPGEK 283

Query: 1130 RKRVYIKLVP--KVEHLIAGQKILTVYFYVVELPIWLLFFALGVPNDREVVKLIGLDTEE 957
            RKRVYIKL    K+EH+  G+K L+VY  + E+PIW+LFFALGV +DREVV LI +D E 
Sbjct: 284  RKRVYIKLTETLKLEHIKGGEKALSVYI-LAEMPIWVLFFALGVSSDREVVNLIDVDIE- 341

Query: 956  DPDIVNILVASIYDADKKFEGFRKEGNAIKHIKELMQNCRFPPTESVEECIRNYLFPNLR 777
            D  IVNILVASI++ADK  E FRK   A+ ++  L++NC+FPP ESVEECI  YLFPNL 
Sbjct: 342  DTTIVNILVASIHEADKNCEDFRKGKKALAYVDRLIKNCKFPPQESVEECINAYLFPNLS 401

Query: 776  SPGQKAYFLAYMVKCLLEAFRGRRKVDNRDDLRNKRVELAGELLERELMVHIKHAEKRLI 597
               QKA FL YMVKCLL +F GRRKVDNRDD RNKR+ELAGELLEREL  HIKHAE+R++
Sbjct: 402  GFKQKARFLGYMVKCLLHSFIGRRKVDNRDDFRNKRLELAGELLERELRAHIKHAERRMV 461

Query: 596  KAIQRDLYRDREVQTIDHYLDASIITNGLSRAFSTGAWVHPFKRMERIAGVVATLRRTNP 417
            KA+QRDLY DR+VQ I+HYLDASIITNGLSRAFSTG W HP+KRMER++GVVATLRRTNP
Sbjct: 462  KAMQRDLYGDRQVQPIEHYLDASIITNGLSRAFSTGHWCHPYKRMERVSGVVATLRRTNP 521

Query: 416  LQAVSDMRKTRQQVSYTGRVGDARYPHPSHWGKVCFISTPDGENCGLVKNLAGLGLVSIN 237
            LQ  +DMRK+RQQV+YTG+VGDARYPHPSHWGK+CF+STPDGENCGLVKNLA +GLVS  
Sbjct: 522  LQMTADMRKSRQQVTYTGKVGDARYPHPSHWGKLCFLSTPDGENCGLVKNLASMGLVSTI 581

Query: 236  ILEQETLLQKFHECGMEKLVDDISCLHDGKHKIFLDGDWVGVCKDSSAFVAKLXXXXXRK 57
            IL  +  L+    CGM+KLVDD S    GK K+ LDG+WVGVC+DS+ FV+KL     R 
Sbjct: 582  IL--KPFLETLFRCGMQKLVDDCSTSLHGKQKVLLDGEWVGVCEDSALFVSKLRRKRRRN 639

Query: 56   EVPHQIEIKRDKHHGEVR 3
            EVPHQ+E+KRD+  GEVR
Sbjct: 640  EVPHQVEVKRDELQGEVR 657


>ref|XP_006351506.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
            [Solanum tuberosum]
          Length = 1217

 Score =  684 bits (1765), Expect = 0.0
 Identities = 338/498 (67%), Positives = 402/498 (80%), Gaps = 2/498 (0%)
 Frame = -1

Query: 1490 AHLQNMTYSSRIKVETHLQVYTEGLSRSDKFKTGVDKFVEKTILNEYQTDVNFGRLPVMV 1311
            A LQNMTYS+RI VETH+QVYT+ L RSDKFKTGVD+FV+K    E + DV  GR+PVMV
Sbjct: 164  ARLQNMTYSARIMVETHVQVYTKKLVRSDKFKTGVDQFVDKECEVEDKRDVLIGRIPVMV 223

Query: 1310 KSDLCWMSKREERDCEFDQGGYFLIKGAEKTFIAQEQICYRRLWVSKDPTWTIAYRPVPK 1131
             S+LCWM+  ++ DCEFD GGYF++KGAEKTFIAQEQ+C +RLWVS +PTW + YRP  K
Sbjct: 224  NSELCWMNGVDKLDCEFDHGGYFIVKGAEKTFIAQEQLCLKRLWVSNNPTWMVGYRPGEK 283

Query: 1130 RKRVYIKLVP--KVEHLIAGQKILTVYFYVVELPIWLLFFALGVPNDREVVKLIGLDTEE 957
            RKRVYIKL    K+EH+  G+K L+VY  + E+PIW+LFFALGV +DREVV LI +D E 
Sbjct: 284  RKRVYIKLTETLKLEHIKGGEKALSVYI-LAEMPIWVLFFALGVSSDREVVNLIDVDIE- 341

Query: 956  DPDIVNILVASIYDADKKFEGFRKEGNAIKHIKELMQNCRFPPTESVEECIRNYLFPNLR 777
            D  IVNILVASI++ADK  E FRK   A+ ++  L++NC+FPP ESVEECI  YLFPNL 
Sbjct: 342  DTTIVNILVASIHEADKNCEDFRKGKKALAYVDRLIKNCKFPPQESVEECINAYLFPNLS 401

Query: 776  SPGQKAYFLAYMVKCLLEAFRGRRKVDNRDDLRNKRVELAGELLERELMVHIKHAEKRLI 597
               QKA FL YMVKCLL +F GRRKVDNRDD RNKR+ELAGELLEREL  HIKHAE+R++
Sbjct: 402  GFKQKARFLGYMVKCLLHSFIGRRKVDNRDDFRNKRLELAGELLERELRAHIKHAERRMV 461

Query: 596  KAIQRDLYRDREVQTIDHYLDASIITNGLSRAFSTGAWVHPFKRMERIAGVVATLRRTNP 417
            KA+QRDLY DR+VQ I+HYLDASIITNGLSRAFSTG W HP+KRMER++GVVATLRRTNP
Sbjct: 462  KAMQRDLYGDRQVQPIEHYLDASIITNGLSRAFSTGHWCHPYKRMERVSGVVATLRRTNP 521

Query: 416  LQAVSDMRKTRQQVSYTGRVGDARYPHPSHWGKVCFISTPDGENCGLVKNLAGLGLVSIN 237
            LQ  +DMRK+RQQV+YTG+VGDARYPHPSHWGK+CF+STPDGENCGLVKNLA +GLVS  
Sbjct: 522  LQMTADMRKSRQQVTYTGKVGDARYPHPSHWGKLCFLSTPDGENCGLVKNLASMGLVSTI 581

Query: 236  ILEQETLLQKFHECGMEKLVDDISCLHDGKHKIFLDGDWVGVCKDSSAFVAKLXXXXXRK 57
            IL  +  L+    CGM+KLVDD +    GK K+ LDG+WVGVC+DS+ FV+KL     R 
Sbjct: 582  IL--KPFLETLFRCGMQKLVDDCATSLHGKQKVLLDGEWVGVCEDSALFVSKLRRKRRRN 639

Query: 56   EVPHQIEIKRDKHHGEVR 3
            EVPHQ+E+KRD+  GEVR
Sbjct: 640  EVPHQVEVKRDELQGEVR 657


>gb|AAY68206.1| RNA polymerase IV second largest subunit [Solanum lycopersicum]
          Length = 1123

 Score =  683 bits (1763), Expect = 0.0
 Identities = 339/498 (68%), Positives = 401/498 (80%), Gaps = 2/498 (0%)
 Frame = -1

Query: 1490 AHLQNMTYSSRIKVETHLQVYTEGLSRSDKFKTGVDKFVEKTILNEYQTDVNFGRLPVMV 1311
            A LQNMTYS+RI VETH+QVYT+ L RSDKFKTGVD+FV+K    E + DV  GR+PVMV
Sbjct: 158  ARLQNMTYSARIMVETHVQVYTKKLVRSDKFKTGVDRFVDKEWEVEGKRDVLIGRIPVMV 217

Query: 1310 KSDLCWMSKREERDCEFDQGGYFLIKGAEKTFIAQEQICYRRLWVSKDPTWTIAYRPVPK 1131
             S+LCWM+  ++ DCEFD GGYF+ KGAEKTFIAQEQ+C +RLWVS +PTW + YRP  K
Sbjct: 218  NSELCWMNGVDKLDCEFDHGGYFIAKGAEKTFIAQEQLCLKRLWVSNNPTWMVGYRPGEK 277

Query: 1130 RKRVYIKLVP--KVEHLIAGQKILTVYFYVVELPIWLLFFALGVPNDREVVKLIGLDTEE 957
            RKRVYIKL    K+EH+  G+K L+VY  + E+PIW+LFFALGV +DREVV LI +D E 
Sbjct: 278  RKRVYIKLTETLKLEHIKGGEKALSVYI-LAEMPIWVLFFALGVSSDREVVNLIDVDIE- 335

Query: 956  DPDIVNILVASIYDADKKFEGFRKEGNAIKHIKELMQNCRFPPTESVEECIRNYLFPNLR 777
            D  IVNILVASI++ADK  E FRK   A+ ++  L++NC+FPP ESVEECI  YLFPNL 
Sbjct: 336  DTTIVNILVASIHEADKNCEDFRKGKKALAYVDRLIKNCKFPPQESVEECINAYLFPNLS 395

Query: 776  SPGQKAYFLAYMVKCLLEAFRGRRKVDNRDDLRNKRVELAGELLERELMVHIKHAEKRLI 597
               QKA FL YMVKCLL +F GRRKVDNRDD RNKR+ELAGELLEREL  HIKHAE+R++
Sbjct: 396  GFKQKARFLGYMVKCLLHSFIGRRKVDNRDDFRNKRLELAGELLERELRAHIKHAERRMV 455

Query: 596  KAIQRDLYRDREVQTIDHYLDASIITNGLSRAFSTGAWVHPFKRMERIAGVVATLRRTNP 417
            KA+QRDLY DR+VQ I+HYLDASIITNGLSRAFSTG W HP+KRMER++GVVATLRRTNP
Sbjct: 456  KAMQRDLYGDRQVQPIEHYLDASIITNGLSRAFSTGHWCHPYKRMERVSGVVATLRRTNP 515

Query: 416  LQAVSDMRKTRQQVSYTGRVGDARYPHPSHWGKVCFISTPDGENCGLVKNLAGLGLVSIN 237
            LQ  +DMRK+RQQV+YTG+VGDARYPHPSHWGK+CF+STPDGENCGLVKNLA +GLVS  
Sbjct: 516  LQMTADMRKSRQQVTYTGKVGDARYPHPSHWGKLCFLSTPDGENCGLVKNLASMGLVSTI 575

Query: 236  ILEQETLLQKFHECGMEKLVDDISCLHDGKHKIFLDGDWVGVCKDSSAFVAKLXXXXXRK 57
            IL  +  L+    CGM+KLVDD S    GK K+ LDG+WVGVC+DS+ FV+KL     R 
Sbjct: 576  IL--KPFLETLFRCGMQKLVDDCSTSLHGKQKVLLDGEWVGVCEDSALFVSKLRRKRRRN 633

Query: 56   EVPHQIEIKRDKHHGEVR 3
            EVPHQ+E+KRD+  GEVR
Sbjct: 634  EVPHQVEVKRDELQGEVR 651


>emb|CBI21137.3| unnamed protein product [Vitis vinifera]
          Length = 1220

 Score =  675 bits (1741), Expect = 0.0
 Identities = 332/502 (66%), Positives = 402/502 (80%), Gaps = 6/502 (1%)
 Frame = -1

Query: 1490 AHLQNMTYSSRIKVETHLQVYTEGLSRSDKFKTGVD-KFVEKTILNEYQTDVNFGRLPVM 1314
            A LQNMTYSSR+K + H QVYT+ L RSDK+KTG D K+VEK ++ E   D+  GR+PVM
Sbjct: 176  ARLQNMTYSSRMKAQVHFQVYTQKLVRSDKYKTGKDNKYVEKKVIFEDNRDILIGRIPVM 235

Query: 1313 VKSDLCWMSKREERDCEFDQGGYFLIKGAEKTFIAQEQICYRRLWVSKDPTWTIAYRPVP 1134
            VKS+LCWM+  E  DCE+D GGYFLIKGAEKTFIAQEQIC +RLWVS +PTW +AYRP+ 
Sbjct: 236  VKSELCWMNGVERGDCEYDHGGYFLIKGAEKTFIAQEQICLKRLWVSSNPTWMVAYRPIW 295

Query: 1133 KRKRVYIKLVP-KVEHLIAGQKILTVYFYVVELPIWLLFFALGVPNDREVVKLIGLDTEE 957
            KRKRVY+KL P K E+   G+K+LTVYF   E+PIW+LFFALG  +D+EVV LI  + + 
Sbjct: 296  KRKRVYVKLEPPKDENNRGGEKVLTVYFSSTEIPIWILFFALGASSDKEVVDLIDFNID- 354

Query: 956  DPDIVNILVASIYDADKKFEG----FRKEGNAIKHIKELMQNCRFPPTESVEECIRNYLF 789
            D  I NILVASI++AD++ E     FR++GNAI  + +L+++C+FPP ES++ECI  YLF
Sbjct: 355  DAGISNILVASIHEADREAEKKGMYFRRQGNAISFVDKLVKSCKFPPGESIQECISKYLF 414

Query: 788  PNLRSPGQKAYFLAYMVKCLLEAFRGRRKVDNRDDLRNKRVELAGELLERELMVHIKHAE 609
            PN     QKA FL YMVKCLL+A+ GRRK DNRDD RNKR+ELAGELLEREL VHI+HAE
Sbjct: 415  PNFSGVKQKARFLGYMVKCLLQAYTGRRKCDNRDDFRNKRLELAGELLERELRVHIRHAE 474

Query: 608  KRLIKAIQRDLYRDREVQTIDHYLDASIITNGLSRAFSTGAWVHPFKRMERIAGVVATLR 429
            +R++KA+QR+LY DR+++ I++YLDASIITNGLSRAFSTG W HPFKRMERI+GVVATLR
Sbjct: 475  RRMVKAMQRELYGDRDLRPIENYLDASIITNGLSRAFSTGQWSHPFKRMERISGVVATLR 534

Query: 428  RTNPLQAVSDMRKTRQQVSYTGRVGDARYPHPSHWGKVCFISTPDGENCGLVKNLAGLGL 249
            RTNPLQ  +DMRKTRQQV YTG+VGDARYPHPSHWGKVCF+STPDGENCGLVKNLA  GL
Sbjct: 535  RTNPLQMTADMRKTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLAITGL 594

Query: 248  VSINILEQETLLQKFHECGMEKLVDDISCLHDGKHKIFLDGDWVGVCKDSSAFVAKLXXX 69
            VS  +L  + L+ K  +CGMEKLVDD S    GK+K+FLDGDWVGVC+D  +FV +L   
Sbjct: 595  VSTEVL--DPLVDKLFDCGMEKLVDDTSTKLSGKNKVFLDGDWVGVCEDPISFVVELRTK 652

Query: 68   XXRKEVPHQIEIKRDKHHGEVR 3
               KE+P Q+EIKRD+  GEVR
Sbjct: 653  RRHKELPQQVEIKRDEQQGEVR 674


>ref|XP_002283296.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
            [Vitis vinifera] gi|731386102|ref|XP_010648748.1|
            PREDICTED: DNA-directed RNA polymerases IV and V subunit
            2-like [Vitis vinifera]
          Length = 1198

 Score =  675 bits (1741), Expect = 0.0
 Identities = 332/502 (66%), Positives = 402/502 (80%), Gaps = 6/502 (1%)
 Frame = -1

Query: 1490 AHLQNMTYSSRIKVETHLQVYTEGLSRSDKFKTGVD-KFVEKTILNEYQTDVNFGRLPVM 1314
            A LQNMTYSSR+K + H QVYT+ L RSDK+KTG D K+VEK ++ E   D+  GR+PVM
Sbjct: 140  ARLQNMTYSSRMKAQVHFQVYTQKLVRSDKYKTGKDNKYVEKKVIFEDNRDILIGRIPVM 199

Query: 1313 VKSDLCWMSKREERDCEFDQGGYFLIKGAEKTFIAQEQICYRRLWVSKDPTWTIAYRPVP 1134
            VKS+LCWM+  E  DCE+D GGYFLIKGAEKTFIAQEQIC +RLWVS +PTW +AYRP+ 
Sbjct: 200  VKSELCWMNGVERGDCEYDHGGYFLIKGAEKTFIAQEQICLKRLWVSSNPTWMVAYRPIW 259

Query: 1133 KRKRVYIKLVP-KVEHLIAGQKILTVYFYVVELPIWLLFFALGVPNDREVVKLIGLDTEE 957
            KRKRVY+KL P K E+   G+K+LTVYF   E+PIW+LFFALG  +D+EVV LI  + + 
Sbjct: 260  KRKRVYVKLEPPKDENNRGGEKVLTVYFSSTEIPIWILFFALGASSDKEVVDLIDFNID- 318

Query: 956  DPDIVNILVASIYDADKKFEG----FRKEGNAIKHIKELMQNCRFPPTESVEECIRNYLF 789
            D  I NILVASI++AD++ E     FR++GNAI  + +L+++C+FPP ES++ECI  YLF
Sbjct: 319  DAGISNILVASIHEADREAEKKGMYFRRQGNAISFVDKLVKSCKFPPGESIQECISKYLF 378

Query: 788  PNLRSPGQKAYFLAYMVKCLLEAFRGRRKVDNRDDLRNKRVELAGELLERELMVHIKHAE 609
            PN     QKA FL YMVKCLL+A+ GRRK DNRDD RNKR+ELAGELLEREL VHI+HAE
Sbjct: 379  PNFSGVKQKARFLGYMVKCLLQAYTGRRKCDNRDDFRNKRLELAGELLERELRVHIRHAE 438

Query: 608  KRLIKAIQRDLYRDREVQTIDHYLDASIITNGLSRAFSTGAWVHPFKRMERIAGVVATLR 429
            +R++KA+QR+LY DR+++ I++YLDASIITNGLSRAFSTG W HPFKRMERI+GVVATLR
Sbjct: 439  RRMVKAMQRELYGDRDLRPIENYLDASIITNGLSRAFSTGQWSHPFKRMERISGVVATLR 498

Query: 428  RTNPLQAVSDMRKTRQQVSYTGRVGDARYPHPSHWGKVCFISTPDGENCGLVKNLAGLGL 249
            RTNPLQ  +DMRKTRQQV YTG+VGDARYPHPSHWGKVCF+STPDGENCGLVKNLA  GL
Sbjct: 499  RTNPLQMTADMRKTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLAITGL 558

Query: 248  VSINILEQETLLQKFHECGMEKLVDDISCLHDGKHKIFLDGDWVGVCKDSSAFVAKLXXX 69
            VS  +L  + L+ K  +CGMEKLVDD S    GK+K+FLDGDWVGVC+D  +FV +L   
Sbjct: 559  VSTEVL--DPLVDKLFDCGMEKLVDDTSTKLSGKNKVFLDGDWVGVCEDPISFVVELRTK 616

Query: 68   XXRKEVPHQIEIKRDKHHGEVR 3
               KE+P Q+EIKRD+  GEVR
Sbjct: 617  RRHKELPQQVEIKRDEQQGEVR 638


>emb|CDP09677.1| unnamed protein product [Coffea canephora]
          Length = 1213

 Score =  672 bits (1735), Expect = 0.0
 Identities = 329/506 (65%), Positives = 399/506 (78%), Gaps = 10/506 (1%)
 Frame = -1

Query: 1490 AHLQNMTYSSRIKVETHLQVYTEGLSRSDKFKTGVDKFVEKTILNEYQTDVNFGRLPVMV 1311
            A LQ+MTYS+RIKVETH+QVYT+ L  SDK KTG    +E     E + +V  GRLPVMV
Sbjct: 151  ARLQSMTYSARIKVETHVQVYTKKLLASDKAKTGRAVHIENECEKEEKREVIIGRLPVMV 210

Query: 1310 KSDLCWMSKREERDCEFDQGGYFLIKGAEKTFIAQEQICYRRLWVSKDPTWTIAYRPVPK 1131
            +SDLCWM+  E+ DCEFD GGYF+IKGAEKTF+AQEQIC  RLW+S  P WT++YRPV +
Sbjct: 211  RSDLCWMNGVEKDDCEFDHGGYFIIKGAEKTFVAQEQICLTRLWLSSVPCWTVSYRPVAR 270

Query: 1130 RKRVYIKLVP--KVEHLIAGQKILTVYFYVVELPIWLLFFALGVPNDREVVKLIGLDTEE 957
            RKRVY+KLV   K  +LI GQ++L+VYF + E+P+W+LFFALG  +DREVV LI L+ E 
Sbjct: 271  RKRVYLKLVDESKFANLIGGQRVLSVYFVIAEMPVWILFFALGASSDREVVDLIDLNIE- 329

Query: 956  DPDIVNILVASIYDADKKFE--------GFRKEGNAIKHIKELMQNCRFPPTESVEECIR 801
            D  I NIL  SIY AD KFE        GFRK  NA+ +++ L+ NC++PP ESVEECI 
Sbjct: 330  DTKIANILTGSIYYADTKFEDADLKCKGGFRKGRNALDYVQMLLNNCKYPPAESVEECIS 389

Query: 800  NYLFPNLRSPGQKAYFLAYMVKCLLEAFRGRRKVDNRDDLRNKRVELAGELLERELMVHI 621
            N LFPNL    QKA FL YMVKCLLEA+ GRRKVDNRDD RNKR+ELA ELLEREL VH+
Sbjct: 390  NLLFPNLTGFKQKACFLGYMVKCLLEAYTGRRKVDNRDDFRNKRLELASELLERELKVHL 449

Query: 620  KHAEKRLIKAIQRDLYRDREVQTIDHYLDASIITNGLSRAFSTGAWVHPFKRMERIAGVV 441
            KH E+R++KA+QRDLY DR +Q+I+HYLDASII+NGLSRAFSTG W HP+K+ ER++GVV
Sbjct: 450  KHVERRMVKAMQRDLYGDRSLQSIEHYLDASIISNGLSRAFSTGGWSHPYKKTERVSGVV 509

Query: 440  ATLRRTNPLQAVSDMRKTRQQVSYTGRVGDARYPHPSHWGKVCFISTPDGENCGLVKNLA 261
            A+LRRTNPLQ  +DMRKTRQQVSY G+VGDARYPH SHWGK+CF+STPDGENCGLVKNLA
Sbjct: 510  ASLRRTNPLQMTADMRKTRQQVSYIGKVGDARYPHCSHWGKICFLSTPDGENCGLVKNLA 569

Query: 260  GLGLVSINILEQETLLQKFHECGMEKLVDDISCLHDGKHKIFLDGDWVGVCKDSSAFVAK 81
             LGLVS  +L  E L+++  +CG+++LVD  S L  G+HKIFLDGDW+G CKDS+ FVA+
Sbjct: 570  SLGLVSTKVL--EPLIERLLDCGLKQLVDHTSSLVHGEHKIFLDGDWIGTCKDSAFFVAE 627

Query: 80   LXXXXXRKEVPHQIEIKRDKHHGEVR 3
            L      KE+P Q+EIKRD+HHGE+R
Sbjct: 628  LRSKRRNKEIPPQVEIKRDEHHGEIR 653


>ref|XP_006364477.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
            [Solanum tuberosum]
          Length = 1219

 Score =  665 bits (1716), Expect = 0.0
 Identities = 327/498 (65%), Positives = 397/498 (79%), Gaps = 2/498 (0%)
 Frame = -1

Query: 1490 AHLQNMTYSSRIKVETHLQVYTEGLSRSDKFKTGVDKFVEKTILNEYQTDVNFGRLPVMV 1311
            A LQNMTYS+RI VETH+QV+T+ L RSDKFKTGV++FV+K  + E + DV  GR+PVMV
Sbjct: 162  ARLQNMTYSARIIVETHVQVFTKKLVRSDKFKTGVEQFVDKECVMEDKRDVFIGRIPVMV 221

Query: 1310 KSDLCWMSKREERDCEFDQGGYFLIKGAEKTFIAQEQICYRRLWVSKDPTWTIAYRPVPK 1131
             S+LCWMS  +  DC+FD GGYF++KGAEK FIAQEQIC +RLWVS   TW +AYR   K
Sbjct: 222  NSELCWMSGADRPDCDFDHGGYFIVKGAEKIFIAQEQICLKRLWVSNHSTWMVAYRSGEK 281

Query: 1130 RKRVYIKLVP--KVEHLIAGQKILTVYFYVVELPIWLLFFALGVPNDREVVKLIGLDTEE 957
            R RVY+KL    K EH+    K L+VYF + E+PIW+LFFALGV +DRE+V LI +D + 
Sbjct: 282  RNRVYLKLTETLKHEHIKGEAKALSVYF-LAEMPIWVLFFALGVSSDREIVDLIDVDIK- 339

Query: 956  DPDIVNILVASIYDADKKFEGFRKEGNAIKHIKELMQNCRFPPTESVEECIRNYLFPNLR 777
            D +I+NILVASI+DADK  E FRK   A+ ++  L+++C+FPP ESVEECI+ YLFPNL 
Sbjct: 340  DTNIINILVASIHDADKNCEDFRKGKKALAYVDRLIKSCKFPPQESVEECIKEYLFPNLS 399

Query: 776  SPGQKAYFLAYMVKCLLEAFRGRRKVDNRDDLRNKRVELAGELLERELMVHIKHAEKRLI 597
               QKA FL YMVKCLL ++ GRRKVDNRDD RNKR++LAGELLEREL  HIKHAE+R++
Sbjct: 400  GLKQKARFLGYMVKCLLLSYIGRRKVDNRDDFRNKRLDLAGELLERELRAHIKHAERRMV 459

Query: 596  KAIQRDLYRDREVQTIDHYLDASIITNGLSRAFSTGAWVHPFKRMERIAGVVATLRRTNP 417
            KA+QRDL  DR+VQ ++HYLDASIITNGLSRAFSTG W HP+KRMER++GVVATLRRTNP
Sbjct: 460  KALQRDLCGDRQVQPLEHYLDASIITNGLSRAFSTGHWCHPYKRMERVSGVVATLRRTNP 519

Query: 416  LQAVSDMRKTRQQVSYTGRVGDARYPHPSHWGKVCFISTPDGENCGLVKNLAGLGLVSIN 237
            LQ  +D+RKTRQQV+YTG+VGDARYPHPSHWGKVCF+STPDGENCGLVKNLA +GLVS  
Sbjct: 520  LQMTADLRKTRQQVTYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLASMGLVSTT 579

Query: 236  ILEQETLLQKFHECGMEKLVDDISCLHDGKHKIFLDGDWVGVCKDSSAFVAKLXXXXXRK 57
            +L  + LL+    CGM+KLVDD +    GK K+ LDGDWVGVC+DS+ FV+KL     R 
Sbjct: 580  VL--KPLLETLFRCGMQKLVDDSATSLHGKQKVLLDGDWVGVCEDSALFVSKLRRKRRRN 637

Query: 56   EVPHQIEIKRDKHHGEVR 3
            EVPHQ+E+KRD+   EVR
Sbjct: 638  EVPHQVEVKRDEQQDEVR 655


>ref|XP_010325603.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
            isoform X1 [Solanum lycopersicum]
          Length = 1225

 Score =  659 bits (1699), Expect = 0.0
 Identities = 328/498 (65%), Positives = 397/498 (79%), Gaps = 2/498 (0%)
 Frame = -1

Query: 1490 AHLQNMTYSSRIKVETHLQVYTEGLSRSDKFKTGVDKFVEKTILNEYQTDVNFGRLPVMV 1311
            A LQNMTYS+RI VETH+QV+T+ L RSDKFKTGV++FV+K  + E + DV  GR+PVMV
Sbjct: 168  ARLQNMTYSARIIVETHVQVFTKKLVRSDKFKTGVEQFVDKECVMEDKRDVFIGRIPVMV 227

Query: 1310 KSDLCWMSKREERDCEFDQGGYFLIKGAEKTFIAQEQICYRRLWVSKDPTWTIAYRPVPK 1131
             S+LCWMS  +  DCEFD GGYF++KGAEK FIAQEQ+C +RLWVS   TW +AYR   K
Sbjct: 228  NSELCWMSGADRLDCEFDHGGYFIVKGAEKIFIAQEQMCLKRLWVSNHYTWMVAYRSGEK 287

Query: 1130 RKRVYIKLVPKVEH-LIAGQ-KILTVYFYVVELPIWLLFFALGVPNDREVVKLIGLDTEE 957
            R RVY+KL   ++H  I G+ K L+VYF + E+PIW+LFFALGV +DREVV LI +D + 
Sbjct: 288  RNRVYLKLTETLKHEQIKGEAKSLSVYF-LAEMPIWVLFFALGVSSDREVVDLIDVDIK- 345

Query: 956  DPDIVNILVASIYDADKKFEGFRKEGNAIKHIKELMQNCRFPPTESVEECIRNYLFPNLR 777
            D  I+NILVASI+DADK  E FRK   A+ ++  L+++C+FPP ESVEECI+ YLFPNL 
Sbjct: 346  DNKIINILVASIHDADKNCEDFRKGKRALAYVDRLIKSCKFPPQESVEECIKEYLFPNLS 405

Query: 776  SPGQKAYFLAYMVKCLLEAFRGRRKVDNRDDLRNKRVELAGELLERELMVHIKHAEKRLI 597
               QKA FL YMVKCLL ++ GRRKVDNRDD RNKR++LAGELLEREL VHIKHAE+R++
Sbjct: 406  GLKQKARFLGYMVKCLLLSYIGRRKVDNRDDFRNKRLDLAGELLERELRVHIKHAERRMV 465

Query: 596  KAIQRDLYRDREVQTIDHYLDASIITNGLSRAFSTGAWVHPFKRMERIAGVVATLRRTNP 417
            KA+QRDL  DR+V  I+HYLDASIITNGLSRAFSTG W HP+KRMER++GVVATLRRTNP
Sbjct: 466  KALQRDLCGDRQVHPIEHYLDASIITNGLSRAFSTGHWCHPYKRMERVSGVVATLRRTNP 525

Query: 416  LQAVSDMRKTRQQVSYTGRVGDARYPHPSHWGKVCFISTPDGENCGLVKNLAGLGLVSIN 237
            LQ  +D+RKTRQQV+YTG+VGDARYP+PSHWGKVCF+STPDGENCGLVKNLA +GLVS  
Sbjct: 526  LQMTADLRKTRQQVTYTGKVGDARYPNPSHWGKVCFLSTPDGENCGLVKNLASMGLVSTT 585

Query: 236  ILEQETLLQKFHECGMEKLVDDISCLHDGKHKIFLDGDWVGVCKDSSAFVAKLXXXXXRK 57
            +L    LL+    CGM+KLVDD +    GK K+ LDGDWVGVC+DS+ FV+KL     R 
Sbjct: 586  VL--MPLLETLFRCGMQKLVDDCATSLHGKQKVLLDGDWVGVCEDSALFVSKLRRKRRRN 643

Query: 56   EVPHQIEIKRDKHHGEVR 3
            EVPHQ+E+KRD+   EVR
Sbjct: 644  EVPHQVEVKRDEQQDEVR 661


>ref|XP_004245914.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
            isoform X2 [Solanum lycopersicum]
          Length = 1219

 Score =  659 bits (1699), Expect = 0.0
 Identities = 328/498 (65%), Positives = 397/498 (79%), Gaps = 2/498 (0%)
 Frame = -1

Query: 1490 AHLQNMTYSSRIKVETHLQVYTEGLSRSDKFKTGVDKFVEKTILNEYQTDVNFGRLPVMV 1311
            A LQNMTYS+RI VETH+QV+T+ L RSDKFKTGV++FV+K  + E + DV  GR+PVMV
Sbjct: 162  ARLQNMTYSARIIVETHVQVFTKKLVRSDKFKTGVEQFVDKECVMEDKRDVFIGRIPVMV 221

Query: 1310 KSDLCWMSKREERDCEFDQGGYFLIKGAEKTFIAQEQICYRRLWVSKDPTWTIAYRPVPK 1131
             S+LCWMS  +  DCEFD GGYF++KGAEK FIAQEQ+C +RLWVS   TW +AYR   K
Sbjct: 222  NSELCWMSGADRLDCEFDHGGYFIVKGAEKIFIAQEQMCLKRLWVSNHYTWMVAYRSGEK 281

Query: 1130 RKRVYIKLVPKVEH-LIAGQ-KILTVYFYVVELPIWLLFFALGVPNDREVVKLIGLDTEE 957
            R RVY+KL   ++H  I G+ K L+VYF + E+PIW+LFFALGV +DREVV LI +D + 
Sbjct: 282  RNRVYLKLTETLKHEQIKGEAKSLSVYF-LAEMPIWVLFFALGVSSDREVVDLIDVDIK- 339

Query: 956  DPDIVNILVASIYDADKKFEGFRKEGNAIKHIKELMQNCRFPPTESVEECIRNYLFPNLR 777
            D  I+NILVASI+DADK  E FRK   A+ ++  L+++C+FPP ESVEECI+ YLFPNL 
Sbjct: 340  DNKIINILVASIHDADKNCEDFRKGKRALAYVDRLIKSCKFPPQESVEECIKEYLFPNLS 399

Query: 776  SPGQKAYFLAYMVKCLLEAFRGRRKVDNRDDLRNKRVELAGELLERELMVHIKHAEKRLI 597
               QKA FL YMVKCLL ++ GRRKVDNRDD RNKR++LAGELLEREL VHIKHAE+R++
Sbjct: 400  GLKQKARFLGYMVKCLLLSYIGRRKVDNRDDFRNKRLDLAGELLERELRVHIKHAERRMV 459

Query: 596  KAIQRDLYRDREVQTIDHYLDASIITNGLSRAFSTGAWVHPFKRMERIAGVVATLRRTNP 417
            KA+QRDL  DR+V  I+HYLDASIITNGLSRAFSTG W HP+KRMER++GVVATLRRTNP
Sbjct: 460  KALQRDLCGDRQVHPIEHYLDASIITNGLSRAFSTGHWCHPYKRMERVSGVVATLRRTNP 519

Query: 416  LQAVSDMRKTRQQVSYTGRVGDARYPHPSHWGKVCFISTPDGENCGLVKNLAGLGLVSIN 237
            LQ  +D+RKTRQQV+YTG+VGDARYP+PSHWGKVCF+STPDGENCGLVKNLA +GLVS  
Sbjct: 520  LQMTADLRKTRQQVTYTGKVGDARYPNPSHWGKVCFLSTPDGENCGLVKNLASMGLVSTT 579

Query: 236  ILEQETLLQKFHECGMEKLVDDISCLHDGKHKIFLDGDWVGVCKDSSAFVAKLXXXXXRK 57
            +L    LL+    CGM+KLVDD +    GK K+ LDGDWVGVC+DS+ FV+KL     R 
Sbjct: 580  VL--MPLLETLFRCGMQKLVDDCATSLHGKQKVLLDGDWVGVCEDSALFVSKLRRKRRRN 637

Query: 56   EVPHQIEIKRDKHHGEVR 3
            EVPHQ+E+KRD+   EVR
Sbjct: 638  EVPHQVEVKRDEQQDEVR 655


>gb|KNA21785.1| hypothetical protein SOVF_039620 [Spinacia oleracea]
          Length = 1213

 Score =  647 bits (1670), Expect = 0.0
 Identities = 309/500 (61%), Positives = 399/500 (79%), Gaps = 4/500 (0%)
 Frame = -1

Query: 1490 AHLQNMTYSSRIKVETHLQVYTEGLSRSDKFKTGVDKFVEKTILNEYQTDVNFGRLPVMV 1311
            A LQNMTYS+R+KVET LQ+YT+   +SDKFKTG  +++++T+L +  T+V  GR+PVMV
Sbjct: 155  ARLQNMTYSARLKVETRLQIYTQEKVKSDKFKTGKSEYIDRTVLKDETTEVIVGRVPVMV 214

Query: 1310 KSDLCWMSKREERDCEFDQGGYFLIKGAEKTFIAQEQICYRRLWVSKDPTWTIAYRPVPK 1131
             SD+CWMSK E+ DCEFD GGYF++KGAEKTFIAQEQIC +RLW+S +P W +AYR   K
Sbjct: 215  NSDICWMSKVEKGDCEFDHGGYFIVKGAEKTFIAQEQICLKRLWISNEPYWKVAYRSEFK 274

Query: 1130 RKRVYIKLV--PKVEHLIAGQKILTVYFYVVELPIWLLFFALGVPNDREVVKLIGLDTEE 957
            R+RV++KLV  PK E++  G+K+++VYF ++E+PIW+LFFALGV +D+EVV+LI   T+ 
Sbjct: 275  RRRVHVKLVENPKAENIQGGEKVISVYFSIIEVPIWILFFALGVSSDKEVVELIDCSTD- 333

Query: 956  DPDIVNILVASIYDADKKFEGFRKEGNAIKHIKELMQNCRFPPTESVEECIRNYLFPNLR 777
            D  I NIL ASI+DAD+K +GFR+   A+++I ++++  +FPP E+  E +  YLFP+L 
Sbjct: 334  DGRISNILFASIHDADEKCDGFRRGAKAMEYIDQMIRESKFPPDETTAEYLGKYLFPSLS 393

Query: 776  SPGQKAYFLAYMVKCLLEAFRGRRKVDNRDDLRNKRVELAGELLERELMVHIKHAEKRLI 597
               QKA FLAYMVKCLL+AF GRRK DNRDD RNKR+E A ELLEREL VH++HAEKR++
Sbjct: 394  GNKQKARFLAYMVKCLLQAFSGRRKCDNRDDFRNKRLECASELLERELRVHMRHAEKRMV 453

Query: 596  KAIQRDLYRDREVQTIDHYLDASIITNGLSRAFSTGAWVHPFKRMERIAGVVATLRRTNP 417
            KA+QRDLY +R++Q+I+HYLDASI+TNGL+R+FSTGAW HPFKR ER++GVVA LRRTNP
Sbjct: 454  KAMQRDLYGERDLQSIEHYLDASIVTNGLTRSFSTGAWAHPFKRAERVSGVVANLRRTNP 513

Query: 416  LQAVSDMRKTRQQVSYTGRVGDARYPHPSHWGKVCFISTPDGENCGLVKNLAGLGLVSIN 237
            LQ + DMRKTRQQVSYTG+VGDARYPHPSHWGK+CF+STPDGENCGLVKN+A  GLVS +
Sbjct: 514  LQTICDMRKTRQQVSYTGKVGDARYPHPSHWGKICFLSTPDGENCGLVKNIAATGLVSSS 573

Query: 236  ILEQE--TLLQKFHECGMEKLVDDISCLHDGKHKIFLDGDWVGVCKDSSAFVAKLXXXXX 63
            I ++E  +LL+    CGM++LV D S    GK K+ +DG+WVGVC DS   V +L     
Sbjct: 574  ISKEERVSLLETLLRCGMDRLVHDSSTSLSGKDKVLVDGEWVGVCSDSLKVVEELRRKRR 633

Query: 62   RKEVPHQIEIKRDKHHGEVR 3
            RK +P Q+EIKRD  + EVR
Sbjct: 634  RKRLPCQVEIKRDVQNAEVR 653


>gb|ABG29321.1| DNA-directed RNA polymerase, putative [Solanum bulbocastanum]
          Length = 1018

 Score =  647 bits (1670), Expect = 0.0
 Identities = 329/525 (62%), Positives = 396/525 (75%), Gaps = 29/525 (5%)
 Frame = -1

Query: 1490 AHLQNMTYSSRIKVETHLQVYTEGLSRSDKFKTGVDKFVEKTILNEYQTDVNFGRLPVMV 1311
            A LQNMTYS+RI VETH  V+T+ L RSDKFKTGV++FV+K  + E + DV  GR+PVMV
Sbjct: 166  ARLQNMTYSARIIVETH--VFTKKLVRSDKFKTGVEQFVDKECVMEDKRDVFIGRIPVMV 223

Query: 1310 KSDLCWMSKREERDCEFDQGGYFLIKGAEKTFIAQEQICYRRLWVSKDPTWTIAYRPVPK 1131
             S+LCWMS  +  DCEFD GGYF++KGAEK FIAQEQIC +RLWVS   TW +AYR   K
Sbjct: 224  NSELCWMSGADRPDCEFDHGGYFIVKGAEKIFIAQEQICLKRLWVSNHSTWMVAYRSGEK 283

Query: 1130 RKRVYIKLVP--KVEHLIAGQKILTVYFYVVELPIWLLFFALGVPNDREVVKLIGLDTEE 957
            R RVY+KL    K EH+    K L+VYF+  E+PIW+LFFALGV +DREVV LI +D + 
Sbjct: 284  RNRVYLKLTETLKHEHIKGEAKALSVYFFA-EMPIWVLFFALGVSSDREVVDLIDVDIK- 341

Query: 956  DPDIVNILVASIYDADKKFEGFRKEGNAIKHIKELMQNCRFPPTESVEECIRNYLFPNLR 777
            D +I+NILVASI+DADK  E FRK   A+ ++  L+++C+FPP ESVEECI+ YLFPNL 
Sbjct: 342  DTNIINILVASIHDADKNCEDFRKGKKALAYVDRLVKSCKFPPQESVEECIKEYLFPNLS 401

Query: 776  SPGQKAYFLAYMVKCLLEAFRGRRKVDNRDDLRNKRVELAGELLERELMVHIKHAEKRLI 597
               QKA FL YMVKCLL ++ GRRKVDNRDD RNKR++LAGELLEREL VH+KHAE+R++
Sbjct: 402  GLKQKARFLGYMVKCLLLSYIGRRKVDNRDDFRNKRLDLAGELLERELRVHVKHAERRMV 461

Query: 596  KAIQRDLYRDREVQTIDHYLDASIITNGLSRAFSTGAWVHPFKRMERIAGVVATLRRTNP 417
            KA+QRDL  DR+VQ I+HYLDASIITNGLSRAFSTG W HP+KRMER++GVVATLRRTNP
Sbjct: 462  KALQRDLCGDRQVQPIEHYLDASIITNGLSRAFSTGHWCHPYKRMERVSGVVATLRRTNP 521

Query: 416  LQAVSDMRKTRQQVSYTGRVGDARYPHPSHWGKVCFISTPDGENCGLVKNLAGLGLVSIN 237
            LQ  +D+RKTRQQV+YTG+VGDARYPHPSHWGKVCF+STPDGENCGLVKNLA +GLVS  
Sbjct: 522  LQMTADLRKTRQQVTYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLASMGLVSTT 581

Query: 236  ILEQETLLQKFHECGMEKLVDDISCLHDGKHKIFLDGDWVGVCKDSSAFVAKLXXXXXRK 57
            +L  + LL+    CGM+KLVDD +    GK K+ LDGDWVGVC+DS+ FV+KL     R 
Sbjct: 582  VL--KPLLETLFRCGMQKLVDDSATSLHGKQKVLLDGDWVGVCEDSALFVSKLRRQRRRN 639

Query: 56   EVPH---------------------------QIEIKRDKHHGEVR 3
            EVPH                           Q+E+KRD+   EVR
Sbjct: 640  EVPHQLAHTLAIPPGICYLLPTHVPVTLTEAQVEVKRDEQQDEVR 684


>gb|AAY68198.1| RNA polymerase IV second largest subunit [Rhododendron macrophyllum]
          Length = 1019

 Score =  647 bits (1668), Expect = 0.0
 Identities = 317/461 (68%), Positives = 375/461 (81%), Gaps = 1/461 (0%)
 Frame = -1

Query: 1382 KFVEKTILNEYQTDVNFGRLPVMVKSDLCWMSKREERDCEFDQGGYFLIKGAEKTFIAQE 1203
            ++V+K  ++E   DV  GR+PVM+KSDLCWM+  E+ DC+FD GGYFLIKGAEKTFIAQE
Sbjct: 1    QYVDKDPISEDNRDVIIGRIPVMLKSDLCWMNGVEKSDCDFDHGGYFLIKGAEKTFIAQE 60

Query: 1202 QICYRRLWVSKDPTWTIAYRPVPKRKRVYIKLVP-KVEHLIAGQKILTVYFYVVELPIWL 1026
            QIC +RLWVS  P+WT+AYR V KRKRVYIKL P K EH+  G+K+L+VYF  VE PIW+
Sbjct: 61   QICLKRLWVSNSPSWTVAYRDVSKRKRVYIKLEPPKREHIRGGEKVLSVYFSAVEFPIWI 120

Query: 1025 LFFALGVPNDREVVKLIGLDTEEDPDIVNILVASIYDADKKFEGFRKEGNAIKHIKELMQ 846
            LFFALG  +D+EVV LI  D E D  IVN+L+ASIYDAD+  +GFR+  NAI  I + ++
Sbjct: 121  LFFALGASSDKEVVNLIDCDGE-DSRIVNVLIASIYDADENCKGFRRGRNAINDIMKKIE 179

Query: 845  NCRFPPTESVEECIRNYLFPNLRSPGQKAYFLAYMVKCLLEAFRGRRKVDNRDDLRNKRV 666
            NC+FPP ES+E  + NYLFPNL    QKA FL YMVKCLL+A+ GRRK+DNRDD RNKR+
Sbjct: 180  NCKFPPQESIEAFLSNYLFPNLSGFRQKARFLGYMVKCLLQAYTGRRKIDNRDDFRNKRL 239

Query: 665  ELAGELLERELMVHIKHAEKRLIKAIQRDLYRDREVQTIDHYLDASIITNGLSRAFSTGA 486
            ELAGELLEREL VH+KHAE+R++KA+QRDLY +R +  I+HYLDASIITNGLSRAFSTGA
Sbjct: 240  ELAGELLERELRVHVKHAERRMVKAMQRDLYGERVIHAIEHYLDASIITNGLSRAFSTGA 299

Query: 485  WVHPFKRMERIAGVVATLRRTNPLQAVSDMRKTRQQVSYTGRVGDARYPHPSHWGKVCFI 306
            W HP+K+MERI+GVVATLRRTNPLQ ++DMRKTRQQVSYTG+VGDARYPHPSHWGK+CF+
Sbjct: 300  WSHPYKKMERISGVVATLRRTNPLQTIADMRKTRQQVSYTGKVGDARYPHPSHWGKICFL 359

Query: 305  STPDGENCGLVKNLAGLGLVSINILEQETLLQKFHECGMEKLVDDISCLHDGKHKIFLDG 126
            STPDGENCGLVKNLA  GLVS NI  +E  L K  + GMEKLVDD S L  GK K+FLDG
Sbjct: 360  STPDGENCGLVKNLAITGLVSTNI--EEHFLDKLLDSGMEKLVDDTSTLLSGKVKVFLDG 417

Query: 125  DWVGVCKDSSAFVAKLXXXXXRKEVPHQIEIKRDKHHGEVR 3
            +WVGVC DS +FVA L     RKEVPHQ+EIKRD+ H EVR
Sbjct: 418  NWVGVCGDSVSFVAALRRKRRRKEVPHQVEIKRDEQHREVR 458


>ref|XP_010046894.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
            [Eucalyptus grandis] gi|629113927|gb|KCW78602.1|
            hypothetical protein EUGRSUZ_C00069 [Eucalyptus grandis]
          Length = 1188

 Score =  645 bits (1665), Expect = 0.0
 Identities = 323/500 (64%), Positives = 396/500 (79%), Gaps = 4/500 (0%)
 Frame = -1

Query: 1490 AHLQNMTYSSRIKVETHLQVYTEGLSRSDKFKTGVDKFVEKTILNEYQTDVNFGRLPVMV 1311
            A LQNMTYSSR+KV  +LQVYT+ L RSDKFKTG ++FVEK + ++   DV  GR+P+MV
Sbjct: 134  ARLQNMTYSSRMKVNINLQVYTQKLVRSDKFKTGKEQFVEKEVTSDQSKDVVVGRIPIMV 193

Query: 1310 KSDLCWMSKREERDCEFDQGGYFLIKGAEKTFIAQEQICYRRLWVSKDPTWTIAYRPVPK 1131
            KS LCWMS+ E+ DC+FD GGYFL+KGAEKTFIAQEQI  ++LW+S +  WTIAYR   K
Sbjct: 194  KSKLCWMSETEKGDCDFDLGGYFLVKGAEKTFIAQEQISLKKLWISDNQGWTIAYRSTWK 253

Query: 1130 RKRVYIKLVPK--VEHLIAGQKILTVYFYVVELPIWLLFFALGVPNDREVVKLIGLDTEE 957
            RKR+YIKL     V+++   +K+LTVYF   E+ IW+LFFALGV +D+EVV+LI     +
Sbjct: 254  RKRLYIKLAGNSDVDYVRGEEKVLTVYFLSTEISIWILFFALGVSSDKEVVELIDFG-HD 312

Query: 956  DPDIVNILVASIYDADKKFEGFRKEGNAIKHIKELMQNCRFPPTESVEECIRNYLFPNLR 777
            D  +VNIL ASI++AD+K++GFRK G A+  +++ ++NC+FPP ES+EEC  NYLFP+L 
Sbjct: 313  DSRVVNILFASIHEADEKYKGFRKGGKALSEVEKSIKNCKFPPAESIEECFDNYLFPSLT 372

Query: 776  SPGQKAYFLAYMVKCLLEAFRGRRKVDNRDDLRNKRVELAGELLERELMVHIKHAEKRLI 597
               +KA +LAYMVKCLL+A+ GRRK DN+DD RNKR++LAGELLEREL V I +A +R++
Sbjct: 373  GRKRKARYLAYMVKCLLQAYTGRRKCDNKDDFRNKRLDLAGELLERELRVQILNARRRMM 432

Query: 596  KAIQRDLYRDREVQTIDHYLDASIITNGLSRAFSTGAWVHPFKRMERIAGVVATLRRTNP 417
            +AIQRDLY DR +Q I+HYLDASIITNGLSRAFSTGAW HPFK  ERI+GVVATLRRTNP
Sbjct: 433  RAIQRDLYPDRSIQDIEHYLDASIITNGLSRAFSTGAWSHPFK-AERISGVVATLRRTNP 491

Query: 416  LQAVSDMRKTRQQVSYTGRVGDARYPHPSHWGKVCFISTPDGENCGLVKNLAGLGLVSIN 237
            LQAVSDMRK RQ V+YTG+VGDARYPHPSHWGKVCF+STPDGENCGLVKNLA  GLVS N
Sbjct: 492  LQAVSDMRKMRQHVNYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLAATGLVSTN 551

Query: 236  ILE--QETLLQKFHECGMEKLVDDISCLHDGKHKIFLDGDWVGVCKDSSAFVAKLXXXXX 63
             LE   + LL    +CGMEK+ DD S    GK KIFL+GDWVG+C++S +FV  L     
Sbjct: 552  SLEPLDDILL----DCGMEKVADDSSTSLHGKIKIFLNGDWVGICENSLSFVNNLRNNRR 607

Query: 62   RKEVPHQIEIKRDKHHGEVR 3
            RKE+P Q+EIKRD H GEVR
Sbjct: 608  RKELPSQVEIKRDIHQGEVR 627