BLASTX nr result
ID: Perilla23_contig00007528
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Perilla23_contig00007528
(2906 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011093631.1| PREDICTED: DNA topoisomerase 1-like [Sesamum... 1318 0.0
ref|XP_012845487.1| PREDICTED: DNA topoisomerase 1-like [Erythra... 1196 0.0
gb|EYU30724.1| hypothetical protein MIMGU_mgv1a001121mg [Erythra... 1194 0.0
emb|CDP13767.1| unnamed protein product [Coffea canephora] 1115 0.0
dbj|BAG31377.1| topoisomerase I [Catharanthus roseus] 1111 0.0
dbj|BAG31376.1| topoisomerase I [Camptotheca acuminata] 1102 0.0
dbj|BAK32960.1| topoisomerase I [Ophiorrhiza pseudofasciculata] 1102 0.0
dbj|BAG31375.1| topoisomerase I [Ophiorrhiza japonica] 1093 0.0
dbj|BAK32962.1| topoisomerase I [Ophiorrhiza trichocarpon var. g... 1090 0.0
dbj|BAK32958.1| topoisomerase I [Ophiorrhiza pedunculata] 1089 0.0
ref|XP_009619726.1| PREDICTED: LOW QUALITY PROTEIN: DNA topoisom... 1084 0.0
ref|XP_009790344.1| PREDICTED: LOW QUALITY PROTEIN: DNA topoisom... 1081 0.0
dbj|BAG31373.1| topoisomerase I [Ophiorrhiza pumila] 1072 0.0
dbj|BAG31374.1| topoisomerase I [Ophiorrhiza liukiuensis] 1071 0.0
dbj|BAK32956.1| topoisomerase I [Ophiorrhiza fucosa] 1069 0.0
gb|KHG20024.1| DNA topoisomerase 1 -like protein [Gossypium arbo... 1068 0.0
dbj|BAK32961.1| topoisomerase I [Ophiorrhiza ridleyana] 1068 0.0
ref|XP_012443903.1| PREDICTED: DNA topoisomerase 1-like [Gossypi... 1058 0.0
ref|XP_006364175.1| PREDICTED: LOW QUALITY PROTEIN: DNA topoisom... 1057 0.0
dbj|BAK32963.1| topoisomerase I [Ophiorrhiza sp. 35] 1056 0.0
>ref|XP_011093631.1| PREDICTED: DNA topoisomerase 1-like [Sesamum indicum]
Length = 893
Score = 1318 bits (3412), Expect = 0.0
Identities = 675/893 (75%), Positives = 724/893 (81%), Gaps = 1/893 (0%)
Frame = -2
Query: 2755 MAVEAYXXXXXXXXXXXXXEPLVFXXXXXXXXXXXXXXXXXXSVPQKHEQQSGRPASDVR 2576
MA+E+ EPLVF + QKH++ RP+ DVR
Sbjct: 1 MAIESCNDQKLMDDMDEDDEPLVFKRSSSSAKQSQGNSETKRPLSQKHDRPLNRPSPDVR 60
Query: 2575 PQNGQNNFVQKSKMVPSSKTP-LDRXXXXXXXXXXXXXXXXXXXSMVDSKPSTSMTNESN 2399
PQNGQ+ +QKSK VPSS+TP L VD +PSTS+T+ESN
Sbjct: 61 PQNGQSTMIQKSKTVPSSRTPPLRSPLASPKSSNSSAKALAVRPREVDPRPSTSVTDESN 120
Query: 2398 SVKRQIKGESVLNETTPGPNEDLEDSEDDKPLSARLLAGQPKVNSGNANKVANASNFGQK 2219
SVK QIK E + T G NED EDSEDDKPLSARL AG KVNS +ANK NA QK
Sbjct: 121 SVKHQIKDEKPSTKATGGLNEDSEDSEDDKPLSARLPAGLSKVNSNHANKGPNALTSVQK 180
Query: 2218 SKIPKSEDSDDEMPLSSKFRVKSNAGDPTHRSSTSGEKKPLLAECRQNGSASMERKPSTV 2039
+KIPK EDSDDE+PLSSKF+VKSNAG+ T+R S SGE+KPLLA+ QNGSAS ERKPST+
Sbjct: 181 TKIPKPEDSDDEIPLSSKFQVKSNAGESTNRPSISGERKPLLAKYDQNGSASAERKPSTI 240
Query: 2038 LKKRIGDSVKPADGSYLKKPKLSETSTLHKNKESSVISEMKEEDDEDHVPISQRMKKTAS 1859
LKKR D VK A SYLKKPKLS+ ST +K KE+S+ EMK+EDDEDHVPISQR+K+ S
Sbjct: 241 LKKRPADGVKSAGESYLKKPKLSDASTPNKTKETSIKDEMKDEDDEDHVPISQRIKQQTS 300
Query: 1858 SDKKSTPVKKMTKPTPVITXXXXXXXXXXXXXXKYSGSSKVPPSSGEGQKWTTLVHNGVI 1679
SDKKS+ K MTKP KYS SSKVPPSSGEGQKWTTLVHNGVI
Sbjct: 301 SDKKSSSAKNMTKPISASAKKTSKKPKKVMKNSKYSKSSKVPPSSGEGQKWTTLVHNGVI 360
Query: 1678 FPPPYKPHGVKMLYKGKPVDLTPEQEEVATMYAVMLETEYMNKPKFKENFMSDWRKILGR 1499
FPPPYKPHGVKMLYKGKPVDLTPEQEEVATMYAVML+T+YMNKPKFKENFM+DWRKILG+
Sbjct: 361 FPPPYKPHGVKMLYKGKPVDLTPEQEEVATMYAVMLDTDYMNKPKFKENFMADWRKILGK 420
Query: 1498 NHVIQSLEHCDFTPIFEWHXXXXXXXXXXXXXXXXXXXXXXXXXXXKYMWAILDGVKEKV 1319
NHVIQSLEHCDFTPI+EWH KYMWAI++GVKEKV
Sbjct: 421 NHVIQSLEHCDFTPIYEWHQKEKEKKKQMTAEEKKALKEEKLKQEEKYMWAIVNGVKEKV 480
Query: 1318 GNFRVEPPGLFRGRGEHPKMGKLKKRIRPSDITINIGKDAPIPECPISGESWKEIRHDNT 1139
GNFRVEPPGLFRGRGEHPKMGKLKKRIRPSDITINIGKDAPIPECPI GESWKEIRHDNT
Sbjct: 481 GNFRVEPPGLFRGRGEHPKMGKLKKRIRPSDITINIGKDAPIPECPIPGESWKEIRHDNT 540
Query: 1138 VTWLAFWNDPINPKEFKYVFLAASSTLKGQSDKEKYEKARLLKDYIQGIRTAYTRDFTSN 959
VTWLA+WNDPINPKEFKYVFLAASSTLKGQSDKEKYEKARLLKDYI GIR AYT+DFT+
Sbjct: 541 VTWLAYWNDPINPKEFKYVFLAASSTLKGQSDKEKYEKARLLKDYIHGIRAAYTKDFTNK 600
Query: 958 DPTKKQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPNILKFDFLGKDS 779
DPTKKQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPNILKFDFLGKDS
Sbjct: 601 DPTKKQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPNILKFDFLGKDS 660
Query: 778 IRYQNEVEVEIAVFKAIQQFRSRKKGGDDIFDKLDTSKLNAHLKELMPGLTAKVFRTYNA 599
IRYQNEVEVE VFKAIQQFRS KKG DD+FD+LDTSKLNAHLKELMPGLTAKVFRTYNA
Sbjct: 661 IRYQNEVEVETPVFKAIQQFRSGKKGSDDMFDRLDTSKLNAHLKELMPGLTAKVFRTYNA 720
Query: 598 SITLDDMLSRETKGGDIAQNVVVYQHANKEVAIICNHQRTVSKSHSAQMSRLNEKIDELK 419
SITLDD LSRETKGGD+A+ VVVYQHANKEVAIICNHQRTVSKSHSAQM+RLNEKI+ELK
Sbjct: 721 SITLDDKLSRETKGGDVAEKVVVYQHANKEVAIICNHQRTVSKSHSAQMTRLNEKIEELK 780
Query: 418 GVIEELRTDLARAKKGKPPLKSADGKPKRNLNPDALEKKIAQTTVKIEKMERDKETKEDL 239
GV+EEL+TDLARAKKGKPPLKSADGKPKRNLNPDALEKKIAQT KIEKMERDKETKEDL
Sbjct: 781 GVLEELQTDLARAKKGKPPLKSADGKPKRNLNPDALEKKIAQTNAKIEKMERDKETKEDL 840
Query: 238 KTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMDVEPGFRF 80
KTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMDV+P FRF
Sbjct: 841 KTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMDVDPSFRF 893
>ref|XP_012845487.1| PREDICTED: DNA topoisomerase 1-like [Erythranthe guttatus]
Length = 894
Score = 1196 bits (3094), Expect = 0.0
Identities = 623/863 (72%), Positives = 680/863 (78%), Gaps = 16/863 (1%)
Frame = -2
Query: 2620 QKHEQQSGRPASDVRPQNGQNNFVQKSKMVPSS---KTPLDRXXXXXXXXXXXXXXXXXX 2450
QKH Q GR +SDVRPQNG N QK K V SS K P+
Sbjct: 46 QKHNAQVGRQSSDVRPQNGTNANAQKGKSVTSSSSMKPPVRPSLVSPKSSNSSVKASPIK 105
Query: 2449 XSMVDSKPSTSMTNESNSVKRQIKGESVLNETTPGPNEDLEDSEDDKPLSARLLAGQPKV 2270
V+SKPSTS+ ES SVK IK E+ EDSEDDKPLSAR +AG K
Sbjct: 106 SPDVNSKPSTSVVGESKSVKSTIK------------EENSEDSEDDKPLSARQVAGSSKN 153
Query: 2269 NSGNANKVANASNFGQKSKIPKSEDSDDEMPLSSKFRVKSNAGDPTHRSSTSGEKKPLLA 2090
N NK NA N G+KS +PK EDSDDE+PLS+KF+ KSNAG T RSS S EKKPL+A
Sbjct: 154 NPNQTNK-PNAPNLGKKSNVPKPEDSDDEIPLSAKFQGKSNAGASTSRSSHSEEKKPLVA 212
Query: 2089 -ECRQNGSASMERKPSTVLKKRIGDSVKPADGSYLKKPKLSETSTLHKNKESSVISEMKE 1913
+ +NGSAS ERKPSTVL+KR D V A S LKKPKLS+ S K+K++SV E+K
Sbjct: 213 RKPDKNGSASTERKPSTVLQKRPADGVASAGQSNLKKPKLSD-SLASKDKKASVKPEVKA 271
Query: 1912 EDDEDHVPISQRMKKTASSDKKSTPVKKMTKPTPVITXXXXXXXXXXXXXXK-------- 1757
EDDED VP+SQR KK+ + +KK +P K+TK T I+
Sbjct: 272 EDDEDLVPLSQRTKKSTTPEKKPSPALKVTKSTASISKKTNNKTNSKTNSKTNKKSKQVS 331
Query: 1756 ----YSGSSKVPPSSGEGQKWTTLVHNGVIFPPPYKPHGVKMLYKGKPVDLTPEQEEVAT 1589
YS SSK+PPSSG+GQKWTTLVHNGVIFPPPYKPHGVKMLYKGKPV+LTPEQEEVAT
Sbjct: 332 KDNNYSKSSKLPPSSGDGQKWTTLVHNGVIFPPPYKPHGVKMLYKGKPVNLTPEQEEVAT 391
Query: 1588 MYAVMLETEYMNKPKFKENFMSDWRKILGRNHVIQSLEHCDFTPIFEWHXXXXXXXXXXX 1409
MYAVMLET+Y+ KP+FKENFM+DW+KILG+NHVIQSLEHCDFTPI+EWH
Sbjct: 392 MYAVMLETDYLKKPQFKENFMTDWKKILGKNHVIQSLEHCDFTPIYEWHQREKEKKKQMS 451
Query: 1408 XXXXXXXXXXXXXXXXKYMWAILDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPS 1229
KYMWA+LDGV+EKVGNFRVEPPGLFRGRGEHPKMGKLK+RIRPS
Sbjct: 452 TDEKKALKEEKLKLEEKYMWAVLDGVREKVGNFRVEPPGLFRGRGEHPKMGKLKRRIRPS 511
Query: 1228 DITINIGKDAPIPECPISGESWKEIRHDNTVTWLAFWNDPINPKEFKYVFLAASSTLKGQ 1049
DITINIG+DAPIPECPI GE WKEIRHDNTVTWLA+W+DPIN KEFKYVFLAASSTLKGQ
Sbjct: 512 DITINIGRDAPIPECPIEGERWKEIRHDNTVTWLAYWSDPINGKEFKYVFLAASSTLKGQ 571
Query: 1048 SDKEKYEKARLLKDYIQGIRTAYTRDFTSNDPTKKQIAVATYLIDKLALRAGNEKDDDEA 869
SDKEKYEKARLLKDYIQGIRTAYTRDF S DP KKQIAVATYLIDKLALRAGNEKDDDEA
Sbjct: 572 SDKEKYEKARLLKDYIQGIRTAYTRDFVSKDPAKKQIAVATYLIDKLALRAGNEKDDDEA 631
Query: 868 DTVGCCTLKVENVEPVPPNILKFDFLGKDSIRYQNEVEVEIAVFKAIQQFRSRKKGGDDI 689
DTVGCCTLKVENVEPVPPNILKFDFLGKDSIRYQNEVEVE AVFKAIQQFRS KKGGDD+
Sbjct: 632 DTVGCCTLKVENVEPVPPNILKFDFLGKDSIRYQNEVEVETAVFKAIQQFRSGKKGGDDL 691
Query: 688 FDKLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDMLSRETKGGDIAQNVVVYQHANKE 509
FDKLDTSKLNAHLKELMPGLTAKVFRTYNASITLDD LSRETKGGD+A+ VV Y HANKE
Sbjct: 692 FDKLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDKLSRETKGGDLAEKVVTYNHANKE 751
Query: 508 VAIICNHQRTVSKSHSAQMSRLNEKIDELKGVIEELRTDLARAKKGKPPLKSADGKPKRN 329
VAIICNHQRTVSK+HSAQM RL+EKIDELKGV+EEL+TDL RA+KGKP L ADGK KRN
Sbjct: 752 VAIICNHQRTVSKTHSAQMLRLDEKIDELKGVLEELKTDLGRARKGKPLLAGADGKAKRN 811
Query: 328 LNPDALEKKIAQTTVKIEKMERDKETKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIE 149
+NP+ALE+KIAQTT KIEKMERDKETKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIE
Sbjct: 812 INPEALERKIAQTTAKIEKMERDKETKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIE 871
Query: 148 KIFNKSLLAKFAWAMDVEPGFRF 80
K+FNKSLL KF+WAMDV+P FRF
Sbjct: 872 KMFNKSLLEKFSWAMDVDPSFRF 894
>gb|EYU30724.1| hypothetical protein MIMGU_mgv1a001121mg [Erythranthe guttata]
Length = 883
Score = 1194 bits (3089), Expect = 0.0
Identities = 621/852 (72%), Positives = 676/852 (79%), Gaps = 5/852 (0%)
Frame = -2
Query: 2620 QKHEQQSGRPASDVRPQNGQNNFVQKSKMVPSS---KTPLDRXXXXXXXXXXXXXXXXXX 2450
QKH Q GR +SDVRPQNG N QK K V SS K P+
Sbjct: 46 QKHNAQVGRQSSDVRPQNGTNANAQKGKSVTSSSSMKPPVRPSLVSPKSSNSSVKASPIK 105
Query: 2449 XSMVDSKPSTSMTNESNSVKRQIKGESVLNETTPGPNEDLEDSEDDKPLSARLLAGQPKV 2270
V+SKPSTS+ ES SVK IK E+ EDSEDDKPLSAR +AG K
Sbjct: 106 SPDVNSKPSTSVVGESKSVKSTIK------------EENSEDSEDDKPLSARQVAGSSKN 153
Query: 2269 NSGNANKVANASNFGQKSKIPKSEDSDDEMPLSSKFRVKSNAGDPTHRSSTSGEKKPLLA 2090
N NK NA N G+KS +PK EDSDDE+PLS+KF+ KSNAG T RSS S EKKPL+A
Sbjct: 154 NPNQTNK-PNAPNLGKKSNVPKPEDSDDEIPLSAKFQGKSNAGASTSRSSHSEEKKPLVA 212
Query: 2089 -ECRQNGSASMERKPSTVLKKRIGDSVKPADGSYLKKPKLSETSTLHKNKESSVISEMKE 1913
+ +NGSAS ERKPSTVL+KR D V A S LKKPKLS+ S K+K++SV E+K
Sbjct: 213 RKPDKNGSASTERKPSTVLQKRPADGVASAGQSNLKKPKLSD-SLASKDKKASVKPEVKA 271
Query: 1912 EDDEDHVPISQRMKKTASSDKKSTPVKKMTKPTPVITXXXXXXXXXXXXXXK-YSGSSKV 1736
EDDED VP+SQR KK+ + +KK +P K T T YS SSK+
Sbjct: 272 EDDEDLVPLSQRTKKSTTPEKKPSPALKTNNKTNSKTNSKTNKKSKQVSKDNNYSKSSKL 331
Query: 1735 PPSSGEGQKWTTLVHNGVIFPPPYKPHGVKMLYKGKPVDLTPEQEEVATMYAVMLETEYM 1556
PPSSG+GQKWTTLVHNGVIFPPPYKPHGVKMLYKGKPV+LTPEQEEVATMYAVMLET+Y+
Sbjct: 332 PPSSGDGQKWTTLVHNGVIFPPPYKPHGVKMLYKGKPVNLTPEQEEVATMYAVMLETDYL 391
Query: 1555 NKPKFKENFMSDWRKILGRNHVIQSLEHCDFTPIFEWHXXXXXXXXXXXXXXXXXXXXXX 1376
KP+FKENFM+DW+KILG+NHVIQSLEHCDFTPI+EWH
Sbjct: 392 KKPQFKENFMTDWKKILGKNHVIQSLEHCDFTPIYEWHQREKEKKKQMSTDEKKALKEEK 451
Query: 1375 XXXXXKYMWAILDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPSDITINIGKDAP 1196
KYMWA+LDGV+EKVGNFRVEPPGLFRGRGEHPKMGKLK+RIRPSDITINIG+DAP
Sbjct: 452 LKLEEKYMWAVLDGVREKVGNFRVEPPGLFRGRGEHPKMGKLKRRIRPSDITINIGRDAP 511
Query: 1195 IPECPISGESWKEIRHDNTVTWLAFWNDPINPKEFKYVFLAASSTLKGQSDKEKYEKARL 1016
IPECPI GE WKEIRHDNTVTWLA+W+DPIN KEFKYVFLAASSTLKGQSDKEKYEKARL
Sbjct: 512 IPECPIEGERWKEIRHDNTVTWLAYWSDPINGKEFKYVFLAASSTLKGQSDKEKYEKARL 571
Query: 1015 LKDYIQGIRTAYTRDFTSNDPTKKQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVE 836
LKDYIQGIRTAYTRDF S DP KKQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVE
Sbjct: 572 LKDYIQGIRTAYTRDFVSKDPAKKQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVE 631
Query: 835 NVEPVPPNILKFDFLGKDSIRYQNEVEVEIAVFKAIQQFRSRKKGGDDIFDKLDTSKLNA 656
NVEPVPPNILKFDFLGKDSIRYQNEVEVE AVFKAIQQFRS KKGGDD+FDKLDTSKLNA
Sbjct: 632 NVEPVPPNILKFDFLGKDSIRYQNEVEVETAVFKAIQQFRSGKKGGDDLFDKLDTSKLNA 691
Query: 655 HLKELMPGLTAKVFRTYNASITLDDMLSRETKGGDIAQNVVVYQHANKEVAIICNHQRTV 476
HLKELMPGLTAKVFRTYNASITLDD LSRETKGGD+A+ VV Y HANKEVAIICNHQRTV
Sbjct: 692 HLKELMPGLTAKVFRTYNASITLDDKLSRETKGGDLAEKVVTYNHANKEVAIICNHQRTV 751
Query: 475 SKSHSAQMSRLNEKIDELKGVIEELRTDLARAKKGKPPLKSADGKPKRNLNPDALEKKIA 296
SK+HSAQM RL+EKIDELKGV+EEL+TDL RA+KGKP L ADGK KRN+NP+ALE+KIA
Sbjct: 752 SKTHSAQMLRLDEKIDELKGVLEELKTDLGRARKGKPLLAGADGKAKRNINPEALERKIA 811
Query: 295 QTTVKIEKMERDKETKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKF 116
QTT KIEKMERDKETKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEK+FNKSLL KF
Sbjct: 812 QTTAKIEKMERDKETKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKMFNKSLLEKF 871
Query: 115 AWAMDVEPGFRF 80
+WAMDV+P FRF
Sbjct: 872 SWAMDVDPSFRF 883
>emb|CDP13767.1| unnamed protein product [Coffea canephora]
Length = 926
Score = 1115 bits (2885), Expect = 0.0
Identities = 596/932 (63%), Positives = 672/932 (72%), Gaps = 40/932 (4%)
Frame = -2
Query: 2755 MAVEAYXXXXXXXXXXXXXEPLVFXXXXXXXXXXXXXXXXXXSVPQKHEQQSGRPASDVR 2576
MAVEA PLVF QK + QS R +SDV
Sbjct: 1 MAVEACSTPSLLEDSDEENAPLVFKRTSSSSKQNLSNSETKKLSSQKRDGQSSRNSSDVC 60
Query: 2575 PQNGQNNFVQKSKMVPSSKTPLDRXXXXXXXXXXXXXXXXXXXSM-VDSKPSTS------ 2417
P NGQ++ Q ++V S+KTP + S +SKPS+S
Sbjct: 61 PVNGQSSSAQTGRVVSSAKTPPAKSPLSSPKAANISAKTSLITSPGANSKPSSSTSATVK 120
Query: 2416 -MTNESNSVKRQIKGESVLN---ETTPGPNEDLEDSEDDKPLSARLLAGQPKVNSGNANK 2249
+ N NS ++ SV +TP EDS+DDKPL A+L +G + + NK
Sbjct: 121 QLENHKNSPVVKLPKRSVSAAKLSSTP------EDSDDDKPLMAKLPSGSSRAIVNHGNK 174
Query: 2248 VANASNFGQKSKIPKSEDSDDEMPLSSKFRVKSNAGDPTHRSSTSGEKKPLLAECRQNGS 2069
+ S+ QK + + EDSDDE PLSS++ KSN + +S GEKK L A+ +QNGS
Sbjct: 175 DGDGSSLVQKPGVEEDEDSDDEKPLSSRYLSKSNLVESISKSRNPGEKKSLPAKVQQNGS 234
Query: 2068 ASMER---KPSTVLKKRIGDSVKPADGSYLKKPKLSETSTLHKNKESSVISEMKEEDDED 1898
A + K S++ KR VK +D S +KKPKLS + K++++ +E K EDD+D
Sbjct: 235 ALRDGPVGKSSSLSNKRPPGEVKSSDESAVKKPKLSGPTAAINKKQATLKAEPKVEDDDD 294
Query: 1897 --------------------------HVPISQRMKKTASSDKKSTPVKKMTKPTPVITXX 1796
HVPI+QRMKK+ +S +S+ VKK+ K
Sbjct: 295 DILISQTAKKMFASASKPKSNDDDDDHVPITQRMKKSTTSVSQSSSVKKVAKVVSSSLKK 354
Query: 1795 XXXXXXXXXXXXKYSGSSKVPPSSGEGQKWTTLVHNGVIFPPPYKPHGVKMLYKGKPVDL 1616
KYS SSKVPP SGEGQKWTTLVHNGVIFPPPYKPHGVKMLYKG+PV L
Sbjct: 355 TNKKSKKIIKKSKYSKSSKVPPGSGEGQKWTTLVHNGVIFPPPYKPHGVKMLYKGQPVTL 414
Query: 1615 TPEQEEVATMYAVMLETEYMNKPKFKENFMSDWRKILGRNHVIQSLEHCDFTPIFEWHXX 1436
TPEQEEVATM+AVML+T+YM+KP+FKENF SDW++ILG+NH IQ+LE CDF PI+EWH
Sbjct: 415 TPEQEEVATMFAVMLDTDYMSKPQFKENFFSDWKRILGKNHTIQNLEDCDFRPIYEWHQK 474
Query: 1435 XXXXXXXXXXXXXXXXXXXXXXXXXKYMWAILDGVKEKVGNFRVEPPGLFRGRGEHPKMG 1256
KYMWAI+DGVKEKVGNFRVEPPGLFRGRGEHPKMG
Sbjct: 475 EKEKKKQMTTEEKKSLKEEKLKQEEKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMG 534
Query: 1255 KLKKRIRPSDITINIGKDAPIPECPISGESWKEIRHDNTVTWLAFWNDPINPKEFKYVFL 1076
KLKKRIRP DITINIGKDAPIPECPI GE WKEIRHDNTVTWLAFWNDPINPKEFKYVFL
Sbjct: 535 KLKKRIRPRDITINIGKDAPIPECPIPGERWKEIRHDNTVTWLAFWNDPINPKEFKYVFL 594
Query: 1075 AASSTLKGQSDKEKYEKARLLKDYIQGIRTAYTRDFTSNDPTKKQIAVATYLIDKLALRA 896
AASSTLKGQSDKEKYEKARLLKDYI GIRTAYT+DF S DP KKQIAVATYLIDKLALRA
Sbjct: 595 AASSTLKGQSDKEKYEKARLLKDYIHGIRTAYTKDFASKDPMKKQIAVATYLIDKLALRA 654
Query: 895 GNEKDDDEADTVGCCTLKVENVEPVPPNILKFDFLGKDSIRYQNEVEVEIAVFKAIQQFR 716
GNEKDDDEADTVGCCTLKVENVEPVPPNILKFDFLGKDSIRYQNEVEVE VFKAIQQFR
Sbjct: 655 GNEKDDDEADTVGCCTLKVENVEPVPPNILKFDFLGKDSIRYQNEVEVESGVFKAIQQFR 714
Query: 715 SRKKGGDDIFDKLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDMLSRETKGGDIAQNV 536
S K+G +D+FDKLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDMLSR+T GGD+ + V
Sbjct: 715 SGKEGSEDLFDKLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDMLSRKTNGGDVLEKV 774
Query: 535 VVYQHANKEVAIICNHQRTVSKSHSAQMSRLNEKIDELKGVIEELRTDLARAKKGKPPLK 356
VVYQ ANKEVAIICNHQRTVSK+HSAQMSRLNEKI+ELKGV+EEL+TDL+RAKKGKPPLK
Sbjct: 775 VVYQQANKEVAIICNHQRTVSKTHSAQMSRLNEKIEELKGVLEELKTDLSRAKKGKPPLK 834
Query: 355 SADGKPKRNLNPDALEKKIAQTTVKIEKMERDKETKEDLKTVALGTSKINYLDPRITVAW 176
+ADGKPKRNLNP+ALE+KIAQT KIEKMERDKETKEDLKTVALGTSKINYLDPRITVAW
Sbjct: 835 NADGKPKRNLNPEALERKIAQTNAKIEKMERDKETKEDLKTVALGTSKINYLDPRITVAW 894
Query: 175 CKRHEVPIEKIFNKSLLAKFAWAMDVEPGFRF 80
CKRHEVPIEKIFNKSLLAKFAW+MDV+P FRF
Sbjct: 895 CKRHEVPIEKIFNKSLLAKFAWSMDVDPSFRF 926
>dbj|BAG31377.1| topoisomerase I [Catharanthus roseus]
Length = 910
Score = 1111 bits (2873), Expect = 0.0
Identities = 595/919 (64%), Positives = 664/919 (72%), Gaps = 27/919 (2%)
Frame = -2
Query: 2755 MAVEAYXXXXXXXXXXXXXEPLVFXXXXXXXXXXXXXXXXXXSVPQKHEQQSGRPASDVR 2576
MAVEA EP+VF QK + QS R D R
Sbjct: 1 MAVEACPTPNLRDDMDEDDEPIVFKRNNSASKQSQTNSETRKVSSQKRDGQSVRQIYDSR 60
Query: 2575 PQNGQNNFVQKSKMVPSSKT----------PLDRXXXXXXXXXXXXXXXXXXXSMVDSKP 2426
P NG+++ QK +MVP SK P S V S P
Sbjct: 61 PANGESSSGQKGRMVPPSKPSQVKSPLSSPPSKPSQVKSPLSSPKVSTSSAKKSPVSSLP 120
Query: 2425 STSMTNESNSVK----RQIKGESVLNETTPGPNE-------DLEDSEDDKPLSARLLAGQ 2279
+ S + S S K Q K +V+ E P D EDS+D KPLS R A
Sbjct: 121 ANSKPSTSGSFKVKPFNQHKSATVIKEEKSSPLRLASAIINDSEDSDDGKPLSLRHSASS 180
Query: 2278 PKVNSGNANKVANASNFGQKSKIPKSEDSDDEMPLSSKFRVKSNAGDPTHRSSTSGEKKP 2099
K GN N+V S G K P++EDSDDE PLSS+F +KS G+ T ++ S + KP
Sbjct: 181 SK---GNTNQV---SKEGSK---PENEDSDDEKPLSSRFPLKSGVGESTSKAYDSDDDKP 231
Query: 2098 LLAECRQNGSASMERKP---STVLKKRIGDSVKPADGSYLKKPKLSETSTLHKNKESSVI 1928
L + + NGSA + +P S + KR +K ++ +KKPKLS + K++SV
Sbjct: 232 LAKKLQHNGSAMRDGQPNKYSNMSNKRPPGDIKSSNQLSVKKPKLSSVTAPTNKKQASVK 291
Query: 1927 SEMK-EEDDEDHVPISQRMKKTASSDKKSTPVKKMTKPTPVITXXXXXXXXXXXXXXKYS 1751
E K E+DD+DH+PISQR+KK+ +S+ KS+ +KK TK KYS
Sbjct: 292 PEPKAEDDDDDHLPISQRIKKSPTSESKSSSIKKTTKVVSSSVKKVNKKSKKVMKNSKYS 351
Query: 1750 GSSKVPPSSGEGQKWTTLVHNGVIFPPPYKPHGVKMLYKGKPVDLTPEQEEVATMYAVML 1571
SSKVPPSSGEG+KW L HNGVIFPPPYKPHG+KMLYKGKPVDLTPEQEEVATM+AVML
Sbjct: 352 KSSKVPPSSGEGKKWNKLEHNGVIFPPPYKPHGIKMLYKGKPVDLTPEQEEVATMFAVML 411
Query: 1570 ETEYMNKPKFKENFMSDWRKILGRNHVIQSLEHCDFTPIFEWHXXXXXXXXXXXXXXXXX 1391
+T+YMNKP+FKENF DW+KILG+NHVIQ+LE+CDF+PI+EWH
Sbjct: 412 DTDYMNKPRFKENFFGDWKKILGKNHVIQNLENCDFSPIYEWHQSEKEKKKQMTTEEKKA 471
Query: 1390 XXXXXXXXXXKYMWAILDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPSDITINI 1211
KYMWA +DG KEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRP DITINI
Sbjct: 472 LKEEKLKQEEKYMWAWVDGKKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPCDITINI 531
Query: 1210 GKDAPIPECPISGESWKEIRHDNTVTWLAFWNDPINPKEFKYVFLAASSTLKGQSDKEKY 1031
GKDAPIPECP+ GE WKE+RHDNTVTWLAFWNDPINPKEFKYVFLAASSTLKG SDKEKY
Sbjct: 532 GKDAPIPECPVPGERWKEVRHDNTVTWLAFWNDPINPKEFKYVFLAASSTLKGLSDKEKY 591
Query: 1030 EKARLLKDYIQGIRTAYTRDFTSNDPTKKQIAVATYLIDKLALRAGNEKDDDEADTVGCC 851
EKARLLKDYIQGIR AYT+DF S DPTKKQIAVATYLIDKLALRAGNEKDDDEADTVGCC
Sbjct: 592 EKARLLKDYIQGIRAAYTKDFASKDPTKKQIAVATYLIDKLALRAGNEKDDDEADTVGCC 651
Query: 850 TLKVENVEPVPPNILKFDFLGKDSIRYQNEVEVEIAVFKAIQQFRSRKKGGDDIFDKLDT 671
TLKVENVEPVPPNILKFDFLGKDSIRYQNEVEVE AVFKAIQQFRS K+G D+FD LDT
Sbjct: 652 TLKVENVEPVPPNILKFDFLGKDSIRYQNEVEVEAAVFKAIQQFRSGKEGSSDLFDLLDT 711
Query: 670 SKLNAHLKELMPGLTAKVFRTYNASITLDDMLSRETKGGDIAQNVVVYQHANKEVAIICN 491
SKLNAHLKELMPGLTAKVFRTYNASITLDDMLSRETKGGD+A+ VVVYQHANKEVAIICN
Sbjct: 712 SKLNAHLKELMPGLTAKVFRTYNASITLDDMLSRETKGGDVAEKVVVYQHANKEVAIICN 771
Query: 490 HQRTVSKSHSAQMSRLNEKIDELKGVIEELRTDLARAKKGKPPLKS--ADGKPKRNLNPD 317
HQRTVSKSHSAQM RLNEKI+ELK V+EEL++DL+R KKGKPPLKS ADGKPKRNLNP+
Sbjct: 772 HQRTVSKSHSAQMLRLNEKIEELKAVVEELKSDLSRVKKGKPPLKSKNADGKPKRNLNPE 831
Query: 316 ALEKKIAQTTVKIEKMERDKETKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFN 137
+LEKKIAQT KIEKMERDKETKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFN
Sbjct: 832 SLEKKIAQTNAKIEKMERDKETKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFN 891
Query: 136 KSLLAKFAWAMDVEPGFRF 80
KSLLAKF WAMDV+P FRF
Sbjct: 892 KSLLAKFTWAMDVDPSFRF 910
>dbj|BAG31376.1| topoisomerase I [Camptotheca acuminata]
Length = 894
Score = 1102 bits (2851), Expect = 0.0
Identities = 579/857 (67%), Positives = 656/857 (76%), Gaps = 10/857 (1%)
Frame = -2
Query: 2620 QKHEQQSGRPASDVRPQNGQNNFVQKSKM--VPSSKTPLDRXXXXXXXXXXXXXXXXXXX 2447
Q+++ QSGR SDV NGQ++ K K + S K+P+
Sbjct: 45 QRYDGQSGRQVSDVPSTNGQSSSASKGKTTKLSSMKSPIASPKASTSFAKASPVANPKVS 104
Query: 2446 SMVDSKPS-TSMTNESNSVKRQIKGESVLNETTPGPNEDLEDSEDDKPLSARLLAGQPKV 2270
S D + +S N N VK + E E DSED+KPLSARL G K
Sbjct: 105 SSSDDRSKHSSKQNTINVVKEE-------KELVNPAAEPYGDSEDEKPLSARLFTGLTKG 157
Query: 2269 NSGNANK-VANASNFGQKSKIPK----SEDSDDEMPLSSKFRVKSNAGDPTHRSSTSGEK 2105
+S NANK + N+S P+ S+DSDDE+PLSSKFR+K+NAG T +S S +
Sbjct: 158 SSNNANKGLINSSPASLPVPKPEINRYSDDSDDEIPLSSKFRLKANAGTSTVKSYESDDN 217
Query: 2104 KPLLAECRQNGSASMERKPSTVLKKRIGDSVKPADGSYLKKPKLSETSTLHKNKESSVIS 1925
K L++ +QNGS + K S + KR VK + S +KKPKLS+ ST NK++S +
Sbjct: 218 KTLVSNFQQNGSINRGSKSSIKVNKRPLGEVKSSVQSSVKKPKLSDASTPVNNKQASKKA 277
Query: 1924 EMKEED-DEDHVPISQRMKKTASSDKKSTPVK-KMTKPTPVITXXXXXXXXXXXXXXKYS 1751
E K +D D+DHVPISQRMKK+A+S KS+ K K+TK KYS
Sbjct: 278 EPKADDSDDDHVPISQRMKKSATSGNKSSTAKQKVTKVVSSSMKKASKKFKKVVKKSKYS 337
Query: 1750 GSSKVPPSSGEGQKWTTLVHNGVIFPPPYKPHGVKMLYKGKPVDLTPEQEEVATMYAVML 1571
SSKVPPSSGEG+KW TLVHNGVIFPPPYKPHGVKMLYKGKPVDLTPEQEEVATM+AVML
Sbjct: 338 KSSKVPPSSGEGKKWNTLVHNGVIFPPPYKPHGVKMLYKGKPVDLTPEQEEVATMFAVML 397
Query: 1570 ETEYMNKPKFKENFMSDWRKILGRNHVIQSLEHCDFTPIFEWHXXXXXXXXXXXXXXXXX 1391
+T+YM K KFKENFM DWRKILG+NHVIQ+LE CDFTPI+EWH
Sbjct: 398 DTDYMTKSKFKENFMDDWRKILGKNHVIQNLEDCDFTPIYEWHQREKEKKKKMTAEEKKV 457
Query: 1390 XXXXXXXXXXKYMWAILDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPSDITINI 1211
KYMWAI++GVKEKVGNFRVEPP LFRGRGEHPKMGKLKK IRPSDITINI
Sbjct: 458 LKEERLKQEEKYMWAIVNGVKEKVGNFRVEPPSLFRGRGEHPKMGKLKKCIRPSDITINI 517
Query: 1210 GKDAPIPECPISGESWKEIRHDNTVTWLAFWNDPINPKEFKYVFLAASSTLKGQSDKEKY 1031
GKDAPIPECPI GESWKEIRHDNTVTWLAFWNDPI P+EFKYVFLAASS+LKGQSDKEKY
Sbjct: 518 GKDAPIPECPIPGESWKEIRHDNTVTWLAFWNDPIKPREFKYVFLAASSSLKGQSDKEKY 577
Query: 1030 EKARLLKDYIQGIRTAYTRDFTSNDPTKKQIAVATYLIDKLALRAGNEKDDDEADTVGCC 851
EKARLLKD+IQGIR AYT+DF S D TK+QIAVATYLIDKLALRAGNEKDDDEADTVGCC
Sbjct: 578 EKARLLKDFIQGIRAAYTKDFASKDITKRQIAVATYLIDKLALRAGNEKDDDEADTVGCC 637
Query: 850 TLKVENVEPVPPNILKFDFLGKDSIRYQNEVEVEIAVFKAIQQFRSRKKGGDDIFDKLDT 671
TLKVENVEP PP+ILKFDFLGKDSIRYQNEVEVE+ V+KAIQQFR+ K+GGDD+FDKLDT
Sbjct: 638 TLKVENVEPKPPSILKFDFLGKDSIRYQNEVEVELPVYKAIQQFRTGKRGGDDLFDKLDT 697
Query: 670 SKLNAHLKELMPGLTAKVFRTYNASITLDDMLSRETKGGDIAQNVVVYQHANKEVAIICN 491
SKLNAHLK LMPGLTAKVFRTYNASITLD+MLSRETKGG++A+ +VVYQHANKEVAIICN
Sbjct: 698 SKLNAHLKGLMPGLTAKVFRTYNASITLDEMLSRETKGGNVAEKIVVYQHANKEVAIICN 757
Query: 490 HQRTVSKSHSAQMSRLNEKIDELKGVIEELRTDLARAKKGKPPLKSADGKPKRNLNPDAL 311
HQRTVSKSH AQM+RLN KIDELKG+++ L+TDLARAKKGKPPL+ ADGKPKRNL P+AL
Sbjct: 758 HQRTVSKSHPAQMTRLNGKIDELKGILDGLQTDLARAKKGKPPLEDADGKPKRNLTPEAL 817
Query: 310 EKKIAQTTVKIEKMERDKETKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKS 131
E+KI QT KIEKMERDKETKE LKT+ALGTSKI+YLDPRITVAWCKRHEVPIEK+FNKS
Sbjct: 818 ERKIGQTNAKIEKMERDKETKEGLKTIALGTSKISYLDPRITVAWCKRHEVPIEKVFNKS 877
Query: 130 LLAKFAWAMDVEPGFRF 80
LLAKFAW+MDV+P FRF
Sbjct: 878 LLAKFAWSMDVDPSFRF 894
>dbj|BAK32960.1| topoisomerase I [Ophiorrhiza pseudofasciculata]
Length = 925
Score = 1102 bits (2849), Expect = 0.0
Identities = 578/882 (65%), Positives = 652/882 (73%), Gaps = 35/882 (3%)
Frame = -2
Query: 2620 QKHEQQSGRPASDVRPQNGQNNFVQKSKMVPSSKTP-LDRXXXXXXXXXXXXXXXXXXXS 2444
QK + QS SDVRP NG+++ QK ++ PS+KTP +
Sbjct: 45 QKQDGQSAVHTSDVRPANGESSSAQKGRIQPSAKTPPVKSPLSSPKASNSSAKASPITSP 104
Query: 2443 MVDSKPSTSMTNESNSVKRQIKGESVLNETTPG-----PNEDLEDSEDDKPLSARLLAGQ 2279
+SKPS S T+ + K + E P N + E S+D+KPLSAR
Sbjct: 105 GANSKPSASATSTAKQQNHH-KSSAAFIEPKPSVPAAKANSNSESSDDEKPLSARTFGCS 163
Query: 2278 PKVNSGNANKVANASNFGQKSKIPKSEDSDDEMPLSSKFRVKSNAGDPTHRSSTSGEKKP 2099
K S +ANK S ++ I +SEDS+DE PLS +F KS+ G+ T +S S EKKP
Sbjct: 164 SKGKSNHANKEGGDSCSIRRPVIEESEDSEDEKPLSCRFTSKSSLGESTSKSYDSDEKKP 223
Query: 2098 LLAECRQNGSASME---RKPSTVLKKRIGDSVKPADGSYLKKPKLSETSTLHKNKESSVI 1928
L A+ +QNGSAS + K +++ KR K + S +KKPKLS T NK+++V
Sbjct: 224 LAAKVQQNGSASRDGPMNKSASLSNKRPPGEAKSLNQSSVKKPKLSSPITSISNKQAAVK 283
Query: 1927 SEMKEEDDEDHVPISQRMKKT-------------------------ASSDKKSTPVKKMT 1823
E K EDD+D++P+SQR KK+ AS K S PVKK +
Sbjct: 284 PEPKAEDDDDNIPLSQRGKKSQSATSKPKDDDDDNVPISQRIKKSPASVSKSSVPVKKAS 343
Query: 1822 KPTPVITXXXXXXXXXXXXXXKYSGSSKVPPSSGEGQKWTTLVHNGVIFPPPYKPHGVKM 1643
Y+ SSKVPP SGEGQKWTTLVHNGVIFPPPYKPHGVKM
Sbjct: 344 TVVSSSLKKVNKNSKKVIKKTAYTKSSKVPPGSGEGQKWTTLVHNGVIFPPPYKPHGVKM 403
Query: 1642 LYKGKPVDLTPEQEEVATMYAVMLETEYMNKPKFKENFMSDWRKILGRNHVIQSLEHCDF 1463
LYK +P+ LTPEQEEVATM+AVML+T+YMNKP FKENF SDW+KILG+NH+IQ+LE CDF
Sbjct: 404 LYKRQPITLTPEQEEVATMFAVMLDTDYMNKPCFKENFFSDWKKILGKNHMIQNLEDCDF 463
Query: 1462 TPIFEWHXXXXXXXXXXXXXXXXXXXXXXXXXXXKYMWAILDGVKEKVGNFRVEPPGLFR 1283
PI+EWH KYMWAI+DGVKEKVGNFRVEPPGLFR
Sbjct: 464 GPIYEWHQQEKEKKKQMTTEEKKALKEEKLQQEEKYMWAIVDGVKEKVGNFRVEPPGLFR 523
Query: 1282 GRGEHPKMGKLKKRIRPSDITINIGKDAPIPECPISGESWKEIRHDNTVTWLAFWNDPIN 1103
GRGEHPKMGKLKKRIRP DITINIGKDAPIPECPI GE WKE+R+ NTVTWLA+WNDPIN
Sbjct: 524 GRGEHPKMGKLKKRIRPRDITINIGKDAPIPECPIPGERWKEVRNGNTVTWLAYWNDPIN 583
Query: 1102 PKEFKYVFLAASSTLKGQSDKEKYEKARLLKDYIQGIRTAYTRDFTSN-DPTKKQIAVAT 926
KEFKYVFLAASSTLKGQSDKEKYEKARLLKDYI GIR AYT+DFT+N DP KKQIAVAT
Sbjct: 584 QKEFKYVFLAASSTLKGQSDKEKYEKARLLKDYIHGIRAAYTKDFTNNKDPMKKQIAVAT 643
Query: 925 YLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPNILKFDFLGKDSIRYQNEVEVEI 746
YLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPNILKFDFLGKDSIRYQNEV+VE
Sbjct: 644 YLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPNILKFDFLGKDSIRYQNEVQVEP 703
Query: 745 AVFKAIQQFRSRKKGGDDIFDKLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDMLSRE 566
AVFKAIQQFRS K+G +D+FD+LDTSKLNAHLKELMPGLTAKVFRTYNASITLDDMLS+E
Sbjct: 704 AVFKAIQQFRSGKEGSEDLFDRLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDMLSKE 763
Query: 565 TKGGDIAQNVVVYQHANKEVAIICNHQRTVSKSHSAQMSRLNEKIDELKGVIEELRTDLA 386
TKGG++A+NVVVYQHANKEVAIICNHQRTVSKSHSAQMSRLNEKIDELK +EEL+TDL+
Sbjct: 764 TKGGEVAENVVVYQHANKEVAIICNHQRTVSKSHSAQMSRLNEKIDELKTALEELKTDLS 823
Query: 385 RAKKGKPPLKSADGKPKRNLNPDALEKKIAQTTVKIEKMERDKETKEDLKTVALGTSKIN 206
RAKKGKPP K ADGK KRNLNP+ALE+KI QT KIEKMERDKETKEDLKTVALGTSKIN
Sbjct: 824 RAKKGKPPTKGADGKAKRNLNPEALERKITQTNAKIEKMERDKETKEDLKTVALGTSKIN 883
Query: 205 YLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMDVEPGFRF 80
YLDPRITVAWCKRHEVPIEKIFNKSLLAKFAW+MDV+P FRF
Sbjct: 884 YLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWSMDVDPSFRF 925
>dbj|BAG31375.1| topoisomerase I [Ophiorrhiza japonica]
Length = 927
Score = 1093 bits (2828), Expect = 0.0
Identities = 576/884 (65%), Positives = 650/884 (73%), Gaps = 37/884 (4%)
Frame = -2
Query: 2620 QKHEQQSGRPASDVRPQNGQNNFVQKSKMVPSSKTP-LDRXXXXXXXXXXXXXXXXXXXS 2444
QKH QS SDVRP NG+++ QK ++ PS+KTP +
Sbjct: 45 QKHVGQSAVHTSDVRPANGESSSAQKGRIQPSAKTPPVKSPLSSPKASNSSAKASPITSP 104
Query: 2443 MVDSKPSTSMTNESNSVKRQIKGESVLNETTPG-----PNEDLEDSEDDKPLSARLLAGQ 2279
+SKPS S T+ + K + E P N + E S+D+KPLSAR
Sbjct: 105 GANSKPSASATSTAKQQNHH-KSSAAFIEPKPSVPAAKANSNSESSDDEKPLSARTFGCS 163
Query: 2278 PKVNSGNANKVANASNFGQKSKIPKSEDSDDEMPLSSKFRVKSNAGDPTHRSSTSGEKKP 2099
K S +ANK S ++ I +SEDS+DE PLS +F KS+ G+ T +S S EKKP
Sbjct: 164 SKGKSNHANKEGGDSCSIRRRVIEESEDSEDEKPLSRRFTSKSSLGESTSKSYDSDEKKP 223
Query: 2098 LLAECRQNGSASME---RKPSTVLKKRIGDSVKPADGSYLKKPKLSETSTLHKNKESSVI 1928
L A+ +QNGS S + K +++ KR VK + S +KKPKLS T NK+++V
Sbjct: 224 LAAKVQQNGSVSRDGPMNKSASLSNKRPPGEVKSLNQSSVKKPKLSSPITSISNKQAAVK 283
Query: 1927 SEM--KEEDDEDHVPISQRMKKT-------------------------ASSDKKSTPVKK 1829
E K EDD+D++P+SQR KK+ AS K S PVKK
Sbjct: 284 PEPEPKAEDDDDNIPLSQRGKKSQAATSKPKDEDDDNVPIAQRIKKSPASVSKSSAPVKK 343
Query: 1828 MTKPTPVITXXXXXXXXXXXXXXKYSGSSKVPPSSGEGQKWTTLVHNGVIFPPPYKPHGV 1649
+ Y+ SSKVPP SGEGQKWTTLVHNGVIFPPPY PHGV
Sbjct: 344 ASTVVSPSLKKVNKNSKKVIKKTAYTKSSKVPPGSGEGQKWTTLVHNGVIFPPPYNPHGV 403
Query: 1648 KMLYKGKPVDLTPEQEEVATMYAVMLETEYMNKPKFKENFMSDWRKILGRNHVIQSLEHC 1469
KMLYK +P+ LTPEQEEVATM+AVML+T+YMNKP+FKENF SDW+K+LG+NH IQ+LE C
Sbjct: 404 KMLYKRQPITLTPEQEEVATMFAVMLDTDYMNKPRFKENFFSDWKKMLGKNHTIQNLEDC 463
Query: 1468 DFTPIFEWHXXXXXXXXXXXXXXXXXXXXXXXXXXXKYMWAILDGVKEKVGNFRVEPPGL 1289
DF PI+EWH KYMWAI+DGVKEKVGNFRVEPPGL
Sbjct: 464 DFGPIYEWHQQEKEKKKQMTTEEKKALKEDKLQQEEKYMWAIVDGVKEKVGNFRVEPPGL 523
Query: 1288 FRGRGEHPKMGKLKKRIRPSDITINIGKDAPIPECPISGESWKEIRHDNTVTWLAFWNDP 1109
FRGRGEHPKMGKLKKRIRP DITINIGKDAPIPECPI GE WKE+R+DNTVTWLAFW DP
Sbjct: 524 FRGRGEHPKMGKLKKRIRPRDITINIGKDAPIPECPIPGERWKEVRNDNTVTWLAFWIDP 583
Query: 1108 INPKEFKYVFLAASSTLKGQSDKEKYEKARLLKDYIQGIRTAYTRDFTSN-DPTKKQIAV 932
IN KEFKYVFLAASSTLKGQSDKEKYEKARLLKDYI GIR AYT+DFT+N DP KKQIAV
Sbjct: 584 INQKEFKYVFLAASSTLKGQSDKEKYEKARLLKDYIHGIRAAYTKDFTNNKDPMKKQIAV 643
Query: 931 ATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPNILKFDFLGKDSIRYQNEVEV 752
ATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPNILKFDFLGKDSIRYQNEV+V
Sbjct: 644 ATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPNILKFDFLGKDSIRYQNEVQV 703
Query: 751 EIAVFKAIQQFRSRKKGGDDIFDKLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDMLS 572
E AVFKAIQQFRS K+G +D+FD+LDTSKLNAHLKELMPGLTAKVFRTYNASITLDDMLS
Sbjct: 704 EPAVFKAIQQFRSGKEGSEDLFDRLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDMLS 763
Query: 571 RETKGGDIAQNVVVYQHANKEVAIICNHQRTVSKSHSAQMSRLNEKIDELKGVIEELRTD 392
+ETKGG++A+ VVVYQHANKEVAIICNHQRTVSKSHSAQMSRLNEKIDELK +EEL+TD
Sbjct: 764 KETKGGEVAEKVVVYQHANKEVAIICNHQRTVSKSHSAQMSRLNEKIDELKTAMEELKTD 823
Query: 391 LARAKKGKPPLKSADGKPKRNLNPDALEKKIAQTTVKIEKMERDKETKEDLKTVALGTSK 212
L+R KKGKPP K ADGKPKRNLNP+ALE+K+AQ KIEKMERDKETKEDLKTVALGTSK
Sbjct: 824 LSRVKKGKPPSKGADGKPKRNLNPEALERKMAQINAKIEKMERDKETKEDLKTVALGTSK 883
Query: 211 INYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMDVEPGFRF 80
INYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAW+MDV+P FRF
Sbjct: 884 INYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWSMDVDPSFRF 927
>dbj|BAK32962.1| topoisomerase I [Ophiorrhiza trichocarpon var. glabra]
Length = 920
Score = 1090 bits (2818), Expect = 0.0
Identities = 573/875 (65%), Positives = 647/875 (73%), Gaps = 35/875 (4%)
Frame = -2
Query: 2620 QKHEQQSGRPASDVRPQNGQNNFVQKSKMVPSSKTP-LDRXXXXXXXXXXXXXXXXXXXS 2444
Q+H QS SDVRP NG+N+ QK ++ PS+KTP + +
Sbjct: 46 QRHVGQSAVHTSDVRPANGENSSAQKGRIQPSAKTPPVKSPLSSPKASNSSAKASPITSA 105
Query: 2443 MVDSKPSTSMTNESNSVKRQIKGESVLNETTPG-----PNEDLEDSEDDKPLSARLLAGQ 2279
+SKPS S T+ + K + E P N + E S+D+KPLSAR
Sbjct: 106 GANSKPSASATSTAKQQNHH-KSSAAFIEPKPSVPAAKANSNSESSDDEKPLSARTFGCS 164
Query: 2278 PKVNSGNANKVANASNFGQKSKIPKSEDSDDEMPLSSKFRVKSNAGDPTHRSSTSGEKKP 2099
K S +ANK S ++ I +SEDS+DE PLS +F KS+ G+ T +S S EKKP
Sbjct: 165 SKGKSNHANKEGGDSCSIRRPVIEESEDSEDEKPLSRRFTSKSSLGESTSKSYDSDEKKP 224
Query: 2098 LLAECRQNGSASME---RKPSTVLKKRIGDSVKPADGSYLKKPKLSETSTLHKNKESSVI 1928
L A+ + NGSAS + K +++ KR VK + S LKKPKLS T NK+++V
Sbjct: 225 LAAKVQPNGSASRDSPMNKSASLSNKRPPGEVKSLNQSSLKKPKLSSPITSISNKQAAVK 284
Query: 1927 SEMKEEDDEDHVPISQRMKKT-------------------------ASSDKKSTPVKKMT 1823
E K EDD+D++P+SQR KK+ AS K S PVKK +
Sbjct: 285 PEPKAEDDDDNIPLSQRGKKSQTATSKPKDEDDDNVPISQRIKKSPASVSKSSAPVKKAS 344
Query: 1822 KPTPVITXXXXXXXXXXXXXXKYSGSSKVPPSSGEGQKWTTLVHNGVIFPPPYKPHGVKM 1643
Y+ SSKVPP SGEGQKWTTLVHNGVIFPPPYKPHGVKM
Sbjct: 345 TVVSPSLKKVNKKSKKVIKKTAYTKSSKVPPGSGEGQKWTTLVHNGVIFPPPYKPHGVKM 404
Query: 1642 LYKGKPVDLTPEQEEVATMYAVMLETEYMNKPKFKENFMSDWRKILGRNHVIQSLEHCDF 1463
LYK +P+ LTPEQEEVATM+AVML+T+YMNKP+FKENF SDW+K+LG+NH IQ+LE CDF
Sbjct: 405 LYKRQPITLTPEQEEVATMFAVMLDTDYMNKPRFKENFFSDWKKMLGKNHTIQNLEDCDF 464
Query: 1462 TPIFEWHXXXXXXXXXXXXXXXXXXXXXXXXXXXKYMWAILDGVKEKVGNFRVEPPGLFR 1283
PI+EWH KYMWAI+DGVKEKVGNFRVEPPGLFR
Sbjct: 465 GPIYEWHQQEKEKKKQMTTEEKKALKEEKLQQEEKYMWAIVDGVKEKVGNFRVEPPGLFR 524
Query: 1282 GRGEHPKMGKLKKRIRPSDITINIGKDAPIPECPISGESWKEIRHDNTVTWLAFWNDPIN 1103
GRGEHPKMGKLKKRIRP DITINIGKDAPIPECPI GE WKE+R+DNTVTWLA+WNDPIN
Sbjct: 525 GRGEHPKMGKLKKRIRPRDITINIGKDAPIPECPIPGERWKEVRNDNTVTWLAYWNDPIN 584
Query: 1102 PKEFKYVFLAASSTLKGQSDKEKYEKARLLKDYIQGIRTAYTRDFTSN-DPTKKQIAVAT 926
KEFKYVFLAASSTLKGQSDKEKYEKARLLKDYI GIR AYT+DFT+N DP KKQIAVAT
Sbjct: 585 QKEFKYVFLAASSTLKGQSDKEKYEKARLLKDYIHGIRAAYTKDFTNNKDPMKKQIAVAT 644
Query: 925 YLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPNILKFDFLGKDSIRYQNEVEVEI 746
YLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPNILKFDFLGKDSIRYQNEV+VE
Sbjct: 645 YLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPNILKFDFLGKDSIRYQNEVQVEP 704
Query: 745 AVFKAIQQFRSRKKGGDDIFDKLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDMLSRE 566
AVFKAIQQFRS K+G +D+FD+LDTSKLNAHLKELMPGLTAKVFRTYNASITLDDMLS++
Sbjct: 705 AVFKAIQQFRSGKEGSEDLFDRLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDMLSKK 764
Query: 565 TKGGDIAQNVVVYQHANKEVAIICNHQRTVSKSHSAQMSRLNEKIDELKGVIEELRTDLA 386
T GG++A+ VVVYQHANKEVAIICNHQRTVSKSHSAQMSRLNEKIDELK +EEL+TDL+
Sbjct: 765 TNGGEVAEKVVVYQHANKEVAIICNHQRTVSKSHSAQMSRLNEKIDELKTALEELKTDLS 824
Query: 385 RAKKGKPPLKSADGKPKRNLNPDALEKKIAQTTVKIEKMERDKETKEDLKTVALGTSKIN 206
RAKKGKP K ADGKPKRNLNP+ALE+KIAQT KIEKMERDKETKEDLKTVALGTSKIN
Sbjct: 825 RAKKGKPLSKGADGKPKRNLNPEALERKIAQTNAKIEKMERDKETKEDLKTVALGTSKIN 884
Query: 205 YLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMD 101
YLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAM+
Sbjct: 885 YLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMN 919
>dbj|BAK32958.1| topoisomerase I [Ophiorrhiza pedunculata]
Length = 920
Score = 1089 bits (2816), Expect = 0.0
Identities = 573/875 (65%), Positives = 645/875 (73%), Gaps = 35/875 (4%)
Frame = -2
Query: 2620 QKHEQQSGRPASDVRPQNGQNNFVQKSKMVPSSKTP-LDRXXXXXXXXXXXXXXXXXXXS 2444
QKH QS SDVRP NG+N+ QK ++ PS+KTP +
Sbjct: 46 QKHVGQSAVHTSDVRPANGENSSAQKGRIQPSAKTPPVKSPLSSPKASNSSAKASPITSP 105
Query: 2443 MVDSKPSTSMTNESNSVKRQIKGESVLNETTPG-----PNEDLEDSEDDKPLSARLLAGQ 2279
+SKPS S T+ + K + E P N + E S+D+KPLSAR
Sbjct: 106 GANSKPSASATSTAKQQNHH-KSSAAFIEPKPSVPAAKANSNSESSDDEKPLSARTFGCS 164
Query: 2278 PKVNSGNANKVANASNFGQKSKIPKSEDSDDEMPLSSKFRVKSNAGDPTHRSSTSGEKKP 2099
K S +ANK S ++ I +SEDS+DE PLS +F KS+ G+ T +S S EKKP
Sbjct: 165 SKGKSNHANKEGGDSCSIRRPVIEESEDSEDEKPLSRRFTSKSSLGESTSKSYDSDEKKP 224
Query: 2098 LLAECRQNGSASME---RKPSTVLKKRIGDSVKPADGSYLKKPKLSETSTLHKNKESSVI 1928
L A+ + NGSAS + K +++ KR VK + S LKKPKLS T NK+++V
Sbjct: 225 LAAKVQPNGSASRDSPMNKSASLSNKRPPGEVKSLNQSSLKKPKLSSPITSISNKQAAVK 284
Query: 1927 SEMKEEDDEDHVPISQRMKKT-------------------------ASSDKKSTPVKKMT 1823
E K EDD+D++P+SQR KK+ AS K S PVKK +
Sbjct: 285 PEPKAEDDDDNIPLSQRGKKSQTATSKPKDEDDDNVPISQRIKKSPASVSKSSAPVKKAS 344
Query: 1822 KPTPVITXXXXXXXXXXXXXXKYSGSSKVPPSSGEGQKWTTLVHNGVIFPPPYKPHGVKM 1643
Y+ SSKVPP SGEGQKWTTLVHNGVIFPPPYKPHGVKM
Sbjct: 345 TVVSPSLKKVNKKSKKVIKKTAYTKSSKVPPGSGEGQKWTTLVHNGVIFPPPYKPHGVKM 404
Query: 1642 LYKGKPVDLTPEQEEVATMYAVMLETEYMNKPKFKENFMSDWRKILGRNHVIQSLEHCDF 1463
LYK +P+ LTPEQEEVATM+AVML+T+YMNKP+FKENF SDW+K+LG+NH IQ+LE CDF
Sbjct: 405 LYKRQPITLTPEQEEVATMFAVMLDTDYMNKPRFKENFFSDWKKMLGKNHTIQNLEDCDF 464
Query: 1462 TPIFEWHXXXXXXXXXXXXXXXXXXXXXXXXXXXKYMWAILDGVKEKVGNFRVEPPGLFR 1283
PI+EWH KYMWAI+DGVKEKVGNFRVEPPGLFR
Sbjct: 465 GPIYEWHQQEKEKKKQMTTEEKKALKEEKLQQEEKYMWAIVDGVKEKVGNFRVEPPGLFR 524
Query: 1282 GRGEHPKMGKLKKRIRPSDITINIGKDAPIPECPISGESWKEIRHDNTVTWLAFWNDPIN 1103
GRGEHPKMGKLKKRIRP DITINIGKDAPIPECPI GE WKE+R+DNTVTWLA+WNDPIN
Sbjct: 525 GRGEHPKMGKLKKRIRPRDITINIGKDAPIPECPIPGERWKEVRNDNTVTWLAYWNDPIN 584
Query: 1102 PKEFKYVFLAASSTLKGQSDKEKYEKARLLKDYIQGIRTAYTRDFTSN-DPTKKQIAVAT 926
KEFKYVFLAASSTLKGQSDKEKYEKARLLKDYI GIR AYT+DFT+N DP KKQIAVAT
Sbjct: 585 QKEFKYVFLAASSTLKGQSDKEKYEKARLLKDYIHGIRAAYTKDFTNNKDPMKKQIAVAT 644
Query: 925 YLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPNILKFDFLGKDSIRYQNEVEVEI 746
YLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPNILKFDFLGKDSIRYQNEV+VE
Sbjct: 645 YLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPNILKFDFLGKDSIRYQNEVQVEP 704
Query: 745 AVFKAIQQFRSRKKGGDDIFDKLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDMLSRE 566
AVFKAI QFRS K+G +D+FD+LDTSKLNAHLKELMPGLTAKVFRTYNASITLDDMLS++
Sbjct: 705 AVFKAIHQFRSGKEGSEDLFDRLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDMLSKK 764
Query: 565 TKGGDIAQNVVVYQHANKEVAIICNHQRTVSKSHSAQMSRLNEKIDELKGVIEELRTDLA 386
T GG++A+ VVVYQHANKEVAIICNHQRTVSKSHSAQMSRLNEKIDELK +EEL+TDL+
Sbjct: 765 TNGGEVAEKVVVYQHANKEVAIICNHQRTVSKSHSAQMSRLNEKIDELKTALEELKTDLS 824
Query: 385 RAKKGKPPLKSADGKPKRNLNPDALEKKIAQTTVKIEKMERDKETKEDLKTVALGTSKIN 206
RAKKGKP K ADGKPKRNLNP+ALE+KIAQT KIEKMERDKETKEDLKTVALGTSKIN
Sbjct: 825 RAKKGKPLSKGADGKPKRNLNPEALERKIAQTNAKIEKMERDKETKEDLKTVALGTSKIN 884
Query: 205 YLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMD 101
YLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAM+
Sbjct: 885 YLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMN 919
>ref|XP_009619726.1| PREDICTED: LOW QUALITY PROTEIN: DNA topoisomerase 1-like [Nicotiana
tomentosiformis]
Length = 877
Score = 1084 bits (2803), Expect = 0.0
Identities = 575/858 (67%), Positives = 646/858 (75%), Gaps = 11/858 (1%)
Frame = -2
Query: 2620 QKHEQQSGRPASDVRPQNGQNNFVQKSKMVPSSKTPLDRXXXXXXXXXXXXXXXXXXXSM 2441
QK + +SGR ASDVR NGQ++ QK K SSK
Sbjct: 43 QKQDGRSGRQASDVRSPNGQSSSAQKVKAGTSSKAS---RAVSPFTSPKASPSSGRTSPA 99
Query: 2440 VDSKPSTSMTNESNSVKRQIKGESVLNETTPG------PNEDLEDSEDDKPLSARLLAGQ 2279
+S+PS S N++ V +Q K V NE PN++ EDSEDDKPLSARL +G
Sbjct: 100 PNSRPSASAGNQAKDVNQQSK--IVPNEPKQAVEPKSEPNDEAEDSEDDKPLSARLSSGL 157
Query: 2278 PKVNSGNANKVANASNFGQKSKIPKSEDSDDEMPLSSKFRVKSNAGDPTHRSSTSGEKKP 2099
K NS +ANKV S QKS+ PK EDSDDE+PL+S+F++KSNAG T +SS S E KP
Sbjct: 158 SKSNSSHANKVLGTSASVQKSRPPKKEDSDDEIPLASRFQLKSNAGASTSKSSNSEEVKP 217
Query: 2098 LLAECRQNGSASMERKPSTVLKKRIGDSVKPADGSYLKKPKLSETSTL-----HKNKESS 1934
+ RQNG S +TVL KR P D S L + +L L + +S
Sbjct: 218 KI---RQNGLPS-----TTVLSKR-----PPGDVSLLLRLQLKSLGFLMHLHLFRVSXAS 264
Query: 1933 VISEMKEEDDEDHVPISQRMKKTASSDKKSTPVKKMTKPTPVITXXXXXXXXXXXXXXKY 1754
V E K EDD+D VPISQR+KK+ +S K + KK TK KY
Sbjct: 265 VKPEKKTEDDDDDVPISQRIKKSVASASKLSSAKKATK-----VVSSSMKTKKKLKKSKY 319
Query: 1753 SGSSKVPPSSGEGQKWTTLVHNGVIFPPPYKPHGVKMLYKGKPVDLTPEQEEVATMYAVM 1574
S SSK+ PSSGEGQKWTTLVHNGVIFPPPYKPHGVKMLYKGKPVDLTPEQEEVATMYAVM
Sbjct: 320 SKSSKLQPSSGEGQKWTTLVHNGVIFPPPYKPHGVKMLYKGKPVDLTPEQEEVATMYAVM 379
Query: 1573 LETEYMNKPKFKENFMSDWRKILGRNHVIQSLEHCDFTPIFEWHXXXXXXXXXXXXXXXX 1394
L+T+YM+K +FKENFM+DWRKILG+NHVIQ+L+ CDFTPI+EWH
Sbjct: 380 LDTDYMSKLQFKENFMNDWRKILGKNHVIQNLDDCDFTPIYEWHQSEKEKKKQMSTEEKK 439
Query: 1393 XXXXXXXXXXXKYMWAILDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPSDITIN 1214
KYMWAI+DGVKEKVGNFRVEPPGLFRGRGEHPKMGKLK+RIRP+DITIN
Sbjct: 440 ALREEKLKQEEKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKRRIRPNDITIN 499
Query: 1213 IGKDAPIPECPISGESWKEIRHDNTVTWLAFWNDPINPKEFKYVFLAASSTLKGQSDKEK 1034
IGK APIPECPI GE WKE+RHDNTVTWLAFWNDPINP+EFKYVFLAASS+LKGQSDKEK
Sbjct: 500 IGKGAPIPECPIPGERWKEVRHDNTVTWLAFWNDPINPREFKYVFLAASSSLKGQSDKEK 559
Query: 1033 YEKARLLKDYIQGIRTAYTRDFTSNDPTKKQIAVATYLIDKLALRAGNEKDDDEADTVGC 854
YEKAR LKDYI+GIR+AYT+DFTS DP K+QIAVATYLIDKLALRAGNEKDDDEADTVGC
Sbjct: 560 YEKARRLKDYIEGIRSAYTKDFTSKDPVKRQIAVATYLIDKLALRAGNEKDDDEADTVGC 619
Query: 853 CTLKVENVEPVPPNILKFDFLGKDSIRYQNEVEVEIAVFKAIQQFRSRKKGGDDIFDKLD 674
CTLKVENVEPVPPNILKFDFLGKDSIRYQNEV V VFKAIQ FRS KKGGDD+FDKLD
Sbjct: 620 CTLKVENVEPVPPNILKFDFLGKDSIRYQNEVAVYEPVFKAIQLFRSGKKGGDDLFDKLD 679
Query: 673 TSKLNAHLKELMPGLTAKVFRTYNASITLDDMLSRETKGGDIAQNVVVYQHANKEVAIIC 494
TSKLNAHLKELMPGLTAKVFRTYNAS+TL+ L++ T+GG++A+ V VY ANKEVAIIC
Sbjct: 680 TSKLNAHLKELMPGLTAKVFRTYNASVTLEQQLTKLTQGGELAEKVAVYNLANKEVAIIC 739
Query: 493 NHQRTVSKSHSAQMSRLNEKIDELKGVIEELRTDLARAKKGKPPLKSADGKPKRNLNPDA 314
NHQR+VSKSHS Q+S+LNEKIDELK ++EE + DLARAKKGKPPLK ADGK KRNL P+A
Sbjct: 740 NHQRSVSKSHSVQISKLNEKIDELKALLEEFKVDLARAKKGKPPLKGADGKAKRNLAPEA 799
Query: 313 LEKKIAQTTVKIEKMERDKETKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNK 134
L+KKI QT VKIE +ER ETKE+LKTVALGTSKINYLDPRITVAWCKRHEVPIEK+FNK
Sbjct: 800 LQKKIDQTNVKIENIERQIETKEELKTVALGTSKINYLDPRITVAWCKRHEVPIEKMFNK 859
Query: 133 SLLAKFAWAMDVEPGFRF 80
SLLAKFAWAMDVEP F F
Sbjct: 860 SLLAKFAWAMDVEPSFTF 877
>ref|XP_009790344.1| PREDICTED: LOW QUALITY PROTEIN: DNA topoisomerase 1-like [Nicotiana
sylvestris]
Length = 876
Score = 1081 bits (2795), Expect = 0.0
Identities = 570/856 (66%), Positives = 643/856 (75%), Gaps = 9/856 (1%)
Frame = -2
Query: 2620 QKHEQQSGRPASDVRPQNGQNNFVQKSKMVPSSKTPLDRXXXXXXXXXXXXXXXXXXXSM 2441
QK + +SGR SDVR NGQN+ QK K SSK
Sbjct: 42 QKQDGRSGRQVSDVRSPNGQNSSAQKVKAGTSSKAS---PAVSPFTSPKASPSSSRISPA 98
Query: 2440 VDSKPSTSMTNESNSVKRQIK----GESVLNETTPGPNEDLEDSEDDKPLSARLLAGQPK 2273
+S+PS S N++ +V +Q K E GPN++ EDSEDDKPLSARL +G K
Sbjct: 99 PNSRPSASAGNQAKNVNQQSKIVPNEPKQAVEPKSGPNDEAEDSEDDKPLSARLSSGLSK 158
Query: 2272 VNSGNANKVANASNFGQKSKIPKSEDSDDEMPLSSKFRVKSNAGDPTHRSSTSGEKKPLL 2093
S +ANKV S QKSK PK EDSDDE+PL+S+F++KSNAG T +SS S E KP +
Sbjct: 159 SISSHANKVLGTSASVQKSKPPKKEDSDDEIPLASRFQLKSNAGASTSKSSNSEEVKPKI 218
Query: 2092 AECRQNGSASMERKPSTVLKKRIGDSVKPADGSYLKKPKLSETSTL-----HKNKESSVI 1928
RQNG S +TVL KR P D S L + +L L + +SV
Sbjct: 219 ---RQNGLPS-----TTVLSKR-----PPGDVSLLLRLQLKSLGFLMHLHLFRLSXASVK 265
Query: 1927 SEMKEEDDEDHVPISQRMKKTASSDKKSTPVKKMTKPTPVITXXXXXXXXXXXXXXKYSG 1748
E K EDD+D VPISQR+KK+ +S K + KK TK KYS
Sbjct: 266 PEKKTEDDDDDVPISQRIKKSVASASKVSSTKKATK-----VVSSSMKTKKKLKKSKYSK 320
Query: 1747 SSKVPPSSGEGQKWTTLVHNGVIFPPPYKPHGVKMLYKGKPVDLTPEQEEVATMYAVMLE 1568
SSK+ PSSGEGQKWTTLVHNGVIFPP YKPHGVKMLYKGKP++LTPEQEEVATMYAVML+
Sbjct: 321 SSKLQPSSGEGQKWTTLVHNGVIFPPSYKPHGVKMLYKGKPINLTPEQEEVATMYAVMLD 380
Query: 1567 TEYMNKPKFKENFMSDWRKILGRNHVIQSLEHCDFTPIFEWHXXXXXXXXXXXXXXXXXX 1388
TEYM+KP+FKENFM+DWRKILG+NHVIQ+L+ CDFTPI+EWH
Sbjct: 381 TEYMSKPQFKENFMNDWRKILGKNHVIQNLDDCDFTPIYEWHQSEKEKKKQMSTEEKKAL 440
Query: 1387 XXXXXXXXXKYMWAILDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPSDITINIG 1208
KYMWAI+DGVKEKVGNFRVEPPGLFRGRGEHPKMGKLK+RIRP+DITINIG
Sbjct: 441 REEKLKQEEKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKRRIRPNDITINIG 500
Query: 1207 KDAPIPECPISGESWKEIRHDNTVTWLAFWNDPINPKEFKYVFLAASSTLKGQSDKEKYE 1028
K APIPECPI GE WKE+RHDNTVTWLAFWNDPINP+EFKYVFLAASS+LKGQSDKEKYE
Sbjct: 501 KGAPIPECPIPGERWKEVRHDNTVTWLAFWNDPINPREFKYVFLAASSSLKGQSDKEKYE 560
Query: 1027 KARLLKDYIQGIRTAYTRDFTSNDPTKKQIAVATYLIDKLALRAGNEKDDDEADTVGCCT 848
KAR LKDYI+GIR+AYT+DFTS DP K+QIAVATYLIDKLALRAGNEKDDDEADTVGCCT
Sbjct: 561 KARRLKDYIEGIRSAYTKDFTSKDPVKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCT 620
Query: 847 LKVENVEPVPPNILKFDFLGKDSIRYQNEVEVEIAVFKAIQQFRSRKKGGDDIFDKLDTS 668
LKVENVEPVPPNILKFDFLGKDSIRYQNEV V VFKAIQ FRS KKGGDD+FDKLDTS
Sbjct: 621 LKVENVEPVPPNILKFDFLGKDSIRYQNEVAVYEPVFKAIQLFRSGKKGGDDLFDKLDTS 680
Query: 667 KLNAHLKELMPGLTAKVFRTYNASITLDDMLSRETKGGDIAQNVVVYQHANKEVAIICNH 488
KLNAHLKELMPGLTAKVFRTYNAS+TL+ L++ T+GG++A+ V VY ANKEVAIICNH
Sbjct: 681 KLNAHLKELMPGLTAKVFRTYNASVTLEQQLTKLTQGGELAEKVAVYNLANKEVAIICNH 740
Query: 487 QRTVSKSHSAQMSRLNEKIDELKGVIEELRTDLARAKKGKPPLKSADGKPKRNLNPDALE 308
QR+VSKSHS Q+S+LNEKIDELK ++EE + DLARAKKGKPPLK ADGK KRNL P+AL+
Sbjct: 741 QRSVSKSHSVQISKLNEKIDELKALLEEFKVDLARAKKGKPPLKGADGKAKRNLAPEALQ 800
Query: 307 KKIAQTTVKIEKMERDKETKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSL 128
KK+ QT KIE +E+ ETKE+LKTVALGTSKINYLDPRITVAWCKRHEVPIEK+FNKSL
Sbjct: 801 KKMDQTNAKIENIEKQIETKEELKTVALGTSKINYLDPRITVAWCKRHEVPIEKMFNKSL 860
Query: 127 LAKFAWAMDVEPGFRF 80
LAKFAWAMDVEP F F
Sbjct: 861 LAKFAWAMDVEPSFTF 876
>dbj|BAG31373.1| topoisomerase I [Ophiorrhiza pumila]
Length = 926
Score = 1072 bits (2773), Expect = 0.0
Identities = 564/882 (63%), Positives = 644/882 (73%), Gaps = 35/882 (3%)
Frame = -2
Query: 2620 QKHEQQSGRPASDVRPQNGQNNFVQKSKMVPSSKTP-LDRXXXXXXXXXXXXXXXXXXXS 2444
QKH QS SDVRP NG+++ QK ++ PS++TP +
Sbjct: 46 QKHVGQSAVHTSDVRPANGESSSAQKGRIQPSAETPPVKSPLSSPKASNSSAKASPITSP 105
Query: 2443 MVDSKPSTSMTNESNSVKRQIKGESVLNETTPG-----PNEDLEDSEDDKPLSARLLAGQ 2279
+SK S S T+ + K + E P N + E S+D+KPL AR
Sbjct: 106 GANSKLSASATSTAKQQNHH-KSSAAFIEPKPSVPAAKANSNSESSDDEKPLIARTSGCS 164
Query: 2278 PKVNSGNANKVANASNFGQKSKIPKSEDSDDEMPLSSKFRVKSNAGDPTHRSSTSGEKKP 2099
K S +ANK S ++ I +SEDS+DE PLS +F KS+ G+ T +S S EKKP
Sbjct: 165 SKGKSNHANKEGGDSCSIRRPVIEESEDSEDEKPLSRRFPSKSSLGESTSKSHDSDEKKP 224
Query: 2098 LLAECRQNGSASME---RKPSTVLKKRIGDSVKPADGSYLKKPKLSETSTLHKNKESSVI 1928
L A+ +QNGSAS + K +++ KR VK + S LKKPKLS T T NK+++V
Sbjct: 225 LAAKVQQNGSASRDGPMNKSASLSNKRAPGEVKSLNQSSLKKPKLSSTITSISNKQAAVK 284
Query: 1927 SEMKEEDDEDHVPISQRMKKT-------------------------ASSDKKSTPVKKMT 1823
E K EDD+D++P+SQR KK+ AS K S PVKK +
Sbjct: 285 PEPKAEDDDDNIPLSQRGKKSQTAASKPKDEDDDNAPISQRIKKSPASVSKSSAPVKKAS 344
Query: 1822 KPTPVITXXXXXXXXXXXXXXKYSGSSKVPPSSGEGQKWTTLVHNGVIFPPPYKPHGVKM 1643
Y+ SSKVPP SGEGQKWTTLVHNGV+FPPPYKPHGVKM
Sbjct: 345 TVVSPSLKKVNKKSKKVIKKTAYTKSSKVPPGSGEGQKWTTLVHNGVMFPPPYKPHGVKM 404
Query: 1642 LYKGKPVDLTPEQEEVATMYAVMLETEYMNKPKFKENFMSDWRKILGRNHVIQSLEHCDF 1463
LYK +P+ LTPEQEEVATM+A ML+T+YMNKP+FKENF SDW+KILG+NH IQ+LE CDF
Sbjct: 405 LYKRQPLTLTPEQEEVATMFAAMLDTDYMNKPRFKENFFSDWKKILGKNHTIQNLEDCDF 464
Query: 1462 TPIFEWHXXXXXXXXXXXXXXXXXXXXXXXXXXXKYMWAILDGVKEKVGNFRVEPPGLFR 1283
PI+EWH KYMWAI+DGVKEKVGNFRVEPPGLFR
Sbjct: 465 GPIYEWHQQEKEKKKQMTTEEKKALKEERLQLEEKYMWAIVDGVKEKVGNFRVEPPGLFR 524
Query: 1282 GRGEHPKMGKLKKRIRPSDITINIGKDAPIPECPISGESWKEIRHDNTVTWLAFWNDPIN 1103
GRGEHPK+GKLKKRIRP DITINIGKDAPIPECPI GE WKE+R+DNTVTWLA+WNDP+N
Sbjct: 525 GRGEHPKVGKLKKRIRPRDITINIGKDAPIPECPIPGERWKEVRNDNTVTWLAYWNDPVN 584
Query: 1102 PKEFKYVFLAASSTLKGQSDKEKYEKARLLKDYIQGIRTAYTRDFTSN-DPTKKQIAVAT 926
KE KYVFLAASSTLKGQSDKEKYEKARLLKDYI GIR AYT+DFT+N DP KKQ+AVAT
Sbjct: 585 LKECKYVFLAASSTLKGQSDKEKYEKARLLKDYIHGIRAAYTKDFTNNKDPMKKQVAVAT 644
Query: 925 YLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPNILKFDFLGKDSIRYQNEVEVEI 746
YLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPNILK DF+GKDSIRYQNEV+VE
Sbjct: 645 YLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPNILKIDFIGKDSIRYQNEVQVEP 704
Query: 745 AVFKAIQQFRSRKKGGDDIFDKLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDMLSRE 566
AVFKAIQQFRS K+G +D+FD+LDTSKLNAHLKELMPGLTAKVFRTYNASITLDDMLS+E
Sbjct: 705 AVFKAIQQFRSGKEGSEDLFDRLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDMLSKE 764
Query: 565 TKGGDIAQNVVVYQHANKEVAIICNHQRTVSKSHSAQMSRLNEKIDELKGVIEELRTDLA 386
TKGG +A+ V VYQ ANKEVAIICNHQRTVSKSHSAQMSRLNEKIDELK +EEL+TDL+
Sbjct: 765 TKGGKVAEKVGVYQRANKEVAIICNHQRTVSKSHSAQMSRLNEKIDELKTALEELKTDLS 824
Query: 385 RAKKGKPPLKSADGKPKRNLNPDALEKKIAQTTVKIEKMERDKETKEDLKTVALGTSKIN 206
RAKKGKPP K DG+PKRNLNP+ALE+KIAQT KIEKMERDK+TKEDLK VAL TSKI+
Sbjct: 825 RAKKGKPPSKGDDGEPKRNLNPEALERKIAQTNAKIEKMERDKKTKEDLKAVALSTSKIS 884
Query: 205 YLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMDVEPGFRF 80
YLDPRITVAWCKR EVPIEK+FNKSLLAKFAWAMDV+P FRF
Sbjct: 885 YLDPRITVAWCKRQEVPIEKMFNKSLLAKFAWAMDVDPSFRF 926
>dbj|BAG31374.1| topoisomerase I [Ophiorrhiza liukiuensis]
Length = 926
Score = 1071 bits (2769), Expect = 0.0
Identities = 565/882 (64%), Positives = 643/882 (72%), Gaps = 35/882 (3%)
Frame = -2
Query: 2620 QKHEQQSGRPASDVRPQNGQNNFVQKSKMVPSSKTP-LDRXXXXXXXXXXXXXXXXXXXS 2444
QKH QS SDVRP NG+++ QK ++ PS++TP +
Sbjct: 46 QKHVGQSAVHTSDVRPANGESSSAQKGRIQPSAETPPVKSPLSSPKASNSSAKASPITSP 105
Query: 2443 MVDSKPSTSMTNESNSVKRQIKGESVLNETTPG-----PNEDLEDSEDDKPLSARLLAGQ 2279
+SK S S T+ + K + E P N + E S+D+KPL AR
Sbjct: 106 GANSKLSASATSTAKQQNHH-KSSAAFIEPKPSVPAAKANSNSESSDDEKPLIARTSGCS 164
Query: 2278 PKVNSGNANKVANASNFGQKSKIPKSEDSDDEMPLSSKFRVKSNAGDPTHRSSTSGEKKP 2099
K S +ANK S ++ I +SEDS+DE PLS +F KS+ G+ T +S S EKKP
Sbjct: 165 SKGKSNHANKEGGDSCSIRRPVIEESEDSEDEKPLSRRFPSKSSLGESTSKSYDSDEKKP 224
Query: 2098 LLAECRQNGSASME---RKPSTVLKKRIGDSVKPADGSYLKKPKLSETSTLHKNKESSVI 1928
L + +QNGSAS + K +++L KR VK + S LKK KLS T NK+++V
Sbjct: 225 LATKVQQNGSASRDGPMNKSASLLNKRAPGEVKSLNQSSLKKAKLSSPITSISNKQAAVK 284
Query: 1927 SEMKEEDDEDHVPISQRMKKT-------------------------ASSDKKSTPVKKMT 1823
E K EDD+D++P+SQR KK+ AS K S PVKK +
Sbjct: 285 PEPKAEDDDDNIPLSQRGKKSQTAASKPKDEDDDNAPISQRIKKSPASVSKSSAPVKKAS 344
Query: 1822 KPTPVITXXXXXXXXXXXXXXKYSGSSKVPPSSGEGQKWTTLVHNGVIFPPPYKPHGVKM 1643
Y+ SSKVPP SGEGQKWTTLVHNGV+F PPYKPHGVKM
Sbjct: 345 TVVSPSLKKVNKKSKKVIKKTAYTKSSKVPPGSGEGQKWTTLVHNGVMFLPPYKPHGVKM 404
Query: 1642 LYKGKPVDLTPEQEEVATMYAVMLETEYMNKPKFKENFMSDWRKILGRNHVIQSLEHCDF 1463
LYK +P+ LTPEQEEVATM+AVML+T+YM KP+FKENF SDW+K+LG+NH +Q+LE CDF
Sbjct: 405 LYKXQPLTLTPEQEEVATMFAVMLDTDYMTKPRFKENFFSDWKKMLGKNHTVQNLEDCDF 464
Query: 1462 TPIFEWHXXXXXXXXXXXXXXXXXXXXXXXXXXXKYMWAILDGVKEKVGNFRVEPPGLFR 1283
PI+EWH KYMWAI+DGVKEKVGNFRVEPPGLFR
Sbjct: 465 GPIYEWHQQEKEKRKQMTTEEKKALKEERLQQEEKYMWAIVDGVKEKVGNFRVEPPGLFR 524
Query: 1282 GRGEHPKMGKLKKRIRPSDITINIGKDAPIPECPISGESWKEIRHDNTVTWLAFWNDPIN 1103
GRGEHPKMGKLKKRIRP DITINIGKDAPIPECPI GE WKE+R+DNTVTWLAFWNDPIN
Sbjct: 525 GRGEHPKMGKLKKRIRPRDITINIGKDAPIPECPIPGERWKEVRNDNTVTWLAFWNDPIN 584
Query: 1102 PKEFKYVFLAASSTLKGQSDKEKYEKARLLKDYIQGIRTAYTRDFTSN-DPTKKQIAVAT 926
KE KYVFLAASSTLKGQSDKEKYEKARLLKDYI GIR AYT+DFT+N DP KKQIAVAT
Sbjct: 585 QKECKYVFLAASSTLKGQSDKEKYEKARLLKDYIHGIRAAYTKDFTNNKDPMKKQIAVAT 644
Query: 925 YLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPNILKFDFLGKDSIRYQNEVEVEI 746
YLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPNILK DF+GKDSIRYQNEV+VE
Sbjct: 645 YLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPNILKIDFIGKDSIRYQNEVQVEP 704
Query: 745 AVFKAIQQFRSRKKGGDDIFDKLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDMLSRE 566
AVFKAIQQFRS K+G D+FD+LDTSKLNAHLKELMPGLTAKVFRTYNASITLDDMLS+E
Sbjct: 705 AVFKAIQQFRSGKEGCADLFDRLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDMLSKE 764
Query: 565 TKGGDIAQNVVVYQHANKEVAIICNHQRTVSKSHSAQMSRLNEKIDELKGVIEELRTDLA 386
TKGG +A+ V VYQHANKEVAIICNHQRTVSKSHSAQMSRLNEKIDELK +EEL+TDL+
Sbjct: 765 TKGGKVAEKVGVYQHANKEVAIICNHQRTVSKSHSAQMSRLNEKIDELKTALEELKTDLS 824
Query: 385 RAKKGKPPLKSADGKPKRNLNPDALEKKIAQTTVKIEKMERDKETKEDLKTVALGTSKIN 206
RAKKGKPP K ADG+PKRNLNP++LE+KIAQT KIEKMERDK+TKEDLK VAL TSKI+
Sbjct: 825 RAKKGKPPAKGADGEPKRNLNPESLERKIAQTNAKIEKMERDKKTKEDLKAVALSTSKIS 884
Query: 205 YLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMDVEPGFRF 80
YLDPRITVAWCKRHEVPIEKIFNKSLLAKFAW+MDV+P FRF
Sbjct: 885 YLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWSMDVDPSFRF 926
>dbj|BAK32956.1| topoisomerase I [Ophiorrhiza fucosa]
Length = 926
Score = 1069 bits (2764), Expect = 0.0
Identities = 562/882 (63%), Positives = 642/882 (72%), Gaps = 35/882 (3%)
Frame = -2
Query: 2620 QKHEQQSGRPASDVRPQNGQNNFVQKSKMVPSSKTP-LDRXXXXXXXXXXXXXXXXXXXS 2444
QKH QS SDVRP NG+++ QK ++ PS++TP +
Sbjct: 46 QKHVGQSAVHTSDVRPANGESSSAQKGRIQPSAETPPVKSPLSSPKASNSSAKASPITSP 105
Query: 2443 MVDSKPSTSMTNESNSVKRQIKGESVLNETTPG-----PNEDLEDSEDDKPLSARLLAGQ 2279
+SK S S T+ + K + E P N + E S+D+KPL AR
Sbjct: 106 GANSKLSASATSTAKQQNHH-KSSAAFIEPKPSVPPAKANSNSESSDDEKPLIARTSGCS 164
Query: 2278 PKVNSGNANKVANASNFGQKSKIPKSEDSDDEMPLSSKFRVKSNAGDPTHRSSTSGEKKP 2099
K S +ANK S ++ + +SEDS+DE PLS +F KS+ G+ T +S S EKKP
Sbjct: 165 SKGKSNHANKEGGDSCSIRRPVVEESEDSEDEKPLSRRFPSKSSLGESTSKSYDSDEKKP 224
Query: 2098 LLAECRQNGSASME---RKPSTVLKKRIGDSVKPADGSYLKKPKLSETSTLHKNKESSVI 1928
L A+ +QNGSAS + K +++ KR VK + S LKKPKLS T NK+++V
Sbjct: 225 LAAKVQQNGSASRDGPMNKSASLSNKRAPGEVKSLNQSSLKKPKLSSPITSISNKQAAVK 284
Query: 1927 SEMKEEDDEDHVPISQRMKKT-------------------------ASSDKKSTPVKKMT 1823
E K EDD+D++P+SQR KK+ AS K S PVKK +
Sbjct: 285 PEPKAEDDDDNIPLSQRGKKSQTAASKPKDEDDDNAPISQRIKKSPASVSKSSAPVKKAS 344
Query: 1822 KPTPVITXXXXXXXXXXXXXXKYSGSSKVPPSSGEGQKWTTLVHNGVIFPPPYKPHGVKM 1643
Y+ SSKVPP SGEGQKWTTLVHNGV+FPPPYKPHGVKM
Sbjct: 345 TVVSPSLKKVNKKSKKVIKKTAYTKSSKVPPGSGEGQKWTTLVHNGVMFPPPYKPHGVKM 404
Query: 1642 LYKGKPVDLTPEQEEVATMYAVMLETEYMNKPKFKENFMSDWRKILGRNHVIQSLEHCDF 1463
LYK +P+ LTPEQEEVATM+A ML+T+YMNKP+FKENF SDW+KILG+NH IQ+LE CDF
Sbjct: 405 LYKRQPLTLTPEQEEVATMFAAMLDTDYMNKPRFKENFFSDWKKILGKNHTIQNLEDCDF 464
Query: 1462 TPIFEWHXXXXXXXXXXXXXXXXXXXXXXXXXXXKYMWAILDGVKEKVGNFRVEPPGLFR 1283
PI+EWH KYMWAI+DGVKEKVGNFRVEPPGLFR
Sbjct: 465 GPIYEWHQQEREKKKQMTTEEKKALKDERLQLEEKYMWAIVDGVKEKVGNFRVEPPGLFR 524
Query: 1282 GRGEHPKMGKLKKRIRPSDITINIGKDAPIPECPISGESWKEIRHDNTVTWLAFWNDPIN 1103
GRGEHPK+GKLKKRI P DITINIGKDAPIPECPI GE WKE+R+DNTVTWLA+WNDP+N
Sbjct: 525 GRGEHPKVGKLKKRIHPRDITINIGKDAPIPECPIPGERWKEVRNDNTVTWLAYWNDPVN 584
Query: 1102 PKEFKYVFLAASSTLKGQSDKEKYEKARLLKDYIQGIRTAYTRDFTSN-DPTKKQIAVAT 926
KE KYVFLA SSTLKGQSDKEKYEKARLLKDYI GIR AYT+DFT+N DP KKQIAVAT
Sbjct: 585 LKECKYVFLAPSSTLKGQSDKEKYEKARLLKDYIHGIRAAYTKDFTNNKDPMKKQIAVAT 644
Query: 925 YLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPNILKFDFLGKDSIRYQNEVEVEI 746
YLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPNILK DF+GKDSIRYQNEV+VE
Sbjct: 645 YLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPNILKIDFIGKDSIRYQNEVQVEP 704
Query: 745 AVFKAIQQFRSRKKGGDDIFDKLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDMLSRE 566
AVFKAIQQFRS K+G +D+FD+LDTSKLNAHLKELMPGLTAKVFRTYNASITLDDMLS+E
Sbjct: 705 AVFKAIQQFRSGKEGSEDLFDRLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDMLSKE 764
Query: 565 TKGGDIAQNVVVYQHANKEVAIICNHQRTVSKSHSAQMSRLNEKIDELKGVIEELRTDLA 386
TKGG +A+ V VYQHANKEVAIICNHQRTVSKSHSAQMSRLNEKIDELK +EEL+TDL+
Sbjct: 765 TKGGKVAEKVGVYQHANKEVAIICNHQRTVSKSHSAQMSRLNEKIDELKTALEELKTDLS 824
Query: 385 RAKKGKPPLKSADGKPKRNLNPDALEKKIAQTTVKIEKMERDKETKEDLKTVALGTSKIN 206
RAKKGKPP K DG+PKRNLNP+ALE+KIAQT KIEKMERDK+TKEDLK VAL TSKI+
Sbjct: 825 RAKKGKPPSKGDDGEPKRNLNPEALERKIAQTNAKIEKMERDKKTKEDLKAVALSTSKIS 884
Query: 205 YLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMDVEPGFRF 80
YLDPRITVAWCKR EVPIEK+FNKSLLAKFAWAMDV+P FRF
Sbjct: 885 YLDPRITVAWCKRQEVPIEKMFNKSLLAKFAWAMDVDPSFRF 926
>gb|KHG20024.1| DNA topoisomerase 1 -like protein [Gossypium arboreum]
Length = 903
Score = 1068 bits (2761), Expect = 0.0
Identities = 557/859 (64%), Positives = 652/859 (75%), Gaps = 12/859 (1%)
Frame = -2
Query: 2620 QKHEQQSGRPASDVRPQNGQNNFVQKSKMVPSSKTPLDRXXXXXXXXXXXXXXXXXXXS- 2444
Q+ + QSGR AS VR NGQN+ Q +K +P SK+P R S
Sbjct: 47 QRSDGQSGRQASSVRAPNGQNSVAQTNKSIPPSKSPPIRSPILSPKSSNSSSKASPVRSP 106
Query: 2443 MVDSKPSTSMTNESNSVKRQIKGESVLNETTP-----GPNEDLEDSEDDKPLSARLLAGQ 2279
+V SK STS ++S +Q K +V E +P N D +D +D KPLSARL
Sbjct: 107 VVSSKASTSFNDQSKQASKQNKFTAVKEEKSPIKRTDETNSDDDDDDDSKPLSARLKGIS 166
Query: 2278 PKVNSG-NANKVANASNFGQKSKIPKS-EDSDDEMPLSSKFRVKSNAGDPTHRSSTSGEK 2105
+ N G + + A + F K ++ S ED DD+ PLS++F KSN G + + S EK
Sbjct: 167 SQGNKGVSTSTPAQSQRFVPKIEVKGSAEDPDDDAPLSARFSTKSNTGTSSSKPYGSHEK 226
Query: 2104 KPLLAECRQNGSASM--ERKPSTVLKKRIGDSVKPADGSYLKKPKLSETSTLHKNKESSV 1931
KPL ++ +QNGS ++K S + KR D +D SY KKPK+S+T T+ K K+ +V
Sbjct: 227 KPLASKIQQNGSIMKVKQQKSSMLSDKRPLDKGNSSDQSYAKKPKISDTPTMMKTKQVTV 286
Query: 1930 ISEMKEEDDEDHVPISQRMKKTASSDKKSTPVK-KMTKPTPVITXXXXXXXXXXXXXXKY 1754
+E ++D++DH+PISQR+KK+ SS K++ VK K TK KY
Sbjct: 287 KAE--KDDEDDHIPISQRIKKSVSSVSKASSVKQKATKVVSSSFKKINKKSKKDMKKSKY 344
Query: 1753 SGSSKVPPSSGEGQK-WTTLVHNGVIFPPPYKPHGVKMLYKGKPVDLTPEQEEVATMYAV 1577
S S+K+ PSSG+GQK W+TLVHNGVIFPPPYKPHGVKMLY G+PVDLTPEQEEVATM+AV
Sbjct: 345 SKSTKLSPSSGDGQKKWSTLVHNGVIFPPPYKPHGVKMLYDGRPVDLTPEQEEVATMFAV 404
Query: 1576 MLETEYMNKPKFKENFMSDWRKILGRNHVIQSLEHCDFTPIFEWHXXXXXXXXXXXXXXX 1397
M ET+YM+KP+FK+NF DW K+LGRNHVI+SL+ CDFTPI+EWH
Sbjct: 405 MQETDYMSKPQFKKNFWEDWSKLLGRNHVIKSLDKCDFTPIYEWHLQEKEKKKQMSSEEK 464
Query: 1396 XXXXXXXXXXXXKYMWAILDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPSDITI 1217
KYMWAI+DGVKEKVGNFRVEPPGLFRGRGEHPKMGKLK+RIRP DITI
Sbjct: 465 KALKEEKLMQEEKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKRRIRPCDITI 524
Query: 1216 NIGKDAPIPECPISGESWKEIRHDNTVTWLAFWNDPINPKEFKYVFLAASSTLKGQSDKE 1037
NIGKDAPIPECPI GE WK+I+HDNTVTWLAFWNDPINPKEFKYVFLAASS+LKGQSDKE
Sbjct: 525 NIGKDAPIPECPIPGERWKDIKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKE 584
Query: 1036 KYEKARLLKDYIQGIRTAYTRDFTSNDPTKKQIAVATYLIDKLALRAGNEKDDDEADTVG 857
KYEKARLLKDYI+ IR AYT+DFT+ D TK+QIAVATYLIDKLALRAGNEKDDDEADTVG
Sbjct: 585 KYEKARLLKDYIKNIRAAYTKDFTAKDVTKRQIAVATYLIDKLALRAGNEKDDDEADTVG 644
Query: 856 CCTLKVENVEPVPPNILKFDFLGKDSIRYQNEVEVEIAVFKAIQQFRSRKKGGDDIFDKL 677
CCTLKV NVE +PPN LKFDFLGKDSI+Y N VEVE+ V+KAI QF++ K DD+FD+L
Sbjct: 645 CCTLKVGNVECIPPNKLKFDFLGKDSIQYVNTVEVELPVYKAIGQFQTGKSKSDDLFDEL 704
Query: 676 DTSKLNAHLKELMPGLTAKVFRTYNASITLDDMLSRETKGGDIAQNVVVYQHANKEVAII 497
DTSKLNAHLKELMPGLTAKVFRT+NASITLDDML++ETK GD+A+ VV+YQ ANKEVAII
Sbjct: 705 DTSKLNAHLKELMPGLTAKVFRTFNASITLDDMLNKETKDGDVAEKVVIYQRANKEVAII 764
Query: 496 CNHQRTVSKSHSAQMSRLNEKIDELKGVIEELRTDLARAKKGKPPLKSADGKPKRNLNPD 317
CNHQR++SKSHSAQMSRL EKI+ELKG+++EL+TDL RAKKGKPPLK ADGK KRNL P+
Sbjct: 765 CNHQRSISKSHSAQMSRLTEKINELKGLVKELKTDLDRAKKGKPPLKDADGKQKRNLTPE 824
Query: 316 ALEKKIAQTTVKIEKMERDKETKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFN 137
A+EKKIAQT VKIEKMERD +TKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFN
Sbjct: 825 AIEKKIAQTNVKIEKMERDMQTKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFN 884
Query: 136 KSLLAKFAWAMDVEPGFRF 80
KSLLAKFAWAMDV+P FRF
Sbjct: 885 KSLLAKFAWAMDVDPDFRF 903
>dbj|BAK32961.1| topoisomerase I [Ophiorrhiza ridleyana]
Length = 926
Score = 1068 bits (2761), Expect = 0.0
Identities = 563/882 (63%), Positives = 642/882 (72%), Gaps = 35/882 (3%)
Frame = -2
Query: 2620 QKHEQQSGRPASDVRPQNGQNNFVQKSKMVPSSKTP-LDRXXXXXXXXXXXXXXXXXXXS 2444
QKH QS SDVRP NG+++ QK ++ PS++TP +
Sbjct: 46 QKHVGQSAVHTSDVRPANGESSSAQKGRIQPSAETPPVKSPLSSPKASNSSAKASPITSP 105
Query: 2443 MVDSKPSTSMTNESNSVKRQIKGESVLNETTPG-----PNEDLEDSEDDKPLSARLLAGQ 2279
+SK S S T+ + K + E P N + E S+D+KPL AR
Sbjct: 106 GANSKLSASATSTAKQQNHH-KSSAAFIEPKPSVPAAKANSNSESSDDEKPLIARTSGCS 164
Query: 2278 PKVNSGNANKVANASNFGQKSKIPKSEDSDDEMPLSSKFRVKSNAGDPTHRSSTSGEKKP 2099
S +ANK S ++ I +SEDS+DE PLS +F KS+ G+ T +S S EKKP
Sbjct: 165 SMGKSNHANKEGGDSCSIRRPVIEESEDSEDEKPLSRRFPSKSSLGESTSKSYDSDEKKP 224
Query: 2098 LLAECRQNGSASME---RKPSTVLKKRIGDSVKPADGSYLKKPKLSETSTLHKNKESSVI 1928
L A+ +QNGSAS E K +++ KR VK + S LKKPKLS T NK+++V
Sbjct: 225 LAAKVQQNGSASPEGPMNKSASLSNKRAPGEVKSLNQSSLKKPKLSSPITSISNKQAAVK 284
Query: 1927 SEMKEEDDEDHVPISQRMKKT-------------------------ASSDKKSTPVKKMT 1823
E K EDD+D++P+SQR KK+ S K S PVKK +
Sbjct: 285 PEPKAEDDDDNIPLSQRGKKSQTAASKPKDEDDDHAPISQRIKKSPVSVSKSSAPVKKAS 344
Query: 1822 KPTPVITXXXXXXXXXXXXXXKYSGSSKVPPSSGEGQKWTTLVHNGVIFPPPYKPHGVKM 1643
Y+ SSKVPP SGEGQKWTTLVHNGV+FPPPYKPHGVKM
Sbjct: 345 TVVSTSLKKVNKKSKKVIRKTAYTKSSKVPPGSGEGQKWTTLVHNGVMFPPPYKPHGVKM 404
Query: 1642 LYKGKPVDLTPEQEEVATMYAVMLETEYMNKPKFKENFMSDWRKILGRNHVIQSLEHCDF 1463
LYK +P+ LTPEQEEVATM+AVML+T+YMNKP+FKENF SDW+KILG+NH IQ+LE CDF
Sbjct: 405 LYKRQPLTLTPEQEEVATMFAVMLDTDYMNKPRFKENFFSDWKKILGKNHTIQNLEDCDF 464
Query: 1462 TPIFEWHXXXXXXXXXXXXXXXXXXXXXXXXXXXKYMWAILDGVKEKVGNFRVEPPGLFR 1283
PI+EWH KYMWAI+DGVKEKVGNFRVEPPGLFR
Sbjct: 465 GPIYEWHQQEKEKKKQMTTEEKKALKEERLQQEEKYMWAIVDGVKEKVGNFRVEPPGLFR 524
Query: 1282 GRGEHPKMGKLKKRIRPSDITINIGKDAPIPECPISGESWKEIRHDNTVTWLAFWNDPIN 1103
GRGEHPK+GKLKKRIRP DITINIGKDAPIPECPI GE WKE+R+DNTVTWLA+WNDP+N
Sbjct: 525 GRGEHPKVGKLKKRIRPRDITINIGKDAPIPECPIPGERWKEVRNDNTVTWLAYWNDPVN 584
Query: 1102 PKEFKYVFLAASSTLKGQSDKEKYEKARLLKDYIQGIRTAYTRDFTSN-DPTKKQIAVAT 926
KE KYVFLAASSTLKGQS KEKYEKAR+LKDYI GIR AYT+ FT+N DP KKQIAVAT
Sbjct: 585 IKECKYVFLAASSTLKGQSVKEKYEKARVLKDYIHGIRAAYTKGFTNNKDPMKKQIAVAT 644
Query: 925 YLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPNILKFDFLGKDSIRYQNEVEVEI 746
YLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPNILK DF+GKDSIRYQNEV+VE
Sbjct: 645 YLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPNILKIDFIGKDSIRYQNEVQVEP 704
Query: 745 AVFKAIQQFRSRKKGGDDIFDKLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDMLSRE 566
AVFKAIQQFRS K+G +D+FD+LDTSKLNAHLKELMPGLTAKVFRTYNASITLDDMLS+E
Sbjct: 705 AVFKAIQQFRSGKEGSEDLFDRLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDMLSKE 764
Query: 565 TKGGDIAQNVVVYQHANKEVAIICNHQRTVSKSHSAQMSRLNEKIDELKGVIEELRTDLA 386
TKGG IA+ V VYQHANKEVAIICNHQRTVSKSHSAQMSRLNEKIDELK +EEL+TDL+
Sbjct: 765 TKGGKIAEKVAVYQHANKEVAIICNHQRTVSKSHSAQMSRLNEKIDELKTALEELKTDLS 824
Query: 385 RAKKGKPPLKSADGKPKRNLNPDALEKKIAQTTVKIEKMERDKETKEDLKTVALGTSKIN 206
RAKKGKPP K ADG+PKRNLNP++LE+KIAQT KIEKMERDK+TKEDLK VAL TSKI+
Sbjct: 825 RAKKGKPPSKDADGEPKRNLNPESLERKIAQTNAKIEKMERDKKTKEDLKAVALSTSKIS 884
Query: 205 YLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMDVEPGFRF 80
YLDPRITVAWCKR EVPIEK+FNKSLLAKFAWAMDV+P FRF
Sbjct: 885 YLDPRITVAWCKRQEVPIEKMFNKSLLAKFAWAMDVDPSFRF 926
>ref|XP_012443903.1| PREDICTED: DNA topoisomerase 1-like [Gossypium raimondii]
gi|823222380|ref|XP_012443904.1| PREDICTED: DNA
topoisomerase 1-like [Gossypium raimondii]
gi|823222382|ref|XP_012443905.1| PREDICTED: DNA
topoisomerase 1-like [Gossypium raimondii]
gi|823222384|ref|XP_012443906.1| PREDICTED: DNA
topoisomerase 1-like [Gossypium raimondii]
gi|823222386|ref|XP_012443907.1| PREDICTED: DNA
topoisomerase 1-like [Gossypium raimondii]
gi|823222388|ref|XP_012443908.1| PREDICTED: DNA
topoisomerase 1-like [Gossypium raimondii]
gi|823222390|ref|XP_012443909.1| PREDICTED: DNA
topoisomerase 1-like [Gossypium raimondii]
gi|823222392|ref|XP_012443910.1| PREDICTED: DNA
topoisomerase 1-like [Gossypium raimondii]
gi|763795950|gb|KJB62946.1| hypothetical protein
B456_009G444700 [Gossypium raimondii]
gi|763795951|gb|KJB62947.1| hypothetical protein
B456_009G444700 [Gossypium raimondii]
gi|763795953|gb|KJB62949.1| hypothetical protein
B456_009G444700 [Gossypium raimondii]
Length = 901
Score = 1058 bits (2736), Expect = 0.0
Identities = 556/863 (64%), Positives = 651/863 (75%), Gaps = 16/863 (1%)
Frame = -2
Query: 2620 QKHEQQSGRPASDVRPQNGQNNFVQKSKMVPSSKTPLDRXXXXXXXXXXXXXXXXXXXS- 2444
Q+ + QSGR AS V+ NGQN+ +K + SK+P R S
Sbjct: 47 QRSDGQSGRQASSVQAPNGQNSVAWTNKSILPSKSPPTRSPILSPKSSNSSAKASPVRSP 106
Query: 2443 MVDSKPSTSMTNESNSVKRQ-----IKGESVLNETTPGPNEDLEDSEDDKPLSARLLAGQ 2279
+V SK STS++++S +Q +K E L + T N D ED +D KPLSARL
Sbjct: 107 VVSSKASTSLSDQSKQALKQNKFTAVKEEKRLIKCTDETNSD-EDDDDSKPLSARL---- 161
Query: 2278 PKVNSGNANKVANASNFGQKSK-IPK------SEDSDDEMPLSSKFRVKSNAGDPTHRSS 2120
K S NK + S Q + +PK +ED DD+ PLS++F +KSN G + +
Sbjct: 162 -KGISSQGNKGVSTSTPAQSQRLVPKIEVKGSAEDPDDDAPLSARFSMKSNTGTSSSKPY 220
Query: 2119 TSGEKKPLLAECRQNGSASMER--KPSTVLKKRIGDSVKPADGSYLKKPKLSETSTLHKN 1946
S EKKPL ++ +QNGS ++ K S + KR D +D SY KKPK+S+T T K
Sbjct: 221 GSHEKKPLPSKIQQNGSIMKDKQQKCSVLSDKRPLDKGNSSDQSYAKKPKISDTPTTMKT 280
Query: 1945 KESSVISEMKEEDDEDHVPISQRMKKTASSDKKSTPVKKMTKPTPVITXXXXXXXXXXXX 1766
K+ +V +E ++D++DH+PISQR+KK+ SS K++ VK+ +
Sbjct: 281 KQVTVKAE--KDDEDDHIPISQRIKKSVSSVSKTSSVKQKATKVVSSSFKKINKSKKDMK 338
Query: 1765 XXKYSGSSKVPPSSGEGQK-WTTLVHNGVIFPPPYKPHGVKMLYKGKPVDLTPEQEEVAT 1589
KYS S+K+ PSSG+GQK W+TLVHNGVIFPPPYKPHGVKMLY G+PVDLTPEQEEVAT
Sbjct: 339 KSKYSKSTKLSPSSGDGQKKWSTLVHNGVIFPPPYKPHGVKMLYDGQPVDLTPEQEEVAT 398
Query: 1588 MYAVMLETEYMNKPKFKENFMSDWRKILGRNHVIQSLEHCDFTPIFEWHXXXXXXXXXXX 1409
M+AVM ET+YM+KP+FK+NF DW K+LGRNHVI+SL+ CDFTPI+EWH
Sbjct: 399 MFAVMQETDYMSKPQFKKNFWEDWSKLLGRNHVIKSLDKCDFTPIYEWHLQEKEKKKQMS 458
Query: 1408 XXXXXXXXXXXXXXXXKYMWAILDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPS 1229
KYMWAI+DGVKEKVGNFRVEPPGLFRGRGEHPKMGKLK+RIRP
Sbjct: 459 SEEKKALKEEKLKQEEKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKRRIRPC 518
Query: 1228 DITINIGKDAPIPECPISGESWKEIRHDNTVTWLAFWNDPINPKEFKYVFLAASSTLKGQ 1049
DITINIGKDAPIPECPI GE WK+I+HDNTVTWLAFWNDPINPKEFKYVFLAASS+LKGQ
Sbjct: 519 DITINIGKDAPIPECPIPGERWKDIKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQ 578
Query: 1048 SDKEKYEKARLLKDYIQGIRTAYTRDFTSNDPTKKQIAVATYLIDKLALRAGNEKDDDEA 869
SDKEKYEKARLLKDYI+ IR AYT+DFT+ D TK+QIAVATYLIDKLALRAGNEKDDDEA
Sbjct: 579 SDKEKYEKARLLKDYIKNIRAAYTKDFTAKDVTKRQIAVATYLIDKLALRAGNEKDDDEA 638
Query: 868 DTVGCCTLKVENVEPVPPNILKFDFLGKDSIRYQNEVEVEIAVFKAIQQFRSRKKGGDDI 689
DTVGCCTLKV NVE +PPN LKFDFLGKDSI+Y N VEVE+ V+KAI QF++RK DD+
Sbjct: 639 DTVGCCTLKVGNVECIPPNKLKFDFLGKDSIQYVNTVEVELPVYKAIGQFQTRKSKSDDL 698
Query: 688 FDKLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDMLSRETKGGDIAQNVVVYQHANKE 509
FD+LDTSKLNAHLKELMPGLTAKVFRTYNASITLDDML++ET+ GD+A+ VV+YQ ANKE
Sbjct: 699 FDELDTSKLNAHLKELMPGLTAKVFRTYNASITLDDMLNQETEDGDVAEKVVIYQRANKE 758
Query: 508 VAIICNHQRTVSKSHSAQMSRLNEKIDELKGVIEELRTDLARAKKGKPPLKSADGKPKRN 329
VAIICNHQR++SKSHSAQMSRL EKI ELKGV++EL+TDL RAKKGKPPLK ADGK KRN
Sbjct: 759 VAIICNHQRSISKSHSAQMSRLTEKITELKGVLKELKTDLDRAKKGKPPLKDADGKQKRN 818
Query: 328 LNPDALEKKIAQTTVKIEKMERDKETKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIE 149
L P+A+EKKIAQT VKIEKMERD +TKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIE
Sbjct: 819 LTPEAIEKKIAQTNVKIEKMERDMQTKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIE 878
Query: 148 KIFNKSLLAKFAWAMDVEPGFRF 80
KIFNKSLLAKFAWAMDV+P FRF
Sbjct: 879 KIFNKSLLAKFAWAMDVDPDFRF 901
>ref|XP_006364175.1| PREDICTED: LOW QUALITY PROTEIN: DNA topoisomerase 1-like [Solanum
tuberosum]
Length = 905
Score = 1057 bits (2734), Expect = 0.0
Identities = 562/878 (64%), Positives = 642/878 (73%), Gaps = 31/878 (3%)
Frame = -2
Query: 2620 QKHEQQSGRPASDVRPQNGQNNFVQKSKMVPSSKT-------------PLDRXXXXXXXX 2480
QK + +SGR DVR NGQ++ K K SSK PL
Sbjct: 42 QKQDGRSGRQVPDVRSPNGQSSSTHKVKTAASSKASPAVSPLTSPKAAPLSSRTSPAPNF 101
Query: 2479 XXXXXXXXXXXSMVDSK--------PSTSMTNESNSVKRQI----KGESVLNETTPGPNE 2336
+S+ PS+S N++ +V +Q K E PN+
Sbjct: 102 RTSPAPNSRTPPAPNSRTSPAPNSRPSSSAGNQAKNVNQQSNIAPKESKQAIEPKSEPND 161
Query: 2335 DLEDSEDDKPLSARLLAGQPKVNSGNANKVANASNFGQKSKIPKSEDSDDEMPLSSKFRV 2156
+ EDSEDDKPLSAR+ +G K NS +AN V S QKS+ PK EDSDDE+PL+S+F++
Sbjct: 162 EAEDSEDDKPLSARVPSGLSKSNSIHANNVLGTSTSVQKSRPPKKEDSDDEIPLASRFQM 221
Query: 2155 KSNAGDPTHRSSTSGEKKPLLAECRQNGSASMERKPSTVLKKRIGDSVKPADGSYLKKPK 1976
KS+AG T + S+S E KP + RQNG S +TVL KR P + S L + +
Sbjct: 222 KSSAGASTSKFSSSEEVKPKI---RQNGLPS-----ATVLSKR-----PPGEVSLLLRLQ 268
Query: 1975 LSETSTL-HKN----KESSVISEMKEEDDEDHVPISQRMKKT-ASSDKKSTPVKKMTKPT 1814
L L H + SV +E K EDD+D VP+SQR+KK AS+ ++ V + K T
Sbjct: 269 LKSLDFLMHLHLFLVSNXSVKTEKKTEDDDDEVPLSQRIKKAVASASASASKVSSVKKAT 328
Query: 1813 PVITXXXXXXXXXXXXXXKYSGSSKVPPSSGEGQKWTTLVHNGVIFPPPYKPHGVKMLYK 1634
V++ YS SSK+ PSSG+GQKWTTL HNGVIFPPPYKPHGVKMLYK
Sbjct: 329 KVVSSSMKKTKKKLKKPK-YSKSSKLQPSSGDGQKWTTLEHNGVIFPPPYKPHGVKMLYK 387
Query: 1633 GKPVDLTPEQEEVATMYAVMLETEYMNKPKFKENFMSDWRKILGRNHVIQSLEHCDFTPI 1454
GKPVDLTPEQEEVATMYAVML+TEY+ K +FKENFM+DWRKILG+NHVIQ LE C+FTPI
Sbjct: 388 GKPVDLTPEQEEVATMYAVMLDTEYLTKQQFKENFMNDWRKILGKNHVIQKLEECNFTPI 447
Query: 1453 FEWHXXXXXXXXXXXXXXXXXXXXXXXXXXXKYMWAILDGVKEKVGNFRVEPPGLFRGRG 1274
+EWH KYMWAI+DGVKEKVGNFRVEPPGLFRGRG
Sbjct: 448 YEWHQSEKEKKKQMSSEEKKALREEKLKQEEKYMWAIVDGVKEKVGNFRVEPPGLFRGRG 507
Query: 1273 EHPKMGKLKKRIRPSDITINIGKDAPIPECPISGESWKEIRHDNTVTWLAFWNDPINPKE 1094
EHPKMGKLK+RIRP+DITINIGK P+PECPI G+ WKE+RHDNTVTWLAFWNDPINP+E
Sbjct: 508 EHPKMGKLKRRIRPNDITINIGKGVPVPECPIPGQRWKEVRHDNTVTWLAFWNDPINPRE 567
Query: 1093 FKYVFLAASSTLKGQSDKEKYEKARLLKDYIQGIRTAYTRDFTSNDPTKKQIAVATYLID 914
FKYVFLAASS+LKGQSDKEKYEKAR LKDYI+GIR+AYT+DFTS DP K+QIAVATYLID
Sbjct: 568 FKYVFLAASSSLKGQSDKEKYEKARRLKDYIEGIRSAYTKDFTSKDPVKRQIAVATYLID 627
Query: 913 KLALRAGNEKDDDEADTVGCCTLKVENVEPVPPNILKFDFLGKDSIRYQNEVEVEIAVFK 734
KLALRAGNEKDDDEADTVGCCTLKVENVEPVPPNILKFDFLGKDSIRYQNEV V VFK
Sbjct: 628 KLALRAGNEKDDDEADTVGCCTLKVENVEPVPPNILKFDFLGKDSIRYQNEVAVYEPVFK 687
Query: 733 AIQQFRSRKKGGDDIFDKLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDMLSRETKGG 554
AIQQFRS KKGGDD+FDKLDTSKLNAHLKELMPGLTAKVFRTYNAS TL+ L++ T+GG
Sbjct: 688 AIQQFRSGKKGGDDLFDKLDTSKLNAHLKELMPGLTAKVFRTYNASFTLEQQLTKLTQGG 747
Query: 553 DIAQNVVVYQHANKEVAIICNHQRTVSKSHSAQMSRLNEKIDELKGVIEELRTDLARAKK 374
++A V VY ANKEVAIICNHQRTVSKSHS Q+SRLNEKIDELK ++EE + DLARAKK
Sbjct: 748 ELADKVAVYNVANKEVAIICNHQRTVSKSHSVQISRLNEKIDELKAILEEFKVDLARAKK 807
Query: 373 GKPPLKSADGKPKRNLNPDALEKKIAQTTVKIEKMERDKETKEDLKTVALGTSKINYLDP 194
GKPP+K ADGK KRNL P+AL+KKI QT VKI+ +ER ETKE+LKTVALGTSKINYLDP
Sbjct: 808 GKPPVKGADGKAKRNLTPEALQKKIDQTNVKIDNIERQIETKEELKTVALGTSKINYLDP 867
Query: 193 RITVAWCKRHEVPIEKIFNKSLLAKFAWAMDVEPGFRF 80
RITVAWCKRHEVPIEK+FNKSLLAKFAWAMDVEP F F
Sbjct: 868 RITVAWCKRHEVPIEKMFNKSLLAKFAWAMDVEPSFTF 905
>dbj|BAK32963.1| topoisomerase I [Ophiorrhiza sp. 35]
Length = 920
Score = 1056 bits (2730), Expect = 0.0
Identities = 556/875 (63%), Positives = 637/875 (72%), Gaps = 35/875 (4%)
Frame = -2
Query: 2620 QKHEQQSGRPASDVRPQNGQNNFVQKSKMVPSSKTP-LDRXXXXXXXXXXXXXXXXXXXS 2444
QKH QS SDVRP NG+++ QK ++ PS++TP +
Sbjct: 46 QKHVGQSAVHTSDVRPANGESSSAQKGRIQPSAETPPVKSPLSSPKASNSSAKASPITSP 105
Query: 2443 MVDSKPSTSMTNESNSVKRQIKGESVLNETTPG-----PNEDLEDSEDDKPLSARLLAGQ 2279
+SK S S T+ + K + E P N + E S+D+KPL AR
Sbjct: 106 GANSKLSASATSTAKQQNHH-KSSAAFIEPKPSVPPAKANSNSESSDDEKPLIARTSGCS 164
Query: 2278 PKVNSGNANKVANASNFGQKSKIPKSEDSDDEMPLSSKFRVKSNAGDPTHRSSTSGEKKP 2099
K S +ANK S ++ + +SEDS+DE PLS +F KS+ G+ T +S S EKKP
Sbjct: 165 SKGKSNHANKEGGDSCSIRRPVVEESEDSEDEKPLSRRFPSKSSLGESTSKSYDSDEKKP 224
Query: 2098 LLAECRQNGSASME---RKPSTVLKKRIGDSVKPADGSYLKKPKLSETSTLHKNKESSVI 1928
L A+ +QNGSAS + K +++ KR VK + S LKKPKLS T NK+++V
Sbjct: 225 LAAKVQQNGSASRDGPMNKSASLSNKRAPGEVKSLNQSSLKKPKLSSPITSISNKQAAVK 284
Query: 1927 SEMKEEDDEDHVPISQRMKKT-------------------------ASSDKKSTPVKKMT 1823
E K EDD+D++P+SQR KK+ AS K S PVKK +
Sbjct: 285 PEPKAEDDDDNIPLSQRGKKSQTAASKPKDEDDDNAPISQRIKKSPASVSKSSAPVKKAS 344
Query: 1822 KPTPVITXXXXXXXXXXXXXXKYSGSSKVPPSSGEGQKWTTLVHNGVIFPPPYKPHGVKM 1643
Y+ SSKVPP SGEGQKWTTLVHNGVIFPPPYKPHGVKM
Sbjct: 345 TVVSPSLKKVNKKSKKVIKKTAYTKSSKVPPGSGEGQKWTTLVHNGVIFPPPYKPHGVKM 404
Query: 1642 LYKGKPVDLTPEQEEVATMYAVMLETEYMNKPKFKENFMSDWRKILGRNHVIQSLEHCDF 1463
LYK +P+ LTPEQEEVATM+AVML+T+YMNKP+FKENF SDW+K+LG+NH IQ+LE CDF
Sbjct: 405 LYKRQPLTLTPEQEEVATMFAVMLDTDYMNKPRFKENFFSDWKKMLGKNHTIQNLEDCDF 464
Query: 1462 TPIFEWHXXXXXXXXXXXXXXXXXXXXXXXXXXXKYMWAILDGVKEKVGNFRVEPPGLFR 1283
PI+EWH KYMWAI+DGVKEKVGNFRVEPPGLFR
Sbjct: 465 GPIYEWHQQEREKKKQMTTEEKKALKDERLQQEEKYMWAIVDGVKEKVGNFRVEPPGLFR 524
Query: 1282 GRGEHPKMGKLKKRIRPSDITINIGKDAPIPECPISGESWKEIRHDNTVTWLAFWNDPIN 1103
GRGEHPK+GKLKKRI P DITINIGKDAPIPECPI GE WKE+R+DNTVTWLA+WNDP+N
Sbjct: 525 GRGEHPKVGKLKKRIHPRDITINIGKDAPIPECPIPGERWKEVRNDNTVTWLAYWNDPVN 584
Query: 1102 PKEFKYVFLAASSTLKGQSDKEKYEKARLLKDYIQGIRTAYTRDFTSN-DPTKKQIAVAT 926
KE KYVFLA SSTLKGQSDKEKYEKARLLKDYI GIR AYT+DFT+N DP KKQIAVAT
Sbjct: 585 LKECKYVFLAPSSTLKGQSDKEKYEKARLLKDYIHGIRAAYTKDFTNNKDPMKKQIAVAT 644
Query: 925 YLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPNILKFDFLGKDSIRYQNEVEVEI 746
YLIDKLALRAGNEKDDDEADTVGCCTL+VENVEPVPPNILK DF+GKDSIRYQNEV+VE
Sbjct: 645 YLIDKLALRAGNEKDDDEADTVGCCTLRVENVEPVPPNILKIDFIGKDSIRYQNEVQVEP 704
Query: 745 AVFKAIQQFRSRKKGGDDIFDKLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDMLSRE 566
AVFKAIQQFRS K+G +D+FD+LDTSKLNAHLKELMPGLTAKVFRTYNASITLDDMLS+E
Sbjct: 705 AVFKAIQQFRSGKEGSEDLFDRLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDMLSKE 764
Query: 565 TKGGDIAQNVVVYQHANKEVAIICNHQRTVSKSHSAQMSRLNEKIDELKGVIEELRTDLA 386
TKGG +A+ V VYQHANKEVAIICNHQRTVSKSHSAQMSRLNEKIDELK +EEL+TDL+
Sbjct: 765 TKGGKVAEKVGVYQHANKEVAIICNHQRTVSKSHSAQMSRLNEKIDELKTALEELKTDLS 824
Query: 385 RAKKGKPPLKSADGKPKRNLNPDALEKKIAQTTVKIEKMERDKETKEDLKTVALGTSKIN 206
RAKKGKPP K DG+PKRNLNP+ALE+KIAQT KIEKMERDK+TKEDLK VAL TSKI+
Sbjct: 825 RAKKGKPPSKGDDGEPKRNLNPEALERKIAQTNAKIEKMERDKKTKEDLKAVALSTSKIS 884
Query: 205 YLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMD 101
YLDPRITVAWCKR EVPIEK+FNKSLLAKFAWAM+
Sbjct: 885 YLDPRITVAWCKRQEVPIEKMFNKSLLAKFAWAMN 919