BLASTX nr result
ID: Perilla23_contig00006653
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Perilla23_contig00006653
(1037 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EYU34456.1| hypothetical protein MIMGU_mgv1a010534mg [Erythra... 332 4e-88
ref|XP_012840926.1| PREDICTED: 29 kDa ribonucleoprotein A, chlor... 319 3e-84
ref|XP_011077346.1| PREDICTED: 29 kDa ribonucleoprotein A, chlor... 306 1e-80
ref|XP_011094656.1| PREDICTED: 29 kDa ribonucleoprotein A, chlor... 286 1e-74
ref|XP_002281642.1| PREDICTED: 29 kDa ribonucleoprotein A, chlor... 264 8e-68
ref|NP_001289491.1| 29 kDa ribonucleoprotein A, chloroplastic [N... 263 2e-67
ref|XP_010926579.1| PREDICTED: 29 kDa ribonucleoprotein A, chlor... 261 5e-67
emb|CDP06746.1| unnamed protein product [Coffea canephora] 256 2e-65
ref|XP_009596607.1| PREDICTED: 29 kDa ribonucleoprotein A, chlor... 256 2e-65
ref|XP_010253722.1| PREDICTED: 29 kDa ribonucleoprotein A, chlor... 256 3e-65
sp|P49313.1|ROC1_NICPL RecName: Full=30 kDa ribonucleoprotein, c... 254 1e-64
ref|NP_001275094.1| single-stranded DNA binding protein precurso... 252 3e-64
ref|XP_010553318.1| PREDICTED: ribonucleoprotein At2g37220, chlo... 252 4e-64
ref|XP_002519525.1| ribonucleoprotein, chloroplast, putative [Ri... 252 4e-64
ref|XP_004246655.1| PREDICTED: 29 kDa ribonucleoprotein A, chlor... 252 4e-64
ref|XP_003535181.1| PREDICTED: 29 kDa ribonucleoprotein A, chlor... 252 4e-64
gb|KNA09687.1| hypothetical protein SOVF_151300 [Spinacia oleracea] 251 5e-64
ref|XP_002465205.1| hypothetical protein SORBIDRAFT_01g034120 [S... 251 9e-64
ref|XP_010035949.1| PREDICTED: 29 kDa ribonucleoprotein A, chlor... 250 1e-63
ref|XP_006650133.1| PREDICTED: ribonucleoprotein At2g37220, chlo... 250 1e-63
>gb|EYU34456.1| hypothetical protein MIMGU_mgv1a010534mg [Erythranthe guttata]
Length = 309
Score = 332 bits (850), Expect = 4e-88
Identities = 186/290 (64%), Positives = 207/290 (71%), Gaps = 6/290 (2%)
Frame = -3
Query: 1035 PYL-YTLHAVAMAASTHFLSLAPKTXXXXXXXXXXXXXXXXXXXXXSFKPLPKLVLALSP 859
PYL +TLH VAMAAS +FLSL P+T S KPLPKLVLALSP
Sbjct: 25 PYLLHTLHTVAMAASLNFLSLTPQTLSLHHTSSSAAASASTLFTPSSLKPLPKLVLALSP 84
Query: 858 ISSRARTTSKFVRFVALSSDLDE-----EGSPSYGGAEPEFSDDVKLFVGNLPFSVDSAG 694
++ A TTS+FVR VA+SS++DE EG E FS D+KLFVGNLPF+VDSA
Sbjct: 85 ATNFAHTTSRFVRCVAISSEVDETVEEGEGEDFSAPEEQSFSPDLKLFVGNLPFNVDSAA 144
Query: 693 LAQLLEQAGGVEQVEVIYDKATGRSRGFGFVVMSTVEDAEAAVKLFNGYLLEGRALRVNS 514
LA L EQAG VE VEVIYDK +GRSRGFGFV MS++ +AEAA + FNGY L+GRALRVNS
Sbjct: 145 LAGLFEQAGNVEMVEVIYDKLSGRSRGFGFVTMSSLAEAEAAAQQFNGYELQGRALRVNS 204
Query: 513 GPAPPKRDTXXXXXXXXXXXXXXXXSNTNRVYVGNLSWGVDNDDLESLFSKHGNVKEARV 334
GP P K DT NTNRVYVGNLSWGVDN LE+LFS+ G V+EARV
Sbjct: 205 GPPPAKSDTPFGGPRRTSSG------NTNRVYVGNLSWGVDNSALETLFSEQGQVQEARV 258
Query: 333 VYDRENGRSRGFGFVTYSSPEEVNSAIEKLDGKDLDGRSIRVSPAEERSR 184
VYDRE+GRSRGFGFVTYSSPEEVNSAIE LDG DLDGRSIRVSPAEER R
Sbjct: 259 VYDRESGRSRGFGFVTYSSPEEVNSAIEALDGADLDGRSIRVSPAEERPR 308
>ref|XP_012840926.1| PREDICTED: 29 kDa ribonucleoprotein A, chloroplastic [Erythranthe
guttatus]
Length = 274
Score = 319 bits (817), Expect = 3e-84
Identities = 178/279 (63%), Positives = 198/279 (70%), Gaps = 5/279 (1%)
Frame = -3
Query: 1005 MAASTHFLSLAPKTXXXXXXXXXXXXXXXXXXXXXSFKPLPKLVLALSPISSRARTTSKF 826
MAAS +FLSL P+T S KPLPKLVLALSP ++ A TTS+F
Sbjct: 1 MAASLNFLSLTPQTLSLHHTSSSAAASASTLFTPSSLKPLPKLVLALSPATNFAHTTSRF 60
Query: 825 VRFVALSSDLDE-----EGSPSYGGAEPEFSDDVKLFVGNLPFSVDSAGLAQLLEQAGGV 661
VR VA+SS++DE EG E FS D+KLFVGNLPF+VDSA LA L EQAG V
Sbjct: 61 VRCVAISSEVDETVEEGEGEDFSAPEEQSFSPDLKLFVGNLPFNVDSAALAGLFEQAGNV 120
Query: 660 EQVEVIYDKATGRSRGFGFVVMSTVEDAEAAVKLFNGYLLEGRALRVNSGPAPPKRDTXX 481
E VEVIYDK +GRSRGFGFV MS++ +AEAA + FNGY L+GRALRVNSGP P K DT
Sbjct: 121 EMVEVIYDKLSGRSRGFGFVTMSSLAEAEAAAQQFNGYELQGRALRVNSGPPPAKSDTPF 180
Query: 480 XXXXXXXXXXXXXXSNTNRVYVGNLSWGVDNDDLESLFSKHGNVKEARVVYDRENGRSRG 301
NTNRVYVGNLSWGVDN LE+LFS+ G V+EARVVYDRE+GRSRG
Sbjct: 181 GGPRRTSSG------NTNRVYVGNLSWGVDNSALETLFSEQGQVQEARVVYDRESGRSRG 234
Query: 300 FGFVTYSSPEEVNSAIEKLDGKDLDGRSIRVSPAEERSR 184
FGFVTYSSPEEVNSAIE LDG DLDGRSIRVSPAEER R
Sbjct: 235 FGFVTYSSPEEVNSAIEALDGADLDGRSIRVSPAEERPR 273
>ref|XP_011077346.1| PREDICTED: 29 kDa ribonucleoprotein A, chloroplastic-like [Sesamum
indicum]
Length = 277
Score = 306 bits (785), Expect = 1e-80
Identities = 172/278 (61%), Positives = 192/278 (69%), Gaps = 4/278 (1%)
Frame = -3
Query: 1005 MAASTHFLSLAPKTXXXXXXXXXXXXXXXXXXXXXSFKPLPKLVLALSPISSRARTTSKF 826
MAAS HFLSL P+T KPLPKLVL LS +++ A TS+F
Sbjct: 1 MAASLHFLSLTPQTLSLHHSSSSSASSASLFTPSS-LKPLPKLVLPLSTVNTYAHRTSRF 59
Query: 825 VRFVALSSDLDEEGSPSY----GGAEPEFSDDVKLFVGNLPFSVDSAGLAQLLEQAGGVE 658
V VA+SS+LDEE G EP FS D+KLFVGNLPFSVDSAGLA L EQAG V+
Sbjct: 60 VSNVAVSSELDEEVEDESLDFSGSEEPRFSPDLKLFVGNLPFSVDSAGLAGLFEQAGNVQ 119
Query: 657 QVEVIYDKATGRSRGFGFVVMSTVEDAEAAVKLFNGYLLEGRALRVNSGPAPPKRDTXXX 478
VEVIYDK +GRSRGFGFV MST+E+ EAA + FNGY LEGR LRVNSGP P KR+
Sbjct: 120 MVEVIYDKMSGRSRGFGFVTMSTIEEVEAAAEKFNGYELEGRVLRVNSGPPPSKREN--- 176
Query: 477 XXXXXXXXXXXXXSNTNRVYVGNLSWGVDNDDLESLFSKHGNVKEARVVYDRENGRSRGF 298
NTNRVYVGNL+WGVDN LE+LFS+ GNVKEARVVYDRE+GRSRGF
Sbjct: 177 SPFRGGPRGGTNSDNTNRVYVGNLAWGVDNLALETLFSEQGNVKEARVVYDRESGRSRGF 236
Query: 297 GFVTYSSPEEVNSAIEKLDGKDLDGRSIRVSPAEERSR 184
GFVTYS EEVN+AIE LDG DL+GR IRVSPAE R R
Sbjct: 237 GFVTYSCAEEVNNAIESLDGVDLNGRPIRVSPAEARPR 274
Score = 78.2 bits (191), Expect = 1e-11
Identities = 40/102 (39%), Positives = 60/102 (58%), Gaps = 2/102 (1%)
Frame = -3
Query: 789 EGSPSYGGAEPEFSDDV--KLFVGNLPFSVDSAGLAQLLEQAGGVEQVEVIYDKATGRSR 616
E SP GG + D +++VGNL + VD+ L L + G V++ V+YD+ +GRSR
Sbjct: 175 ENSPFRGGPRGGTNSDNTNRVYVGNLAWGVDNLALETLFSEQGNVKEARVVYDRESGRSR 234
Query: 615 GFGFVVMSTVEDAEAAVKLFNGYLLEGRALRVNSGPAPPKRD 490
GFGFV S E+ A++ +G L GR +RV+ A P+R+
Sbjct: 235 GFGFVTYSCAEEVNNAIESLDGVDLNGRPIRVSPAEARPRRE 276
>ref|XP_011094656.1| PREDICTED: 29 kDa ribonucleoprotein A, chloroplastic [Sesamum
indicum]
Length = 277
Score = 286 bits (733), Expect = 1e-74
Identities = 162/279 (58%), Positives = 190/279 (68%), Gaps = 8/279 (2%)
Frame = -3
Query: 1002 AASTHFLSLAPKTXXXXXXXXXXXXXXXXXXXXXSFKPLPKLVLALSPISSRARTTSKFV 823
AAS HFLSL P++ KPL K +++LS I+ AR+TS FV
Sbjct: 3 AASLHFLSLTPQSISLPRSSSPLFTPFA-------LKPLRKPLISLSSINHYARSTSSFV 55
Query: 822 RFVALSSDLDEEGSPSY--------GGAEPEFSDDVKLFVGNLPFSVDSAGLAQLLEQAG 667
R VA+SS+L+EE G +P FS D+KLFVGNLPF+VDSA LA L EQAG
Sbjct: 56 RCVAVSSELEEEVEDGEEGQIFDFSGADQPSFSPDLKLFVGNLPFTVDSAALAGLFEQAG 115
Query: 666 GVEQVEVIYDKATGRSRGFGFVVMSTVEDAEAAVKLFNGYLLEGRALRVNSGPAPPKRDT 487
VE VEVIYDK +GRSRGFGFV MSTVE+ EAA + FNGY L+GR LRVNSGP P K +
Sbjct: 116 NVEMVEVIYDKFSGRSRGFGFVTMSTVEETEAAAQQFNGYELQGRVLRVNSGPPPAKSEN 175
Query: 486 XXXXXXXXXXXXXXXXSNTNRVYVGNLSWGVDNDDLESLFSKHGNVKEARVVYDRENGRS 307
+TN++YVGNL+WGVDN LE+LFS+ GNVKEARVVYD+E+GRS
Sbjct: 176 --PSFRGARGRERTSYDSTNKLYVGNLAWGVDNLALETLFSEQGNVKEARVVYDKESGRS 233
Query: 306 RGFGFVTYSSPEEVNSAIEKLDGKDLDGRSIRVSPAEER 190
RGFGFVTYSS EEVNSAIE+LDG DL GR+IRVSPAE R
Sbjct: 234 RGFGFVTYSSAEEVNSAIEELDGMDLHGRAIRVSPAEAR 272
Score = 82.8 bits (203), Expect = 4e-13
Identities = 42/101 (41%), Positives = 61/101 (60%), Gaps = 4/101 (3%)
Frame = -3
Query: 783 SPSYGGAE----PEFSDDVKLFVGNLPFSVDSAGLAQLLEQAGGVEQVEVIYDKATGRSR 616
+PS+ GA + KL+VGNL + VD+ L L + G V++ V+YDK +GRSR
Sbjct: 175 NPSFRGARGRERTSYDSTNKLYVGNLAWGVDNLALETLFSEQGNVKEARVVYDKESGRSR 234
Query: 615 GFGFVVMSTVEDAEAAVKLFNGYLLEGRALRVNSGPAPPKR 493
GFGFV S+ E+ +A++ +G L GRA+RV+ A P R
Sbjct: 235 GFGFVTYSSAEEVNSAIEELDGMDLHGRAIRVSPAEARPSR 275
>ref|XP_002281642.1| PREDICTED: 29 kDa ribonucleoprotein A, chloroplastic [Vitis
vinifera]
Length = 288
Score = 264 bits (675), Expect = 8e-68
Identities = 146/241 (60%), Positives = 170/241 (70%), Gaps = 11/241 (4%)
Frame = -3
Query: 873 LALSPISSRART-TSKFVRFVALSSDLDEEGSPSYGGAEPEFSDDVKLFVGNLPFSVDSA 697
++LSP S T +S+FVR VA+SSD +++ EP FS D+KLFVGNLPF+VDSA
Sbjct: 45 ISLSPSSRGFLTLSSRFVRNVAVSSDYEQDEDVLSDEGEPSFSPDLKLFVGNLPFNVDSA 104
Query: 696 GLAQLLEQAGGVEQVEVIYDKATGRSRGFGFVVMSTVEDAEAAVKLFNGYLLEGRALRVN 517
GLA L EQAG VE VEVIYDK TGRSRGFGFV MSTVE+ EAA + FNGY LEGR LRVN
Sbjct: 105 GLAGLFEQAGNVEMVEVIYDKITGRSRGFGFVTMSTVEEVEAAAQQFNGYELEGRQLRVN 164
Query: 516 SGPAPPKRDT----------XXXXXXXXXXXXXXXXSNTNRVYVGNLSWGVDNDDLESLF 367
SGP P +R+ ++TNR+YVGNLSWGVD+ LE+LF
Sbjct: 165 SGPPPARRENSNFRGENSNFRGENTNFRGPRGGANLNSTNRIYVGNLSWGVDDLALETLF 224
Query: 366 SKHGNVKEARVVYDRENGRSRGFGFVTYSSPEEVNSAIEKLDGKDLDGRSIRVSPAEERS 187
S+ G V EARV+YDRE GRSRGFGFVTY+S EEVN AIE LDG DL+GRSIRV+ AE R
Sbjct: 225 SEQGKVTEARVIYDRETGRSRGFGFVTYNSAEEVNRAIESLDGVDLNGRSIRVTMAEARP 284
Query: 186 R 184
R
Sbjct: 285 R 285
Score = 75.1 bits (183), Expect = 9e-11
Identities = 35/82 (42%), Positives = 51/82 (62%)
Frame = -3
Query: 738 KLFVGNLPFSVDSAGLAQLLEQAGGVEQVEVIYDKATGRSRGFGFVVMSTVEDAEAAVKL 559
+++VGNL + VD L L + G V + VIYD+ TGRSRGFGFV ++ E+ A++
Sbjct: 205 RIYVGNLSWGVDDLALETLFSEQGKVTEARVIYDRETGRSRGFGFVTYNSAEEVNRAIES 264
Query: 558 FNGYLLEGRALRVNSGPAPPKR 493
+G L GR++RV A P+R
Sbjct: 265 LDGVDLNGRSIRVTMAEARPRR 286
>ref|NP_001289491.1| 29 kDa ribonucleoprotein A, chloroplastic [Nicotiana sylvestris]
gi|698460317|ref|XP_009781507.1| PREDICTED: 29 kDa
ribonucleoprotein A, chloroplastic [Nicotiana sylvestris]
gi|12230584|sp|Q08935.1|ROC1_NICSY RecName: Full=29 kDa
ribonucleoprotein A, chloroplastic; AltName: Full=CP29A;
Flags: Precursor [Nicotiana sylvestris]
gi|19754|emb|CAA43427.1| 29kD A ribonucleoprotein
[Nicotiana sylvestris]
Length = 273
Score = 263 bits (672), Expect = 2e-67
Identities = 154/274 (56%), Positives = 181/274 (66%), Gaps = 3/274 (1%)
Frame = -3
Query: 1002 AASTHFLSLAPKTXXXXXXXXXXXXXXXXXXXXXSFKPLPKLVLALSPISSRARTTSKFV 823
A+S HFLSL P+T F LP L LS SS + +S+FV
Sbjct: 5 ASSLHFLSLTPQTLPLPKPTSQTTSLS--------FFSLPPSSLNLSLSSSSSCFSSRFV 56
Query: 822 RFVALSS-DLDEEGSPSYGGAEPE--FSDDVKLFVGNLPFSVDSAGLAQLLEQAGGVEQV 652
R V LS D E+ G E E FS D+K+FVGNLPFS DSA LA+L E+AG VE V
Sbjct: 57 RKVTLSDFDQIEDVEDGDDGVEEERNFSPDLKIFVGNLPFSADSAALAELFERAGNVEMV 116
Query: 651 EVIYDKATGRSRGFGFVVMSTVEDAEAAVKLFNGYLLEGRALRVNSGPAPPKRDTXXXXX 472
EVIYDK TGRSRGFGFV MS+ E+ EAA + FNGY L+GRALRVNSGP P KR+
Sbjct: 117 EVIYDKLTGRSRGFGFVTMSSKEEVEAACQQFNGYELDGRALRVNSGPPPEKREN---SS 173
Query: 471 XXXXXXXXXXXSNTNRVYVGNLSWGVDNDDLESLFSKHGNVKEARVVYDRENGRSRGFGF 292
++NRVYVGNL+WGVD D LE+LFS+ G V +A+VVYDR++GRSRGFGF
Sbjct: 174 FRGGSRGGGSFDSSNRVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGF 233
Query: 291 VTYSSPEEVNSAIEKLDGKDLDGRSIRVSPAEER 190
VTYSS EEVN+AIE LDG DL+GR+IRVSPAE R
Sbjct: 234 VTYSSAEEVNNAIESLDGVDLNGRAIRVSPAEAR 267
Score = 74.3 bits (181), Expect = 1e-10
Identities = 40/101 (39%), Positives = 57/101 (56%), Gaps = 2/101 (1%)
Frame = -3
Query: 789 EGSPSYGGAEP--EFSDDVKLFVGNLPFSVDSAGLAQLLEQAGGVEQVEVIYDKATGRSR 616
E S GG+ F +++VGNL + VD L L + G V +V+YD+ +GRSR
Sbjct: 170 ENSSFRGGSRGGGSFDSSNRVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSR 229
Query: 615 GFGFVVMSTVEDAEAAVKLFNGYLLEGRALRVNSGPAPPKR 493
GFGFV S+ E+ A++ +G L GRA+RV+ A P R
Sbjct: 230 GFGFVTYSSAEEVNNAIESLDGVDLNGRAIRVSPAEARPPR 270
>ref|XP_010926579.1| PREDICTED: 29 kDa ribonucleoprotein A, chloroplastic [Elaeis
guineensis]
Length = 278
Score = 261 bits (668), Expect = 5e-67
Identities = 144/228 (63%), Positives = 164/228 (71%), Gaps = 1/228 (0%)
Frame = -3
Query: 864 SPISSRARTT-SKFVRFVALSSDLDEEGSPSYGGAEPEFSDDVKLFVGNLPFSVDSAGLA 688
SP+ ART S VR VALSS+++ E + GG +FS D+KLFVGNLPFSVDSA LA
Sbjct: 53 SPLRRNARTVGSGIVRNVALSSEIEPEEELASGGEVTDFSPDLKLFVGNLPFSVDSAQLA 112
Query: 687 QLLEQAGGVEQVEVIYDKATGRSRGFGFVVMSTVEDAEAAVKLFNGYLLEGRALRVNSGP 508
L + AG VE VEVIYDK TG+SRGFGFV MSTVE+ EAAV+ FNGY LEGR LRVNSGP
Sbjct: 113 GLFQSAGNVEMVEVIYDKLTGKSRGFGFVTMSTVEEVEAAVQQFNGYTLEGRMLRVNSGP 172
Query: 507 APPKRDTXXXXXXXXXXXXXXXXSNTNRVYVGNLSWGVDNDDLESLFSKHGNVKEARVVY 328
PPK + NRVYVGNL+WGVDN LE+LFS+ G V EA+VVY
Sbjct: 173 PPPKDELSSKGFRTGGSFDA-----ANRVYVGNLAWGVDNLALETLFSEQGKVMEAKVVY 227
Query: 327 DRENGRSRGFGFVTYSSPEEVNSAIEKLDGKDLDGRSIRVSPAEERSR 184
DRE GRSRGFGFVTYS+ EEVN+AI L+G DLDGRSIRV+ AE R R
Sbjct: 228 DRETGRSRGFGFVTYSNAEEVNNAIASLNGVDLDGRSIRVTLAEARPR 275
Score = 76.6 bits (187), Expect = 3e-11
Identities = 36/82 (43%), Positives = 52/82 (63%)
Frame = -3
Query: 738 KLFVGNLPFSVDSAGLAQLLEQAGGVEQVEVIYDKATGRSRGFGFVVMSTVEDAEAAVKL 559
+++VGNL + VD+ L L + G V + +V+YD+ TGRSRGFGFV S E+ A+
Sbjct: 195 RVYVGNLAWGVDNLALETLFSEQGKVMEAKVVYDRETGRSRGFGFVTYSNAEEVNNAIAS 254
Query: 558 FNGYLLEGRALRVNSGPAPPKR 493
NG L+GR++RV A P+R
Sbjct: 255 LNGVDLDGRSIRVTLAEARPRR 276
>emb|CDP06746.1| unnamed protein product [Coffea canephora]
Length = 881
Score = 256 bits (655), Expect = 2e-65
Identities = 159/294 (54%), Positives = 181/294 (61%), Gaps = 19/294 (6%)
Frame = -3
Query: 1008 AMAASTHFLSLAPKTXXXXXXXXXXXXXXXXXXXXXSFKPLPKLV--LALSPISSR--AR 841
A A+S HFLS P+T P P L L+L+ SS
Sbjct: 592 ASASSLHFLSFTPQTTLSLSKPNATHLNSLSFLSP----PPPSLTRCLSLNAFSSLHPRE 647
Query: 840 TTSKFVRFVALSSDLD-----------EEGSPSYGGAEPE----FSDDVKLFVGNLPFSV 706
+ + R A+SSDLD E+ GG+ PE FS D+KLFVGNLPFSV
Sbjct: 648 LSLPWSRKAAVSSDLDAIGVIDGEEELEDEVLGDGGSSPEEEPSFSPDLKLFVGNLPFSV 707
Query: 705 DSAGLAQLLEQAGGVEQVEVIYDKATGRSRGFGFVVMSTVEDAEAAVKLFNGYLLEGRAL 526
DSA LA L E+AG VE VEVIYDK TGRSRGFGFV MST E+ EAA FNGY LEGRAL
Sbjct: 708 DSAALAGLFERAGNVEMVEVIYDKVTGRSRGFGFVTMSTTEEVEAAEHQFNGYELEGRAL 767
Query: 525 RVNSGPAPPKRDTXXXXXXXXXXXXXXXXSNTNRVYVGNLSWGVDNDDLESLFSKHGNVK 346
RVNSGP PP R NTNRVYVGNL+WGVDN LE+LFS+ G V
Sbjct: 768 RVNSGPPPPSR---REAGSFRGARGGASIDNTNRVYVGNLAWGVDNLALETLFSEQGKVI 824
Query: 345 EARVVYDRENGRSRGFGFVTYSSPEEVNSAIEKLDGKDLDGRSIRVSPAEERSR 184
EARVVYDR++GRSRGFGFVTYSS +EV +AIE L+G DL+GR+IRVSPAE R R
Sbjct: 825 EARVVYDRDSGRSRGFGFVTYSSADEVTNAIESLNGVDLNGRTIRVSPAEARPR 878
Score = 75.9 bits (185), Expect = 5e-11
Identities = 38/94 (40%), Positives = 59/94 (62%)
Frame = -3
Query: 771 GGAEPEFSDDVKLFVGNLPFSVDSAGLAQLLEQAGGVEQVEVIYDKATGRSRGFGFVVMS 592
GGA + ++ +++VGNL + VD+ L L + G V + V+YD+ +GRSRGFGFV S
Sbjct: 789 GGASIDNTN--RVYVGNLAWGVDNLALETLFSEQGKVIEARVVYDRDSGRSRGFGFVTYS 846
Query: 591 TVEDAEAAVKLFNGYLLEGRALRVNSGPAPPKRD 490
+ ++ A++ NG L GR +RV+ A P+RD
Sbjct: 847 SADEVTNAIESLNGVDLNGRTIRVSPAEARPRRD 880
>ref|XP_009596607.1| PREDICTED: 29 kDa ribonucleoprotein A, chloroplastic [Nicotiana
tomentosiformis] gi|697175335|ref|XP_009596608.1|
PREDICTED: 29 kDa ribonucleoprotein A, chloroplastic
[Nicotiana tomentosiformis]
Length = 284
Score = 256 bits (654), Expect = 2e-65
Identities = 153/286 (53%), Positives = 184/286 (64%), Gaps = 14/286 (4%)
Frame = -3
Query: 1005 MAAST---HFLSLAPKTXXXXXXXXXXXXXXXXXXXXXSFKPLPKLVLALSPISSRARTT 835
MA+ST HFLSL P+T F LP L LS SS + +
Sbjct: 1 MASSTSSLHFLSLTPQTLPLPKPTSQTTSLS--------FFSLPPSSLNLSLTSSSSCFS 52
Query: 834 SKFVRFVALSS-DLDEEGSPSYGGAEPE--FSDDVKLFVGNLPFSVDSAGLAQLLEQAGG 664
S+FVR V LS D E+ G E E FS D+K+FVGNLPFS DSA LA+L E+AG
Sbjct: 53 SRFVRKVTLSDFDQIEDVEDGDDGVEEERNFSPDLKIFVGNLPFSADSAALAELFERAGN 112
Query: 663 VEQVEVIYDKATGRSRGFGFVVMSTVEDAEAAVKLFNGYLLEGRALRVNSGPAPPKRD-- 490
VE VEVIYDK TGRSRGFGFV MS+ E+ EAA + FNGY L+GRALRVN+GP P +R+
Sbjct: 113 VEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAACQQFNGYELDGRALRVNAGPPPERRENS 172
Query: 489 ------TXXXXXXXXXXXXXXXXSNTNRVYVGNLSWGVDNDDLESLFSKHGNVKEARVVY 328
+ ++NRVYVGNL+WGVD D LE+LFS+ G V +A+VVY
Sbjct: 173 SFRENSSFRENSSFRGGRGGGSFDSSNRVYVGNLAWGVDQDALETLFSEQGKVVDAKVVY 232
Query: 327 DRENGRSRGFGFVTYSSPEEVNSAIEKLDGKDLDGRSIRVSPAEER 190
DR++GRSRGFGFVTYS+ EEVN+AIE LDG DL+GR+IRVSPAE R
Sbjct: 233 DRDSGRSRGFGFVTYSTAEEVNNAIESLDGVDLNGRAIRVSPAEAR 278
Score = 83.2 bits (204), Expect = 3e-13
Identities = 42/86 (48%), Positives = 59/86 (68%), Gaps = 2/86 (2%)
Frame = -3
Query: 426 RVYVGNLSWGVDNDDLESLFSKHGNVKEARVVYDRENGRSRGFGFVTYSSPEEVNSAIEK 247
+++VGNL + D+ L LF + GNV+ V+YD+ GRSRGFGFVT SS EEV +A ++
Sbjct: 88 KIFVGNLPFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAACQQ 147
Query: 246 LDGKDLDGRSIRVS--PAEERSR*SS 175
+G +LDGR++RV+ P ER SS
Sbjct: 148 FNGYELDGRALRVNAGPPPERRENSS 173
Score = 76.6 bits (187), Expect = 3e-11
Identities = 41/105 (39%), Positives = 57/105 (54%)
Frame = -3
Query: 807 SSDLDEEGSPSYGGAEPEFSDDVKLFVGNLPFSVDSAGLAQLLEQAGGVEQVEVIYDKAT 628
+S E S G F +++VGNL + VD L L + G V +V+YD+ +
Sbjct: 177 NSSFRENSSFRGGRGGGSFDSSNRVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDS 236
Query: 627 GRSRGFGFVVMSTVEDAEAAVKLFNGYLLEGRALRVNSGPAPPKR 493
GRSRGFGFV ST E+ A++ +G L GRA+RV+ A P R
Sbjct: 237 GRSRGFGFVTYSTAEEVNNAIESLDGVDLNGRAIRVSPAEARPPR 281
>ref|XP_010253722.1| PREDICTED: 29 kDa ribonucleoprotein A, chloroplastic-like [Nelumbo
nucifera]
Length = 293
Score = 256 bits (653), Expect = 3e-65
Identities = 150/276 (54%), Positives = 178/276 (64%)
Frame = -3
Query: 1011 VAMAASTHFLSLAPKTXXXXXXXXXXXXXXXXXXXXXSFKPLPKLVLALSPISSRARTTS 832
+AMA+S SL+PK + + P V + SP +S
Sbjct: 23 LAMASSLVLPSLSPKAPAFSITKNPSICLFSSSLSLTNSQNKPISVSSSSPYQI---LSS 79
Query: 831 KFVRFVALSSDLDEEGSPSYGGAEPEFSDDVKLFVGNLPFSVDSAGLAQLLEQAGGVEQV 652
+FV VA+SS+ ++E G E FS D+KLFVGNLPFSVDSAGLA L EQAG VE V
Sbjct: 80 RFVPKVAVSSEFEQEEEVLSDGGEAPFSPDLKLFVGNLPFSVDSAGLAGLFEQAGNVEMV 139
Query: 651 EVIYDKATGRSRGFGFVVMSTVEDAEAAVKLFNGYLLEGRALRVNSGPAPPKRDTXXXXX 472
EVIYDK TGRSRGFGFV MSTVE+ EAAV+ FNGY LEGRA+RVNSGP P K +
Sbjct: 140 EVIYDKQTGRSRGFGFVTMSTVEEVEAAVQQFNGYELEGRAIRVNSGPPPRKEE-----F 194
Query: 471 XXXXXXXXXXXSNTNRVYVGNLSWGVDNDDLESLFSKHGNVKEARVVYDRENGRSRGFGF 292
+RVYVGNLSWGVD+ LESLFS+ G V EA+VVYDR++GRS+GFGF
Sbjct: 195 SSRGSRGGTSFEAPHRVYVGNLSWGVDDLALESLFSEQGKVMEAKVVYDRQSGRSKGFGF 254
Query: 291 VTYSSPEEVNSAIEKLDGKDLDGRSIRVSPAEERSR 184
VTYSS E+V++AI LDG DL+GR IRVS AE R R
Sbjct: 255 VTYSSAEDVDNAISSLDGADLNGRPIRVSVAEARPR 290
Score = 73.9 bits (180), Expect = 2e-10
Identities = 38/95 (40%), Positives = 56/95 (58%)
Frame = -3
Query: 777 SYGGAEPEFSDDVKLFVGNLPFSVDSAGLAQLLEQAGGVEQVEVIYDKATGRSRGFGFVV 598
S GG F +++VGNL + VD L L + G V + +V+YD+ +GRS+GFGFV
Sbjct: 199 SRGGTS--FEAPHRVYVGNLSWGVDDLALESLFSEQGKVMEAKVVYDRQSGRSKGFGFVT 256
Query: 597 MSTVEDAEAAVKLFNGYLLEGRALRVNSGPAPPKR 493
S+ ED + A+ +G L GR +RV+ A P+R
Sbjct: 257 YSSAEDVDNAISSLDGADLNGRPIRVSVAEARPRR 291
>sp|P49313.1|ROC1_NICPL RecName: Full=30 kDa ribonucleoprotein, chloroplastic; AltName:
Full=CP-RBP30; Flags: Precursor [Nicotiana
plumbaginifolia] gi|19708|emb|CAA46234.1| RNA binding
protein 30 [Nicotiana plumbaginifolia]
Length = 279
Score = 254 bits (648), Expect = 1e-64
Identities = 151/277 (54%), Positives = 178/277 (64%), Gaps = 6/277 (2%)
Frame = -3
Query: 1002 AASTHFLSLAPKTXXXXXXXXXXXXXXXXXXXXXSFKPLPKLVLALSPISSRARTTSKFV 823
A+S HFLSL P+T F LP L LS S + +S+FV
Sbjct: 5 ASSLHFLSLTPQTLLLPKPTSQTTSLS--------FFSLPPSSLNLSLSSPSSCFSSRFV 56
Query: 822 RFVALSS-DLDEEGSPSYGGAEPE--FSDDVKLFVGNLPFSVDSAGLAQLLEQAGGVEQV 652
R V L D E+ G E E FS D+K+FVGNL FS DSA LA+L E+AG VE V
Sbjct: 57 RKVTLPDFDQIEDVEDGDEGVEEERNFSPDLKIFVGNLLFSADSAALAELFERAGNVEMV 116
Query: 651 EVIYDKATGRSRGFGFVVMSTVEDAEAAVKLFNGYLLEGRALRVNSGPAPPKRDT---XX 481
EVIYDK TGRSRGFGFV MS+ E+ EAA + FNGY L+GRALRVNSGP P KR+
Sbjct: 117 EVIYDKLTGRSRGFGFVTMSSKEEVEAACQQFNGYELDGRALRVNSGPPPEKRENSSFRE 176
Query: 480 XXXXXXXXXXXXXXSNTNRVYVGNLSWGVDNDDLESLFSKHGNVKEARVVYDRENGRSRG 301
++NRVYVGNL+WGVD D LE+LFS+ G V +A+VVYDR++GRSRG
Sbjct: 177 NSSFRGGSRGGGSFDSSNRVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRG 236
Query: 300 FGFVTYSSPEEVNSAIEKLDGKDLDGRSIRVSPAEER 190
FGFVTYSS EEVN+AIE LDG DL+GR+IRVSPAE R
Sbjct: 237 FGFVTYSSAEEVNNAIESLDGVDLNGRAIRVSPAEAR 273
Score = 74.3 bits (181), Expect = 1e-10
Identities = 40/101 (39%), Positives = 57/101 (56%), Gaps = 2/101 (1%)
Frame = -3
Query: 789 EGSPSYGGAEP--EFSDDVKLFVGNLPFSVDSAGLAQLLEQAGGVEQVEVIYDKATGRSR 616
E S GG+ F +++VGNL + VD L L + G V +V+YD+ +GRSR
Sbjct: 176 ENSSFRGGSRGGGSFDSSNRVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSR 235
Query: 615 GFGFVVMSTVEDAEAAVKLFNGYLLEGRALRVNSGPAPPKR 493
GFGFV S+ E+ A++ +G L GRA+RV+ A P R
Sbjct: 236 GFGFVTYSSAEEVNNAIESLDGVDLNGRAIRVSPAEARPPR 276
>ref|NP_001275094.1| single-stranded DNA binding protein precursor [Solanum tuberosum]
gi|17432522|gb|AAL39067.1|AF389431_1 single-stranded DNA
binding protein precursor [Solanum tuberosum]
Length = 289
Score = 252 bits (644), Expect = 3e-64
Identities = 154/289 (53%), Positives = 182/289 (62%), Gaps = 18/289 (6%)
Frame = -3
Query: 1002 AASTHFLSLAPKTXXXXXXXXXXXXXXXXXXXXXSFKPLPKLVLALSPISS---RARTTS 832
++S HFLSL P+T F LP L LS SS R +S
Sbjct: 5 SSSLHFLSLTPQTLPKPTSQTTSIS----------FFSLPPSSLNLSLSSSSTPRNFESS 54
Query: 831 KFVRFVALSS-----------DLDEEGSPSYGGA---EPEFSDDVKLFVGNLPFSVDSAG 694
+FVR V LS D +EEG S GA E + D+K+FVGNLPFSVDSA
Sbjct: 55 RFVRKVTLSDFDQIEEVEAGDDDEEEGGLSDEGASYEERNANPDLKIFVGNLPFSVDSAA 114
Query: 693 LAQLLEQAGGVEQVEVIYDKATGRSRGFGFVVMSTVEDAEAAVKLFNGYLLEGRALRVNS 514
LA+L E+AG VE VEVIYDK TGRSRGFGFV MS+ E EAA + FNGY ++GRALRVNS
Sbjct: 115 LAELFERAGDVEMVEVIYDKLTGRSRGFGFVTMSSKEAVEAACQQFNGYEIDGRALRVNS 174
Query: 513 GPAPPKRD-TXXXXXXXXXXXXXXXXSNTNRVYVGNLSWGVDNDDLESLFSKHGNVKEAR 337
GPAPPKR+ + ++NRVYVGNL+W VD LE+LFS+ G V +A+
Sbjct: 175 GPAPPKRENSFGDNSSYQGGRGGGSMDSSNRVYVGNLAWSVDQQQLETLFSEQGKVVDAK 234
Query: 336 VVYDRENGRSRGFGFVTYSSPEEVNSAIEKLDGKDLDGRSIRVSPAEER 190
VVYDR++GRSRGFGFVTYSS +EVN AIE LDG DL GR+IRVSPAE R
Sbjct: 235 VVYDRDSGRSRGFGFVTYSSAKEVNDAIESLDGVDLGGRAIRVSPAEAR 283
Score = 72.0 bits (175), Expect = 7e-10
Identities = 38/93 (40%), Positives = 57/93 (61%)
Frame = -3
Query: 771 GGAEPEFSDDVKLFVGNLPFSVDSAGLAQLLEQAGGVEQVEVIYDKATGRSRGFGFVVMS 592
GG + S+ +++VGNL +SVD L L + G V +V+YD+ +GRSRGFGFV S
Sbjct: 196 GGGSMDSSN--RVYVGNLAWSVDQQQLETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYS 253
Query: 591 TVEDAEAAVKLFNGYLLEGRALRVNSGPAPPKR 493
+ ++ A++ +G L GRA+RV+ A P R
Sbjct: 254 SAKEVNDAIESLDGVDLGGRAIRVSPAEARPPR 286
>ref|XP_010553318.1| PREDICTED: ribonucleoprotein At2g37220, chloroplastic-like
[Tarenaya hassleriana] gi|729396213|ref|XP_010553320.1|
PREDICTED: ribonucleoprotein At2g37220,
chloroplastic-like [Tarenaya hassleriana]
Length = 291
Score = 252 bits (643), Expect = 4e-64
Identities = 134/222 (60%), Positives = 160/222 (72%), Gaps = 7/222 (3%)
Frame = -3
Query: 834 SKFVRFVALSSDLDEEGSPSYGG----AEPEFSDDVKLFVGNLPFSVDSAGLAQLLEQAG 667
S+F+R V++SSDL+ E +GG EP FS D+KLFVGNLPFSVDSA LA L G
Sbjct: 64 SRFLRNVSISSDLEVEEDGMFGGDAEEEEPGFSPDLKLFVGNLPFSVDSAQLADLFGSVG 123
Query: 666 GVEQVEVIYDKATGRSRGFGFVVMSTVEDAEAAVKLFNGYLLEGRALRVNSGPAPPKRDT 487
V+ VEVIYDK TGRSRGFGFV MSTV++ EAA + FNGY EGR LRVNSGP PP+R+
Sbjct: 124 NVQMVEVIYDKVTGRSRGFGFVTMSTVDEVEAAAQQFNGYEFEGRPLRVNSGPPPPRREE 183
Query: 486 XXXXXXXXXXXXXXXXSN---TNRVYVGNLSWGVDNDDLESLFSKHGNVKEARVVYDREN 316
S+ ++RVYVGNL+W VD+ LES+FS+HG V EARV+YDR++
Sbjct: 184 PFSRGPRSSFPSSGSGSSSGPSSRVYVGNLAWAVDDMALESMFSEHGKVVEARVIYDRDS 243
Query: 315 GRSRGFGFVTYSSPEEVNSAIEKLDGKDLDGRSIRVSPAEER 190
GRS+GFGFVTYSSP+EV +AI LDG DLDGR IRVS AE R
Sbjct: 244 GRSKGFGFVTYSSPQEVKNAIRSLDGVDLDGRQIRVSMAESR 285
Score = 68.6 bits (166), Expect = 8e-09
Identities = 31/82 (37%), Positives = 53/82 (64%)
Frame = -3
Query: 738 KLFVGNLPFSVDSAGLAQLLEQAGGVEQVEVIYDKATGRSRGFGFVVMSTVEDAEAAVKL 559
+++VGNL ++VD L + + G V + VIYD+ +GRS+GFGFV S+ ++ + A++
Sbjct: 207 RVYVGNLAWAVDDMALESMFSEHGKVVEARVIYDRDSGRSKGFGFVTYSSPQEVKNAIRS 266
Query: 558 FNGYLLEGRALRVNSGPAPPKR 493
+G L+GR +RV+ + P R
Sbjct: 267 LDGVDLDGRQIRVSMAESRPPR 288
>ref|XP_002519525.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
gi|223541388|gb|EEF42939.1| ribonucleoprotein,
chloroplast, putative [Ricinus communis]
Length = 280
Score = 252 bits (643), Expect = 4e-64
Identities = 132/219 (60%), Positives = 157/219 (71%)
Frame = -3
Query: 840 TTSKFVRFVALSSDLDEEGSPSYGGAEPEFSDDVKLFVGNLPFSVDSAGLAQLLEQAGGV 661
++S+FV VA+SS+ +E S G E FS D+KLFVGNLPF+VDSA LA L E AG V
Sbjct: 59 SSSRFVPSVAISSEFGQEEDVSSDGDESSFSQDLKLFVGNLPFNVDSAQLAGLFESAGNV 118
Query: 660 EQVEVIYDKATGRSRGFGFVVMSTVEDAEAAVKLFNGYLLEGRALRVNSGPAPPKRDTXX 481
E VEVIYDK TGRSRGFGFV MS++++ EAA + FNGY LEGRALRVNSGP P + +
Sbjct: 119 EMVEVIYDKVTGRSRGFGFVTMSSIDEVEAAAQQFNGYELEGRALRVNSGPPPQRESSFS 178
Query: 480 XXXXXXXXXXXXXXSNTNRVYVGNLSWGVDNDDLESLFSKHGNVKEARVVYDRENGRSRG 301
NR+YVGNLSW VDN LES FS+ G V +A+VVYDRE+GRSRG
Sbjct: 179 RSPRFGGGGGGGESLEGNRLYVGNLSWSVDNLALESFFSEQGKVVDAKVVYDRESGRSRG 238
Query: 300 FGFVTYSSPEEVNSAIEKLDGKDLDGRSIRVSPAEERSR 184
FGFVTYSS EEV +AI+ L+G +LDGR+IRVS AE R R
Sbjct: 239 FGFVTYSSAEEVENAIDSLNGAELDGRAIRVSVAEARPR 277
Score = 82.4 bits (202), Expect = 5e-13
Identities = 41/93 (44%), Positives = 58/93 (62%)
Frame = -3
Query: 771 GGAEPEFSDDVKLFVGNLPFSVDSAGLAQLLEQAGGVEQVEVIYDKATGRSRGFGFVVMS 592
GG E + +L+VGNL +SVD+ L + G V +V+YD+ +GRSRGFGFV S
Sbjct: 186 GGGGGESLEGNRLYVGNLSWSVDNLALESFFSEQGKVVDAKVVYDRESGRSRGFGFVTYS 245
Query: 591 TVEDAEAAVKLFNGYLLEGRALRVNSGPAPPKR 493
+ E+ E A+ NG L+GRA+RV+ A P+R
Sbjct: 246 SAEEVENAIDSLNGAELDGRAIRVSVAEARPRR 278
Score = 80.5 bits (197), Expect = 2e-12
Identities = 39/84 (46%), Positives = 57/84 (67%)
Frame = -3
Query: 426 RVYVGNLSWGVDNDDLESLFSKHGNVKEARVVYDRENGRSRGFGFVTYSSPEEVNSAIEK 247
+++VGNL + VD+ L LF GNV+ V+YD+ GRSRGFGFVT SS +EV +A ++
Sbjct: 93 KLFVGNLPFNVDSAQLAGLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSSIDEVEAAAQQ 152
Query: 246 LDGKDLDGRSIRVSPAEERSR*SS 175
+G +L+GR++RV+ R SS
Sbjct: 153 FNGYELEGRALRVNSGPPPQRESS 176
>ref|XP_004246655.1| PREDICTED: 29 kDa ribonucleoprotein A, chloroplastic [Solanum
lycopersicum]
Length = 290
Score = 252 bits (643), Expect = 4e-64
Identities = 154/290 (53%), Positives = 182/290 (62%), Gaps = 19/290 (6%)
Frame = -3
Query: 1002 AASTHFLSLAPKTXXXXXXXXXXXXXXXXXXXXXSFKPLPKLVLALSPISS---RARTTS 832
++S HFLSL P+T F LP L LS SS R +S
Sbjct: 5 SSSLHFLSLTPQTLPKPTSQTTSIS----------FFSLPSSSLNLSLSSSSTPRYFESS 54
Query: 831 KFVRFVALSS------------DLDEEGSPSYGGA---EPEFSDDVKLFVGNLPFSVDSA 697
+FVR V LS D +EEG S GA E + D+K+FVGNLPFSVDSA
Sbjct: 55 RFVRKVTLSDFDQIEEVGAGDDDEEEEGGLSDEGASYQERNANPDLKIFVGNLPFSVDSA 114
Query: 696 GLAQLLEQAGGVEQVEVIYDKATGRSRGFGFVVMSTVEDAEAAVKLFNGYLLEGRALRVN 517
LA+L E+AG VE VEVIYDK TGRSRGFGFV MS+ E EAA + FNGY ++GRALRVN
Sbjct: 115 YLAELFERAGDVEMVEVIYDKLTGRSRGFGFVTMSSKEAVEAACQQFNGYEIDGRALRVN 174
Query: 516 SGPAPPKRD-TXXXXXXXXXXXXXXXXSNTNRVYVGNLSWGVDNDDLESLFSKHGNVKEA 340
SGPAPPKR+ + ++NRVYVGNL+W VD LE+LFS+ G V +A
Sbjct: 175 SGPAPPKRENSFGGNSSYQGGRGGGSMDSSNRVYVGNLAWSVDQQQLETLFSEQGKVVDA 234
Query: 339 RVVYDRENGRSRGFGFVTYSSPEEVNSAIEKLDGKDLDGRSIRVSPAEER 190
+VVYDR++GRSRGFGFVTYSS +EVN AIE LDG DL GR+IRVSPAE R
Sbjct: 235 KVVYDRDSGRSRGFGFVTYSSAQEVNDAIESLDGVDLGGRAIRVSPAEAR 284
Score = 73.9 bits (180), Expect = 2e-10
Identities = 41/100 (41%), Positives = 59/100 (59%), Gaps = 2/100 (2%)
Frame = -3
Query: 786 GSPSYGGAEPEFSDDV--KLFVGNLPFSVDSAGLAQLLEQAGGVEQVEVIYDKATGRSRG 613
G+ SY G S D +++VGNL +SVD L L + G V +V+YD+ +GRSRG
Sbjct: 188 GNSSYQGGRGGGSMDSSNRVYVGNLAWSVDQQQLETLFSEQGKVVDAKVVYDRDSGRSRG 247
Query: 612 FGFVVMSTVEDAEAAVKLFNGYLLEGRALRVNSGPAPPKR 493
FGFV S+ ++ A++ +G L GRA+RV+ A P R
Sbjct: 248 FGFVTYSSAQEVNDAIESLDGVDLGGRAIRVSPAEARPPR 287
>ref|XP_003535181.1| PREDICTED: 29 kDa ribonucleoprotein A, chloroplastic [Glycine max]
gi|947083827|gb|KRH32548.1| hypothetical protein
GLYMA_10G058500 [Glycine max]
Length = 275
Score = 252 bits (643), Expect = 4e-64
Identities = 136/239 (56%), Positives = 170/239 (71%), Gaps = 2/239 (0%)
Frame = -3
Query: 894 KPLPKLVLALSPISSRARTTSKFVRFVALSSDLDEEGSPSYGGAEPEFSDDVKLFVGNLP 715
KP+ + L P + ++S+FV V +SSDL +E G P FS D+KLFVGNLP
Sbjct: 38 KPISISAVFLKPTTL---SSSRFVPHVVVSSDLGQEEDTFSDGDGPSFSPDLKLFVGNLP 94
Query: 714 FSVDSAGLAQLLEQAGGVEQVEVIYDKATGRSRGFGFVVMSTVEDAEAAVKLFNGYLLEG 535
F+VDSA LA+L E AG VE VEVIYDK TGRSRGFGFV MS+VE+AEAA + FNGY L+G
Sbjct: 95 FNVDSAQLAELFESAGNVEVVEVIYDKTTGRSRGFGFVTMSSVEEAEAAAQQFNGYELDG 154
Query: 534 RALRVNSGPAPPKRDT--XXXXXXXXXXXXXXXXSNTNRVYVGNLSWGVDNDDLESLFSK 361
RALRVNSGP P + ++ + NRV+V NL+WGVDN L+SLF +
Sbjct: 155 RALRVNSGPPPARNESAPRFRGGSSFGSRGGGPSDSENRVHVSNLAWGVDNVALKSLFRE 214
Query: 360 HGNVKEARVVYDRENGRSRGFGFVTYSSPEEVNSAIEKLDGKDLDGRSIRVSPAEERSR 184
GNV EARV+YDRE+GRSRGFGFVT+SSP+EVNSAI+ L+G DL+GR+IRVS A+ + +
Sbjct: 215 QGNVLEARVIYDRESGRSRGFGFVTFSSPDEVNSAIQSLNGVDLNGRAIRVSLADSKPK 273
Score = 75.9 bits (185), Expect = 5e-11
Identities = 40/100 (40%), Positives = 61/100 (61%), Gaps = 2/100 (2%)
Frame = -3
Query: 786 GSPSYG--GAEPEFSDDVKLFVGNLPFSVDSAGLAQLLEQAGGVEQVEVIYDKATGRSRG 613
G S+G G P S++ ++ V NL + VD+ L L + G V + VIYD+ +GRSRG
Sbjct: 176 GGSSFGSRGGGPSDSEN-RVHVSNLAWGVDNVALKSLFREQGNVLEARVIYDRESGRSRG 234
Query: 612 FGFVVMSTVEDAEAAVKLFNGYLLEGRALRVNSGPAPPKR 493
FGFV S+ ++ +A++ NG L GRA+RV+ + PK+
Sbjct: 235 FGFVTFSSPDEVNSAIQSLNGVDLNGRAIRVSLADSKPKQ 274
>gb|KNA09687.1| hypothetical protein SOVF_151300 [Spinacia oleracea]
Length = 279
Score = 251 bits (642), Expect = 5e-64
Identities = 146/276 (52%), Positives = 176/276 (63%), Gaps = 4/276 (1%)
Frame = -3
Query: 999 ASTHFL-SLAPKTXXXXXXXXXXXXXXXXXXXXXSFKPLPKLVLALSPISSRARTTSKFV 823
AST FL S APKT S K L V A + +S FV
Sbjct: 2 ASTSFLASFAPKTLIPSKISSPSLPFFSLLTSSSSSKTLLNSV-AFPSLKRFESISSSFV 60
Query: 822 RFVALSSDLDEEGS---PSYGGAEPEFSDDVKLFVGNLPFSVDSAGLAQLLEQAGGVEQV 652
R VA+SS+ ++E G +P FS D+K+FVGNLPF+VDSA LA L AG VE V
Sbjct: 61 RHVAISSEFEQEEDVMGDDDAGRQPNFSPDLKIFVGNLPFNVDSAELAGLFGAAGTVEMV 120
Query: 651 EVIYDKATGRSRGFGFVVMSTVEDAEAAVKLFNGYLLEGRALRVNSGPAPPKRDTXXXXX 472
EVIYDK TGRSRGFGFV MS+VE+ EAA + FN Y L+GR LRVN+GP PPKRD
Sbjct: 121 EVIYDKLTGRSRGFGFVTMSSVEEVEAAAQQFNNYELDGRTLRVNAGPPPPKRDDFSPRG 180
Query: 471 XXXXXXXXXXXSNTNRVYVGNLSWGVDNDDLESLFSKHGNVKEARVVYDRENGRSRGFGF 292
++NRV+VGNLSW VD+D L++LFS+ G+V EA+V+YDR+ GRSRGFGF
Sbjct: 181 AGGARGGGSSFGSSNRVHVGNLSWKVDDDALKTLFSETGDVVEAKVIYDRDTGRSRGFGF 240
Query: 291 VTYSSPEEVNSAIEKLDGKDLDGRSIRVSPAEERSR 184
VTY+S EVN+AIE LDG DL+GRSIRV+ AE R R
Sbjct: 241 VTYNSANEVNTAIESLDGVDLNGRSIRVTAAEARQR 276
Score = 73.9 bits (180), Expect = 2e-10
Identities = 37/103 (35%), Positives = 55/103 (53%)
Frame = -3
Query: 801 DLDEEGSPSYGGAEPEFSDDVKLFVGNLPFSVDSAGLAQLLEQAGGVEQVEVIYDKATGR 622
D G+ G F ++ VGNL + VD L L + G V + +VIYD+ TGR
Sbjct: 175 DFSPRGAGGARGGGSSFGSSNRVHVGNLSWKVDDDALKTLFSETGDVVEAKVIYDRDTGR 234
Query: 621 SRGFGFVVMSTVEDAEAAVKLFNGYLLEGRALRVNSGPAPPKR 493
SRGFGFV ++ + A++ +G L GR++RV + A +R
Sbjct: 235 SRGFGFVTYNSANEVNTAIESLDGVDLNGRSIRVTAAEARQRR 277
>ref|XP_002465205.1| hypothetical protein SORBIDRAFT_01g034120 [Sorghum bicolor]
gi|241919059|gb|EER92203.1| hypothetical protein
SORBIDRAFT_01g034120 [Sorghum bicolor]
Length = 262
Score = 251 bits (640), Expect = 9e-64
Identities = 130/208 (62%), Positives = 155/208 (74%)
Frame = -3
Query: 813 ALSSDLDEEGSPSYGGAEPEFSDDVKLFVGNLPFSVDSAGLAQLLEQAGGVEQVEVIYDK 634
A++ +L+ EG P G E EFS+D+++FVGNLPFSVDSA LA L EQAG VE VEVIYDK
Sbjct: 62 AVTEELEAEGQP---GGEEEFSEDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDK 118
Query: 633 ATGRSRGFGFVVMSTVEDAEAAVKLFNGYLLEGRALRVNSGPAPPKRDTXXXXXXXXXXX 454
TGRSRGFGFV MS+V++ EAAV+ FNGY+L+GR+LRVNSGP PP+ +
Sbjct: 119 LTGRSRGFGFVTMSSVQEVEAAVEQFNGYVLDGRSLRVNSGPPPPRDPS----------S 168
Query: 453 XXXXXSNTNRVYVGNLSWGVDNDDLESLFSKHGNVKEARVVYDRENGRSRGFGFVTYSSP 274
+ NRVYVGNLSWGVDN L +LFS+ G V EAR+VYDRE+GRSRGFGFVTY S
Sbjct: 169 QRGPRGDANRVYVGNLSWGVDNSALANLFSEQGEVLEARIVYDRESGRSRGFGFVTYGSA 228
Query: 273 EEVNSAIEKLDGKDLDGRSIRVSPAEER 190
EEV +AI LDG DLDGR IRV+ AE +
Sbjct: 229 EEVENAISNLDGSDLDGRQIRVTVAESK 256
Score = 73.2 bits (178), Expect = 3e-10
Identities = 34/85 (40%), Positives = 53/85 (62%)
Frame = -3
Query: 747 DDVKLFVGNLPFSVDSAGLAQLLEQAGGVEQVEVIYDKATGRSRGFGFVVMSTVEDAEAA 568
D +++VGNL + VD++ LA L + G V + ++YD+ +GRSRGFGFV + E+ E A
Sbjct: 175 DANRVYVGNLSWGVDNSALANLFSEQGEVLEARIVYDRESGRSRGFGFVTYGSAEEVENA 234
Query: 567 VKLFNGYLLEGRALRVNSGPAPPKR 493
+ +G L+GR +RV + P R
Sbjct: 235 ISNLDGSDLDGRQIRVTVAESKPPR 259
>ref|XP_010035949.1| PREDICTED: 29 kDa ribonucleoprotein A, chloroplastic [Eucalyptus
grandis] gi|629081014|gb|KCW47459.1| hypothetical
protein EUGRSUZ_K01243 [Eucalyptus grandis]
gi|629081015|gb|KCW47460.1| hypothetical protein
EUGRSUZ_K01243 [Eucalyptus grandis]
Length = 298
Score = 250 bits (639), Expect = 1e-63
Identities = 138/247 (55%), Positives = 170/247 (68%), Gaps = 11/247 (4%)
Frame = -3
Query: 891 PLPKLVLALSPISSRARTTSKFVRFVALSSDLDEEGSPSYGGAEPE-----------FSD 745
PL LA ++ A ++S+F+R V +SS++D+E GG E F+
Sbjct: 49 PLLSFDLAPPRAAAAASSSSRFLRRVFVSSEVDQEEQGEEGGFLSEEDGDDERGTRGFAP 108
Query: 744 DVKLFVGNLPFSVDSAGLAQLLEQAGGVEQVEVIYDKATGRSRGFGFVVMSTVEDAEAAV 565
D+KLFVGNLPF+VDSA LA L E AG VE VEVIYDK TGRSRGFGFV MST E+ EAA
Sbjct: 109 DLKLFVGNLPFTVDSAQLAGLFESAGNVEMVEVIYDKETGRSRGFGFVTMSTAEEVEAAA 168
Query: 564 KLFNGYLLEGRALRVNSGPAPPKRDTXXXXXXXXXXXXXXXXSNTNRVYVGNLSWGVDND 385
+ FNGY L+GR LRVNSGP P KRD +++NRVYVGNLSWGVD+
Sbjct: 169 QQFNGYELDGRPLRVNSGPPPAKRDGPPPRMGRGGSNFSNSSNSSNRVYVGNLSWGVDDL 228
Query: 384 DLESLFSKHGNVKEARVVYDRENGRSRGFGFVTYSSPEEVNSAIEKLDGKDLDGRSIRVS 205
LE+LFS+ G V EA+VVYDRE+GRSRGFGFV+Y S +EVN+AI+ L+G DL+GRSIRV+
Sbjct: 229 ALETLFSEQGRVLEAKVVYDRESGRSRGFGFVSYGSADEVNNAIDSLNGVDLNGRSIRVT 288
Query: 204 PAEERSR 184
AE + R
Sbjct: 289 HAEAKPR 295
Score = 71.2 bits (173), Expect = 1e-09
Identities = 33/82 (40%), Positives = 50/82 (60%)
Frame = -3
Query: 738 KLFVGNLPFSVDSAGLAQLLEQAGGVEQVEVIYDKATGRSRGFGFVVMSTVEDAEAAVKL 559
+++VGNL + VD L L + G V + +V+YD+ +GRSRGFGFV + ++ A+
Sbjct: 215 RVYVGNLSWGVDDLALETLFSEQGRVLEAKVVYDRESGRSRGFGFVSYGSADEVNNAIDS 274
Query: 558 FNGYLLEGRALRVNSGPAPPKR 493
NG L GR++RV A P+R
Sbjct: 275 LNGVDLNGRSIRVTHAEAKPRR 296
>ref|XP_006650133.1| PREDICTED: ribonucleoprotein At2g37220, chloroplastic-like [Oryza
brachyantha]
Length = 262
Score = 250 bits (639), Expect = 1e-63
Identities = 130/209 (62%), Positives = 152/209 (72%)
Frame = -3
Query: 816 VALSSDLDEEGSPSYGGAEPEFSDDVKLFVGNLPFSVDSAGLAQLLEQAGGVEQVEVIYD 637
VA+S D++ E AE EFS+D+++FVGNLPFSVDSA LA L EQAG VE VEVIYD
Sbjct: 58 VAVSEDVETEQEEEGSEAEEEFSEDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYD 117
Query: 636 KATGRSRGFGFVVMSTVEDAEAAVKLFNGYLLEGRALRVNSGPAPPKRDTXXXXXXXXXX 457
K TGRSRGFGFV MSTVE+ EAAV+ FNG++L+GR+LRVNSGP PP+ +
Sbjct: 118 KLTGRSRGFGFVTMSTVEEVEAAVEQFNGHILDGRSLRVNSGPPPPREQS---------- 167
Query: 456 XXXXXXSNTNRVYVGNLSWGVDNDDLESLFSKHGNVKEARVVYDRENGRSRGFGFVTYSS 277
NRVYVGNLSWGVDN L +LFS G V EAR++YDRE+GRSRGFGFVTY S
Sbjct: 168 SPRAPRGEANRVYVGNLSWGVDNAALANLFSGEGEVLEARIIYDRESGRSRGFGFVTYGS 227
Query: 276 PEEVNSAIEKLDGKDLDGRSIRVSPAEER 190
EEV +A+ LDG DLDGR IRV+ AE R
Sbjct: 228 AEEVENAVSNLDGTDLDGRQIRVTVAESR 256