BLASTX nr result
ID: Perilla23_contig00007871
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Perilla23_contig00007871
(879 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011100935.1| PREDICTED: probable mediator of RNA polymera... 224 9e-56
ref|XP_012853551.1| PREDICTED: probable mediator of RNA polymera... 210 1e-51
ref|XP_011090441.1| PREDICTED: probable mediator of RNA polymera... 208 4e-51
ref|XP_012845224.1| PREDICTED: probable mediator of RNA polymera... 198 4e-48
ref|XP_009613975.1| PREDICTED: probable mediator of RNA polymera... 152 2e-34
ref|XP_009786138.1| PREDICTED: probable mediator of RNA polymera... 151 5e-34
ref|XP_007137683.1| hypothetical protein PHAVU_009G146900g [Phas... 149 4e-33
gb|KOM41130.1| hypothetical protein LR48_Vigan04g132800 [Vigna a... 145 5e-32
gb|KRH53839.1| hypothetical protein GLYMA_06G149200 [Glycine max] 143 1e-31
ref|XP_006370923.1| hypothetical protein POPTR_0019s01790g [Popu... 143 1e-31
ref|XP_006581749.1| PREDICTED: probable mediator of RNA polymera... 143 1e-31
ref|XP_006581748.1| PREDICTED: probable mediator of RNA polymera... 143 1e-31
ref|XP_003526847.1| PREDICTED: probable mediator of RNA polymera... 143 1e-31
ref|XP_011046340.1| PREDICTED: probable mediator of RNA polymera... 140 2e-30
ref|XP_007011110.1| Transcription elongation factor (TFIIS) fami... 140 2e-30
ref|XP_007011109.1| Transcription elongation factor (TFIIS) fami... 140 2e-30
ref|XP_012458766.1| PREDICTED: probable mediator of RNA polymera... 138 5e-30
ref|XP_012458764.1| PREDICTED: probable mediator of RNA polymera... 138 5e-30
ref|XP_012458765.1| PREDICTED: probable mediator of RNA polymera... 138 5e-30
ref|XP_008440997.1| PREDICTED: probable mediator of RNA polymera... 138 5e-30
>ref|XP_011100935.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26c [Sesamum indicum]
Length = 373
Score = 224 bits (570), Expect = 9e-56
Identities = 125/207 (60%), Positives = 135/207 (65%)
Frame = -2
Query: 623 MDPEEFRAILSRSRAGIWAVIEAAIKVAGSDYGDELGRRRDKIVELLYAPEAQLCRNCNG 444
MDPEEFRAILSRS GIWA+IEAAI+VA SDYG+EL RRRDKIVE LYAP AQLCR+CNG
Sbjct: 1 MDPEEFRAILSRSGVGIWAMIEAAIRVASSDYGEELRRRRDKIVESLYAPAAQLCRSCNG 60
Query: 443 NIPSDVVEHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNNRNSTEDLSKS 264
++ +V + N NS ED SKS
Sbjct: 61 DVHQNVAQDEQYYPQNISTVYNNSDDIDNNISKKYNNDDDNN-------NMNSNEDFSKS 113
Query: 263 PLTPXXXXXXXXXXXXXEDVDPYGGLFDDEQTKILAIKEQLEDLNQSEDAVVELLQILAD 84
P TP ED+DPYGGLFDDEQTKI+ IKEQLED NQSEDAVVELLQ LAD
Sbjct: 114 PSTPESNHRDFSGGEAEEDLDPYGGLFDDEQTKIVTIKEQLEDPNQSEDAVVELLQNLAD 173
Query: 83 MDIAFQALKETDIGRHVNRLRKHSSNE 3
MDI FQALKETDIGRHVNRLRKH SNE
Sbjct: 174 MDITFQALKETDIGRHVNRLRKHPSNE 200
>ref|XP_012853551.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26c [Erythranthe guttatus]
gi|604304820|gb|EYU24071.1| hypothetical protein
MIMGU_mgv1a007844mg [Erythranthe guttata]
Length = 393
Score = 210 bits (534), Expect = 1e-51
Identities = 124/216 (57%), Positives = 137/216 (63%), Gaps = 9/216 (4%)
Frame = -2
Query: 623 MDPEEFRAILSRSRAGIWAVIEAAIKVAGSDYGDELGRRRDKIVELLYAPEAQLCRNCNG 444
MDPEEFRAILSRSRAGIW++IE AIKVA SDYGDEL RRRDKIVE LYAP +QLC +CNG
Sbjct: 1 MDPEEFRAILSRSRAGIWSLIETAIKVASSDYGDELRRRRDKIVESLYAPPSQLCDSCNG 60
Query: 443 NIPS------DVVEHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNN---R 291
N + DVV+ +N R
Sbjct: 61 NGNASANQDVDVVQDEPYYPQNVDNSNFNYSDNIDNDNHGNSNSNSNTKKKKLNSNSNIR 120
Query: 290 NSTEDLSKSPLTPXXXXXXXXXXXXXEDVDPYGGLFDDEQTKILAIKEQLEDLNQSEDAV 111
NS E+ S+SPLTP + DPYGGLFDDEQTKI+ IKEQLED +QSEDAV
Sbjct: 121 NSNENFSQSPLTPESNHRNFGAGEE--EEDPYGGLFDDEQTKIITIKEQLEDPDQSEDAV 178
Query: 110 VELLQILADMDIAFQALKETDIGRHVNRLRKHSSNE 3
VELLQ LADMDI FQALKETDIGRHVNRLRK+ SNE
Sbjct: 179 VELLQNLADMDITFQALKETDIGRHVNRLRKYPSNE 214
>ref|XP_011090441.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26c [Sesamum indicum]
Length = 378
Score = 208 bits (530), Expect = 4e-51
Identities = 122/208 (58%), Positives = 128/208 (61%), Gaps = 1/208 (0%)
Frame = -2
Query: 623 MDPEEFRAILSRSRAGIWAVIEAAIKVAGSDYGDELGRRRDKIVELLYAPEAQLCRNCNG 444
MD EE R+ILSRS GIWA+I+AAI VA SDYGDEL RRRD+IVE LYAP AQLCRNCNG
Sbjct: 1 MDSEEIRSILSRSGVGIWALIDAAIGVASSDYGDELRRRRDRIVESLYAPPAQLCRNCNG 60
Query: 443 NIPSDVVEHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNNRNSTEDLSKS 264
+ D + RN ED SKS
Sbjct: 61 GVQDD----GDRDGRFYNRSNNINNSSDDVDNKDDHENKKKFSVDDDKDKRNLNEDFSKS 116
Query: 263 PLTPXXXXXXXXXXXXXE-DVDPYGGLFDDEQTKILAIKEQLEDLNQSEDAVVELLQILA 87
PLTP E DVDPY GLFDDEQTKIL IKEQLED QSEDAVVELLQ LA
Sbjct: 117 PLTPESNHRNSSGGEEEEEDVDPYAGLFDDEQTKILNIKEQLEDPQQSEDAVVELLQTLA 176
Query: 86 DMDIAFQALKETDIGRHVNRLRKHSSNE 3
DMDI FQALKETDIGRHVNRLRKH SNE
Sbjct: 177 DMDITFQALKETDIGRHVNRLRKHPSNE 204
>ref|XP_012845224.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26c [Erythranthe guttatus]
gi|604319969|gb|EYU31133.1| hypothetical protein
MIMGU_mgv1a008128mg [Erythranthe guttata]
Length = 384
Score = 198 bits (504), Expect = 4e-48
Identities = 115/209 (55%), Positives = 127/209 (60%), Gaps = 2/209 (0%)
Frame = -2
Query: 623 MDPEEFRAILSRSRAGIWAVIEAAIKVAGSDYGDELGRRRDKIVELLYAPEAQLCRNCNG 444
MD +EFRAILS S GIWAVI+AAI+VAGSDYGDEL RRRD IVE LYAP QLC NC G
Sbjct: 1 MDSDEFRAILSGSGVGIWAVIDAAIRVAGSDYGDELRRRRDGIVESLYAPAEQLCHNCGG 60
Query: 443 NIPSDV-VEHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNNRNSTEDLSK 267
I D +H NRN ED SK
Sbjct: 61 GINDDGGQDHRLCNRINNNSNIVINSSEDVDDKDDRHDSNKKVAADDGKTNRNLNEDFSK 120
Query: 266 SP-LTPXXXXXXXXXXXXXEDVDPYGGLFDDEQTKILAIKEQLEDLNQSEDAVVELLQIL 90
SP LTP E++DP+ GLFDDEQ+ IL IKEQLED +QS+D+VVELLQ L
Sbjct: 121 SPPLTPESNHRTFSDGDGEEELDPFAGLFDDEQSTILGIKEQLEDPHQSDDSVVELLQTL 180
Query: 89 ADMDIAFQALKETDIGRHVNRLRKHSSNE 3
+DMDI FQALKETDIGRHVNRLRKH S E
Sbjct: 181 SDMDITFQALKETDIGRHVNRLRKHQSGE 209
>ref|XP_009613975.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26c [Nicotiana tomentosiformis]
Length = 352
Score = 152 bits (385), Expect = 2e-34
Identities = 100/214 (46%), Positives = 115/214 (53%), Gaps = 7/214 (3%)
Frame = -2
Query: 623 MDPEEFRAILSRSRAGIWAVIEAAIKVAGSDYGDELGRRRDKIVELLYAPEAQLCRNCNG 444
MD +EFR ILS S+ +W +I+AAI VA D GDEL RRD IVE LY+ CR+CN
Sbjct: 1 MDLDEFRLILSESKVDVWTLIDAAISVASVDCGDELKHRRDGIVEKLYSTR---CRSCN- 56
Query: 443 NIPSDVVEHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNNRNSTEDLSKS 264
DVV RN ++KS
Sbjct: 57 ----DVVN------------------------------GQYSLDNGERVTRNVETVMNKS 82
Query: 263 PLTPXXXXXXXXXXXXXE------DVDPYGGLFDD-EQTKILAIKEQLEDLNQSEDAVVE 105
PLTP + DVDPYGGLFDD EQT+IL IKEQLED S++ V++
Sbjct: 83 PLTPESNHRNNNTSNDNKNDDEEEDVDPYGGLFDDDEQTRILTIKEQLEDPQLSDEDVID 142
Query: 104 LLQILADMDIAFQALKETDIGRHVNRLRKHSSNE 3
LLQ LADMDI FQALKETDIGRHVNRLRKH SNE
Sbjct: 143 LLQSLADMDITFQALKETDIGRHVNRLRKHPSNE 176
>ref|XP_009786138.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26c [Nicotiana sylvestris]
Length = 352
Score = 151 bits (382), Expect = 5e-34
Identities = 98/214 (45%), Positives = 115/214 (53%), Gaps = 7/214 (3%)
Frame = -2
Query: 623 MDPEEFRAILSRSRAGIWAVIEAAIKVAGSDYGDELGRRRDKIVELLYAPEAQLCRNCNG 444
MD +EFR +LS S+ +W +I+AAI VA D GDEL RRD IVE LY+ CR+CN
Sbjct: 1 MDLDEFRLVLSESKVDVWTMIDAAISVASVDCGDELKHRRDGIVEKLYSTR---CRSCN- 56
Query: 443 NIPSDVVEHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNNRNSTEDLSKS 264
DVV RN ++KS
Sbjct: 57 ----DVVN------------------------------GQYSLDNGQTVTRNVETVMNKS 82
Query: 263 PLTPXXXXXXXXXXXXXE------DVDPYGGLFDD-EQTKILAIKEQLEDLNQSEDAVVE 105
P+TP + DVDPYGGLFDD EQT+IL IKEQLED S++ V++
Sbjct: 83 PITPESNHRNNNTSNDNKNDDEEEDVDPYGGLFDDDEQTRILTIKEQLEDPQLSDEDVID 142
Query: 104 LLQILADMDIAFQALKETDIGRHVNRLRKHSSNE 3
LLQ LADMDI FQALKETDIGRHVNRLRKH SNE
Sbjct: 143 LLQSLADMDITFQALKETDIGRHVNRLRKHPSNE 176
>ref|XP_007137683.1| hypothetical protein PHAVU_009G146900g [Phaseolus vulgaris]
gi|561010770|gb|ESW09677.1| hypothetical protein
PHAVU_009G146900g [Phaseolus vulgaris]
Length = 353
Score = 149 bits (375), Expect = 4e-33
Identities = 94/209 (44%), Positives = 111/209 (53%), Gaps = 2/209 (0%)
Frame = -2
Query: 623 MDPEEFRAILSRSRAGIWAVIEAAIKVAGSDYGDELGRRRDKIVELLYAPEAQ--LCRNC 450
MD ++FR+IL S +W I+AAI VA +D EL RRRD IVE LY+ A CRNC
Sbjct: 1 MDLDDFRSILDTSGVDVWMFIDAAIAVASADCAAELKRRRDSIVESLYSATAAPPRCRNC 60
Query: 449 NGNIPSDVVEHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNNRNSTEDLS 270
+ H +R + +
Sbjct: 61 DDGHLLRTNGHQITKQNSPSPSPVRQP------------------------HRRRAAEAA 96
Query: 269 KSPLTPXXXXXXXXXXXXXEDVDPYGGLFDDEQTKILAIKEQLEDLNQSEDAVVELLQIL 90
SP TP D+DPYGGLFDDEQ KIL IKEQLE+ +QSED++VELLQ L
Sbjct: 97 NSPATPQSLENDDGGE----DLDPYGGLFDDEQKKILEIKEQLEEPDQSEDSLVELLQSL 152
Query: 89 ADMDIAFQALKETDIGRHVNRLRKHSSNE 3
ADMDI FQALKETDIGRHVNRLRKH SN+
Sbjct: 153 ADMDITFQALKETDIGRHVNRLRKHPSND 181
>gb|KOM41130.1| hypothetical protein LR48_Vigan04g132800 [Vigna angularis]
Length = 353
Score = 145 bits (365), Expect = 5e-32
Identities = 93/209 (44%), Positives = 109/209 (52%), Gaps = 2/209 (0%)
Frame = -2
Query: 623 MDPEEFRAILSRSRAGIWAVIEAAIKVAGSDYGDELGRRRDKIVELLYAPEAQ--LCRNC 450
MD ++FR+IL S +W I+AAI VA +D EL RRRD IVE LY+ A CRNC
Sbjct: 1 MDLDDFRSILDTSGVDVWMFIDAAIAVASADCAAELKRRRDSIVESLYSATAAPPQCRNC 60
Query: 449 NGNIPSDVVEHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNNRNSTEDLS 270
H R + +
Sbjct: 61 GDGHRLRPNGHQVAKQNSPSPSPERQP------------------------QRRAAAATA 96
Query: 269 KSPLTPXXXXXXXXXXXXXEDVDPYGGLFDDEQTKILAIKEQLEDLNQSEDAVVELLQIL 90
SP TP ++DPYGGLFDDEQ KIL IKEQLE+ +QSED++VELLQ L
Sbjct: 97 NSPATPQSLENDDGGE----ELDPYGGLFDDEQKKILDIKEQLEEPDQSEDSLVELLQSL 152
Query: 89 ADMDIAFQALKETDIGRHVNRLRKHSSNE 3
ADMDI FQALKETDIGRHVNRLRKH SN+
Sbjct: 153 ADMDITFQALKETDIGRHVNRLRKHPSND 181
>gb|KRH53839.1| hypothetical protein GLYMA_06G149200 [Glycine max]
Length = 327
Score = 143 bits (361), Expect = 1e-31
Identities = 93/209 (44%), Positives = 112/209 (53%), Gaps = 2/209 (0%)
Frame = -2
Query: 623 MDPEEFRAILSRSRAGIWAVIEAAIKVAGSDYGDELGRRRDKIVELLYAPEAQL--CRNC 450
MD ++FR++L + +W I+AAI VA +D EL RRRD IVE LYA A CR C
Sbjct: 1 MDLDDFRSVLDTAGVDVWMFIDAAIAVASADSAGELKRRRDGIVERLYAATAATPKCRIC 60
Query: 449 NGNIPSDVVEHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNNRNSTEDLS 270
+ +D+ H R + +
Sbjct: 61 DDG-GNDLNGHQIKKQSSPSPERQPHQ------------------------RRAAAIAAA 95
Query: 269 KSPLTPXXXXXXXXXXXXXEDVDPYGGLFDDEQTKILAIKEQLEDLNQSEDAVVELLQIL 90
SP TP D+DPYGGLFDDEQ KIL IKEQLE+ +QSED++VELLQ L
Sbjct: 96 ASPATPQSLENDNDGEE---DLDPYGGLFDDEQKKILEIKEQLEEPDQSEDSLVELLQSL 152
Query: 89 ADMDIAFQALKETDIGRHVNRLRKHSSNE 3
ADMDI FQALKETDIGRHVNRLRKH SN+
Sbjct: 153 ADMDITFQALKETDIGRHVNRLRKHPSND 181
>ref|XP_006370923.1| hypothetical protein POPTR_0019s01790g [Populus trichocarpa]
gi|550316504|gb|ERP48720.1| hypothetical protein
POPTR_0019s01790g [Populus trichocarpa]
Length = 357
Score = 143 bits (361), Expect = 1e-31
Identities = 87/207 (42%), Positives = 107/207 (51%)
Frame = -2
Query: 623 MDPEEFRAILSRSRAGIWAVIEAAIKVAGSDYGDELGRRRDKIVELLYAPEAQLCRNCNG 444
MD ++FR IL S +W I+ AI VA D+G EL RRRD IVE L+A + C C
Sbjct: 1 MDIDDFRLILESSGVDVWTFIDTAIVVASLDFGSELKRRRDDIVERLFASSSS-CSRCRD 59
Query: 443 NIPSDVVEHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNNRNSTEDLSKS 264
+D+ T + S
Sbjct: 60 RSLNDI---------------------NMNNTSNGDEIKGLVEKESSHEEEKGTRVAADS 98
Query: 263 PLTPXXXXXXXXXXXXXEDVDPYGGLFDDEQTKILAIKEQLEDLNQSEDAVVELLQILAD 84
P+TP ++DPYGGLFDDE KIL IK+QLED++Q ED++V+LLQ LAD
Sbjct: 99 PVTPRSVNGDGDDD----ELDPYGGLFDDEPKKILVIKQQLEDIDQPEDSLVDLLQSLAD 154
Query: 83 MDIAFQALKETDIGRHVNRLRKHSSNE 3
MDI FQALKETDIGRHVNRLRKH SN+
Sbjct: 155 MDITFQALKETDIGRHVNRLRKHPSND 181
>ref|XP_006581749.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26c-like isoform X3 [Glycine max]
gi|947105455|gb|KRH53838.1| hypothetical protein
GLYMA_06G149200 [Glycine max]
Length = 359
Score = 143 bits (361), Expect = 1e-31
Identities = 93/209 (44%), Positives = 112/209 (53%), Gaps = 2/209 (0%)
Frame = -2
Query: 623 MDPEEFRAILSRSRAGIWAVIEAAIKVAGSDYGDELGRRRDKIVELLYAPEAQL--CRNC 450
MD ++FR++L + +W I+AAI VA +D EL RRRD IVE LYA A CR C
Sbjct: 1 MDLDDFRSVLDTAGVDVWMFIDAAIAVASADSAGELKRRRDGIVERLYAATAATPKCRIC 60
Query: 449 NGNIPSDVVEHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNNRNSTEDLS 270
+ +D+ H R + +
Sbjct: 61 DDG-GNDLNGHQIKKQSSPSPERQPHQ------------------------RRAAAIAAA 95
Query: 269 KSPLTPXXXXXXXXXXXXXEDVDPYGGLFDDEQTKILAIKEQLEDLNQSEDAVVELLQIL 90
SP TP D+DPYGGLFDDEQ KIL IKEQLE+ +QSED++VELLQ L
Sbjct: 96 ASPATPQSLENDNDGEE---DLDPYGGLFDDEQKKILEIKEQLEEPDQSEDSLVELLQSL 152
Query: 89 ADMDIAFQALKETDIGRHVNRLRKHSSNE 3
ADMDI FQALKETDIGRHVNRLRKH SN+
Sbjct: 153 ADMDITFQALKETDIGRHVNRLRKHPSND 181
>ref|XP_006581748.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26c-like isoform X2 [Glycine max]
gi|947105454|gb|KRH53837.1| hypothetical protein
GLYMA_06G149200 [Glycine max]
Length = 360
Score = 143 bits (361), Expect = 1e-31
Identities = 93/209 (44%), Positives = 112/209 (53%), Gaps = 2/209 (0%)
Frame = -2
Query: 623 MDPEEFRAILSRSRAGIWAVIEAAIKVAGSDYGDELGRRRDKIVELLYAPEAQL--CRNC 450
MD ++FR++L + +W I+AAI VA +D EL RRRD IVE LYA A CR C
Sbjct: 1 MDLDDFRSVLDTAGVDVWMFIDAAIAVASADSAGELKRRRDGIVERLYAATAATPKCRIC 60
Query: 449 NGNIPSDVVEHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNNRNSTEDLS 270
+ +D+ H R + +
Sbjct: 61 DDG-GNDLNGHQIKKQSSPSPERQPHQ------------------------RRAAAIAAA 95
Query: 269 KSPLTPXXXXXXXXXXXXXEDVDPYGGLFDDEQTKILAIKEQLEDLNQSEDAVVELLQIL 90
SP TP D+DPYGGLFDDEQ KIL IKEQLE+ +QSED++VELLQ L
Sbjct: 96 ASPATPQSLENDNDGEE---DLDPYGGLFDDEQKKILEIKEQLEEPDQSEDSLVELLQSL 152
Query: 89 ADMDIAFQALKETDIGRHVNRLRKHSSNE 3
ADMDI FQALKETDIGRHVNRLRKH SN+
Sbjct: 153 ADMDITFQALKETDIGRHVNRLRKHPSND 181
>ref|XP_003526847.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26c-like isoform X1 [Glycine max]
gi|947105453|gb|KRH53836.1| hypothetical protein
GLYMA_06G149200 [Glycine max]
Length = 361
Score = 143 bits (361), Expect = 1e-31
Identities = 93/209 (44%), Positives = 112/209 (53%), Gaps = 2/209 (0%)
Frame = -2
Query: 623 MDPEEFRAILSRSRAGIWAVIEAAIKVAGSDYGDELGRRRDKIVELLYAPEAQL--CRNC 450
MD ++FR++L + +W I+AAI VA +D EL RRRD IVE LYA A CR C
Sbjct: 1 MDLDDFRSVLDTAGVDVWMFIDAAIAVASADSAGELKRRRDGIVERLYAATAATPKCRIC 60
Query: 449 NGNIPSDVVEHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNNRNSTEDLS 270
+ +D+ H R + +
Sbjct: 61 DDG-GNDLNGHQIKKQSSPSPERQPHQ------------------------RRAAAIAAA 95
Query: 269 KSPLTPXXXXXXXXXXXXXEDVDPYGGLFDDEQTKILAIKEQLEDLNQSEDAVVELLQIL 90
SP TP D+DPYGGLFDDEQ KIL IKEQLE+ +QSED++VELLQ L
Sbjct: 96 ASPATPQSLENDNDGEE---DLDPYGGLFDDEQKKILEIKEQLEEPDQSEDSLVELLQSL 152
Query: 89 ADMDIAFQALKETDIGRHVNRLRKHSSNE 3
ADMDI FQALKETDIGRHVNRLRKH SN+
Sbjct: 153 ADMDITFQALKETDIGRHVNRLRKHPSND 181
>ref|XP_011046340.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26c [Populus euphratica]
Length = 360
Score = 140 bits (352), Expect = 2e-30
Identities = 88/207 (42%), Positives = 108/207 (52%)
Frame = -2
Query: 623 MDPEEFRAILSRSRAGIWAVIEAAIKVAGSDYGDELGRRRDKIVELLYAPEAQLCRNCNG 444
MD ++FR+IL S +W I+ AI VA D+G EL RRR+ IVE L+A + C C
Sbjct: 1 MDIDDFRSILESSGVDVWTFIDTAIVVASLDFGSELKRRRNDIVERLFASSSS-CSRCRD 59
Query: 443 NIPSDVVEHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNNRNSTEDLSKS 264
+D+ R T D S
Sbjct: 60 RSLNDI------------------NMNNTSNGDEIKGLVEKESSHEEEKGRRVTAD---S 98
Query: 263 PLTPXXXXXXXXXXXXXEDVDPYGGLFDDEQTKILAIKEQLEDLNQSEDAVVELLQILAD 84
P+TP + DPYGGLFDDE KIL IK+QLED++Q ED++V+LLQ LAD
Sbjct: 99 PVTPRSVNGDGDD-----EFDPYGGLFDDEPKKILDIKQQLEDIDQPEDSLVDLLQSLAD 153
Query: 83 MDIAFQALKETDIGRHVNRLRKHSSNE 3
MDI FQALKETDIGRHVNRLRKH SN+
Sbjct: 154 MDITFQALKETDIGRHVNRLRKHPSND 180
>ref|XP_007011110.1| Transcription elongation factor (TFIIS) family protein, putative
isoform 2, partial [Theobroma cacao]
gi|508728023|gb|EOY19920.1| Transcription elongation
factor (TFIIS) family protein, putative isoform 2,
partial [Theobroma cacao]
Length = 300
Score = 140 bits (352), Expect = 2e-30
Identities = 87/208 (41%), Positives = 112/208 (53%), Gaps = 1/208 (0%)
Frame = -2
Query: 623 MDPEEFRAILSRSRAGIWAVIEAAIKVAGSDYGDELGRRRDKIVELLYAPE-AQLCRNCN 447
MD ++FR++L + +W I++AI VA DYG EL +RRD IVE LYA C++C+
Sbjct: 1 MDLDDFRSVLETAGVDVWTFIDSAILVASLDYGQELKQRRDGIVERLYATSMVTRCKSCD 60
Query: 446 GNIPSDVVEHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNNRNSTEDLSK 267
S+ + N E +
Sbjct: 61 FGERSNGYQ---------------------------------VNKEGSPNEGKGGEGGRE 87
Query: 266 SPLTPXXXXXXXXXXXXXEDVDPYGGLFDDEQTKILAIKEQLEDLNQSEDAVVELLQILA 87
SP TP D+DPYGGLFDDEQ ++L IKE LE+ +QSED++V+LLQ LA
Sbjct: 88 SPFTPQSDNEDG-------DLDPYGGLFDDEQKRVLEIKESLEEPDQSEDSLVDLLQSLA 140
Query: 86 DMDIAFQALKETDIGRHVNRLRKHSSNE 3
DMDI FQALKETDIGRHVN+LRKHSSN+
Sbjct: 141 DMDITFQALKETDIGRHVNKLRKHSSND 168
>ref|XP_007011109.1| Transcription elongation factor (TFIIS) family protein, putative
isoform 1 [Theobroma cacao] gi|508728022|gb|EOY19919.1|
Transcription elongation factor (TFIIS) family protein,
putative isoform 1 [Theobroma cacao]
Length = 337
Score = 140 bits (352), Expect = 2e-30
Identities = 87/208 (41%), Positives = 112/208 (53%), Gaps = 1/208 (0%)
Frame = -2
Query: 623 MDPEEFRAILSRSRAGIWAVIEAAIKVAGSDYGDELGRRRDKIVELLYAPE-AQLCRNCN 447
MD ++FR++L + +W I++AI VA DYG EL +RRD IVE LYA C++C+
Sbjct: 1 MDLDDFRSVLETAGVDVWTFIDSAILVASLDYGQELKQRRDGIVERLYATSMVTRCKSCD 60
Query: 446 GNIPSDVVEHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNNRNSTEDLSK 267
S+ + N E +
Sbjct: 61 FGERSNGYQ---------------------------------VNKEGSPNEGKGGEGGRE 87
Query: 266 SPLTPXXXXXXXXXXXXXEDVDPYGGLFDDEQTKILAIKEQLEDLNQSEDAVVELLQILA 87
SP TP D+DPYGGLFDDEQ ++L IKE LE+ +QSED++V+LLQ LA
Sbjct: 88 SPFTPQSDNEDG-------DLDPYGGLFDDEQKRVLEIKESLEEPDQSEDSLVDLLQSLA 140
Query: 86 DMDIAFQALKETDIGRHVNRLRKHSSNE 3
DMDI FQALKETDIGRHVN+LRKHSSN+
Sbjct: 141 DMDITFQALKETDIGRHVNKLRKHSSND 168
>ref|XP_012458766.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26c isoform X3 [Gossypium raimondii]
Length = 274
Score = 138 bits (348), Expect = 5e-30
Identities = 86/208 (41%), Positives = 110/208 (52%), Gaps = 1/208 (0%)
Frame = -2
Query: 623 MDPEEFRAILSRSRAGIWAVIEAAIKVAGSDYGDELGRRRDKIVELLYAPE-AQLCRNCN 447
MD ++FR++L + +W I+ AI VA DYG E +RRD IVE LYA C++C+
Sbjct: 1 MDLDDFRSVLETAGVDVWTFIDTAILVASLDYGQEFKQRRDGIVERLYATSMVTRCKSCD 60
Query: 446 GNIPSDVVEHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNNRNSTEDLSK 267
S+V + + E
Sbjct: 61 FGERSNVYQ-----------------------------------VNKEDSPHEGKEGGKG 85
Query: 266 SPLTPXXXXXXXXXXXXXEDVDPYGGLFDDEQTKILAIKEQLEDLNQSEDAVVELLQILA 87
SP TP D+DPYGGLFDDEQ ++L IKE+LE +QSED++V+LLQ LA
Sbjct: 86 SPFTPHSDNEDD-------DMDPYGGLFDDEQKRVLEIKERLELPDQSEDSLVDLLQSLA 138
Query: 86 DMDIAFQALKETDIGRHVNRLRKHSSNE 3
DMDI FQALKETDIGRHVN+LRKHSSN+
Sbjct: 139 DMDITFQALKETDIGRHVNKLRKHSSND 166
>ref|XP_012458764.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26c isoform X1 [Gossypium raimondii]
Length = 337
Score = 138 bits (348), Expect = 5e-30
Identities = 86/208 (41%), Positives = 110/208 (52%), Gaps = 1/208 (0%)
Frame = -2
Query: 623 MDPEEFRAILSRSRAGIWAVIEAAIKVAGSDYGDELGRRRDKIVELLYAPE-AQLCRNCN 447
MD ++FR++L + +W I+ AI VA DYG E +RRD IVE LYA C++C+
Sbjct: 1 MDLDDFRSVLETAGVDVWTFIDTAILVASLDYGQEFKQRRDGIVERLYATSMVTRCKSCD 60
Query: 446 GNIPSDVVEHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNNRNSTEDLSK 267
S+V + + E
Sbjct: 61 FGERSNVYQ-----------------------------------VNKEDSPHEGKEGGKG 85
Query: 266 SPLTPXXXXXXXXXXXXXEDVDPYGGLFDDEQTKILAIKEQLEDLNQSEDAVVELLQILA 87
SP TP D+DPYGGLFDDEQ ++L IKE+LE +QSED++V+LLQ LA
Sbjct: 86 SPFTPHSDNEDD-------DMDPYGGLFDDEQKRVLEIKERLELPDQSEDSLVDLLQSLA 138
Query: 86 DMDIAFQALKETDIGRHVNRLRKHSSNE 3
DMDI FQALKETDIGRHVN+LRKHSSN+
Sbjct: 139 DMDITFQALKETDIGRHVNKLRKHSSND 166
>ref|XP_012458765.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26c isoform X2 [Gossypium raimondii]
gi|763808077|gb|KJB74979.1| hypothetical protein
B456_012G017100 [Gossypium raimondii]
Length = 336
Score = 138 bits (348), Expect = 5e-30
Identities = 86/208 (41%), Positives = 110/208 (52%), Gaps = 1/208 (0%)
Frame = -2
Query: 623 MDPEEFRAILSRSRAGIWAVIEAAIKVAGSDYGDELGRRRDKIVELLYAPE-AQLCRNCN 447
MD ++FR++L + +W I+ AI VA DYG E +RRD IVE LYA C++C+
Sbjct: 1 MDLDDFRSVLETAGVDVWTFIDTAILVASLDYGQEFKQRRDGIVERLYATSMVTRCKSCD 60
Query: 446 GNIPSDVVEHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNNRNSTEDLSK 267
S+V + + E
Sbjct: 61 FGERSNVYQ-----------------------------------VNKEDSPHEGKEGGKG 85
Query: 266 SPLTPXXXXXXXXXXXXXEDVDPYGGLFDDEQTKILAIKEQLEDLNQSEDAVVELLQILA 87
SP TP D+DPYGGLFDDEQ ++L IKE+LE +QSED++V+LLQ LA
Sbjct: 86 SPFTPHSDNEDD-------DMDPYGGLFDDEQKRVLEIKERLELPDQSEDSLVDLLQSLA 138
Query: 86 DMDIAFQALKETDIGRHVNRLRKHSSNE 3
DMDI FQALKETDIGRHVN+LRKHSSN+
Sbjct: 139 DMDITFQALKETDIGRHVNKLRKHSSND 166
>ref|XP_008440997.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26c [Cucumis melo]
Length = 345
Score = 138 bits (348), Expect = 5e-30
Identities = 89/209 (42%), Positives = 107/209 (51%), Gaps = 2/209 (0%)
Frame = -2
Query: 623 MDPEEFRAILSRSRAGIWAVIEAAIKVAGSDYGDELGRRRDKIVELLYAPEA--QLCRNC 450
+D ++FR IL + +W I+ A++VA DYG++L RRD IVE LYA + CRNC
Sbjct: 4 LDLDDFRTILDTAGVDVWTFIDTAMEVASLDYGNQLKNRRDGIVERLYALTSPPSRCRNC 63
Query: 449 NGNIPSDVVEHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNNRNSTEDLS 270
+ + D + S E
Sbjct: 64 DTDRNHD------------------------------------GRSNGCEIKQGSGEVKG 87
Query: 269 KSPLTPXXXXXXXXXXXXXEDVDPYGGLFDDEQTKILAIKEQLEDLNQSEDAVVELLQIL 90
SP TP DPY GLFDDEQ K+L IKEQLE +Q EDA+VELLQ L
Sbjct: 88 ASPSTPQFVVVEGDDDG----ADPYAGLFDDEQKKVLEIKEQLEIPHQPEDALVELLQNL 143
Query: 89 ADMDIAFQALKETDIGRHVNRLRKHSSNE 3
ADMDI FQALKETDIGRHVNRLRKHSSN+
Sbjct: 144 ADMDITFQALKETDIGRHVNRLRKHSSND 172