BLASTX nr result
ID: Perilla23_contig00009261
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Perilla23_contig00009261
(514 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011091341.1| PREDICTED: 29 kDa ribonucleoprotein A, chlor... 202 6e-50
emb|CDO99317.1| unnamed protein product [Coffea canephora] 165 1e-38
ref|XP_012828978.1| PREDICTED: 28 kDa ribonucleoprotein, chlorop... 157 2e-36
ref|XP_010650156.1| PREDICTED: 28 kDa ribonucleoprotein, chlorop... 156 7e-36
ref|XP_006340961.1| PREDICTED: 33 kDa ribonucleoprotein, chlorop... 148 1e-33
ref|XP_009590591.1| PREDICTED: 28 kDa ribonucleoprotein, chlorop... 148 2e-33
ref|XP_004247794.1| PREDICTED: 28 kDa ribonucleoprotein, chlorop... 144 3e-32
ref|XP_009784540.1| PREDICTED: 33 kDa ribonucleoprotein, chlorop... 143 6e-32
ref|XP_007035265.1| RNA-binding family protein [Theobroma cacao]... 141 2e-31
ref|XP_012482030.1| PREDICTED: RNA-binding protein CP31B, chloro... 141 2e-31
gb|EPS60926.1| hypothetical protein M569_13875, partial [Genlise... 138 1e-30
gb|KHG08630.1| 28 kDa ribonucleoprotein, chloroplastic [Gossypiu... 138 2e-30
ref|XP_002311696.1| RNA-binding protein RNP1 precursor [Populus ... 138 2e-30
ref|XP_011029743.1| PREDICTED: 29 kDa ribonucleoprotein, chlorop... 137 2e-30
ref|XP_002528350.1| ribonucleoprotein, chloroplast, putative [Ri... 134 2e-29
ref|XP_010667102.1| PREDICTED: 28 kDa ribonucleoprotein, chlorop... 134 3e-29
ref|XP_002314506.1| RNA-binding protein RNP1 precursor [Populus ... 134 3e-29
ref|XP_006838974.1| PREDICTED: 28 kDa ribonucleoprotein, chlorop... 134 3e-29
emb|CAN83111.1| hypothetical protein VITISV_026573 [Vitis vinifera] 134 3e-29
ref|XP_010940713.1| PREDICTED: 28 kDa ribonucleoprotein, chlorop... 133 5e-29
>ref|XP_011091341.1| PREDICTED: 29 kDa ribonucleoprotein A, chloroplastic [Sesamum
indicum]
Length = 283
Score = 202 bits (515), Expect = 6e-50
Identities = 108/172 (62%), Positives = 118/172 (68%), Gaps = 1/172 (0%)
Frame = -2
Query: 513 SMHSLKCISSKNWPNDHLLIKISCPKTLQPALVSHSLGIELNP-TNGVCTKWRAPRIXXX 337
S+ S KC+SSKNWP+DHLL KISCP+TLQ A VSHSL E NP T+ C WR R+
Sbjct: 14 SIKSFKCVSSKNWPSDHLL-KISCPRTLQSAPVSHSLVFEFNPITSSACKSWRLSRVSAA 72
Query: 336 XXXXXXXXXXXXXXXXXXXXXXXXXVLASDGVAAAENSGANTKLYFGNLPYLCDSAQLAG 157
+ G AA E+ NTKLYFGNLPYLCDSAQLAG
Sbjct: 73 VAQEEAAALTAPVEEPPEAEEEVTSGV---GGAATESGEVNTKLYFGNLPYLCDSAQLAG 129
Query: 156 IIQEYASPELVEVLYDRNTGKSRGFAFVTMSSVEECNIIIQNLDGSEYGGRT 1
IIQEYASPELVEVLYDRNTGKSRGFAFVTMSS+EEC +IQNLDGSEYGGRT
Sbjct: 130 IIQEYASPELVEVLYDRNTGKSRGFAFVTMSSIEECKTVIQNLDGSEYGGRT 181
>emb|CDO99317.1| unnamed protein product [Coffea canephora]
Length = 293
Score = 165 bits (417), Expect = 1e-38
Identities = 95/177 (53%), Positives = 108/177 (61%), Gaps = 6/177 (3%)
Frame = -2
Query: 513 SMHSLKCISSKNWPNDHLLIKISCPKTLQPALVSHSLGIELNPTNG-VCTKWRAPRIXXX 337
SM SL CI KNWP D L K+ + LQ A +SHSLGIE + G + KWRA RI
Sbjct: 16 SMQSLNCIRFKNWPCDPAL-KVVSSRMLQVASISHSLGIESSILIGPLSNKWRASRIAAA 74
Query: 336 XXXXXXXXXXXXXXXXXXXXXXXXXVL-----ASDGVAAAENSGANTKLYFGNLPYLCDS 172
S A++S NTKLYFGNLPY DS
Sbjct: 75 VAQEEAAVLAPEEATASEQVEEVIQEEKEVEEVSSEAEVAQSSSVNTKLYFGNLPYNVDS 134
Query: 171 AQLAGIIQEYASPELVEVLYDRNTGKSRGFAFVTMSSVEECNIIIQNLDGSEYGGRT 1
AQLAGIIQ+YASPEL+EVLYDR TGKSRGFAFVTMS+VE+CN++IQNLDG EYGGRT
Sbjct: 135 AQLAGIIQDYASPELIEVLYDRETGKSRGFAFVTMSTVEDCNVVIQNLDGREYGGRT 191
>ref|XP_012828978.1| PREDICTED: 28 kDa ribonucleoprotein, chloroplastic [Erythranthe
guttatus] gi|604345160|gb|EYU43771.1| hypothetical
protein MIMGU_mgv1a011502mg [Erythranthe guttata]
Length = 279
Score = 157 bits (398), Expect = 2e-36
Identities = 92/183 (50%), Positives = 108/183 (59%), Gaps = 12/183 (6%)
Frame = -2
Query: 513 SMHSLKCISSKNWPNDHL----------LIKISCPKTLQPALVSHSLGIELNP--TNGVC 370
SM SLK ++K WPN++ +KISC + +NP ++GVC
Sbjct: 17 SMQSLKYTTTKIWPNNNNNNNNNDNNNNFLKISCGR--------------INPISSSGVC 62
Query: 369 TKWRAPRIXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLASDGVAAAENSGANTKLYFGNL 190
KWR RI A G + + + ANTKLYFGNL
Sbjct: 63 VKWRVLRIAAAVAQEEAAALTAPAEEESEA--------AEVGDSESAAAAANTKLYFGNL 114
Query: 189 PYLCDSAQLAGIIQEYASPELVEVLYDRNTGKSRGFAFVTMSSVEECNIIIQNLDGSEYG 10
PYLCDSAQLAGI+QEYASPELVEVLYDRNTGKSRGFAFVTMS++EECN +IQNLDG EYG
Sbjct: 115 PYLCDSAQLAGIVQEYASPELVEVLYDRNTGKSRGFAFVTMSTIEECNTVIQNLDGREYG 174
Query: 9 GRT 1
GRT
Sbjct: 175 GRT 177
>ref|XP_010650156.1| PREDICTED: 28 kDa ribonucleoprotein, chloroplastic [Vitis vinifera]
gi|296083731|emb|CBI23720.3| unnamed protein product
[Vitis vinifera]
Length = 283
Score = 156 bits (394), Expect = 7e-36
Identities = 91/171 (53%), Positives = 107/171 (62%)
Frame = -2
Query: 513 SMHSLKCISSKNWPNDHLLIKISCPKTLQPALVSHSLGIELNPTNGVCTKWRAPRIXXXX 334
+MH+LK SK+ P+D LL IS P P+ +SHS I+ + + KWRAPRI
Sbjct: 16 TMHTLKLSRSKHCPSDALLRIISTPIFKVPS-ISHSHVIDPPLSLPISHKWRAPRISAAV 74
Query: 333 XXXXXXXXXXXXXXXXXXXXXXXXVLASDGVAAAENSGANTKLYFGNLPYLCDSAQLAGI 154
VL +G S NTKLYFGNLPY CDSAQLAGI
Sbjct: 75 AQEEAAATAPVEEEQQQGQEEGEQVLREEGA----ESPVNTKLYFGNLPYSCDSAQLAGI 130
Query: 153 IQEYASPELVEVLYDRNTGKSRGFAFVTMSSVEECNIIIQNLDGSEYGGRT 1
IQ Y SPELVEVLY+R+TG+SRGFAFVTMSSVE+CN +I+NLDGSEYGGRT
Sbjct: 131 IQNYGSPELVEVLYNRDTGRSRGFAFVTMSSVEDCNAVIENLDGSEYGGRT 181
>ref|XP_006340961.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like, partial
[Solanum tuberosum]
Length = 278
Score = 148 bits (374), Expect = 1e-33
Identities = 85/175 (48%), Positives = 104/175 (59%), Gaps = 4/175 (2%)
Frame = -2
Query: 513 SMHSLKCI-SSKNWPNDHLLIKISCPKTLQPALVSHSLGIELNPTNGVCTKWRA-PRIXX 340
S SL CI S+ NW N L+KIS +T L+S S + + KWR PR+
Sbjct: 6 SFSSLHCIRSTLNWTNSDHLLKISSTRTPNLTLISSSS----SEVTSIYKKWRVLPRLAA 61
Query: 339 XXXXXXXXXXXXXXXXXXXXXXXXXXV--LASDGVAAAENSGANTKLYFGNLPYLCDSAQ 166
+ ++E+ G NTKLYFGNLPYLCDSAQ
Sbjct: 62 AVVQEEVEAAVTEEEEEVPVPAVDEEEEKVGEGFDGSSESEGVNTKLYFGNLPYLCDSAQ 121
Query: 165 LAGIIQEYASPELVEVLYDRNTGKSRGFAFVTMSSVEECNIIIQNLDGSEYGGRT 1
LAGI+Q+YASPELVEVLYDR+TGKSRGFAFVTMSS+E+C +++NLDG EYGGRT
Sbjct: 122 LAGIVQDYASPELVEVLYDRDTGKSRGFAFVTMSSLEDCKTVVENLDGREYGGRT 176
Score = 57.8 bits (138), Expect = 3e-06
Identities = 30/69 (43%), Positives = 39/69 (56%)
Frame = -2
Query: 210 KLYFGNLPYLCDSAQLAGIIQEYASPELVEVLYDRNTGKSRGFAFVTMSSVEECNIIIQN 31
KL+ GNL + S LA QEY + VLYD TG+SRG+ FV+ + EE + N
Sbjct: 198 KLFVGNLAWSVSSESLAQAFQEYGAVVGARVLYDGETGRSRGYGFVSFETREEMENALNN 257
Query: 30 LDGSEYGGR 4
L+G E GR
Sbjct: 258 LNGVELDGR 266
>ref|XP_009590591.1| PREDICTED: 28 kDa ribonucleoprotein, chloroplastic [Nicotiana
tomentosiformis]
Length = 297
Score = 148 bits (373), Expect = 2e-33
Identities = 90/184 (48%), Positives = 107/184 (58%), Gaps = 16/184 (8%)
Frame = -2
Query: 504 SLKCISSKNWPN---DHLLIKISCPKTLQPALVS-------HSLGIELNPTNGVCTKWR- 358
+L I SK WPN DHLL K+ +T AL+S H G E+ V KWR
Sbjct: 16 TLHSIRSKTWPNYNSDHLL-KVPSTRTPNIALISSAATASVHLFGSEV---TSVAKKWRV 71
Query: 357 APRIXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLASDG-----VAAAENSGANTKLYFGN 193
PR+ V+ G +++E G NTKLYFGN
Sbjct: 72 VPRLAAAVAQEEAEAVTVEEEEAEAVAVEEEVVVEEKGGEGSEESSSEGEGVNTKLYFGN 131
Query: 192 LPYLCDSAQLAGIIQEYASPELVEVLYDRNTGKSRGFAFVTMSSVEECNIIIQNLDGSEY 13
LPYLCDSAQLAGI+Q+YA+PELVEVLYDR TGKSRGFAFVTMSS+E+C +I+NLDG EY
Sbjct: 132 LPYLCDSAQLAGIVQDYATPELVEVLYDRETGKSRGFAFVTMSSLEDCKTVIENLDGREY 191
Query: 12 GGRT 1
GGRT
Sbjct: 192 GGRT 195
Score = 56.2 bits (134), Expect = 9e-06
Identities = 29/69 (42%), Positives = 39/69 (56%)
Frame = -2
Query: 210 KLYFGNLPYLCDSAQLAGIIQEYASPELVEVLYDRNTGKSRGFAFVTMSSVEECNIIIQN 31
KL+ GNL + S L QEY + VLYD TG+SRG+ FV+ + E+ +QN
Sbjct: 217 KLFVGNLAWSVTSESLVQAFQEYGTVVGARVLYDGETGRSRGYGFVSYENREQLENALQN 276
Query: 30 LDGSEYGGR 4
L+G E GR
Sbjct: 277 LNGVELDGR 285
>ref|XP_004247794.1| PREDICTED: 28 kDa ribonucleoprotein, chloroplastic [Solanum
lycopersicum]
Length = 281
Score = 144 bits (363), Expect = 3e-32
Identities = 84/173 (48%), Positives = 107/173 (61%), Gaps = 2/173 (1%)
Frame = -2
Query: 513 SMHSLKCISSKNWPNDHLLIKISCPKTLQPALVSHSLGIELNPTNGVCTKWRA-PRIXXX 337
S+HS++ + N N L+KIS +T L+S S+ + + KWR PR+
Sbjct: 15 SLHSIR--TKSNLTNSDHLLKISSARTPNLTLISSSV----SELTSIYKKWRVLPRLSAA 68
Query: 336 XXXXXXXXXXXXXXXXXXXXXXXXXV-LASDGVAAAENSGANTKLYFGNLPYLCDSAQLA 160
V SDG ++E+ G NTKLYFGNLPYLCDSAQLA
Sbjct: 69 VAQEEAEAAVTEEEVPAPAVDEEEKVGEGSDG--SSESEGVNTKLYFGNLPYLCDSAQLA 126
Query: 159 GIIQEYASPELVEVLYDRNTGKSRGFAFVTMSSVEECNIIIQNLDGSEYGGRT 1
GI+Q+YASPELVEVLYDR+TGKSRGFAFVTMS++E+C +++NLDG EYGGRT
Sbjct: 127 GIVQDYASPELVEVLYDRDTGKSRGFAFVTMSTLEDCKTVVENLDGREYGGRT 179
Score = 57.8 bits (138), Expect = 3e-06
Identities = 30/69 (43%), Positives = 39/69 (56%)
Frame = -2
Query: 210 KLYFGNLPYLCDSAQLAGIIQEYASPELVEVLYDRNTGKSRGFAFVTMSSVEECNIIIQN 31
KL+ GNL + S LA QEY + VLYD TG+SRG+ FV+ + EE + N
Sbjct: 201 KLFVGNLAWSVSSESLAQAFQEYGTVVGARVLYDGETGRSRGYGFVSFETREEMENALNN 260
Query: 30 LDGSEYGGR 4
L+G E GR
Sbjct: 261 LNGVELDGR 269
>ref|XP_009784540.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic [Nicotiana
sylvestris]
Length = 288
Score = 143 bits (360), Expect = 6e-32
Identities = 89/176 (50%), Positives = 102/176 (57%), Gaps = 8/176 (4%)
Frame = -2
Query: 504 SLKCISSKNWP---NDHLLIKISCPKTLQPALVSHSLGIELNPTNGVCTKWR-APRIXXX 337
+L I SK WP +DHLL KIS +T LV S V KWR PR+
Sbjct: 16 TLHSIRSKTWPNYNSDHLL-KISSTRTPNITLVFSS----SCEVTSVFKKWRVVPRLAAA 70
Query: 336 XXXXXXXXXXXXXXXXXXXXXXXXXVLASDGVAAAENS----GANTKLYFGNLPYLCDSA 169
V G + E+S G NTKLYFGNLPYLCDSA
Sbjct: 71 VAQEEAAAVTVEEEEAEAVAVEEEVVEEKGGEGSEESSSEGEGVNTKLYFGNLPYLCDSA 130
Query: 168 QLAGIIQEYASPELVEVLYDRNTGKSRGFAFVTMSSVEECNIIIQNLDGSEYGGRT 1
QLAGI+Q+YA+PELVEVLYDR TGKSRGFAFVTMSS+E+C +I+NLDG EYGGRT
Sbjct: 131 QLAGIVQDYATPELVEVLYDRETGKSRGFAFVTMSSLEDCKTVIENLDGREYGGRT 186
Score = 57.4 bits (137), Expect = 4e-06
Identities = 29/69 (42%), Positives = 40/69 (57%)
Frame = -2
Query: 210 KLYFGNLPYLCDSAQLAGIIQEYASPELVEVLYDRNTGKSRGFAFVTMSSVEECNIIIQN 31
KL+ GNL + S LA QEY + VLYD TG+SRG+ F++ + E+ +QN
Sbjct: 208 KLFVGNLAWSVTSESLAQAFQEYGTVVGARVLYDGETGRSRGYGFISYENREQLENALQN 267
Query: 30 LDGSEYGGR 4
L+G E GR
Sbjct: 268 LNGVELDGR 276
>ref|XP_007035265.1| RNA-binding family protein [Theobroma cacao]
gi|508714294|gb|EOY06191.1| RNA-binding family protein
[Theobroma cacao]
Length = 293
Score = 141 bits (356), Expect = 2e-31
Identities = 85/179 (47%), Positives = 104/179 (58%), Gaps = 8/179 (4%)
Frame = -2
Query: 513 SMHSLKCISSKNWPNDHLLIKISCPKTLQPALVSHSLGI-ELNPTNGVCTKWRAPRIXXX 337
S+ +LKC+ K DH +++ +T+ +SHS EL T+G KWR ++
Sbjct: 16 SIQTLKCMRFKQLTADHSVLRFPSSRTISS--ISHSFFTHELFLTSGTVQKWRVLKVSAA 73
Query: 336 XXXXXXXXXXXXXXXXXXXXXXXXXVLASDG-------VAAAENSGANTKLYFGNLPYLC 178
+A++G AA S NTKLYFGNLPY
Sbjct: 74 VAQQEAAATAQEEESLAEEEVKEGE-VAAEGETEAQAETAAEAESPVNTKLYFGNLPYNV 132
Query: 177 DSAQLAGIIQEYASPELVEVLYDRNTGKSRGFAFVTMSSVEECNIIIQNLDGSEYGGRT 1
DSAQLAGIIQEY SPELVEVLYDR TGKSRGFAFVTMS+VE+CN +I+NLDGSEY GRT
Sbjct: 133 DSAQLAGIIQEYGSPELVEVLYDRETGKSRGFAFVTMSTVEDCNTVIENLDGSEYLGRT 191
>ref|XP_012482030.1| PREDICTED: RNA-binding protein CP31B, chloroplastic [Gossypium
raimondii] gi|763761287|gb|KJB28541.1| hypothetical
protein B456_005G054000 [Gossypium raimondii]
Length = 294
Score = 141 bits (355), Expect = 2e-31
Identities = 90/179 (50%), Positives = 104/179 (58%), Gaps = 8/179 (4%)
Frame = -2
Query: 513 SMHSLKCISSKNWPN-DHL---LIKISCPKTLQPALVSHSLGI---ELNPTNGVCT-KWR 358
S+H+LKC+ K DH L++I + L P+L+SH EL P V KWR
Sbjct: 17 SIHTLKCLHFKQLAAADHHHTPLLRIPSARVLSPSLISHHQSYFTHELFPIAVVTVQKWR 76
Query: 357 APRIXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLASDGVAAAENSGANTKLYFGNLPYLC 178
A ++ A AA S NTKLYFGNLPY
Sbjct: 77 ALKVSAAVAQQETAVTAESPVEEEKVEEVEGEAEAE----AAVESTVNTKLYFGNLPYNV 132
Query: 177 DSAQLAGIIQEYASPELVEVLYDRNTGKSRGFAFVTMSSVEECNIIIQNLDGSEYGGRT 1
DSAQLAGIIQEY SPELVEVLY+R TGKSRGFAFVTMS++E+CNIIIQNLDGSEY GRT
Sbjct: 133 DSAQLAGIIQEYGSPELVEVLYNRETGKSRGFAFVTMSTIEDCNIIIQNLDGSEYLGRT 191
>gb|EPS60926.1| hypothetical protein M569_13875, partial [Genlisea aurea]
Length = 184
Score = 138 bits (348), Expect = 1e-30
Identities = 66/79 (83%), Positives = 73/79 (92%)
Frame = -2
Query: 240 AAAENSGANTKLYFGNLPYLCDSAQLAGIIQEYASPELVEVLYDRNTGKSRGFAFVTMSS 61
A + S A+TKLYFGNLPY CDSAQLAGIIQ+YASPEL+EVLYDRNTG+SRGFAFVTMSS
Sbjct: 3 AEEDVSDASTKLYFGNLPYNCDSAQLAGIIQDYASPELIEVLYDRNTGRSRGFAFVTMSS 62
Query: 60 VEECNIIIQNLDGSEYGGR 4
VEECN +IQNLDGSE+GGR
Sbjct: 63 VEECNTVIQNLDGSEFGGR 81
>gb|KHG08630.1| 28 kDa ribonucleoprotein, chloroplastic [Gossypium arboreum]
Length = 292
Score = 138 bits (347), Expect = 2e-30
Identities = 88/180 (48%), Positives = 102/180 (56%), Gaps = 9/180 (5%)
Frame = -2
Query: 513 SMHSLKCISSKNWPN--DHL---LIKISCPKTLQPALVSHSLGI---ELNPTNGVCT-KW 361
S+H+LKC+ K DH L++I + L P+ +SH EL PT V KW
Sbjct: 17 SIHTLKCLRFKQLAAAADHHHTPLLRIPSARVLSPSSISHHQSYFTHELFPTAVVTVQKW 76
Query: 360 RAPRIXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLASDGVAAAENSGANTKLYFGNLPYL 181
RA ++ V A S NTKLYFGNLPY
Sbjct: 77 RALKVSAAVAQQETAVTAESPVEEEKVEE------VEGEVEAEAESTVNTKLYFGNLPYN 130
Query: 180 CDSAQLAGIIQEYASPELVEVLYDRNTGKSRGFAFVTMSSVEECNIIIQNLDGSEYGGRT 1
DSAQLAGIIQEY SPELVEVLY+R TGKSRGFAFVTMS++E+CN IIQNLDGSEY GRT
Sbjct: 131 VDSAQLAGIIQEYGSPELVEVLYNRETGKSRGFAFVTMSTIEDCNTIIQNLDGSEYLGRT 190
>ref|XP_002311696.1| RNA-binding protein RNP1 precursor [Populus trichocarpa]
gi|118486835|gb|ABK95252.1| unknown [Populus
trichocarpa] gi|222851516|gb|EEE89063.1| RNA-binding
protein RNP1 precursor [Populus trichocarpa]
Length = 279
Score = 138 bits (347), Expect = 2e-30
Identities = 79/176 (44%), Positives = 103/176 (58%), Gaps = 6/176 (3%)
Frame = -2
Query: 513 SMHSLKCISSKNWPNDHLLIKISCPKTLQPALVSHSLGIELNPTNGVCTKWRAPRIXXXX 334
S+H+LKC+ K+ P DH L+K+S P + A +S S + + P + V WR PR
Sbjct: 17 SIHTLKCMHVKHCPFDHSLLKVS-PVRIMLATLSRSNYV-IEPLSQVAASWRVPRASADV 74
Query: 333 XXXXXXXXXXXXXXXXXXXXXXXXVLASDGVAAAENSG------ANTKLYFGNLPYLCDS 172
+ + +A+ E G NTKLYFGNLPY DS
Sbjct: 75 AQEEAPATAPA--------------VEEEELASGETEGEADQVPVNTKLYFGNLPYNVDS 120
Query: 171 AQLAGIIQEYASPELVEVLYDRNTGKSRGFAFVTMSSVEECNIIIQNLDGSEYGGR 4
AQLAG+IQEY +PE+VEVLY R TG+SRGFAFVTMSS+E+C +I+NLDGS+Y GR
Sbjct: 121 AQLAGMIQEYGTPEMVEVLYHRETGRSRGFAFVTMSSIEDCETVIENLDGSQYMGR 176
Score = 58.5 bits (140), Expect = 2e-06
Identities = 31/69 (44%), Positives = 39/69 (56%)
Frame = -2
Query: 210 KLYFGNLPYLCDSAQLAGIIQEYASPELVEVLYDRNTGKSRGFAFVTMSSVEECNIIIQN 31
KL+ GNL + S L QEY + VLYD TGKSRG+ FV S+ EE +Q+
Sbjct: 199 KLFIGNLSWSVTSESLTQAFQEYGNVVGARVLYDGETGKSRGYGFVCYSTKEELETALQS 258
Query: 30 LDGSEYGGR 4
L+G E GR
Sbjct: 259 LNGVELEGR 267
>ref|XP_011029743.1| PREDICTED: 29 kDa ribonucleoprotein, chloroplastic-like [Populus
euphratica]
Length = 279
Score = 137 bits (346), Expect = 2e-30
Identities = 79/176 (44%), Positives = 103/176 (58%), Gaps = 6/176 (3%)
Frame = -2
Query: 513 SMHSLKCISSKNWPNDHLLIKISCPKTLQPALVSHSLGIELNPTNGVCTKWRAPRIXXXX 334
S+H+LKC+ K+ P D L+K+S P + A +S S + + P + V WR PR+
Sbjct: 17 SIHTLKCMHVKHCPFDQTLLKVS-PVRIMLATLSRSNYV-IEPLSQVAASWRVPRVSADV 74
Query: 333 XXXXXXXXXXXXXXXXXXXXXXXXVLASDGVAAAENSG------ANTKLYFGNLPYLCDS 172
+ + +A+ E G NTKLYFGNLPY DS
Sbjct: 75 AQEEAPATAPA--------------VEEEELASGETEGEADQVPVNTKLYFGNLPYNVDS 120
Query: 171 AQLAGIIQEYASPELVEVLYDRNTGKSRGFAFVTMSSVEECNIIIQNLDGSEYGGR 4
AQLAG+IQ+Y SPE+VEVLY R TGKSRGFAFVTMSS+E+C +I+NLDGS+Y GR
Sbjct: 121 AQLAGMIQKYGSPEMVEVLYHRETGKSRGFAFVTMSSIEDCEAVIENLDGSQYMGR 176
Score = 58.5 bits (140), Expect = 2e-06
Identities = 31/69 (44%), Positives = 39/69 (56%)
Frame = -2
Query: 210 KLYFGNLPYLCDSAQLAGIIQEYASPELVEVLYDRNTGKSRGFAFVTMSSVEECNIIIQN 31
KL+ GNL + S L QEY + VLYD TGKSRG+ FV S+ EE +Q+
Sbjct: 199 KLFIGNLSWSVTSESLTQAFQEYGNVVGARVLYDGETGKSRGYGFVCYSTKEEMETALQS 258
Query: 30 LDGSEYGGR 4
L+G E GR
Sbjct: 259 LNGVELEGR 267
>ref|XP_002528350.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
gi|223532218|gb|EEF34022.1| ribonucleoprotein,
chloroplast, putative [Ricinus communis]
Length = 285
Score = 134 bits (338), Expect = 2e-29
Identities = 79/174 (45%), Positives = 102/174 (58%), Gaps = 4/174 (2%)
Frame = -2
Query: 513 SMHSLKCISSKNWPNDHLLIKISCPKTLQPALVSHSLGIELNPTNGVCTKWRAPRIXXXX 334
S+H+LKC +SK+ P+D LL S + ++ S IE P + V WR+
Sbjct: 16 SIHTLKCTNSKHLPSDSLLRLPSAHRVALASIYHRSYAIE--PLSQVAVSWRS-----VA 68
Query: 333 XXXXXXXXXXXXXXXXXXXXXXXXVLASDGVAAAEN----SGANTKLYFGNLPYLCDSAQ 166
+A +G A E + NTKLYFGNLPY DSAQ
Sbjct: 69 RLVSAAVAQEEAAVTAPVEEDEQQQVAEEGEAEPEAEPEAAPINTKLYFGNLPYNVDSAQ 128
Query: 165 LAGIIQEYASPELVEVLYDRNTGKSRGFAFVTMSSVEECNIIIQNLDGSEYGGR 4
LAGIIQ+Y +PELVEVLYDR+TG+SRGFAFVTMS+VE+CN +I+NLDGS++ GR
Sbjct: 129 LAGIIQDYGTPELVEVLYDRDTGRSRGFAFVTMSTVEDCNAVIENLDGSQFMGR 182
>ref|XP_010667102.1| PREDICTED: 28 kDa ribonucleoprotein, chloroplastic-like [Beta
vulgaris subsp. vulgaris] gi|870842120|gb|KMS95618.1|
hypothetical protein BVRB_006660 [Beta vulgaris subsp.
vulgaris]
Length = 291
Score = 134 bits (337), Expect = 3e-29
Identities = 63/82 (76%), Positives = 70/82 (85%)
Frame = -2
Query: 249 DGVAAAENSGANTKLYFGNLPYLCDSAQLAGIIQEYASPELVEVLYDRNTGKSRGFAFVT 70
D E NTKLYFGNLPYLCDSAQLAGI+QEY +PELVEVLY+R TGKSRGFAFVT
Sbjct: 107 DDKGGDEVEAVNTKLYFGNLPYLCDSAQLAGIVQEYGTPELVEVLYNRVTGKSRGFAFVT 166
Query: 69 MSSVEECNIIIQNLDGSEYGGR 4
MSS+E+CN +I+NLDGSEYGGR
Sbjct: 167 MSSIEDCNAVIENLDGSEYGGR 188
>ref|XP_002314506.1| RNA-binding protein RNP1 precursor [Populus trichocarpa]
gi|222863546|gb|EEF00677.1| RNA-binding protein RNP1
precursor [Populus trichocarpa]
Length = 279
Score = 134 bits (336), Expect = 3e-29
Identities = 78/171 (45%), Positives = 97/171 (56%), Gaps = 1/171 (0%)
Frame = -2
Query: 513 SMHSLKCISSKNWPNDHLLIKISCPKTLQPALVSHSLGIELNPTNGVCTKWRAPRIXXXX 334
S+H+ K + K+ P H L+K+S + + +L IE P + V WR PR+
Sbjct: 17 SIHTFKRMHIKHCPLSHSLLKVSPARIMLASLYRSDYAIE--PLSQVAVTWRVPRVSASV 74
Query: 333 XXXXXXXXXXXXXXXXXXXXXXXXVLASDGVAAAENS-GANTKLYFGNLPYLCDSAQLAG 157
LAS+ N NTKLYFGNLPY DSAQLAG
Sbjct: 75 AQEEAPATASAVEEEE---------LASEEAKGETNEIPVNTKLYFGNLPYNVDSAQLAG 125
Query: 156 IIQEYASPELVEVLYDRNTGKSRGFAFVTMSSVEECNIIIQNLDGSEYGGR 4
IIQEY SPE+VEVLY R TG+SRGFAFVTMSS+E+CN +I+NLD S+Y GR
Sbjct: 126 IIQEYGSPEMVEVLYHRETGRSRGFAFVTMSSIEDCNAVIENLDESQYMGR 176
>ref|XP_006838974.1| PREDICTED: 28 kDa ribonucleoprotein, chloroplastic [Amborella
trichopoda] gi|548841480|gb|ERN01543.1| hypothetical
protein AMTR_s00002p00271280 [Amborella trichopoda]
Length = 288
Score = 134 bits (336), Expect = 3e-29
Identities = 64/75 (85%), Positives = 69/75 (92%)
Frame = -2
Query: 228 NSGANTKLYFGNLPYLCDSAQLAGIIQEYASPELVEVLYDRNTGKSRGFAFVTMSSVEEC 49
+S +TKLYFGNLPY CDSAQLAGI+QEY SPELVEVLYDRNTGKSRGFAFVTMSSVE+
Sbjct: 111 SSDESTKLYFGNLPYGCDSAQLAGIVQEYGSPELVEVLYDRNTGKSRGFAFVTMSSVEDA 170
Query: 48 NIIIQNLDGSEYGGR 4
N +IQNLDGSEYGGR
Sbjct: 171 NAVIQNLDGSEYGGR 185
Score = 57.0 bits (136), Expect = 5e-06
Identities = 30/69 (43%), Positives = 39/69 (56%)
Frame = -2
Query: 210 KLYFGNLPYLCDSAQLAGIIQEYASPELVEVLYDRNTGKSRGFAFVTMSSVEECNIIIQN 31
KL+ GNL + S L+ I EY + VLYD TGKSRG+ FV S+ E +Q+
Sbjct: 208 KLFVGNLSWSVTSESLSQIFGEYGNVVGARVLYDGETGKSRGYGFVCYSTKSEMETALQS 267
Query: 30 LDGSEYGGR 4
LDG + GR
Sbjct: 268 LDGMDLEGR 276
>emb|CAN83111.1| hypothetical protein VITISV_026573 [Vitis vinifera]
Length = 355
Score = 134 bits (336), Expect = 3e-29
Identities = 63/75 (84%), Positives = 68/75 (90%)
Frame = -2
Query: 225 SGANTKLYFGNLPYLCDSAQLAGIIQEYASPELVEVLYDRNTGKSRGFAFVTMSSVEECN 46
S NTKLYFGNLPY CDSA LAGIIQ Y SPELVEVLYDR+TG+SRGFAFVTMSSVE+CN
Sbjct: 62 SPVNTKLYFGNLPYSCDSAHLAGIIQNYGSPELVEVLYDRDTGRSRGFAFVTMSSVEDCN 121
Query: 45 IIIQNLDGSEYGGRT 1
+I+NLDGSEYGGRT
Sbjct: 122 AVIENLDGSEYGGRT 136
>ref|XP_010940713.1| PREDICTED: 28 kDa ribonucleoprotein, chloroplastic isoform X2
[Elaeis guineensis]
Length = 269
Score = 133 bits (335), Expect = 5e-29
Identities = 63/81 (77%), Positives = 71/81 (87%)
Frame = -2
Query: 243 VAAAENSGANTKLYFGNLPYLCDSAQLAGIIQEYASPELVEVLYDRNTGKSRGFAFVTMS 64
V A + NTKLYFGNLPY CDSAQLAGIIQEYA+PELVEVLYDR+TG+SRGFAFVTMS
Sbjct: 100 VVVAAPAQQNTKLYFGNLPYSCDSAQLAGIIQEYANPELVEVLYDRDTGRSRGFAFVTMS 159
Query: 63 SVEECNIIIQNLDGSEYGGRT 1
S+E+C +IQNLDGS+Y GRT
Sbjct: 160 SIEDCEAVIQNLDGSQYSGRT 180