BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Perilla23_contig00008341
         (2490 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011072348.1| PREDICTED: chloroplastic group IIA intron sp...   996   0.0  
ref|XP_012856334.1| PREDICTED: chloroplastic group IIA intron sp...   951   0.0  
ref|XP_009767017.1| PREDICTED: chloroplastic group IIA intron sp...   872   0.0  
ref|XP_009614576.1| PREDICTED: chloroplastic group IIA intron sp...   872   0.0  
ref|XP_010663603.1| PREDICTED: chloroplastic group IIA intron sp...   863   0.0  
ref|XP_010663604.1| PREDICTED: chloroplastic group IIA intron sp...   863   0.0  
emb|CAN72582.1| hypothetical protein VITISV_035294 [Vitis vinifera]   863   0.0  
emb|CDO98426.1| unnamed protein product [Coffea canephora]            862   0.0  
ref|XP_004235759.1| PREDICTED: chloroplastic group IIA intron sp...   861   0.0  
ref|XP_006341605.1| PREDICTED: chloroplastic group IIA intron sp...   853   0.0  
ref|XP_007036533.1| CRS1 / YhbY domain-containing protein [Theob...   853   0.0  
gb|EPS74467.1| hypothetical protein M569_00278, partial [Genlise...   842   0.0  
ref|XP_012093011.1| PREDICTED: chloroplastic group IIA intron sp...   841   0.0  
gb|KCW83864.1| hypothetical protein EUGRSUZ_B00725 [Eucalyptus g...   838   0.0  
ref|XP_010045645.1| PREDICTED: chloroplastic group IIA intron sp...   838   0.0  
ref|XP_010265125.1| PREDICTED: chloroplastic group IIA intron sp...   837   0.0  
ref|XP_012440290.1| PREDICTED: chloroplastic group IIA intron sp...   828   0.0  
ref|XP_012440292.1| PREDICTED: chloroplastic group IIA intron sp...   828   0.0  
ref|XP_011045859.1| PREDICTED: chloroplastic group IIA intron sp...   827   0.0  
gb|KHG01961.1| Chloroplastic group IIA intron splicing facilitat...   827   0.0  

>ref|XP_011072348.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic [Sesamum indicum]
          Length = 821

 Score =  996 bits (2574), Expect = 0.0
 Identities = 502/637 (78%), Positives = 550/637 (86%)
 Frame = -2

Query: 1985 NYSVSRNVECGDEKLGDLLKRDWVRPDTILKEDEEFDSESLLPWERGVSXXXXXXXXXXX 1806
            N   S NVE GDEKLGDLLKRDWVRPDTIL E++++DS+SLLPWERGV+           
Sbjct: 139  NLHDSTNVEFGDEKLGDLLKRDWVRPDTILVENDDYDSDSLLPWERGVNEDEEMDEDRVA 198

Query: 1805 XXKRAMRAPSMAXXXXXXXXXXXXXRIGMTLRERVSVPKAGITGAVLEKIHEKWRRCELV 1626
              KR MRAP++A             R+GMTLRERV+VPKAGITGAVLEKIH+KWR+ ELV
Sbjct: 199  VKKRPMRAPTLAELTLEDEELRRLRRMGMTLRERVNVPKAGITGAVLEKIHDKWRKSELV 258

Query: 1625 RLKFHEELAHDMKTAHEIVERRTGGLVTWRSGSVMVVYRGANYEGPTLKPQRVNSENDTL 1446
            RLKFHE+LAHDMKTAHEIVERRTGGLVTWRSGSVMVV+RG NYEGP  KPQR+NSE+D L
Sbjct: 259  RLKFHEDLAHDMKTAHEIVERRTGGLVTWRSGSVMVVFRGTNYEGPISKPQRMNSEDDAL 318

Query: 1445 FVPDASSPDNPDTKSSDGKIQVLVKSNPVVPNRVKNLTEEEVEYNNLLDGLGPRFEDWWG 1266
            FVP+ SS DN  T++SDGK  V+ KSNPV+  R ++++EEE EYN LLDGLGPRFEDWWG
Sbjct: 319  FVPNVSSLDNSVTRTSDGKSPVIEKSNPVISARAESMSEEEAEYNRLLDGLGPRFEDWWG 378

Query: 1265 TGVLPVDADLLPLTIPGYKTPFRLLPMGMRPRLTNAEMTNLRKLAKSLPCHFALGRNRNH 1086
            TGVLPVDADLLP TIPGYKTPFRLLP GMRPRLTNAEMTNLRKLAKSLPCHFALGRNRNH
Sbjct: 379  TGVLPVDADLLPQTIPGYKTPFRLLPAGMRPRLTNAEMTNLRKLAKSLPCHFALGRNRNH 438

Query: 1085 QGLAASIIKLWEKSLIVKIAVKRGIQNTNNKIMSEELKTLTGGVLLLRNKYFIVMYRGKD 906
            QGLA SIIKLWEKSL+VKIAVKRGIQNTNNKIM+EELK LTGGVLLLRNKY+IVMYRGKD
Sbjct: 439  QGLAISIIKLWEKSLLVKIAVKRGIQNTNNKIMAEELKKLTGGVLLLRNKYYIVMYRGKD 498

Query: 905  FLPPTVASALAERQEMTKQIQDVEEKVRGGPVALPVSEEKGALAGTLAEFYEAQARWGTE 726
            FL P+VA+ALAERQEMTKQIQD+EEKVRGGPVA+PV+EEK ALAGTLAEFYEAQARWGT 
Sbjct: 499  FLSPSVAAALAERQEMTKQIQDIEEKVRGGPVAVPVAEEKEALAGTLAEFYEAQARWGTN 558

Query: 725  ISAEEREKMIEEASRAKHERVIRRLEHXXXXXXXXXXXXXXXXXKIVASWLPVDPSDDQE 546
            ISAEE EKMIEEASRAK +RVIRR EH                 KIVASW+PV PSDDQE
Sbjct: 559  ISAEEHEKMIEEASRAKRDRVIRRFEHKIAIAQAKKLKAEKLLSKIVASWVPVSPSDDQE 618

Query: 545  TITDEERVMFRKVGLRMKPYLPLGIRGVFDGVIENMHLHWKHREVVKLISKEKERAFAEE 366
            TITDEERVM+R+VGLRMK YLPLGIRGVFDGVIENMHLHWKHRE+VKLISKEKE AF EE
Sbjct: 619  TITDEERVMYRRVGLRMKAYLPLGIRGVFDGVIENMHLHWKHRELVKLISKEKELAFVEE 678

Query: 365  TARLLEYESGGILVSIDRVPKGYSLIYYRGKNYRRPITIRPRNLLTKAKALKRRMALQRY 186
            TARLLEYESGGILV+I+RVPKG++LIYYRGKNYRRPIT+RPRNLLTKAKALKRR+ALQRY
Sbjct: 679  TARLLEYESGGILVAIERVPKGHALIYYRGKNYRRPITLRPRNLLTKAKALKRRVALQRY 738

Query: 185  EALSQHISEVEQTIEQTKKEIGNTENRENSSAWKSED 75
            EALSQHISE+E+TIEQ K+EIGN+ N ENS  W SED
Sbjct: 739  EALSQHISELEKTIEQMKQEIGNSANLENSKHWNSED 775


>ref|XP_012856334.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic [Erythranthe guttatus]
            gi|604301943|gb|EYU21529.1| hypothetical protein
            MIMGU_mgv1a001412mg [Erythranthe guttata]
          Length = 824

 Score =  951 bits (2459), Expect = 0.0
 Identities = 483/648 (74%), Positives = 543/648 (83%), Gaps = 4/648 (0%)
 Frame = -2

Query: 1997 SDSLNYSVSRNVECGDEKLGDLLKRDWVRPDTILKEDEE---FDSESLLPWERGVSXXXX 1827
            +D+L+ + S N E GDEKLGDLL+RDWVRPDTIL EDEE   +DS++LLPWER V     
Sbjct: 133  NDNLDLNDSANAEFGDEKLGDLLQRDWVRPDTILDEDEEEEDYDSDALLPWERSVDEDDE 192

Query: 1826 XXXXXXXXXKRAMRAPSMAXXXXXXXXXXXXXRIGMTLRERVSVPKAGITGAVLEKIHEK 1647
                     KR+MRAPS+A             R GMTLRERV+VPKAG+TGAVLEKIH+ 
Sbjct: 193  MDDDGAGPAKRSMRAPSLAELTIEDEELRRLRRNGMTLRERVNVPKAGVTGAVLEKIHDT 252

Query: 1646 WRRCELVRLKFHEELAHDMKTAHEIVERRTGGLVTWRSGSVMVVYRGANYEGPTLKPQRV 1467
            WRR ELVRLKFHE+LAHDM+TAHEIVERRTGGL+TWRSGSVMVVYRGANYEGP  KPQR+
Sbjct: 253  WRRSELVRLKFHEDLAHDMRTAHEIVERRTGGLITWRSGSVMVVYRGANYEGPVSKPQRM 312

Query: 1466 NSENDTLFVPDASSPDNPDTKSSDGKIQVLVKSNPVVPNR-VKNLTEEEVEYNNLLDGLG 1290
            NSE+D  FVP+ SS DN   +++D   QVL +SNP   +R VK  TEEE EYN LLDGLG
Sbjct: 313  NSEDDAPFVPNVSSSDNSVAQNTDAGSQVLERSNPAAISRTVKKTTEEEAEYNTLLDGLG 372

Query: 1289 PRFEDWWGTGVLPVDADLLPLTIPGYKTPFRLLPMGMRPRLTNAEMTNLRKLAKSLPCHF 1110
            PRFEDWWG GVLPVDADLLP TIPGYKTPFRLLP GMR RLTNAEMTNLRKLAKSLP HF
Sbjct: 373  PRFEDWWGMGVLPVDADLLPGTIPGYKTPFRLLPTGMRSRLTNAEMTNLRKLAKSLPSHF 432

Query: 1109 ALGRNRNHQGLAASIIKLWEKSLIVKIAVKRGIQNTNNKIMSEELKTLTGGVLLLRNKYF 930
            ALGRNRNHQGLA SIIKLWEKSL+VKIAVKRGIQNTNNKIM+EELKTLTGGVLLLRNKY+
Sbjct: 433  ALGRNRNHQGLATSIIKLWEKSLLVKIAVKRGIQNTNNKIMAEELKTLTGGVLLLRNKYY 492

Query: 929  IVMYRGKDFLPPTVASALAERQEMTKQIQDVEEKVRGGPVALPVSEEKGALAGTLAEFYE 750
            IVMYRGKDFLPPTVA+ALAERQE+TK IQDVEEKVRG P A+PV+EEK A AGTLAEFYE
Sbjct: 493  IVMYRGKDFLPPTVATALAERQELTKHIQDVEEKVRGVPTAVPVAEEKEAAAGTLAEFYE 552

Query: 749  AQARWGTEISAEEREKMIEEASRAKHERVIRRLEHXXXXXXXXXXXXXXXXXKIVASWLP 570
            AQARWGT++SA++R+ MIEEASRA H RVIRRLEH                 KIV SW+P
Sbjct: 553  AQARWGTDVSAQDRQNMIEEASRANHARVIRRLEHKVAISQTKKLKAEKLLSKIVDSWVP 612

Query: 569  VDPSDDQETITDEERVMFRKVGLRMKPYLPLGIRGVFDGVIENMHLHWKHREVVKLISKE 390
            ++PSDD ETITDEE+VM+RKVGLRM+ YLP+GIRGVFDGVIENMHLHWKHRE+VKLISKE
Sbjct: 613  INPSDDMETITDEEKVMYRKVGLRMRAYLPMGIRGVFDGVIENMHLHWKHRELVKLISKE 672

Query: 389  KERAFAEETARLLEYESGGILVSIDRVPKGYSLIYYRGKNYRRPITIRPRNLLTKAKALK 210
            KE ++ EETARLLEYESGGILVS+DRVPKG++LIYYRGKNY RP+T+RPRNLLTKAKALK
Sbjct: 673  KELSYVEETARLLEYESGGILVSVDRVPKGHALIYYRGKNYSRPLTLRPRNLLTKAKALK 732

Query: 209  RRMALQRYEALSQHISEVEQTIEQTKKEIGNTENRENSSAWKSEDHGQ 66
            RR+ALQRYEALSQHISE+EQ IEQTK++IG+T  +ENS    S+++GQ
Sbjct: 733  RRVALQRYEALSQHISELEQHIEQTKQQIGSTGKQENSKRSNSKENGQ 780


>ref|XP_009767017.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic [Nicotiana sylvestris]
            gi|698444931|ref|XP_009767027.1| PREDICTED: chloroplastic
            group IIA intron splicing facilitator CRS1, chloroplastic
            [Nicotiana sylvestris]
          Length = 831

 Score =  872 bits (2254), Expect = 0.0
 Identities = 445/632 (70%), Positives = 511/632 (80%), Gaps = 2/632 (0%)
 Frame = -2

Query: 1997 SDSLNYSVSRNVECGDEKLGDLLKRDWVRPDTILKE-DEEFDSESLLPWERGVSXXXXXX 1821
            + +LN S +      +EKLGDLLKRDWVRPD IL E D++   ++LLPWER V       
Sbjct: 145  NSNLNSSSAVPSNGEEEKLGDLLKRDWVRPDMILGESDDDEGDDTLLPWERNVEEGEVVV 204

Query: 1820 XXXXXXXKRAMRAPSMAXXXXXXXXXXXXXRIGMTLRERVSVPKAGITGAVLEKIHEKWR 1641
                   +R ++AP++A             R GMTLRERVSVPKAGITGAVLEKIH+ WR
Sbjct: 205  EEQRGGKRRTVKAPTLAELTIEDEELRRLRRNGMTLRERVSVPKAGITGAVLEKIHDAWR 264

Query: 1640 RCELVRLKFHEELAHDMKTAHEIVERRTGGLVTWRSGSVMVVYRGANYEGPTLKPQRVNS 1461
            + ELVRLKFHE LAHDM+T HEIVERRTGGLV WR+GSVMVVYRG+NYEGP+L+ + VN 
Sbjct: 265  KNELVRLKFHEVLAHDMRTGHEIVERRTGGLVIWRAGSVMVVYRGSNYEGPSLRSRSVNE 324

Query: 1460 ENDTLFVPDASSPDNPDTKSSDGKIQVLVKSNPVVPNRVKNLTEEEVEYNNLLDGLGPRF 1281
              + LFVPD SS D    K       V+   N V P+RV+++TEEE E+N LLDGLGPR+
Sbjct: 325  NGNALFVPDVSS-DKSIAKDDKSSNPVIENRNQVHPHRVQSMTEEEAEFNRLLDGLGPRY 383

Query: 1280 EDWWGTGVLPVDADLLPLTIPGYKTPFRLLPMGMRPRLTNAEMTNLRKLAKSLPCHFALG 1101
            EDWWGTGV+PVDADLLP TIPGYKTPFRLLP GMR RLTNAEMTNLRK+AKSLPCHFALG
Sbjct: 384  EDWWGTGVIPVDADLLPQTIPGYKTPFRLLPTGMRSRLTNAEMTNLRKIAKSLPCHFALG 443

Query: 1100 RNRNHQGLAASIIKLWEKSLIVKIAVKRGIQNTNNKIMSEELKTLTGGVLLLRNKYFIVM 921
            RNRNHQGLAA+IIKLWEKSL+VKIAVKRGIQNTNNK+M+EELK LTGGVLLLRNKY+I+ 
Sbjct: 444  RNRNHQGLAAAIIKLWEKSLVVKIAVKRGIQNTNNKLMAEELKKLTGGVLLLRNKYYIIF 503

Query: 920  YRGKDFLPPTVASALAERQEMTKQIQDVEEKVRGGPV-ALPVSEEKGALAGTLAEFYEAQ 744
            YRGKDFLPPTVA+ALAERQE+TKQIQDVEEK R GP    P++ +  A+AGTLAEFYEAQ
Sbjct: 504  YRGKDFLPPTVAAALAERQEITKQIQDVEEKTRSGPAEPAPLATDAQAVAGTLAEFYEAQ 563

Query: 743  ARWGTEISAEEREKMIEEASRAKHERVIRRLEHXXXXXXXXXXXXXXXXXKIVASWLPVD 564
            ARWG EIS EEREKM++EA+RAK  RV++RLEH                 KIV SW+P  
Sbjct: 564  ARWGREISDEEREKMLKEAARAKIARVVKRLEHKLELSQAKKLKAEKILAKIVDSWIPAG 623

Query: 563  PSDDQETITDEERVMFRKVGLRMKPYLPLGIRGVFDGVIENMHLHWKHREVVKLISKEKE 384
            PSDD ETIT+EERVM+R+VGLRMK YLPLGIRGVFDGVIENMHLHWKHRE+VKLISKEKE
Sbjct: 624  PSDDLETITEEERVMYRRVGLRMKSYLPLGIRGVFDGVIENMHLHWKHRELVKLISKEKE 683

Query: 383  RAFAEETARLLEYESGGILVSIDRVPKGYSLIYYRGKNYRRPITIRPRNLLTKAKALKRR 204
             AF EETARLLEYESGGILV+IDRVPKGY+LI+YRGKNYRRPI++RPRNLLTKAKALKRR
Sbjct: 684  LAFVEETARLLEYESGGILVAIDRVPKGYALIFYRGKNYRRPISLRPRNLLTKAKALKRR 743

Query: 203  MALQRYEALSQHISEVEQTIEQTKKEIGNTEN 108
            +ALQRYEALSQH++E+E +IEQTK++IG+  N
Sbjct: 744  VALQRYEALSQHMTELETSIEQTKRQIGDVGN 775


>ref|XP_009614576.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic [Nicotiana tomentosiformis]
          Length = 834

 Score =  872 bits (2252), Expect = 0.0
 Identities = 442/623 (70%), Positives = 509/623 (81%), Gaps = 2/623 (0%)
 Frame = -2

Query: 1952 DEKLGDLLKRDWVRPDTILKE-DEEFDSESLLPWERGVSXXXXXXXXXXXXXKRAMRAPS 1776
            +EKLGDLLKRDWVRPD IL E D++   ++LLPWER V              +R ++AP+
Sbjct: 160  EEKLGDLLKRDWVRPDMILAESDDDEGDDTLLPWERSVEDGEVVVEEQRGGKRRTVKAPT 219

Query: 1775 MAXXXXXXXXXXXXXRIGMTLRERVSVPKAGITGAVLEKIHEKWRRCELVRLKFHEELAH 1596
            +A             R GMTLRERVSVPKAGITGAVLEKIH+ WR+ ELVRLKFHE LAH
Sbjct: 220  LAELTIEDEELRRLRRNGMTLRERVSVPKAGITGAVLEKIHDAWRKNELVRLKFHEVLAH 279

Query: 1595 DMKTAHEIVERRTGGLVTWRSGSVMVVYRGANYEGPTLKPQRVNSENDTLFVPDASSPDN 1416
            DM+T HEIVERRTGGLV WR+GSVMVVYRG+NYEGP+ + + V+ + +TLFVPD SS D 
Sbjct: 280  DMRTGHEIVERRTGGLVIWRAGSVMVVYRGSNYEGPSSRSRSVDEDGNTLFVPDVSS-DK 338

Query: 1415 PDTKSSDGKIQVLVKSNPVVPNRVKNLTEEEVEYNNLLDGLGPRFEDWWGTGVLPVDADL 1236
               K       V+   N V P+RV+N+TEEE E+N LLDGLGPR+EDWWGTGVLPVDADL
Sbjct: 339  SIAKDGKSSNPVIENRNQVHPHRVQNMTEEEAEFNRLLDGLGPRYEDWWGTGVLPVDADL 398

Query: 1235 LPLTIPGYKTPFRLLPMGMRPRLTNAEMTNLRKLAKSLPCHFALGRNRNHQGLAASIIKL 1056
            LP TIPGYKTPFRLLP GMR RLTNAEMTNLRK+AKSLPCHFALGRNRNHQGLAA+IIKL
Sbjct: 399  LPQTIPGYKTPFRLLPTGMRSRLTNAEMTNLRKIAKSLPCHFALGRNRNHQGLAAAIIKL 458

Query: 1055 WEKSLIVKIAVKRGIQNTNNKIMSEELKTLTGGVLLLRNKYFIVMYRGKDFLPPTVASAL 876
            WEKSL+VKIAVKRGIQNTNNK+M+EELK LTGGVLLLRNKY+I+ YRGKDFLPPTVA+AL
Sbjct: 459  WEKSLVVKIAVKRGIQNTNNKLMAEELKKLTGGVLLLRNKYYIIFYRGKDFLPPTVAAAL 518

Query: 875  AERQEMTKQIQDVEEKVRGGPV-ALPVSEEKGALAGTLAEFYEAQARWGTEISAEEREKM 699
            AERQE+TKQIQDVEEK R  P  A P+  +  A+AGTLAEFYEAQARWG EISAEER+KM
Sbjct: 519  AERQEITKQIQDVEEKTRSSPAEATPLGTDGQAVAGTLAEFYEAQARWGREISAEERDKM 578

Query: 698  IEEASRAKHERVIRRLEHXXXXXXXXXXXXXXXXXKIVASWLPVDPSDDQETITDEERVM 519
            ++EA+RAK +RV++RLEH                 KIV SW+P  PSDD ETIT+EERVM
Sbjct: 579  LKEAARAKIDRVVKRLEHKLELSQAKKLKVEKILAKIVDSWIPAGPSDDLETITEEERVM 638

Query: 518  FRKVGLRMKPYLPLGIRGVFDGVIENMHLHWKHREVVKLISKEKERAFAEETARLLEYES 339
            +R+VGLRMK YLPLGIRGVFDGVIENMHLHWKHRE+VKLISKEKE AF EETARLLEYES
Sbjct: 639  YRRVGLRMKSYLPLGIRGVFDGVIENMHLHWKHRELVKLISKEKELAFVEETARLLEYES 698

Query: 338  GGILVSIDRVPKGYSLIYYRGKNYRRPITIRPRNLLTKAKALKRRMALQRYEALSQHISE 159
            GGILV+IDRVPKGY+LI+YRGKNYRRPI++RPRNLLTKAKALKRR+ALQRYEALSQH++ 
Sbjct: 699  GGILVAIDRVPKGYALIFYRGKNYRRPISLRPRNLLTKAKALKRRVALQRYEALSQHMTA 758

Query: 158  VEQTIEQTKKEIGNTENRENSSA 90
            +E +IEQ K++IG+  N + +S+
Sbjct: 759  LETSIEQMKRQIGDVGNADINSS 781


>ref|XP_010663603.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic isoform X1 [Vitis vinifera]
          Length = 833

 Score =  863 bits (2230), Expect = 0.0
 Identities = 445/635 (70%), Positives = 514/635 (80%), Gaps = 5/635 (0%)
 Frame = -2

Query: 1955 GDEKLGDLLKRDWVRPDTILKEDEEFDSESLLPWERGVSXXXXXXXXXXXXXKRAMRAPS 1776
            GDEKLGDLL+RDWVRPD++L EDE+ D + +LPWERG                RA+RAP+
Sbjct: 152  GDEKLGDLLQRDWVRPDSMLIEDEDED-DMILPWERGEERQEEEGDGRLKR--RAVRAPT 208

Query: 1775 MAXXXXXXXXXXXXXRIGMTLRERVSVPKAGITGAVLEKIHEKWRRCELVRLKFHEELAH 1596
            +A             R+GMT+RER++VPKAGIT AVL KIHEKWR+ ELVRLKFHE LAH
Sbjct: 209  LAELTIEDEELRRLRRLGMTIRERINVPKAGITQAVLGKIHEKWRKEELVRLKFHEALAH 268

Query: 1595 DMKTAHEIVERRTGGLVTWRSGSVMVVYRGANYEGPTLKPQRVNSENDTLFVPDASSPDN 1416
            DMKTAHEIVERRTGGLVTWRSGSVMVV+RG NYEGP  KPQ V+ E D+LFVPD SS DN
Sbjct: 269  DMKTAHEIVERRTGGLVTWRSGSVMVVFRGTNYEGPP-KPQPVDGEGDSLFVPDVSSVDN 327

Query: 1415 PDTKSSDGKIQVLVKSNPVVPNRV--KNLTEEEVEYNNLLDGLGPRFEDWWGTGVLPVDA 1242
            P  ++ +     L K +  V N V  +N+TEEE EYN+LLDGLGPRF DWWGTGVLPVD 
Sbjct: 328  PAMRNDNNGGPTLEKGSLPVRNPVHAENMTEEEAEYNSLLDGLGPRFVDWWGTGVLPVDG 387

Query: 1241 DLLPLTIPGYKTPFRLLPMGMRPRLTNAEMTNLRKLAKSLPCHFALGRNRNHQGLAASII 1062
            DLLP +IPGYKTP R+LP GMRPRLTNAEMTNLRKLAKSLPCHFALGRNRNHQGLAA+II
Sbjct: 388  DLLPQSIPGYKTPLRILPTGMRPRLTNAEMTNLRKLAKSLPCHFALGRNRNHQGLAAAII 447

Query: 1061 KLWEKSLIVKIAVKRGIQNTNNKIMSEELKTLTGGVLLLRNKYFIVMYRGKDFLPPTVAS 882
            KLWEKS++VKIAVK GIQNTNNK+M+EE+K LTGGVLLLRNKY+IV+YRGKDFLP +VA+
Sbjct: 448  KLWEKSIVVKIAVKPGIQNTNNKLMAEEIKNLTGGVLLLRNKYYIVIYRGKDFLPTSVAA 507

Query: 881  ALAERQEMTKQIQDVEEKVR-GGPVALPVSEE--KGALAGTLAEFYEAQARWGTEISAEE 711
            AL+ER+E+TK IQ VEEKVR GG  A+P  E+     LAGTLAEFYEAQARWG EISAEE
Sbjct: 508  ALSEREELTKHIQVVEEKVRTGGAEAIPSGEDGVGQPLAGTLAEFYEAQARWGREISAEE 567

Query: 710  REKMIEEASRAKHERVIRRLEHXXXXXXXXXXXXXXXXXKIVASWLPVDPSDDQETITDE 531
             EKMIEEASRAK  RV++R+EH                 KI AS +P  PSDDQETITDE
Sbjct: 568  HEKMIEEASRAKSARVVKRIEHKLALAQAKKLRAERLLAKIEASMIPAGPSDDQETITDE 627

Query: 530  ERVMFRKVGLRMKPYLPLGIRGVFDGVIENMHLHWKHREVVKLISKEKERAFAEETARLL 351
            ER MFR++GLRMK YL LG+RGVFDGVIENMHLHWKHRE+VKLISK+K  AF E+TARLL
Sbjct: 628  ERFMFRRLGLRMKAYLLLGVRGVFDGVIENMHLHWKHRELVKLISKQKTLAFVEDTARLL 687

Query: 350  EYESGGILVSIDRVPKGYSLIYYRGKNYRRPITIRPRNLLTKAKALKRRMALQRYEALSQ 171
            EYESGGILV+I+RVPKGY+LIYYRGKNYRRP+++RPRNLLTKAKALKR +A+QR+EALSQ
Sbjct: 688  EYESGGILVAIERVPKGYALIYYRGKNYRRPVSLRPRNLLTKAKALKRSVAMQRHEALSQ 747

Query: 170  HISEVEQTIEQTKKEIGNTENRENSSAWKSEDHGQ 66
            HISE+E+TIEQ K EIG++++ E+  +W +E HGQ
Sbjct: 748  HISELERTIEQMKMEIGDSKDAEDKDSWSTEGHGQ 782


>ref|XP_010663604.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic isoform X2 [Vitis vinifera]
            gi|297734212|emb|CBI15459.3| unnamed protein product
            [Vitis vinifera]
          Length = 830

 Score =  863 bits (2230), Expect = 0.0
 Identities = 445/635 (70%), Positives = 514/635 (80%), Gaps = 5/635 (0%)
 Frame = -2

Query: 1955 GDEKLGDLLKRDWVRPDTILKEDEEFDSESLLPWERGVSXXXXXXXXXXXXXKRAMRAPS 1776
            GDEKLGDLL+RDWVRPD++L EDE+ D + +LPWERG                RA+RAP+
Sbjct: 152  GDEKLGDLLQRDWVRPDSMLIEDEDED-DMILPWERGEERQEEEGDGRLKR--RAVRAPT 208

Query: 1775 MAXXXXXXXXXXXXXRIGMTLRERVSVPKAGITGAVLEKIHEKWRRCELVRLKFHEELAH 1596
            +A             R+GMT+RER++VPKAGIT AVL KIHEKWR+ ELVRLKFHE LAH
Sbjct: 209  LAELTIEDEELRRLRRLGMTIRERINVPKAGITQAVLGKIHEKWRKEELVRLKFHEALAH 268

Query: 1595 DMKTAHEIVERRTGGLVTWRSGSVMVVYRGANYEGPTLKPQRVNSENDTLFVPDASSPDN 1416
            DMKTAHEIVERRTGGLVTWRSGSVMVV+RG NYEGP  KPQ V+ E D+LFVPD SS DN
Sbjct: 269  DMKTAHEIVERRTGGLVTWRSGSVMVVFRGTNYEGPP-KPQPVDGEGDSLFVPDVSSVDN 327

Query: 1415 PDTKSSDGKIQVLVKSNPVVPNRV--KNLTEEEVEYNNLLDGLGPRFEDWWGTGVLPVDA 1242
            P  ++ +     L K +  V N V  +N+TEEE EYN+LLDGLGPRF DWWGTGVLPVD 
Sbjct: 328  PAMRNDNNGGPTLEKGSLPVRNPVHAENMTEEEAEYNSLLDGLGPRFVDWWGTGVLPVDG 387

Query: 1241 DLLPLTIPGYKTPFRLLPMGMRPRLTNAEMTNLRKLAKSLPCHFALGRNRNHQGLAASII 1062
            DLLP +IPGYKTP R+LP GMRPRLTNAEMTNLRKLAKSLPCHFALGRNRNHQGLAA+II
Sbjct: 388  DLLPQSIPGYKTPLRILPTGMRPRLTNAEMTNLRKLAKSLPCHFALGRNRNHQGLAAAII 447

Query: 1061 KLWEKSLIVKIAVKRGIQNTNNKIMSEELKTLTGGVLLLRNKYFIVMYRGKDFLPPTVAS 882
            KLWEKS++VKIAVK GIQNTNNK+M+EE+K LTGGVLLLRNKY+IV+YRGKDFLP +VA+
Sbjct: 448  KLWEKSIVVKIAVKPGIQNTNNKLMAEEIKNLTGGVLLLRNKYYIVIYRGKDFLPTSVAA 507

Query: 881  ALAERQEMTKQIQDVEEKVR-GGPVALPVSEE--KGALAGTLAEFYEAQARWGTEISAEE 711
            AL+ER+E+TK IQ VEEKVR GG  A+P  E+     LAGTLAEFYEAQARWG EISAEE
Sbjct: 508  ALSEREELTKHIQVVEEKVRTGGAEAIPSGEDGVGQPLAGTLAEFYEAQARWGREISAEE 567

Query: 710  REKMIEEASRAKHERVIRRLEHXXXXXXXXXXXXXXXXXKIVASWLPVDPSDDQETITDE 531
             EKMIEEASRAK  RV++R+EH                 KI AS +P  PSDDQETITDE
Sbjct: 568  HEKMIEEASRAKSARVVKRIEHKLALAQAKKLRAERLLAKIEASMIPAGPSDDQETITDE 627

Query: 530  ERVMFRKVGLRMKPYLPLGIRGVFDGVIENMHLHWKHREVVKLISKEKERAFAEETARLL 351
            ER MFR++GLRMK YL LG+RGVFDGVIENMHLHWKHRE+VKLISK+K  AF E+TARLL
Sbjct: 628  ERFMFRRLGLRMKAYLLLGVRGVFDGVIENMHLHWKHRELVKLISKQKTLAFVEDTARLL 687

Query: 350  EYESGGILVSIDRVPKGYSLIYYRGKNYRRPITIRPRNLLTKAKALKRRMALQRYEALSQ 171
            EYESGGILV+I+RVPKGY+LIYYRGKNYRRP+++RPRNLLTKAKALKR +A+QR+EALSQ
Sbjct: 688  EYESGGILVAIERVPKGYALIYYRGKNYRRPVSLRPRNLLTKAKALKRSVAMQRHEALSQ 747

Query: 170  HISEVEQTIEQTKKEIGNTENRENSSAWKSEDHGQ 66
            HISE+E+TIEQ K EIG++++ E+  +W +E HGQ
Sbjct: 748  HISELERTIEQMKMEIGDSKDAEDKDSWSTEGHGQ 782


>emb|CAN72582.1| hypothetical protein VITISV_035294 [Vitis vinifera]
          Length = 850

 Score =  863 bits (2230), Expect = 0.0
 Identities = 445/635 (70%), Positives = 514/635 (80%), Gaps = 5/635 (0%)
 Frame = -2

Query: 1955 GDEKLGDLLKRDWVRPDTILKEDEEFDSESLLPWERGVSXXXXXXXXXXXXXKRAMRAPS 1776
            GDEKLGDLL+RDWVRPD++L EDE+ D + +LPWERG                RA+RAP+
Sbjct: 152  GDEKLGDLLQRDWVRPDSMLIEDEDED-DMILPWERGEERQEEEGDGRLKR--RAVRAPT 208

Query: 1775 MAXXXXXXXXXXXXXRIGMTLRERVSVPKAGITGAVLEKIHEKWRRCELVRLKFHEELAH 1596
            +A             R+GMT+RER++VPKAGIT AVL KIHEKWR+ ELVRLKFHE LAH
Sbjct: 209  LAELTIEDEELRRLRRLGMTIRERINVPKAGITQAVLGKIHEKWRKEELVRLKFHEALAH 268

Query: 1595 DMKTAHEIVERRTGGLVTWRSGSVMVVYRGANYEGPTLKPQRVNSENDTLFVPDASSPDN 1416
            DMKTAHEIVERRTGGLVTWRSGSVMVV+RG NYEGP  KPQ V+ E D+LFVPD SS DN
Sbjct: 269  DMKTAHEIVERRTGGLVTWRSGSVMVVFRGTNYEGPP-KPQPVDGEGDSLFVPDVSSVDN 327

Query: 1415 PDTKSSDGKIQVLVKSNPVVPNRV--KNLTEEEVEYNNLLDGLGPRFEDWWGTGVLPVDA 1242
            P  ++ +     L K +  V N V  +N+TEEE EYN+LLDGLGPRF DWWGTGVLPVD 
Sbjct: 328  PAMRNDNNGGPTLEKGSLPVRNPVHAENMTEEEAEYNSLLDGLGPRFVDWWGTGVLPVDG 387

Query: 1241 DLLPLTIPGYKTPFRLLPMGMRPRLTNAEMTNLRKLAKSLPCHFALGRNRNHQGLAASII 1062
            DLLP +IPGYKTP R+LP GMRPRLTNAEMTNLRKLAKSLPCHFALGRNRNHQGLAA+II
Sbjct: 388  DLLPQSIPGYKTPLRILPTGMRPRLTNAEMTNLRKLAKSLPCHFALGRNRNHQGLAAAII 447

Query: 1061 KLWEKSLIVKIAVKRGIQNTNNKIMSEELKTLTGGVLLLRNKYFIVMYRGKDFLPPTVAS 882
            KLWEKS++VKIAVK GIQNTNNK+M+EE+K LTGGVLLLRNKY+IV+YRGKDFLP +VA+
Sbjct: 448  KLWEKSIVVKIAVKPGIQNTNNKLMAEEIKNLTGGVLLLRNKYYIVIYRGKDFLPTSVAA 507

Query: 881  ALAERQEMTKQIQDVEEKVR-GGPVALPVSEE--KGALAGTLAEFYEAQARWGTEISAEE 711
            AL+ER+E+TK IQ VEEKVR GG  A+P  E+     LAGTLAEFYEAQARWG EISAEE
Sbjct: 508  ALSEREELTKHIQVVEEKVRTGGAEAIPSGEDGVGQPLAGTLAEFYEAQARWGREISAEE 567

Query: 710  REKMIEEASRAKHERVIRRLEHXXXXXXXXXXXXXXXXXKIVASWLPVDPSDDQETITDE 531
             EKMIEEASRAK  RV++R+EH                 KI AS +P  PSDDQETITDE
Sbjct: 568  HEKMIEEASRAKSARVVKRIEHKLALAQAKKLRPERLLAKIEASMIPAGPSDDQETITDE 627

Query: 530  ERVMFRKVGLRMKPYLPLGIRGVFDGVIENMHLHWKHREVVKLISKEKERAFAEETARLL 351
            ER MFR++GLRMK YL LG+RGVFDGVIENMHLHWKHRE+VKLISK+K  AF E+TARLL
Sbjct: 628  ERFMFRRLGLRMKAYLLLGVRGVFDGVIENMHLHWKHRELVKLISKQKTLAFVEDTARLL 687

Query: 350  EYESGGILVSIDRVPKGYSLIYYRGKNYRRPITIRPRNLLTKAKALKRRMALQRYEALSQ 171
            EYESGGILV+I+RVPKGY+LIYYRGKNYRRP+++RPRNLLTKAKALKR +A+QR+EALSQ
Sbjct: 688  EYESGGILVAIERVPKGYALIYYRGKNYRRPVSLRPRNLLTKAKALKRSVAMQRHEALSQ 747

Query: 170  HISEVEQTIEQTKKEIGNTENRENSSAWKSEDHGQ 66
            HISE+E+TIEQ K EIG++++ E+  +W +E HGQ
Sbjct: 748  HISELERTIEQMKMEIGDSKDAEDKDSWSTEGHGQ 782


>emb|CDO98426.1| unnamed protein product [Coffea canephora]
          Length = 837

 Score =  862 bits (2226), Expect = 0.0
 Identities = 442/630 (70%), Positives = 502/630 (79%), Gaps = 2/630 (0%)
 Frame = -2

Query: 1955 GDEKLGDLLKRDWVRPDTILKEDEEFDSESLLPWERGVSXXXXXXXXXXXXXKRAMRAPS 1776
            G+EKLGDLLKRDWVRPD +L ED E    +LLPWE+                +R  +AP+
Sbjct: 158  GEEKLGDLLKRDWVRPDMMLVEDGEDADSTLLPWEKEELAAAAEAEEGVLGKRRTPKAPT 217

Query: 1775 MAXXXXXXXXXXXXXRIGMTLRERVSVPKAGITGAVLEKIHEKWRRCELVRLKFHEELAH 1596
            +A             R+GMTLRER++V KAG+TG VLEKIH+KWR+ ELVRLKFHE LAH
Sbjct: 218  LAELTIEDGELRRLRRMGMTLRERINVAKAGVTGEVLEKIHDKWRKNELVRLKFHESLAH 277

Query: 1595 DMKTAHEIVERRTGGLVTWRSGSVMVVYRGANYEGPTLKPQRVNSENDTLFVPDASSPDN 1416
            DMKTAHEIVERRT GLV WRSGSVMVVYRG NYEGP  + Q    E +T FVP+ S P  
Sbjct: 278  DMKTAHEIVERRTRGLVIWRSGSVMVVYRGTNYEGPLSRSQSEGGEGETPFVPNVS-PSG 336

Query: 1415 PDTKSSDGKIQ-VLVKSNPVVPNRVKNLTEEEVEYNNLLDGLGPRFEDWWGTGVLPVDAD 1239
                + +G +  VL KSNP V N V+++TEEE+EYN+LL GLGPRFEDWWGTGV PVDAD
Sbjct: 337  TSLATKNGIVYPVLEKSNPAVTNGVESMTEEEIEYNSLLGGLGPRFEDWWGTGVHPVDAD 396

Query: 1238 LLPLTIPGYKTPFRLLPMGMRPRLTNAEMTNLRKLAKSLPCHFALGRNRNHQGLAASIIK 1059
            LLP TIPGYKTPFRL+P+GMR  LTNAEMTNLRKLAKSLPCHFALGRNRNHQGLAA+IIK
Sbjct: 397  LLPQTIPGYKTPFRLIPVGMRSHLTNAEMTNLRKLAKSLPCHFALGRNRNHQGLAAAIIK 456

Query: 1058 LWEKSLIVKIAVKRGIQNTNNKIMSEELKTLTGGVLLLRNKYFIVMYRGKDFLPPTVASA 879
            LWEKSLIVKIAVKRGIQNTNNK+M++ELK+LTGGVLLLRNKYFIVMYRGKDFLPP+VA+A
Sbjct: 457  LWEKSLIVKIAVKRGIQNTNNKLMADELKSLTGGVLLLRNKYFIVMYRGKDFLPPSVATA 516

Query: 878  LAERQEMTKQIQDVEEKVRGGPV-ALPVSEEKGALAGTLAEFYEAQARWGTEISAEEREK 702
            LAERQEMTKQ Q VEE+ + GP    PV +    LAGTLAEFYEAQARWG EIS ++RE 
Sbjct: 517  LAERQEMTKQSQTVEEEAKIGPSNTAPVGQGGEPLAGTLAEFYEAQARWGREISRQDRET 576

Query: 701  MIEEASRAKHERVIRRLEHXXXXXXXXXXXXXXXXXKIVASWLPVDPSDDQETITDEERV 522
            MIEEASRAK  RV++RLEH                 K+V+SW+P DP DDQETITDEERV
Sbjct: 577  MIEEASRAKTARVVKRLEHKLAIAQAKKLKAERLLAKMVSSWIPADPDDDQETITDEERV 636

Query: 521  MFRKVGLRMKPYLPLGIRGVFDGVIENMHLHWKHREVVKLISKEKERAFAEETARLLEYE 342
            MFR+VGLRMK YLP+GIRGVFDGVIENMHLHWKHRE+VKL+SKEKE AF EETARLLEYE
Sbjct: 637  MFRRVGLRMKAYLPIGIRGVFDGVIENMHLHWKHRELVKLLSKEKELAFVEETARLLEYE 696

Query: 341  SGGILVSIDRVPKGYSLIYYRGKNYRRPITIRPRNLLTKAKALKRRMALQRYEALSQHIS 162
            SGGILV+I+RVPKGY LI+YRGKNYRRPI++RPRNLLTKAKALKRR+ALQRYEALSQHI 
Sbjct: 697  SGGILVAIERVPKGYVLIFYRGKNYRRPISLRPRNLLTKAKALKRRVALQRYEALSQHIH 756

Query: 161  EVEQTIEQTKKEIGNTENRENSSAWKSEDH 72
            EVE  IEQ K EIG+++ +E+      +DH
Sbjct: 757  EVENNIEQIKGEIGDSKEKESIGVSNLKDH 786


>ref|XP_004235759.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic [Solanum lycopersicum]
            gi|723685649|ref|XP_010318614.1| PREDICTED: chloroplastic
            group IIA intron splicing facilitator CRS1, chloroplastic
            [Solanum lycopersicum] gi|723685652|ref|XP_010318615.1|
            PREDICTED: chloroplastic group IIA intron splicing
            facilitator CRS1, chloroplastic [Solanum lycopersicum]
          Length = 820

 Score =  861 bits (2225), Expect = 0.0
 Identities = 443/633 (69%), Positives = 508/633 (80%), Gaps = 4/633 (0%)
 Frame = -2

Query: 1988 LNYSVSRNVECGDEKLGDLLKRDWVRPDTILKEDEEFDSESLLPWERGVSXXXXXXXXXX 1809
            L+ S +  V   +EKLGDLLKRDWVRPD IL+E ++ + ++ LPWER V           
Sbjct: 144  LDSSSTMQVNGEEEKLGDLLKRDWVRPDMILEESDD-EGDTYLPWERSVEEEAVEVQRGG 202

Query: 1808 XXXKRAMRAPSMAXXXXXXXXXXXXXRIGMTLRERVSVPKAGITGAVLEKIHEKWRRCEL 1629
                R +RAPS+A             RIGMTLRER++VPKAG+TGAVLEKIH  WR+ EL
Sbjct: 203  K---RTVRAPSLAELTIEDEELRRLRRIGMTLRERINVPKAGVTGAVLEKIHHSWRKNEL 259

Query: 1628 VRLKFHEELAHDMKTAHEIVERRTGGLVTWRSGSVMVVYRGANYEGPTLKPQRVNSENDT 1449
            VRLKFHE LAHDM+T HEIVERRT GLV WR+GSVMVVYRG+NYEGP+ + Q VN E++ 
Sbjct: 260  VRLKFHEVLAHDMRTGHEIVERRTKGLVIWRAGSVMVVYRGSNYEGPSSRSQSVNEEDNA 319

Query: 1448 LFVPDASSPDNPDTKSSDGKIQVLVKSNPVVPNRVKNLTEEEVEYNNLLDGLGPRFEDWW 1269
            LFVPD SS D   TK +     V+   N V PNRV+++TEEE E+N +LDGLGPRFEDWW
Sbjct: 320  LFVPDVSS-DKSITKDNKSFNPVIENRNQVHPNRVQSMTEEESEFNRVLDGLGPRFEDWW 378

Query: 1268 GTGVLPVDADLLPLTIPGYKTPFRLLPMGMRPRLTNAEMTNLRKLAKSLPCHFALGRNRN 1089
            GTGVLPVDADLLP TIPGYKTPFRLLP GMR RLTNAEMTNLRK+AKSLPCHFALGRNRN
Sbjct: 379  GTGVLPVDADLLPQTIPGYKTPFRLLPTGMRSRLTNAEMTNLRKIAKSLPCHFALGRNRN 438

Query: 1088 HQGLAASIIKLWEKSLIVKIAVKRGIQNTNNKIMSEELKTLTGGVLLLRNKYFIVMYRGK 909
            HQGLAA+I+KLWEKSL+VKIAVKRGIQNTNNK+MSEELK LTGGVLLLRNKY+I+ YRGK
Sbjct: 439  HQGLAAAIVKLWEKSLVVKIAVKRGIQNTNNKLMSEELKMLTGGVLLLRNKYYIIFYRGK 498

Query: 908  DFLPPTVASALAERQEMTKQIQDVEEKVRGGPVAL-PVSEEKGALAGTLAEFYEAQARWG 732
            DF+PPTVA+ LAERQE+TKQIQDVEE+ R GP  + P+  +  A+AG+LAEFYEAQARWG
Sbjct: 499  DFVPPTVAAVLAERQELTKQIQDVEEQTRSGPAKVAPLITDGQAVAGSLAEFYEAQARWG 558

Query: 731  TEISAEEREKMIEEASRAKHERVIRRLEHXXXXXXXXXXXXXXXXXKIVASWLPVDPSDD 552
             EISAEERE+M++EA+ AK  RV++RLEH                 KIV SW+P  PSDD
Sbjct: 559  REISAEERERMLKEAAMAKMARVVKRLEHKFEISQTKKLKAEKILAKIVESWIPAGPSDD 618

Query: 551  QETITDEERVMFRKVGLRMKPYLPLGIRGVFDGVIENMHLHWKHREVVKLISKEKERAFA 372
             ETIT+EERVM R+VGLRMK YLPLGIRGVFDGVIENMHLHWKHRE+VKLISKEK  AF 
Sbjct: 619  LETITEEERVMLRRVGLRMKSYLPLGIRGVFDGVIENMHLHWKHRELVKLISKEKVLAFV 678

Query: 371  EETARLLEYESGGILVSIDRVPKGYSLIYYRGKNYRRPITIRPRNLLTKAKALKRRMALQ 192
            EETARLLEYESGGILV+I+RVPKGY+LI+YRGKNYRRPI++RPRNLLTKAKALKRR+ALQ
Sbjct: 679  EETARLLEYESGGILVAIERVPKGYALIFYRGKNYRRPISLRPRNLLTKAKALKRRVALQ 738

Query: 191  RYEALSQHISEVEQTIEQTKKEI---GNTENRE 102
            RYEALSQHI E+E TIEQTK +I   G+T N E
Sbjct: 739  RYEALSQHIGELETTIEQTKSKIVDFGDTSNLE 771


>ref|XP_006341605.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Solanum tuberosum]
          Length = 824

 Score =  853 bits (2203), Expect = 0.0
 Identities = 435/623 (69%), Positives = 503/623 (80%), Gaps = 1/623 (0%)
 Frame = -2

Query: 1988 LNYSVSRNVECGDEKLGDLLKRDWVRPDTILKEDEEFDSESLLPWERGVSXXXXXXXXXX 1809
            L+ S +  V   +EKLGDLLKRDWVRPD IL+E ++ + ++ LPWER V           
Sbjct: 144  LDSSSTMQVNGEEEKLGDLLKRDWVRPDMILEESDD-EGDTYLPWERSVEEEAVEVQRGG 202

Query: 1808 XXXKRAMRAPSMAXXXXXXXXXXXXXRIGMTLRERVSVPKAGITGAVLEKIHEKWRRCEL 1629
                R ++APS+A             R+GMTLRER++VPKAG+TGAVLEKIH  WR+ EL
Sbjct: 203  K---RTVKAPSLAELTIEDEELRRLRRMGMTLRERINVPKAGVTGAVLEKIHHSWRKNEL 259

Query: 1628 VRLKFHEELAHDMKTAHEIVERRTGGLVTWRSGSVMVVYRGANYEGPTLKPQRVNSENDT 1449
            VRLKFHE LAHDM+T HEIVERRT GLV WR+GSVMVVYRG+NYEGP+ + Q VN E++ 
Sbjct: 260  VRLKFHEVLAHDMRTGHEIVERRTRGLVIWRAGSVMVVYRGSNYEGPSSRSQSVNEEDNA 319

Query: 1448 LFVPDASSPDNPDTKSSDGKIQVLVKSNPVVPNRVKNLTEEEVEYNNLLDGLGPRFEDWW 1269
            LFVPD SS D   TK +     V+   N V PN V+++T EE E+N +LDGLGPRFEDWW
Sbjct: 320  LFVPDVSS-DKSITKDNKSFNPVIENRNQVHPNSVQSMTVEESEFNRVLDGLGPRFEDWW 378

Query: 1268 GTGVLPVDADLLPLTIPGYKTPFRLLPMGMRPRLTNAEMTNLRKLAKSLPCHFALGRNRN 1089
            GTGVLPVDADLLP TIPGYKTPFRLLP GMR RLTNAEMTNLRK+AKSLPCHFALGRNRN
Sbjct: 379  GTGVLPVDADLLPQTIPGYKTPFRLLPTGMRSRLTNAEMTNLRKIAKSLPCHFALGRNRN 438

Query: 1088 HQGLAASIIKLWEKSLIVKIAVKRGIQNTNNKIMSEELKTLTGGVLLLRNKYFIVMYRGK 909
            HQGLAA+I+KLWEKSL+VKIAVKRGIQNTNNK+MSEELK LTGGVLLLRNKY+I+ YRGK
Sbjct: 439  HQGLAAAIVKLWEKSLVVKIAVKRGIQNTNNKLMSEELKMLTGGVLLLRNKYYIIFYRGK 498

Query: 908  DFLPPTVASALAERQEMTKQIQDVEEKVRGGPVAL-PVSEEKGALAGTLAEFYEAQARWG 732
            DF+PPTVA+ LAERQE+TKQIQDVEE+ R GP  + P++ +  A+AG+LAEFYEAQARWG
Sbjct: 499  DFVPPTVAAVLAERQELTKQIQDVEEQTRSGPAKVAPLTTDGQAVAGSLAEFYEAQARWG 558

Query: 731  TEISAEEREKMIEEASRAKHERVIRRLEHXXXXXXXXXXXXXXXXXKIVASWLPVDPSDD 552
             EISAEERE+M++EA+ AK  RV++RLEH                 KIV SW+P  PSDD
Sbjct: 559  REISAEERERMLKEAAMAKTARVVKRLEHKFEISQTKKLKAEKILAKIVESWIPAGPSDD 618

Query: 551  QETITDEERVMFRKVGLRMKPYLPLGIRGVFDGVIENMHLHWKHREVVKLISKEKERAFA 372
             ETIT+EERVM R+VGLRMK YLPLGIRGVFDGVIENMHLHWKHRE+VKLISKEK  AF 
Sbjct: 619  LETITEEERVMLRRVGLRMKSYLPLGIRGVFDGVIENMHLHWKHRELVKLISKEKVLAFV 678

Query: 371  EETARLLEYESGGILVSIDRVPKGYSLIYYRGKNYRRPITIRPRNLLTKAKALKRRMALQ 192
            EETARLLEYESGGILV+I+RVPKGY+LI+YRGKNYRRPI++RPRNLLTKAKALKRR+ALQ
Sbjct: 679  EETARLLEYESGGILVAIERVPKGYALIFYRGKNYRRPISLRPRNLLTKAKALKRRVALQ 738

Query: 191  RYEALSQHISEVEQTIEQTKKEI 123
            RYEALSQHI+E+E TIEQTK +I
Sbjct: 739  RYEALSQHIAELETTIEQTKSKI 761


>ref|XP_007036533.1| CRS1 / YhbY domain-containing protein [Theobroma cacao]
            gi|508773778|gb|EOY21034.1| CRS1 / YhbY domain-containing
            protein [Theobroma cacao]
          Length = 919

 Score =  853 bits (2203), Expect = 0.0
 Identities = 445/634 (70%), Positives = 512/634 (80%), Gaps = 4/634 (0%)
 Frame = -2

Query: 1955 GDEKLGDLLKRDWVRPDTILKEDEEFDSESLLPWERGVSXXXXXXXXXXXXXKRAMRAPS 1776
            G+E+LGDLLKR+WVRPDT+L E E+   E++LPWER  +             KR +RAP+
Sbjct: 219  GEERLGDLLKREWVRPDTMLIEREK--EEAVLPWERDEAEVEVVKEGVLGVKKRRVRAPT 276

Query: 1775 MAXXXXXXXXXXXXXRIGMTLRERVSVPKAGITGAVLEKIHEKWRRCELVRLKFHEELAH 1596
            +A             R+GM LRER++VPKAGIT AVLEKIH+KWR+ ELVRLKFHE LA 
Sbjct: 277  LAELTIEDEELRRLRRMGMYLRERINVPKAGITQAVLEKIHDKWRKEELVRLKFHEVLAT 336

Query: 1595 DMKTAHEIVERRTGGLVTWRSGSVMVVYRGANYEGPTLKPQRVNSENDTLFVPDASSPDN 1416
            DMKTAHEIVERRTGGLV WRSGSVMVVYRG+NYEGP+ + Q ++ E + LF+PD SS  N
Sbjct: 337  DMKTAHEIVERRTGGLVLWRSGSVMVVYRGSNYEGPS-RSQSIDREGEALFIPDVSSASN 395

Query: 1415 PDTKSSDGKIQVLVKSNPVV--PNRVKNLTEEEVEYNNLLDGLGPRFEDWWGTGVLPVDA 1242
                S  GK     K  PVV  P R +++TEEE EYN+LLDG+GPRF +WWGTGVLPVDA
Sbjct: 396  AVRGSETGKTSTPEKCEPVVVKPERSESMTEEEAEYNSLLDGVGPRFVEWWGTGVLPVDA 455

Query: 1241 DLLPLTIPGYKTPFRLLPMGMRPRLTNAEMTNLRKLAKSLPCHFALGRNRNHQGLAASII 1062
            DLLP  IPGYKTPFRLLP GMRPRLTNAEMTNLRKLAKSLPCHFALGRNRNHQGLAA+II
Sbjct: 456  DLLPQKIPGYKTPFRLLPAGMRPRLTNAEMTNLRKLAKSLPCHFALGRNRNHQGLAAAII 515

Query: 1061 KLWEKSLIVKIAVKRGIQNTNNKIMSEELKTLTGGVLLLRNKYFIVMYRGKDFLPPTVAS 882
            KLWEKSL+VKIAVKRGIQNTNNK+M+EELK LTGGVLLLRNKYFIV+YRGKDFLP +VA+
Sbjct: 516  KLWEKSLVVKIAVKRGIQNTNNKLMAEELKNLTGGVLLLRNKYFIVIYRGKDFLPTSVAA 575

Query: 881  ALAERQEMTKQIQDVEEKVRGGPVALPVS-EEKG-ALAGTLAEFYEAQARWGTEISAEER 708
            ALAERQE+TKQIQDVEEKVR   V    S E+KG A AGTLAEFYEAQA WG EISAEER
Sbjct: 576  ALAERQELTKQIQDVEEKVRIRAVEPAQSGEDKGEAPAGTLAEFYEAQACWGREISAEER 635

Query: 707  EKMIEEASRAKHERVIRRLEHXXXXXXXXXXXXXXXXXKIVASWLPVDPSDDQETITDEE 528
            EKMIEEAS+AKH R+++R+EH                 KI +S +P  P  DQETITDEE
Sbjct: 636  EKMIEEASKAKHARLVKRVEHKLAVAQAKKLRAERLLAKIESSMIPAAPDYDQETITDEE 695

Query: 527  RVMFRKVGLRMKPYLPLGIRGVFDGVIENMHLHWKHREVVKLISKEKERAFAEETARLLE 348
            RVMFR+VGLRMKPYLPLGIRGVFDGVIENMHLHWKHRE+VKLISK+K  AF E+TARLLE
Sbjct: 696  RVMFRRVGLRMKPYLPLGIRGVFDGVIENMHLHWKHRELVKLISKQKTLAFVEDTARLLE 755

Query: 347  YESGGILVSIDRVPKGYSLIYYRGKNYRRPITIRPRNLLTKAKALKRRMALQRYEALSQH 168
            +ESGGILV+I+RVPKGY+LIYYRGKNY RPI++RPRNLLTKAKALKR +A+QR+EALSQH
Sbjct: 756  FESGGILVAIERVPKGYALIYYRGKNYHRPISLRPRNLLTKAKALKRSVAMQRHEALSQH 815

Query: 167  ISEVEQTIEQTKKEIGNTENRENSSAWKSEDHGQ 66
            ISE+E+TIE+ KKEIG +++ E+  +  S +HGQ
Sbjct: 816  ISELERTIEEMKKEIGASQDVEDEDSQVSGEHGQ 849


>gb|EPS74467.1| hypothetical protein M569_00278, partial [Genlisea aurea]
          Length = 693

 Score =  842 bits (2174), Expect = 0.0
 Identities = 430/634 (67%), Positives = 504/634 (79%), Gaps = 9/634 (1%)
 Frame = -2

Query: 1952 DEKLGDLLKRDWVRPDTILKEDEEFDSES--LLPWER-GVSXXXXXXXXXXXXXKRAMRA 1782
            +EKLGDLLKRDWVRPDTIL +D + DS+S  LLPWER G +             K  MRA
Sbjct: 42   EEKLGDLLKRDWVRPDTILVQDSDSDSDSELLLPWERRGNATEQDEMEAKGASRKGEMRA 101

Query: 1781 PSMAXXXXXXXXXXXXXRIGMTLRERVSVPKAGITGAVLEKIHEKWRRCELVRLKFHEEL 1602
            P+MA             R+GMTLRER++VPKAGITG +LEKIHEKWR+ ELVRLKFHEEL
Sbjct: 102  PTMAELTIEDEELRRLRRMGMTLRERINVPKAGITGVILEKIHEKWRKSELVRLKFHEEL 161

Query: 1601 AHDMKTAHEIVERRTGGLVTWRSGSVMVVYRGANYEGPTLKPQRVN--SENDTLFVPDAS 1428
            AHDMKTAH+IVERRTGGLVTWRSGSVMVV+RG NYEGP  KPQR N   E+D  FVP   
Sbjct: 162  AHDMKTAHQIVERRTGGLVTWRSGSVMVVFRGTNYEGPVSKPQRPNIDEEDDGPFVPTVP 221

Query: 1427 SPDNPDTKSSDGKIQVLVKSNPVVPNRVKNLTEEEVEYNNLLDGLGPRFEDWWGTGVLPV 1248
            S +   +++ D   + L K + ++ +  +++TE+E EYN LLDGLGPRFEDWWGTGVLPV
Sbjct: 222  SGEVVTSETGDSTSKTLEKPSRIIASAAESVTEQEAEYNMLLDGLGPRFEDWWGTGVLPV 281

Query: 1247 DADLLPLTIPGYKTPFRLLPMGMRPRLTNAEMTNLRKLAKSLPCHFALGRNRNHQGLAAS 1068
            DADLLP  +PGYKTPFRLLP+GMR RLTNAEMT+LRKLAK LP HFALG+NR HQGLA++
Sbjct: 282  DADLLPPAVPGYKTPFRLLPVGMRSRLTNAEMTHLRKLAKRLPSHFALGKNRKHQGLASA 341

Query: 1067 IIKLWEKSLIVKIAVKRGIQNTNNKIMSEELKTLTGGVLLLRNKYFIVMYRGKDFLPPTV 888
            I+KLWEKSL+VKIAVKRGIQNTNNK+M+EELK LTGGVLLLRNKY+I+MYRGKDFLPP+V
Sbjct: 342  IVKLWEKSLLVKIAVKRGIQNTNNKLMAEELKALTGGVLLLRNKYYIIMYRGKDFLPPSV 401

Query: 887  ASALAERQEMTKQIQDVEEKVRGGPVALPVS----EEKGALAGTLAEFYEAQARWGTEIS 720
            ASALAER EMTKQIQDVEE+VR GP A   +    + K A AGTL+EFYEAQ RWG EIS
Sbjct: 402  ASALAERNEMTKQIQDVEERVRRGPAAAITNGDDDDGKEASAGTLSEFYEAQVRWGMEIS 461

Query: 719  AEEREKMIEEASRAKHERVIRRLEHXXXXXXXXXXXXXXXXXKIVASWLPVDPSDDQETI 540
             ++R KM+EEASR+   + ++RLE                  KIV SW+PVDPSDDQETI
Sbjct: 462  PDQRNKMLEEASRSIKMKALKRLERKVAAAQAKKLRAEKLLSKIVDSWVPVDPSDDQETI 521

Query: 539  TDEERVMFRKVGLRMKPYLPLGIRGVFDGVIENMHLHWKHREVVKLISKEKERAFAEETA 360
            TDEERVM+R++GLRM PYLPLGIRGVFDGVIENMHLHWKHRE+VKLISKEKE +F EETA
Sbjct: 522  TDEERVMYRRLGLRMTPYLPLGIRGVFDGVIENMHLHWKHRELVKLISKEKETSFVEETA 581

Query: 359  RLLEYESGGILVSIDRVPKGYSLIYYRGKNYRRPITIRPRNLLTKAKALKRRMALQRYEA 180
            RLLEYESGGILV+I+RVPKG++LIYYRGKNY+RP+++RPRNLL K+ ALKRR+ALQRYEA
Sbjct: 582  RLLEYESGGILVAIERVPKGHALIYYRGKNYQRPLSLRPRNLLNKSNALKRRVALQRYEA 641

Query: 179  LSQHISEVEQTIEQTKKEIGNTENRENSSAWKSE 78
            LSQHISE+E+TI Q K+++  T+  E     + E
Sbjct: 642  LSQHISELEKTISQAKQQMAATDPPEEDEEEEEE 675


>ref|XP_012093011.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic [Jatropha curcas]
            gi|802797401|ref|XP_012093012.1| PREDICTED: chloroplastic
            group IIA intron splicing facilitator CRS1, chloroplastic
            [Jatropha curcas] gi|643686960|gb|KDP20125.1|
            hypothetical protein JCGZ_05894 [Jatropha curcas]
          Length = 839

 Score =  841 bits (2173), Expect = 0.0
 Identities = 431/639 (67%), Positives = 505/639 (79%), Gaps = 8/639 (1%)
 Frame = -2

Query: 1955 GDEKLGDLLKRDWVRPDTIL--KEDEEFDSESLLPWERGVSXXXXXXXXXXXXXKRAMRA 1782
            GDE+L DLL+R+WVRPDTI   ++DEE D + +LPW+R                KR ++A
Sbjct: 141  GDERLADLLQREWVRPDTIFSNRDDEESD-DLVLPWQRKEIEREERGGEGGRERKRTVKA 199

Query: 1781 PSMAXXXXXXXXXXXXXRIGMTLRERVSVPKAGITGAVLEKIHEKWRRCELVRLKFHEEL 1602
            P++A             ++GM +RER+SVPKAG+T  VLEKIH+KWR+ ELVRLKFHE L
Sbjct: 200  PTLAELTIEDEELRRLRKMGMFVRERISVPKAGLTKDVLEKIHDKWRKQELVRLKFHEVL 259

Query: 1601 AHDMKTAHEIVERRTGGLVTWRSGSVMVVYRGANYEGPTLKPQRVNSENDTLFVPDASSP 1422
            AHDMKTAHEI ERRTGGLV WR+GSVM+VYRG+NYEGP  KPQ V+ E D LF+PD SSP
Sbjct: 260  AHDMKTAHEITERRTGGLVIWRAGSVMMVYRGSNYEGPPSKPQSVDKEGDALFIPDVSSP 319

Query: 1421 DNPDTKSSDGKIQVLVKSNPVVP--NRVKNLTEEEVEYNNLLDGLGPRFEDWWGTGVLPV 1248
            D    ++ DG    + K    +   N  +N+TEEE E+N+LLD LGPRFE+WWGTG+LPV
Sbjct: 320  DTETLRNHDGVSSTVKKRELAIGRMNSAENMTEEEAEFNSLLDSLGPRFEEWWGTGILPV 379

Query: 1247 DADLLPLTIPGYKTPFRLLPMGMRPRLTNAEMTNLRKLAKSLPCHFALGRNRNHQGLAAS 1068
            DADLLP  IPGYKTPFRLLP GMR RLTNAEMTNLRKLAK+LPCHFALGRNRNHQGLAA+
Sbjct: 380  DADLLPPKIPGYKTPFRLLPTGMRSRLTNAEMTNLRKLAKTLPCHFALGRNRNHQGLAAA 439

Query: 1067 IIKLWEKSLIVKIAVKRGIQNTNNKIMSEELKTLTGGVLLLRNKYFIVMYRGKDFLPPTV 888
            I K+WEKSL+ KIAVKRGIQNTNNK+M++ELK LTGG+LLLRNKY+IV+YRGKDFLP +V
Sbjct: 440  IRKIWEKSLVAKIAVKRGIQNTNNKLMADELKMLTGGILLLRNKYYIVIYRGKDFLPTSV 499

Query: 887  ASALAERQEMTKQIQDVEEKVRGGPVALPVSEE--KGALAGTLAEFYEAQARWGTEISAE 714
            A+ALAERQE+TKQIQDVEEKVR   V   +SEE    ALAGTLAEFYEAQARWG  ISAE
Sbjct: 500  AAALAERQELTKQIQDVEEKVRSRGVETALSEEGQGKALAGTLAEFYEAQARWGKTISAE 559

Query: 713  EREKMIEEASRAKHERVIRRLEHXXXXXXXXXXXXXXXXXKIVASWLPVDPSDDQETITD 534
            EREKMIE+A+R+K  RV++R+EH                 KI AS LP  P  DQETITD
Sbjct: 560  EREKMIEDAARSKRARVVKRIEHKLAVAQAKKLRAERLLSKIEASMLPSGPDYDQETITD 619

Query: 533  EERVMFRKVGLRMKPYLPLGIRGVFDGVIENMHLHWKHREVVKLISKEKERAFAEETARL 354
            EER MFR+VGLRMK YLPLGIRGVFDGVIENMHLHWKHRE+VKLISK+K  AF E+TARL
Sbjct: 620  EERAMFRRVGLRMKAYLPLGIRGVFDGVIENMHLHWKHRELVKLISKQKTLAFVEDTARL 679

Query: 353  LEYESGGILVSIDRVPKGYSLIYYRGKNYRRPITIRPRNLLTKAKALKRRMALQRYEALS 174
            LEYESGGILV+I+RVPKG++LIYYRGKNYRRPI +RPRNLLTKAKALKR +A+QR+EALS
Sbjct: 680  LEYESGGILVAIERVPKGFALIYYRGKNYRRPINLRPRNLLTKAKALKRSVAMQRHEALS 739

Query: 173  QHISEVEQTIEQTKKEIGNTENRENSSAWKSE--DHGQL 63
            QHISE+E+TIE+ KKEIG +   E+ + W SE  +HG+L
Sbjct: 740  QHISELERTIEEMKKEIGFSPEEEDENNWTSEPKEHGRL 778


>gb|KCW83864.1| hypothetical protein EUGRSUZ_B00725 [Eucalyptus grandis]
          Length = 856

 Score =  838 bits (2165), Expect = 0.0
 Identities = 439/664 (66%), Positives = 502/664 (75%), Gaps = 34/664 (5%)
 Frame = -2

Query: 1955 GDEKLGDLLKRDWVRPDTILKEDE-EFDSESLLPWERGVSXXXXXXXXXXXXXKRAMRAP 1779
            G+E+LGDLL+R+W+RPD+ L+EDE E D   LLPWE+                KR+++AP
Sbjct: 152  GEERLGDLLRREWIRPDSFLEEDEREEDDAGLLPWEKEGKGEVKAEEKVVGGMKRSVKAP 211

Query: 1778 SMAXXXXXXXXXXXXXRIGMTLRERVSVPKAGITGAVLEKIHEKWRRCELVRLKFHEELA 1599
            S+A             R GM LRER+SV KAGIT AVLEKIH+KWR+ ELVRLKFHE LA
Sbjct: 212  SLAELTIEDEELRRLRRNGMYLRERISVAKAGITQAVLEKIHDKWRKEELVRLKFHEVLA 271

Query: 1598 HDMKTAHEIVERRTGGLVTWRSGSVMVVYRGANYEGPTLKPQRVNSENDTLFVPDASSPD 1419
            HDMKTAHE+VERRTGGLV WRSGSVMVVYRG NYEGP  + Q +  E D LF+PD SS +
Sbjct: 272  HDMKTAHEVVERRTGGLVIWRSGSVMVVYRGKNYEGPASRSQPIVREGDALFIPDVSSAN 331

Query: 1418 NPDTKSSDGKIQVLVKSNPVVPNRV--KNLTEEEVEYNNLLDGLGPRFEDWWGTGVLPVD 1245
                +S D       KS   V + V  ++LTEEE+EYN+LLDGLGPRFE+WWGTGVLPVD
Sbjct: 332  RAVAESGDDVKPEREKSEVSVRSPVLKESLTEEEIEYNDLLDGLGPRFEEWWGTGVLPVD 391

Query: 1244 ADLLPLTIPGYKTPFRLLPMGMRPRLTNAEMTNLRKLAKSLPCHFALGRNRNHQGLAASI 1065
            ADLLP  IPGYKTPFRLLP GMR RLTNAEMTNLRKLAKSLPCHFALGRNRNHQGLAA+I
Sbjct: 392  ADLLPQKIPGYKTPFRLLPTGMRSRLTNAEMTNLRKLAKSLPCHFALGRNRNHQGLAAAI 451

Query: 1064 IKLWEKSLIVKIAVKRGIQNTNNKIMSEELKTLTGGVLLLRNKYFIVMYRGKDFLPPTVA 885
            IKLWEKS +VKIAVKRGIQNTNNK+M++ELK LTGGVLLLRNKY+IV YRGKDFLPPTVA
Sbjct: 452  IKLWEKSSVVKIAVKRGIQNTNNKLMADELKDLTGGVLLLRNKYYIVFYRGKDFLPPTVA 511

Query: 884  SALAERQEMTKQIQDVEEKVRGGPV-------------------------------ALPV 798
            +AL+ERQE+ KQIQDVEEK+R G V                               A P 
Sbjct: 512  TALSERQELAKQIQDVEEKLRTGTVPPTVATALSERQELAKQIQDVEEKLQTGTVDAAPS 571

Query: 797  SEEKGALAGTLAEFYEAQARWGTEISAEEREKMIEEASRAKHERVIRRLEHXXXXXXXXX 618
             E   A AGTLAEFYEAQARWG +IS EEREKMIEEAS++K  R+++R+EH         
Sbjct: 572  KEAGYAQAGTLAEFYEAQARWGRDISNEEREKMIEEASKSKSVRLVKRIEHKLDLAQAKK 631

Query: 617  XXXXXXXXKIVASWLPVDPSDDQETITDEERVMFRKVGLRMKPYLPLGIRGVFDGVIENM 438
                    KI AS +P  P DDQETITDEER MFRKVGLRMKPYLPLGIRGVFDGVIENM
Sbjct: 632  LRADKLLSKIEASMVPASPDDDQETITDEERTMFRKVGLRMKPYLPLGIRGVFDGVIENM 691

Query: 437  HLHWKHREVVKLISKEKERAFAEETARLLEYESGGILVSIDRVPKGYSLIYYRGKNYRRP 258
            HLHWKHRE+VKLI+K+K R F E+TARLLE+ESGGILVSI+ VPKGY+LIYYRGKNYRRP
Sbjct: 692  HLHWKHRELVKLITKQKTRTFVEDTARLLEFESGGILVSIESVPKGYALIYYRGKNYRRP 751

Query: 257  ITIRPRNLLTKAKALKRRMALQRYEALSQHISEVEQTIEQTKKEIGNTENRENSSAWKSE 78
            I++RPRNLLTKAKALKR +A+QR+EALSQHISE+E TIEQ KKEIG++   E+   W S+
Sbjct: 752  ISLRPRNLLTKAKALKRSVAMQRHEALSQHISELEHTIEQMKKEIGDSCEIESEDPWSSK 811

Query: 77   DHGQ 66
             +GQ
Sbjct: 812  GNGQ 815


>ref|XP_010045645.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic [Eucalyptus grandis]
            gi|629119370|gb|KCW83860.1| hypothetical protein
            EUGRSUZ_B00725 [Eucalyptus grandis]
            gi|629119371|gb|KCW83861.1| hypothetical protein
            EUGRSUZ_B00725 [Eucalyptus grandis]
            gi|629119372|gb|KCW83862.1| hypothetical protein
            EUGRSUZ_B00725 [Eucalyptus grandis]
            gi|629119373|gb|KCW83863.1| hypothetical protein
            EUGRSUZ_B00725 [Eucalyptus grandis]
          Length = 861

 Score =  838 bits (2165), Expect = 0.0
 Identities = 439/664 (66%), Positives = 502/664 (75%), Gaps = 34/664 (5%)
 Frame = -2

Query: 1955 GDEKLGDLLKRDWVRPDTILKEDE-EFDSESLLPWERGVSXXXXXXXXXXXXXKRAMRAP 1779
            G+E+LGDLL+R+W+RPD+ L+EDE E D   LLPWE+                KR+++AP
Sbjct: 152  GEERLGDLLRREWIRPDSFLEEDEREEDDAGLLPWEKEGKGEVKAEEKVVGGMKRSVKAP 211

Query: 1778 SMAXXXXXXXXXXXXXRIGMTLRERVSVPKAGITGAVLEKIHEKWRRCELVRLKFHEELA 1599
            S+A             R GM LRER+SV KAGIT AVLEKIH+KWR+ ELVRLKFHE LA
Sbjct: 212  SLAELTIEDEELRRLRRNGMYLRERISVAKAGITQAVLEKIHDKWRKEELVRLKFHEVLA 271

Query: 1598 HDMKTAHEIVERRTGGLVTWRSGSVMVVYRGANYEGPTLKPQRVNSENDTLFVPDASSPD 1419
            HDMKTAHE+VERRTGGLV WRSGSVMVVYRG NYEGP  + Q +  E D LF+PD SS +
Sbjct: 272  HDMKTAHEVVERRTGGLVIWRSGSVMVVYRGKNYEGPASRSQPIVREGDALFIPDVSSAN 331

Query: 1418 NPDTKSSDGKIQVLVKSNPVVPNRV--KNLTEEEVEYNNLLDGLGPRFEDWWGTGVLPVD 1245
                +S D       KS   V + V  ++LTEEE+EYN+LLDGLGPRFE+WWGTGVLPVD
Sbjct: 332  RAVAESGDDVKPEREKSEVSVRSPVLKESLTEEEIEYNDLLDGLGPRFEEWWGTGVLPVD 391

Query: 1244 ADLLPLTIPGYKTPFRLLPMGMRPRLTNAEMTNLRKLAKSLPCHFALGRNRNHQGLAASI 1065
            ADLLP  IPGYKTPFRLLP GMR RLTNAEMTNLRKLAKSLPCHFALGRNRNHQGLAA+I
Sbjct: 392  ADLLPQKIPGYKTPFRLLPTGMRSRLTNAEMTNLRKLAKSLPCHFALGRNRNHQGLAAAI 451

Query: 1064 IKLWEKSLIVKIAVKRGIQNTNNKIMSEELKTLTGGVLLLRNKYFIVMYRGKDFLPPTVA 885
            IKLWEKS +VKIAVKRGIQNTNNK+M++ELK LTGGVLLLRNKY+IV YRGKDFLPPTVA
Sbjct: 452  IKLWEKSSVVKIAVKRGIQNTNNKLMADELKDLTGGVLLLRNKYYIVFYRGKDFLPPTVA 511

Query: 884  SALAERQEMTKQIQDVEEKVRGGPV-------------------------------ALPV 798
            +AL+ERQE+ KQIQDVEEK+R G V                               A P 
Sbjct: 512  TALSERQELAKQIQDVEEKLRTGTVPPTVATALSERQELAKQIQDVEEKLQTGTVDAAPS 571

Query: 797  SEEKGALAGTLAEFYEAQARWGTEISAEEREKMIEEASRAKHERVIRRLEHXXXXXXXXX 618
             E   A AGTLAEFYEAQARWG +IS EEREKMIEEAS++K  R+++R+EH         
Sbjct: 572  KEAGYAQAGTLAEFYEAQARWGRDISNEEREKMIEEASKSKSVRLVKRIEHKLDLAQAKK 631

Query: 617  XXXXXXXXKIVASWLPVDPSDDQETITDEERVMFRKVGLRMKPYLPLGIRGVFDGVIENM 438
                    KI AS +P  P DDQETITDEER MFRKVGLRMKPYLPLGIRGVFDGVIENM
Sbjct: 632  LRADKLLSKIEASMVPASPDDDQETITDEERTMFRKVGLRMKPYLPLGIRGVFDGVIENM 691

Query: 437  HLHWKHREVVKLISKEKERAFAEETARLLEYESGGILVSIDRVPKGYSLIYYRGKNYRRP 258
            HLHWKHRE+VKLI+K+K R F E+TARLLE+ESGGILVSI+ VPKGY+LIYYRGKNYRRP
Sbjct: 692  HLHWKHRELVKLITKQKTRTFVEDTARLLEFESGGILVSIESVPKGYALIYYRGKNYRRP 751

Query: 257  ITIRPRNLLTKAKALKRRMALQRYEALSQHISEVEQTIEQTKKEIGNTENRENSSAWKSE 78
            I++RPRNLLTKAKALKR +A+QR+EALSQHISE+E TIEQ KKEIG++   E+   W S+
Sbjct: 752  ISLRPRNLLTKAKALKRSVAMQRHEALSQHISELEHTIEQMKKEIGDSCEIESEDPWSSK 811

Query: 77   DHGQ 66
             +GQ
Sbjct: 812  GNGQ 815


>ref|XP_010265125.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic [Nelumbo nucifera]
          Length = 838

 Score =  837 bits (2163), Expect = 0.0
 Identities = 428/631 (67%), Positives = 499/631 (79%), Gaps = 4/631 (0%)
 Frame = -2

Query: 1955 GDEKLGDLLKRDWVRPDTILKEDEEFDSESLLPWERGVSXXXXXXXXXXXXXKRAMRAPS 1776
            G+EKLGDLLKR W RPD+IL EDE+   + LLPWER                K+ ++AP+
Sbjct: 168  GEEKLGDLLKRTWSRPDSILHEDEDEKGKMLLPWERDEDDQSEEEDGRGLKKKKRVKAPT 227

Query: 1775 MAXXXXXXXXXXXXXRIGMTLRERVSVPKAGITGAVLEKIHEKWRRCELVRLKFHEELAH 1596
            +A              +GMTLRERV++PKAG+T  +LEKIHEKWR+ ELVRLKFHE LAH
Sbjct: 228  LAELTIEDAELRRLRTLGMTLRERVNIPKAGVTQVILEKIHEKWRKSELVRLKFHETLAH 287

Query: 1595 DMKTAHEIVERRTGGLVTWRSGSVMVVYRGANYEGPTLKPQRVNSENDTLFVPDASSPDN 1416
            DMKTA EIVERRTGGLV WRSGS+MVVYRG+NYE P  + + V SE + LFVPD SS  N
Sbjct: 288  DMKTALEIVERRTGGLVIWRSGSIMVVYRGSNYE-PFSRLKTVESEGNALFVPDVSSSAN 346

Query: 1415 PDTKSSDGKIQVLVKSNPVV--PNRVKNLTEEEVEYNNLLDGLGPRFEDWWGTGVLPVDA 1242
              +K ++  +    K +P V  PN+ +++TEEE EYN+LLDGLGPRF DWWGTG+LPVDA
Sbjct: 347  SISKINNDIMSAPEKKDPGVQNPNQAESMTEEEAEYNSLLDGLGPRFVDWWGTGILPVDA 406

Query: 1241 DLLPLTIPGYKTPFRLLPMGMRPRLTNAEMTNLRKLAKSLPCHFALGRNRNHQGLAASII 1062
            DLLP TIP YKTPFRLLP GMRPRLTNAEMTNLRKLAKSLPCHFALGRNRNHQGLAA+I+
Sbjct: 407  DLLPQTIPSYKTPFRLLPTGMRPRLTNAEMTNLRKLAKSLPCHFALGRNRNHQGLAAAIV 466

Query: 1061 KLWEKSLIVKIAVKRGIQNTNNKIMSEELKTLTGGVLLLRNKYFIVMYRGKDFLPPTVAS 882
            KLW+KSL+ KIAVKRGIQNTNNK+M+EELK LTGGVLLLRNKY+IV+YRGKDFLP +VA 
Sbjct: 467  KLWDKSLVAKIAVKRGIQNTNNKLMAEELKKLTGGVLLLRNKYYIVIYRGKDFLPTSVAF 526

Query: 881  ALAERQEMTKQIQDVEEKVRGGPVALPVSEEKG--ALAGTLAEFYEAQARWGTEISAEER 708
            ALAERQE+TK+IQDVEEK R G V     EE G  ALAGTL+E+ EAQARWG EISAEE 
Sbjct: 527  ALAERQELTKEIQDVEEKARSGAVVSAHVEEIGGQALAGTLSEYREAQARWGREISAEEH 586

Query: 707  EKMIEEASRAKHERVIRRLEHXXXXXXXXXXXXXXXXXKIVASWLPVDPSDDQETITDEE 528
            EKM EEASRAK+ + ++R+EH                 KI  S +PV PSDDQETITDEE
Sbjct: 587  EKMKEEASRAKNAKAVKRIEHKLTVAQAKKLRAEKLLAKIEKSMVPVGPSDDQETITDEE 646

Query: 527  RVMFRKVGLRMKPYLPLGIRGVFDGVIENMHLHWKHREVVKLISKEKERAFAEETARLLE 348
            R MFR+VGLRMK YLPLGIRGVFDGVIENMHLHWKHRE+VKLISK+K  +F E+TARLLE
Sbjct: 647  RFMFRRVGLRMKAYLPLGIRGVFDGVIENMHLHWKHRELVKLISKQKTLSFVEDTARLLE 706

Query: 347  YESGGILVSIDRVPKGYSLIYYRGKNYRRPITIRPRNLLTKAKALKRRMALQRYEALSQH 168
            YESGGILV+I+RVPKGY+LIYYRGKNY+RPI++RPRNLLTKAKALKR +A+QR+EALSQH
Sbjct: 707  YESGGILVAIERVPKGYALIYYRGKNYQRPISLRPRNLLTKAKALKRSVAMQRHEALSQH 766

Query: 167  ISEVEQTIEQTKKEIGNTENRENSSAWKSED 75
            I+E+E+TIEQ K EIG +++ +    W  ED
Sbjct: 767  ITELERTIEQMKSEIGMSKDVDYEDTWSEED 797


>ref|XP_012440290.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic isoform X1 [Gossypium raimondii]
            gi|763785914|gb|KJB52985.1| hypothetical protein
            B456_008G286900 [Gossypium raimondii]
          Length = 868

 Score =  828 bits (2139), Expect = 0.0
 Identities = 429/632 (67%), Positives = 502/632 (79%), Gaps = 2/632 (0%)
 Frame = -2

Query: 1955 GDEKLGDLLKRDWVRPDTILKEDEEFDSESLLPWERGVSXXXXXXXXXXXXXKRAMRAPS 1776
            G+E+LGDLLKR+WVRPDT L E E+   E++LPWER  +             KR ++AP+
Sbjct: 147  GEERLGDLLKREWVRPDTRLIEKEK--EEAVLPWEREEAVVEVVVKEGGLLKKRTVKAPT 204

Query: 1775 MAXXXXXXXXXXXXXRIGMTLRERVSVPKAGITGAVLEKIHEKWRRCELVRLKFHEELAH 1596
            +A             R+GM LRER++VPKAGIT  VLEKIH+KWR+ ELVRLKFHE LA 
Sbjct: 205  LAELTIEDEELRRLRRMGMHLRERINVPKAGITKVVLEKIHDKWRKEELVRLKFHEFLAV 264

Query: 1595 DMKTAHEIVERRTGGLVTWRSGSVMVVYRGANYEGPTLKPQRVNSENDTLFVPDASSPDN 1416
            DM+TAHEIVERRTGGLV WRSGSVMVVYRG+NYEGP+   +  + E + LF+PD SS   
Sbjct: 265  DMRTAHEIVERRTGGLVIWRSGSVMVVYRGSNYEGPS---KSQSGEGEALFIPDVSSAGK 321

Query: 1415 PDTKSSDGKIQVLVKSNPVVPNRVKNLTEEEVEYNNLLDGLGPRFEDWWGTGVLPVDADL 1236
             ++++  G          V P R +++TEEE EYN+LLDGLGPRF +WWGTG+LPVDADL
Sbjct: 322  RESETGSGSTSEKSDKVVVKPERSESMTEEEAEYNSLLDGLGPRFVEWWGTGILPVDADL 381

Query: 1235 LPLTIPGYKTPFRLLPMGMRPRLTNAEMTNLRKLAKSLPCHFALGRNRNHQGLAASIIKL 1056
            LP  IPGYKTPFRLLP GMRPRLTNAEMTNLRK+AKSLPCHFALGRNRNHQGLAA+IIKL
Sbjct: 382  LPPKIPGYKTPFRLLPAGMRPRLTNAEMTNLRKIAKSLPCHFALGRNRNHQGLAAAIIKL 441

Query: 1055 WEKSLIVKIAVKRGIQNTNNKIMSEELKTLTGGVLLLRNKYFIVMYRGKDFLPPTVASAL 876
            WEKS++ KIAVKRGIQNTNNK+M+EELK LTGGVLLLRNKYFIV+YRGKDFLP  VA+AL
Sbjct: 442  WEKSVVAKIAVKRGIQNTNNKLMAEELKNLTGGVLLLRNKYFIVIYRGKDFLPTNVAAAL 501

Query: 875  AERQEMTKQIQDVEEKVRGGPVALPVS-EEKG-ALAGTLAEFYEAQARWGTEISAEEREK 702
            AERQ++TKQIQD EEK+R   V    S E+KG A AGTLAEFYEAQARWG +ISAEEREK
Sbjct: 502  AERQDLTKQIQDAEEKLRIKAVEPAQSGEDKGQAPAGTLAEFYEAQARWGRDISAEEREK 561

Query: 701  MIEEASRAKHERVIRRLEHXXXXXXXXXXXXXXXXXKIVASWLPVDPSDDQETITDEERV 522
            MIEEAS+AKH ++++R+EH                 KI AS +P  P  DQETITDEERV
Sbjct: 562  MIEEASKAKHAKLVKRVEHKLAIAQAKKLRAERLLAKIEASMIPAAPDYDQETITDEERV 621

Query: 521  MFRKVGLRMKPYLPLGIRGVFDGVIENMHLHWKHREVVKLISKEKERAFAEETARLLEYE 342
            MFR+VGLRMKPYLPLG+RGVFDGVIENMHLHWKHRE+VKLISK+K  AF E++ARLLEYE
Sbjct: 622  MFRRVGLRMKPYLPLGVRGVFDGVIENMHLHWKHRELVKLISKQKVLAFVEDSARLLEYE 681

Query: 341  SGGILVSIDRVPKGYSLIYYRGKNYRRPITIRPRNLLTKAKALKRRMALQRYEALSQHIS 162
            SGGILV+I+RVPKGY+LIYYRGKNYRRPI+IRPRNLLTKAKALKR +A+QR+EALSQHIS
Sbjct: 682  SGGILVAIERVPKGYALIYYRGKNYRRPISIRPRNLLTKAKALKRSVAMQRHEALSQHIS 741

Query: 161  EVEQTIEQTKKEIGNTENRENSSAWKSEDHGQ 66
            ++E TIEQ KKEI  +E+  + +   S +HGQ
Sbjct: 742  KLENTIEQMKKEIDASEDGGDDNNRSSGEHGQ 773


>ref|XP_012440292.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic isoform X3 [Gossypium raimondii]
          Length = 854

 Score =  828 bits (2138), Expect = 0.0
 Identities = 429/632 (67%), Positives = 502/632 (79%), Gaps = 2/632 (0%)
 Frame = -2

Query: 1955 GDEKLGDLLKRDWVRPDTILKEDEEFDSESLLPWERGVSXXXXXXXXXXXXXKRAMRAPS 1776
            G+E+LGDLLKR+WVRPDT L E E+   E++LPWER  +             KR ++AP+
Sbjct: 147  GEERLGDLLKREWVRPDTRLIEKEK--EEAVLPWEREEAVVEVVVKEGGLLKKRTVKAPT 204

Query: 1775 MAXXXXXXXXXXXXXRIGMTLRERVSVPKAGITGAVLEKIHEKWRRCELVRLKFHEELAH 1596
            +A             R+GM LRER++VPKAGIT  VLEKIH+KWR+ ELVRLKFHE LA 
Sbjct: 205  LAELTIEDEELRRLRRMGMHLRERINVPKAGITKVVLEKIHDKWRKEELVRLKFHEFLAV 264

Query: 1595 DMKTAHEIVERRTGGLVTWRSGSVMVVYRGANYEGPTLKPQRVNSENDTLFVPDASSPDN 1416
            DM+TAHEIVERRTGGLV WRSGSVMVVYRG+NYEGP+   +  + E + LF+PD SS   
Sbjct: 265  DMRTAHEIVERRTGGLVIWRSGSVMVVYRGSNYEGPS---KSQSGEGEALFIPDVSSAGK 321

Query: 1415 PDTKSSDGKIQVLVKSNPVVPNRVKNLTEEEVEYNNLLDGLGPRFEDWWGTGVLPVDADL 1236
             ++++  G          V P R +++TEEE EYN+LLDGLGPRF +WWGTG+LPVDADL
Sbjct: 322  RESETGSGSTSEKSDKVVVKPERSESMTEEEAEYNSLLDGLGPRFVEWWGTGILPVDADL 381

Query: 1235 LPLTIPGYKTPFRLLPMGMRPRLTNAEMTNLRKLAKSLPCHFALGRNRNHQGLAASIIKL 1056
            LP  IPGYKTPFRLLP GMRPRLTNAEMTNLRK+AKSLPCHFALGRNRNHQGLAA+IIKL
Sbjct: 382  LPPKIPGYKTPFRLLPAGMRPRLTNAEMTNLRKIAKSLPCHFALGRNRNHQGLAAAIIKL 441

Query: 1055 WEKSLIVKIAVKRGIQNTNNKIMSEELKTLTGGVLLLRNKYFIVMYRGKDFLPPTVASAL 876
            WEKS++ KIAVKRGIQNTNNK+M+EELK LTGGVLLLRNKYFIV+YRGKDFLP  VA+AL
Sbjct: 442  WEKSVVAKIAVKRGIQNTNNKLMAEELKNLTGGVLLLRNKYFIVIYRGKDFLPTNVAAAL 501

Query: 875  AERQEMTKQIQDVEEKVRGGPVALPVS-EEKG-ALAGTLAEFYEAQARWGTEISAEEREK 702
            AERQ++TKQIQD EEK+R   V    S E+KG A AGTLAEFYEAQARWG +ISAEEREK
Sbjct: 502  AERQDLTKQIQDAEEKLRIKAVEPAQSGEDKGQAPAGTLAEFYEAQARWGRDISAEEREK 561

Query: 701  MIEEASRAKHERVIRRLEHXXXXXXXXXXXXXXXXXKIVASWLPVDPSDDQETITDEERV 522
            MIEEAS+AKH ++++R+EH                 KI AS +P  P  DQETITDEERV
Sbjct: 562  MIEEASKAKHAKLVKRVEHKLAIAQAKKLRAERLLAKIEASMIPAAPDYDQETITDEERV 621

Query: 521  MFRKVGLRMKPYLPLGIRGVFDGVIENMHLHWKHREVVKLISKEKERAFAEETARLLEYE 342
            MFR+VGLRMKPYLPLG+RGVFDGVIENMHLHWKHRE+VKLISK+K  AF E++ARLLEYE
Sbjct: 622  MFRRVGLRMKPYLPLGVRGVFDGVIENMHLHWKHRELVKLISKQKVLAFVEDSARLLEYE 681

Query: 341  SGGILVSIDRVPKGYSLIYYRGKNYRRPITIRPRNLLTKAKALKRRMALQRYEALSQHIS 162
            SGGILV+I+RVPKGY+LIYYRGKNYRRPI+IRPRNLLTKAKALKR +A+QR+EALSQHIS
Sbjct: 682  SGGILVAIERVPKGYALIYYRGKNYRRPISIRPRNLLTKAKALKRSVAMQRHEALSQHIS 741

Query: 161  EVEQTIEQTKKEIGNTENRENSSAWKSEDHGQ 66
            ++E TIEQ KKEI  +E+ ++ +   S  HGQ
Sbjct: 742  KLENTIEQMKKEIDASEDGDDDNNRGSGKHGQ 773


>ref|XP_011045859.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic isoform X1 [Populus euphratica]
          Length = 806

 Score =  827 bits (2137), Expect = 0.0
 Identities = 425/637 (66%), Positives = 504/637 (79%), Gaps = 6/637 (0%)
 Frame = -2

Query: 1955 GDEKLGDLLKRDWVRPDTIL-KEDEEFDS-ESLLPWERGVSXXXXXXXXXXXXXKRAMRA 1782
            G+E+LGDLLKR+WVRPDT++   DE  DS ES+LPWER  S             KR ++A
Sbjct: 134  GEERLGDLLKREWVRPDTVVFSNDEGSDSDESVLPWEREESGAVEMEGGIESGRKRRVKA 193

Query: 1781 PSMAXXXXXXXXXXXXXRIGMTLRERVSVPKAGITGAVLEKIHEKWRRCELVRLKFHEEL 1602
            P++A             R+GM +RER+S+PKAGIT AVLE IH++WR+ ELVRLKFHE L
Sbjct: 194  PTLAELTIEDEELRRLRRMGMFIRERISIPKAGITNAVLENIHDRWRKEELVRLKFHEVL 253

Query: 1601 AHDMKTAHEIVERRTGGLVTWRSGSVMVVYRGANYEGPTLKPQRVNSENDTLFVPDASSP 1422
            AHDMKTAHEIVERRTGGLV WR+GSVMVV+RG NY+GP  K Q  + E D LFVPD SS 
Sbjct: 254  AHDMKTAHEIVERRTGGLVIWRAGSVMVVFRGTNYQGPPSKLQPADREGDALFVPDVSST 313

Query: 1421 DNPDTKSSDGKIQVLVKSNPV--VPNRVKNLTEEEVEYNNLLDGLGPRFEDWWGTGVLPV 1248
            D+  T+SS+       KS  V  +    +N+TEEE E N+LLDGLGPRFE+WWGTG+LPV
Sbjct: 314  DSVITRSSNIATSSSEKSKLVMRITEPTENMTEEEAELNSLLDGLGPRFEEWWGTGLLPV 373

Query: 1247 DADLLPLTIPGYKTPFRLLPMGMRPRLTNAEMTNLRKLAKSLPCHFALGRNRNHQGLAAS 1068
            DADLLP  +PGYKTPFRLLP+GMR RLTNAEMTN+RKLAK+LPCHFALGRNRNHQGLA +
Sbjct: 374  DADLLPPKVPGYKTPFRLLPVGMRARLTNAEMTNMRKLAKALPCHFALGRNRNHQGLAVA 433

Query: 1067 IIKLWEKSLIVKIAVKRGIQNTNNKIMSEELKTLTGGVLLLRNKYFIVMYRGKDFLPPTV 888
            I+KLWEKSL+ KIAVKRGIQNTNNK+M++ELK LTGGVLLLRNKY+IV++RGKDFLP +V
Sbjct: 434  ILKLWEKSLVAKIAVKRGIQNTNNKLMADELKMLTGGVLLLRNKYYIVIFRGKDFLPQSV 493

Query: 887  ASALAERQEMTKQIQDVEEKVRGGPV-ALPVSEEKG-ALAGTLAEFYEAQARWGTEISAE 714
            A+ALAERQE TKQIQDVEE+VR   V A P  E++G ALAGTLAEFYEAQARWG +IS E
Sbjct: 494  AAALAERQEATKQIQDVEERVRSNSVEAAPSGEDEGKALAGTLAEFYEAQARWGRDISTE 553

Query: 713  EREKMIEEASRAKHERVIRRLEHXXXXXXXXXXXXXXXXXKIVASWLPVDPSDDQETITD 534
            EREKMIEEAS+AK  R+++R EH                 KI  + +P  P  DQETI++
Sbjct: 554  EREKMIEEASKAKTARLVKRTEHKLAIAQAKKLRAERLLSKIETTMVPSGPDFDQETISE 613

Query: 533  EERVMFRKVGLRMKPYLPLGIRGVFDGVIENMHLHWKHREVVKLISKEKERAFAEETARL 354
            EERVMFR+VGLRMK YLPLGIRGVFDGVIENMHLHWKHRE+VKLISK+K  AF E+TA+L
Sbjct: 614  EERVMFRRVGLRMKAYLPLGIRGVFDGVIENMHLHWKHRELVKLISKQKTLAFVEDTAKL 673

Query: 353  LEYESGGILVSIDRVPKGYSLIYYRGKNYRRPITIRPRNLLTKAKALKRRMALQRYEALS 174
            LEYESGG+LV+I+RVPKG++LIYYRGKNYRRPI+IRPRNLLTKAKALKR +A+QR+EALS
Sbjct: 674  LEYESGGVLVAIERVPKGFALIYYRGKNYRRPISIRPRNLLTKAKALKRSVAMQRHEALS 733

Query: 173  QHISEVEQTIEQTKKEIGNTENRENSSAWKSEDHGQL 63
            QHI E+E+ IE+  KE+G ++  EN + W SE+H  L
Sbjct: 734  QHIFELEKNIEEMVKEMGLSKEEENENNWSSEEHAPL 770


>gb|KHG01961.1| Chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic [Gossypium arboreum]
          Length = 823

 Score =  827 bits (2137), Expect = 0.0
 Identities = 433/634 (68%), Positives = 506/634 (79%), Gaps = 4/634 (0%)
 Frame = -2

Query: 1955 GDEKLGDLLKRDWVRPDTILKEDEEFDSESLLPWERGVSXXXXXXXXXXXXXKRAMRAPS 1776
            G+E+LGDLLKR+WVRPDT L E E+   E++LPWER  +             KR ++AP+
Sbjct: 148  GEERLGDLLKREWVRPDTRLIEKEK--EEAVLPWEREEAVVEVVVKEGGLLKKRTVKAPT 205

Query: 1775 MAXXXXXXXXXXXXXRIGMTLRERVSVPKAGITGAVLEKIHEKWRRCELVRLKFHEELAH 1596
            +A             R+GM LRER++VPKAGIT  VLEKIH+KWR+ ELVRLKFHE LA 
Sbjct: 206  LAELTIEDEELRRLRRMGMHLRERINVPKAGITKVVLEKIHDKWRKEELVRLKFHEFLAV 265

Query: 1595 DMKTAHEIVERRTGGLVTWRSGSVMVVYRGANYEGPTLKPQRVNSENDTLFVPDASSPDN 1416
            DM+TAHEIVERRTGGLV WRSGSVMVVYRG+NYEGP+   +  + E + LF+PD SS   
Sbjct: 266  DMRTAHEIVERRTGGLVIWRSGSVMVVYRGSNYEGPS---KSQSGEGEALFIPDVSSAGK 322

Query: 1415 PDTKSSDGKIQVLVKSNPVV--PNRVKNLTEEEVEYNNLLDGLGPRFEDWWGTGVLPVDA 1242
             ++++  G      KS+ VV  P   +++TEEE EYN+LLDGLGPRF +WWGTG+LPVDA
Sbjct: 323  RESET--GSASTSEKSDKVVVKPECSESMTEEEAEYNSLLDGLGPRFVEWWGTGILPVDA 380

Query: 1241 DLLPLTIPGYKTPFRLLPMGMRPRLTNAEMTNLRKLAKSLPCHFALGRNRNHQGLAASII 1062
            DLLP  IPGYKTPFRLLP GMRPRLTNAEMTNLRK+AKSLPCHFALGRNRNHQGLAA+II
Sbjct: 381  DLLPPKIPGYKTPFRLLPAGMRPRLTNAEMTNLRKIAKSLPCHFALGRNRNHQGLAAAII 440

Query: 1061 KLWEKSLIVKIAVKRGIQNTNNKIMSEELKTLTGGVLLLRNKYFIVMYRGKDFLPPTVAS 882
            KLWEKSL+ KIAVKRGIQNTNNK+M+EELK LTGGVLLLRNKYFIV+YRGKDFLP  VA+
Sbjct: 441  KLWEKSLVAKIAVKRGIQNTNNKLMAEELKNLTGGVLLLRNKYFIVIYRGKDFLPTNVAA 500

Query: 881  ALAERQEMTKQIQDVEEKVRGGPVALPVS-EEKG-ALAGTLAEFYEAQARWGTEISAEER 708
            ALAERQ++TKQIQD EEK+R   V    S E+KG A AGTLAEFYEAQARWG +ISAEER
Sbjct: 501  ALAERQDLTKQIQDAEEKLRIKAVEPAQSGEDKGQAPAGTLAEFYEAQARWGRDISAEER 560

Query: 707  EKMIEEASRAKHERVIRRLEHXXXXXXXXXXXXXXXXXKIVASWLPVDPSDDQETITDEE 528
            EKMIEEAS+AKH ++I+R+EH                 KI AS +P  P  DQETITDEE
Sbjct: 561  EKMIEEASKAKHAKLIKRVEHKLAIAQAKKLRAERLLAKIEASMIPAAPDYDQETITDEE 620

Query: 527  RVMFRKVGLRMKPYLPLGIRGVFDGVIENMHLHWKHREVVKLISKEKERAFAEETARLLE 348
            RVMFR+VGLRMKPYLPLG+RGVFDGVIENMHLHWKHRE+VKLISK+K  AF E++ARLLE
Sbjct: 621  RVMFRRVGLRMKPYLPLGVRGVFDGVIENMHLHWKHRELVKLISKQKVLAFVEDSARLLE 680

Query: 347  YESGGILVSIDRVPKGYSLIYYRGKNYRRPITIRPRNLLTKAKALKRRMALQRYEALSQH 168
            YESGGILV+I+RVPKGY+LIYYRGKNYRRPI+IRPRNLLTKAKALKR +A+QR+EAL QH
Sbjct: 681  YESGGILVAIERVPKGYALIYYRGKNYRRPISIRPRNLLTKAKALKRSVAMQRHEALGQH 740

Query: 167  ISEVEQTIEQTKKEIGNTENRENSSAWKSEDHGQ 66
            IS++E TIEQ KKEIG +E+ ++ +   S +HGQ
Sbjct: 741  ISKLENTIEQMKKEIGASEDGDDDNNRGSGEHGQ 774