BLASTX nr result
ID: Perilla23_contig00005505
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Perilla23_contig00005505
(436 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_012831931.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 184 2e-44
ref|XP_011094726.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP... 176 5e-42
ref|XP_008237900.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 118 2e-24
ref|XP_010094504.1| DEAD-box ATP-dependent RNA helicase 42 [Moru... 115 2e-23
ref|XP_007211096.1| hypothetical protein PRUPE_ppa000460mg [Prun... 114 3e-23
emb|CDP10729.1| unnamed protein product [Coffea canephora] 111 2e-22
ref|XP_002280049.2| PREDICTED: DEAD-box ATP-dependent RNA helica... 111 2e-22
ref|XP_010247491.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP... 108 2e-21
ref|XP_012073558.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 106 6e-21
ref|XP_011034784.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 106 8e-21
ref|XP_003517532.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 105 1e-20
gb|KHN25605.1| DEAD-box ATP-dependent RNA helicase 45 [Glycine s... 105 2e-20
ref|XP_004252970.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 105 2e-20
ref|XP_010025082.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 104 2e-20
gb|KCW61668.1| hypothetical protein EUGRSUZ_H04402 [Eucalyptus g... 104 2e-20
ref|XP_002307002.2| hypothetical protein POPTR_0005s27880g [Popu... 104 2e-20
ref|XP_010529114.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 103 4e-20
ref|XP_010555161.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 103 4e-20
ref|XP_006349887.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 102 8e-20
ref|NP_173516.1| DEAD Box RNA Helicase RCF1 [Arabidopsis thalian... 100 4e-19
>ref|XP_012831931.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 42 [Erythranthe
guttatus] gi|848862288|ref|XP_012831932.1| PREDICTED:
DEAD-box ATP-dependent RNA helicase 42 [Erythranthe
guttatus] gi|604342616|gb|EYU41640.1| hypothetical
protein MIMGU_mgv1a000437mg [Erythranthe guttata]
Length = 1155
Score = 184 bits (468), Expect = 2e-44
Identities = 95/144 (65%), Positives = 109/144 (75%)
Frame = +2
Query: 5 EKLGVPVANELESGKTWTLEGESDDEEAGPQGRVTMDVDEDGTVQPVAEDLNGMSIDSEN 184
EKLGVPV +E +SGKTWTL+GESDDEE+ PQG+ TMD+DEDG V P +ED+NGMSID+EN
Sbjct: 292 EKLGVPVTHESKSGKTWTLDGESDDEESDPQGKSTMDLDEDGAVNPNSEDVNGMSIDAEN 351
Query: 185 EAVPTLQNGGDQSDHTVGDEEIDPLDAFMNSMVLPVVEKLNSVVRPPASNDSGPELVERN 364
E +P L+NGG DH V DEEIDPLDAFMNSMVLP VEKL++ PP NDSG ELVERN
Sbjct: 352 EVLPALENGG---DHAVVDEEIDPLDAFMNSMVLPEVEKLSN-GGPPVQNDSGSELVERN 407
Query: 365 GXXXXXXXXXXXXXSMGRIIPGDN 436
G MGRIIPG+N
Sbjct: 408 GKPNSGQSKKGTRKLMGRIIPGEN 431
>ref|XP_011094726.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase
42 [Sesamum indicum]
Length = 1155
Score = 176 bits (447), Expect = 5e-42
Identities = 95/145 (65%), Positives = 107/145 (73%)
Frame = +2
Query: 2 KEKLGVPVANELESGKTWTLEGESDDEEAGPQGRVTMDVDEDGTVQPVAEDLNGMSIDSE 181
KE LGVP +E +SGK WTLEGESDDEEAGP+G+V MDVDEDG + +D NGMS+D +
Sbjct: 283 KETLGVPGTHEPKSGKAWTLEGESDDEEAGPEGKVAMDVDEDGAGKLSGDDENGMSVDVD 342
Query: 182 NEAVPTLQNGGDQSDHTVGDEEIDPLDAFMNSMVLPVVEKLNSVVRPPASNDSGPELVER 361
NEA TLQ+G D + GD+EIDPLDAFMNSMVLP VEKLNSVV PP NDSGPELVER
Sbjct: 343 NEA--TLQSGADDA---AGDDEIDPLDAFMNSMVLPEVEKLNSVV-PPVPNDSGPELVER 396
Query: 362 NGXXXXXXXXXXXXXSMGRIIPGDN 436
NG SMGRIIPG+N
Sbjct: 397 NGKPNLEHPKKGMNKSMGRIIPGEN 421
>ref|XP_008237900.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 42 [Prunus mume]
gi|645264909|ref|XP_008237901.1| PREDICTED: DEAD-box
ATP-dependent RNA helicase 42 [Prunus mume]
Length = 1146
Score = 118 bits (295), Expect = 2e-24
Identities = 70/148 (47%), Positives = 88/148 (59%), Gaps = 3/148 (2%)
Frame = +2
Query: 2 KEKLGVPVANELESGKTWTLEGESDDEEAGPQGRVTMDVDEDGTVQPVAEDLNG--MSID 175
+EK G +E +SGK WTLEGESDDEE G+ D+D DG + G M +D
Sbjct: 270 REKRGEGDVDEPKSGKAWTLEGESDDEEVPSLGKSERDMDVDGEDNLTDREAGGDAMVVD 329
Query: 176 SENEA-VPTLQNGGDQSDHTVGDEEIDPLDAFMNSMVLPVVEKLNSVVRPPASNDSGPEL 352
SENE PTLQNG D + VGDEE+DPLDAFMNSMVLP VEKLN+ V P ++ +
Sbjct: 330 SENETDAPTLQNGADDA---VGDEEVDPLDAFMNSMVLPEVEKLNNAVEPSIVDEKNKD- 385
Query: 353 VERNGXXXXXXXXXXXXXSMGRIIPGDN 436
+++ SMGRIIPG++
Sbjct: 386 -KKDDRSNGEQPRRGSNKSMGRIIPGED 412
>ref|XP_010094504.1| DEAD-box ATP-dependent RNA helicase 42 [Morus notabilis]
gi|587866820|gb|EXB56258.1| DEAD-box ATP-dependent RNA
helicase 42 [Morus notabilis]
Length = 1140
Score = 115 bits (287), Expect = 2e-23
Identities = 71/147 (48%), Positives = 88/147 (59%), Gaps = 3/147 (2%)
Frame = +2
Query: 5 EKLGVPVANELESGKTWTLEGESDDEEAGPQGRVTMDVDEDGTVQPVAEDLNGMSIDSEN 184
EK G A E +SGKTWTLEGESDDEE G+V ++ DG P + M+IDSEN
Sbjct: 262 EKQGEANAEEPKSGKTWTLEGESDDEEVPSTGKVETAMEIDGEANPNKGVTDEMAIDSEN 321
Query: 185 EAVPT-LQNGGDQSDHTVGDEEIDPLDAFMNSMVLPVVEKLNSVVRPPASNDSGPEL--V 355
+ P+ LQNG D T GDEEIDPLDAFMNSMVLP VEKLN+ P + + +L
Sbjct: 322 GSAPSALQNG---VDGTSGDEEIDPLDAFMNSMVLPEVEKLNNASEPASIDGKSLDLNKD 378
Query: 356 ERNGXXXXXXXXXXXXXSMGRIIPGDN 436
+++ SMGRIIPG++
Sbjct: 379 KKDDQSKDEPWRKGPNKSMGRIIPGED 405
>ref|XP_007211096.1| hypothetical protein PRUPE_ppa000460mg [Prunus persica]
gi|462406831|gb|EMJ12295.1| hypothetical protein
PRUPE_ppa000460mg [Prunus persica]
Length = 1159
Score = 114 bits (285), Expect = 3e-23
Identities = 69/148 (46%), Positives = 87/148 (58%), Gaps = 3/148 (2%)
Frame = +2
Query: 2 KEKLGVPVANELESGKTWTLEGESDDEEAGPQGRVTMDVDEDGTVQPVAEDLNG--MSID 175
+EK G +E +SGK WTLEGESDDEE G+ D+D DG + G M +D
Sbjct: 283 REKRGEGDVDEPKSGKAWTLEGESDDEEVPSLGKSERDMDVDGEDNLTDREAGGDAMVVD 342
Query: 176 SENEA-VPTLQNGGDQSDHTVGDEEIDPLDAFMNSMVLPVVEKLNSVVRPPASNDSGPEL 352
SENE TLQNG D + VGDEE+DPLDAFMNSMVLP VEKLN+ V P ++ +
Sbjct: 343 SENETDALTLQNGADDA---VGDEEVDPLDAFMNSMVLPEVEKLNNAVEPSIVDEKNKD- 398
Query: 353 VERNGXXXXXXXXXXXXXSMGRIIPGDN 436
+++ SMGRIIPG++
Sbjct: 399 -KKDDLSNGEQPRRGSNKSMGRIIPGED 425
>emb|CDP10729.1| unnamed protein product [Coffea canephora]
Length = 1158
Score = 111 bits (278), Expect = 2e-22
Identities = 69/146 (47%), Positives = 86/146 (58%), Gaps = 1/146 (0%)
Frame = +2
Query: 2 KEKLGVPV-ANELESGKTWTLEGESDDEEAGPQGRVTMDVDEDGTVQPVAEDLNGMSIDS 178
+E LGV E +SGK WTLEGESDDEEA + + D+ DG + + D M++DS
Sbjct: 295 REVLGVAANVEEPKSGKAWTLEGESDDEEAPSERKEDADMSVDGGGKTMDGDGGSMAVDS 354
Query: 179 ENEAVPTLQNGGDQSDHTVGDEEIDPLDAFMNSMVLPVVEKLNSVVRPPASNDSGPELVE 358
ENE V + G ++ DEEIDPLDAFMNSMVLP VE+L+S PPAS D L E
Sbjct: 355 ENEHVISAAENG--VGGSMDDEEIDPLDAFMNSMVLPEVERLHS--EPPASEDMDTGLKE 410
Query: 359 RNGXXXXXXXXXXXXXSMGRIIPGDN 436
+NG SMGRII G++
Sbjct: 411 KNGRGNGEQPNKGVNKSMGRIISGED 436
>ref|XP_002280049.2| PREDICTED: DEAD-box ATP-dependent RNA helicase 42 [Vitis vinifera]
gi|731382541|ref|XP_010645588.1| PREDICTED: DEAD-box
ATP-dependent RNA helicase 42 [Vitis vinifera]
Length = 1147
Score = 111 bits (278), Expect = 2e-22
Identities = 63/114 (55%), Positives = 79/114 (69%), Gaps = 3/114 (2%)
Frame = +2
Query: 2 KEKLGVPV-ANELESGKTWTLEGESDDEEAGPQGRVTMDVDEDGTVQPVAEDL-NGMSID 175
+EKLG A+E +SGKTWTLEGESDDE+ P G D++ D +P ++ +GM+ID
Sbjct: 294 REKLGEAANADEPKSGKTWTLEGESDDEDVAPTGNSETDLNMDEDAKPTDNEVGDGMAID 353
Query: 176 SEN-EAVPTLQNGGDQSDHTVGDEEIDPLDAFMNSMVLPVVEKLNSVVRPPASN 334
S+N + TLQNG + +D GDEEIDPLDAFMNSMVLP VEKLN+ P SN
Sbjct: 354 SQNGTSASTLQNGDEGAD---GDEEIDPLDAFMNSMVLPEVEKLNNAAVSPTSN 404
>ref|XP_010247491.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase
42-like [Nelumbo nucifera]
Length = 1085
Score = 108 bits (269), Expect = 2e-21
Identities = 67/148 (45%), Positives = 84/148 (56%), Gaps = 3/148 (2%)
Frame = +2
Query: 2 KEKLGVPVANELESGKTWTLEGESDDEEAGPQGRVTMDVDEDGTVQPVAEDLNGMSIDSE 181
+EK G +E + GK WTLEG SDD+EA G+ DVD +P + + M +DSE
Sbjct: 206 REKCGEVNGDEPKLGKNWTLEGGSDDDEAVVAGKSEKDVDLQEDAKPASIGADAMVVDSE 265
Query: 182 N-EAVPTLQNGGDQSDHTVGDEEIDPLDAFMNSMVLPVVEKLNSVVRPPASND--SGPEL 352
N VP QNGGD G+EEIDPLDAFMNSMVLP VEKLNS V D S +
Sbjct: 266 NGSGVPMGQNGGDSVS---GEEEIDPLDAFMNSMVLPEVEKLNSFVDTSKVEDKKSDSKN 322
Query: 353 VERNGXXXXXXXXXXXXXSMGRIIPGDN 436
+++G S+GRIIPG++
Sbjct: 323 AQKDGMSNGVQPKKGINKSIGRIIPGED 350
>ref|XP_012073558.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 42 [Jatropha curcas]
gi|802604312|ref|XP_012073559.1| PREDICTED: DEAD-box
ATP-dependent RNA helicase 42 [Jatropha curcas]
gi|643728798|gb|KDP36735.1| hypothetical protein
JCGZ_08026 [Jatropha curcas]
Length = 1177
Score = 106 bits (265), Expect = 6e-21
Identities = 66/137 (48%), Positives = 83/137 (60%), Gaps = 4/137 (2%)
Frame = +2
Query: 38 ESGKTWTLEGESDDEEAGPQGR--VTMDVDEDGTVQPVAEDLNGMSIDSENEAVPTLQNG 211
++GKTWTLEGESDDEEA P G+ MD+D D +P E + M +DSEN A + +NG
Sbjct: 317 KAGKTWTLEGESDDEEAPPTGKSGTDMDMDLDENTKPDKEIGDSMVVDSENVAAAS-ENG 375
Query: 212 GDQSDHTVGDEEIDPLDAFMNSMVLPVVEKLNSVVRPPASNDSGPELV--ERNGXXXXXX 385
GD +GDEEIDPLDAFMNSMVLP VEKLN+ + + S E E+
Sbjct: 376 GDS---VMGDEEIDPLDAFMNSMVLPEVEKLNNATITQSFDGSKLESKKNEKKERINGDQ 432
Query: 386 XXXXXXXSMGRIIPGDN 436
S+GRIIPG++
Sbjct: 433 LKKSSTKSLGRIIPGED 449
>ref|XP_011034784.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 42-like [Populus
euphratica] gi|743874884|ref|XP_011034785.1| PREDICTED:
DEAD-box ATP-dependent RNA helicase 42-like [Populus
euphratica] gi|743874888|ref|XP_011034786.1| PREDICTED:
DEAD-box ATP-dependent RNA helicase 42-like [Populus
euphratica] gi|743874892|ref|XP_011034787.1| PREDICTED:
DEAD-box ATP-dependent RNA helicase 42-like [Populus
euphratica] gi|743874904|ref|XP_011034788.1| PREDICTED:
DEAD-box ATP-dependent RNA helicase 42-like [Populus
euphratica] gi|743874908|ref|XP_011034789.1| PREDICTED:
DEAD-box ATP-dependent RNA helicase 42-like [Populus
euphratica]
Length = 1213
Score = 106 bits (264), Expect = 8e-21
Identities = 62/139 (44%), Positives = 85/139 (61%), Gaps = 3/139 (2%)
Frame = +2
Query: 29 NELESGKTWTLEGESDDEEAGPQGRVTMDVDEDGTVQPVAEDLNGMSIDSENEAVPTLQN 208
NE ++GKTWTLEGESDDEEA P G+ ++D + +P E + M +D+ENE + QN
Sbjct: 351 NEPKTGKTWTLEGESDDEEAPPTGKSETEMDLEENAKPDEEVEDAMVVDTENE-ISAPQN 409
Query: 209 GGDQSDHTVGDEEIDPLDAFMNSMVLPVVEKLNSVVRPPASNDSGPELV---ERNGXXXX 379
+ D GDEEIDPLDAFMNSMVLP VEKLNS + ++D+ +L ++
Sbjct: 410 ---EDDVVNGDEEIDPLDAFMNSMVLPEVEKLNSTLVTHTADDNKTDLKNKDKKEERING 466
Query: 380 XXXXXXXXXSMGRIIPGDN 436
S+GRI+PG++
Sbjct: 467 EQRKKGSHKSLGRIVPGED 485
>ref|XP_003517532.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 42-like isoform X1
[Glycine max] gi|947129855|gb|KRH77709.1| hypothetical
protein GLYMA_01G229400 [Glycine max]
gi|947129856|gb|KRH77710.1| hypothetical protein
GLYMA_01G229400 [Glycine max]
gi|947129857|gb|KRH77711.1| hypothetical protein
GLYMA_01G229400 [Glycine max]
Length = 1104
Score = 105 bits (262), Expect = 1e-20
Identities = 74/152 (48%), Positives = 89/152 (58%), Gaps = 8/152 (5%)
Frame = +2
Query: 2 KEKLGVPVANELESGKTWTLEGESDDEEAGPQGRVT-MDVDEDGTVQPVAEDLNG-MSID 175
+EK G ANE ESGKTWTLEGESDDEE G+ T MDVDED +P E+ M +D
Sbjct: 253 REKQGEASANEPESGKTWTLEGESDDEEGLGTGKQTGMDVDEDD--KPADEEPKDVMVVD 310
Query: 176 SENEAVPTLQNGGDQSDHTVG---DEEIDPLDAFMNSMVLPVVEKLNSVVRPPASN---D 337
++N + + D D T G DEEIDPLDAFMNSMVLP VEKLN+ V S+ D
Sbjct: 311 TDNGTIAS-----DLQDGTAGAPEDEEIDPLDAFMNSMVLPEVEKLNNAVTSSLSDKAID 365
Query: 338 SGPELVERNGXXXXXXXXXXXXXSMGRIIPGD 433
P+ + NG S+GRIIPG+
Sbjct: 366 VKPK-DKGNGQNRGAQSRKGSNKSIGRIIPGE 396
>gb|KHN25605.1| DEAD-box ATP-dependent RNA helicase 45 [Glycine soja]
Length = 1104
Score = 105 bits (261), Expect = 2e-20
Identities = 74/152 (48%), Positives = 89/152 (58%), Gaps = 8/152 (5%)
Frame = +2
Query: 2 KEKLGVPVANELESGKTWTLEGESDDEEAGPQGRVT-MDVDEDGTVQPVAEDLNG-MSID 175
+EK G ANE ESGKTWTLEGESDDEE G+ T MDVDED +P E+ M +D
Sbjct: 253 REKHGEASANEPESGKTWTLEGESDDEEGLGTGKQTGMDVDEDD--KPADEEPKDVMVVD 310
Query: 176 SENEAVPTLQNGGDQSDHTVG---DEEIDPLDAFMNSMVLPVVEKLNSVVRPPASN---D 337
++N + + D D T G DEEIDPLDAFMNSMVLP VEKLN+ V S+ D
Sbjct: 311 TDNGTIAS-----DLQDGTAGAPEDEEIDPLDAFMNSMVLPEVEKLNNAVTSSLSDKAID 365
Query: 338 SGPELVERNGXXXXXXXXXXXXXSMGRIIPGD 433
P+ + NG S+GRIIPG+
Sbjct: 366 VKPK-DKGNGQNRGAQSRKVSNKSIGRIIPGE 396
>ref|XP_004252970.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 42 [Solanum
lycopersicum] gi|723753105|ref|XP_010314738.1|
PREDICTED: DEAD-box ATP-dependent RNA helicase 42
[Solanum lycopersicum] gi|723753108|ref|XP_010314739.1|
PREDICTED: DEAD-box ATP-dependent RNA helicase 42
[Solanum lycopersicum]
Length = 1147
Score = 105 bits (261), Expect = 2e-20
Identities = 73/153 (47%), Positives = 92/153 (60%), Gaps = 8/153 (5%)
Frame = +2
Query: 2 KEKLGVPV-ANELESGKTWTLEGESDDEEAGPQGRVTMDVDEDGTVQPVAEDLNG----- 163
+E LGV A E + GKTWTL+GESDDE+A +G+ MD+D D T + V +D NG
Sbjct: 272 RETLGVDAGAEEPKLGKTWTLDGESDDEDA--EGKTGMDIDRDDTGK-VMDDENGAGKVV 328
Query: 164 -MSIDSENEAVPTLQNGGDQSDHTVGDEEIDPLDAFMNSMVLPVVEKLN-SVVRPPASND 337
SI S++ P +QNGG D V D+EIDPLDAFMN MVLP VEKLN SVV +
Sbjct: 329 SSSIGSDS---PVIQNGG---DGLVDDDEIDPLDAFMNDMVLPEVEKLNKSVVNSLDGEN 382
Query: 338 SGPELVERNGXXXXXXXXXXXXXSMGRIIPGDN 436
S + E+NG +MGRIIPG++
Sbjct: 383 S--SMKEKNGPRKEEKPKMSMKKTMGRIIPGED 413
>ref|XP_010025082.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 42 [Eucalyptus
grandis] gi|702448397|ref|XP_010025083.1| PREDICTED:
DEAD-box ATP-dependent RNA helicase 42 [Eucalyptus
grandis]
Length = 1160
Score = 104 bits (260), Expect = 2e-20
Identities = 68/151 (45%), Positives = 86/151 (56%), Gaps = 6/151 (3%)
Frame = +2
Query: 2 KEKLGVPVANELESGKTWTLEGESDDEEAGPQGRVTMDVDEDGTVQPVAEDLNG--MSID 175
+EK G E +SGK WTLEGESDDEEA P + MDVDED VA++ G M +D
Sbjct: 290 REKHGEVNVEEGKSGKAWTLEGESDDEEAAPTVKPDMDVDED----EVADNKTGDAMVVD 345
Query: 176 SEN-EAVPTLQNGGDQSDHTVGDEEIDPLDAFMNSMVLPVVEKLNSVVRPPASNDSGPEL 352
SEN E P L+ + + + GDEEIDPLDAFMN +VLP VEKLN+ V + D E+
Sbjct: 346 SENGETAPALE---EMENGSGGDEEIDPLDAFMNDLVLPEVEKLNNAVPTATAPDDNSEM 402
Query: 353 VERN---GXXXXXXXXXXXXXSMGRIIPGDN 436
++ SMGRII G++
Sbjct: 403 KRKDKKINMSNGKQARNGPSKSMGRIIQGED 433
>gb|KCW61668.1| hypothetical protein EUGRSUZ_H04402 [Eucalyptus grandis]
gi|629095674|gb|KCW61669.1| hypothetical protein
EUGRSUZ_H04402 [Eucalyptus grandis]
Length = 1048
Score = 104 bits (260), Expect = 2e-20
Identities = 68/151 (45%), Positives = 86/151 (56%), Gaps = 6/151 (3%)
Frame = +2
Query: 2 KEKLGVPVANELESGKTWTLEGESDDEEAGPQGRVTMDVDEDGTVQPVAEDLNG--MSID 175
+EK G E +SGK WTLEGESDDEEA P + MDVDED VA++ G M +D
Sbjct: 178 REKHGEVNVEEGKSGKAWTLEGESDDEEAAPTVKPDMDVDED----EVADNKTGDAMVVD 233
Query: 176 SEN-EAVPTLQNGGDQSDHTVGDEEIDPLDAFMNSMVLPVVEKLNSVVRPPASNDSGPEL 352
SEN E P L+ + + + GDEEIDPLDAFMN +VLP VEKLN+ V + D E+
Sbjct: 234 SENGETAPALE---EMENGSGGDEEIDPLDAFMNDLVLPEVEKLNNAVPTATAPDDNSEM 290
Query: 353 VERN---GXXXXXXXXXXXXXSMGRIIPGDN 436
++ SMGRII G++
Sbjct: 291 KRKDKKINMSNGKQARNGPSKSMGRIIQGED 321
>ref|XP_002307002.2| hypothetical protein POPTR_0005s27880g [Populus trichocarpa]
gi|550339899|gb|EEE93998.2| hypothetical protein
POPTR_0005s27880g [Populus trichocarpa]
Length = 1073
Score = 104 bits (260), Expect = 2e-20
Identities = 60/139 (43%), Positives = 83/139 (59%), Gaps = 3/139 (2%)
Frame = +2
Query: 29 NELESGKTWTLEGESDDEEAGPQGRVTMDVDEDGTVQPVAEDLNGMSIDSENEAVPTLQN 208
+E +SGKTWTLEGESDDEEA P G+ MD+D++ P E + M +D+EN+ +
Sbjct: 211 DESKSGKTWTLEGESDDEEAPPTGKSDMDIDQEENAIPDKEAGDAMVVDTEND----ISA 266
Query: 209 GGDQSDHTVGDEEIDPLDAFMNSMVLPVVEKLNSVVRPPASNDSGPELVER---NGXXXX 379
+ D GDEEIDPLDAFMNSMVLP VE LN+ V ++D+ + ++ +
Sbjct: 267 PQSEVDAVNGDEEIDPLDAFMNSMVLPEVEMLNNAVVTQTADDNKADSKKKDKNDEGING 326
Query: 380 XXXXXXXXXSMGRIIPGDN 436
S+GRIIPG++
Sbjct: 327 GQRKKGSHKSLGRIIPGED 345
>ref|XP_010529114.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 42-like [Tarenaya
hassleriana] gi|729308041|ref|XP_010529115.1| PREDICTED:
DEAD-box ATP-dependent RNA helicase 42-like [Tarenaya
hassleriana] gi|729308044|ref|XP_010529116.1| PREDICTED:
DEAD-box ATP-dependent RNA helicase 42-like [Tarenaya
hassleriana]
Length = 889
Score = 103 bits (258), Expect = 4e-20
Identities = 62/145 (42%), Positives = 83/145 (57%)
Frame = +2
Query: 2 KEKLGVPVANELESGKTWTLEGESDDEEAGPQGRVTMDVDEDGTVQPVAEDLNGMSIDSE 181
+EK G N ++GK WTLEGESDDEEA + + ++D DG +P + + M +DSE
Sbjct: 23 REKQGDGNDNAPQAGKAWTLEGESDDEEAPTEEKPETEMDIDGDTKP-GDVGDAMLVDSE 81
Query: 182 NEAVPTLQNGGDQSDHTVGDEEIDPLDAFMNSMVLPVVEKLNSVVRPPASNDSGPELVER 361
N Q GGD SD +EEIDPLDAFMNSMVLP V+KL++ P D + +R
Sbjct: 82 NGTAAASQGGGDGSD---AEEEIDPLDAFMNSMVLPEVKKLSNTAPLPIIEDGNAD-TKR 137
Query: 362 NGXXXXXXXXXXXXXSMGRIIPGDN 436
NG ++GRII G++
Sbjct: 138 NGNPNGEQSKKGSNKALGRIIQGED 162
>ref|XP_010555161.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 42-like [Tarenaya
hassleriana]
Length = 763
Score = 103 bits (258), Expect = 4e-20
Identities = 62/145 (42%), Positives = 83/145 (57%)
Frame = +2
Query: 2 KEKLGVPVANELESGKTWTLEGESDDEEAGPQGRVTMDVDEDGTVQPVAEDLNGMSIDSE 181
+EK G N ++GK WTLEGESDDEEA + + ++D DG +P + + M +DSE
Sbjct: 23 REKQGDGNDNAPQAGKAWTLEGESDDEEAPTEEKPETEMDIDGDTKP-GDVGDAMLVDSE 81
Query: 182 NEAVPTLQNGGDQSDHTVGDEEIDPLDAFMNSMVLPVVEKLNSVVRPPASNDSGPELVER 361
N Q GGD SD +EEIDPLDAFMNSMVLP V+KL++ P D + +R
Sbjct: 82 NGTAAASQGGGDGSD---AEEEIDPLDAFMNSMVLPEVKKLSNTAPLPIIEDGNAD-TKR 137
Query: 362 NGXXXXXXXXXXXXXSMGRIIPGDN 436
NG ++GRII G++
Sbjct: 138 NGNPNGEQSKKGSNKALGRIIQGED 162
>ref|XP_006349887.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 42-like [Solanum
tuberosum]
Length = 1115
Score = 102 bits (255), Expect = 8e-20
Identities = 67/149 (44%), Positives = 89/149 (59%), Gaps = 4/149 (2%)
Frame = +2
Query: 2 KEKLGVPV-ANELESGKTWTLEGESDDEEAGPQGRVTMDVDEDGTVQPVAEDLNGMSIDS 178
+E LGV A E + GKTWTL+GESDDE+A +G+ MD+D D + + + +++ + S
Sbjct: 240 RETLGVDAGAEEPKLGKTWTLDGESDDEDA--EGKTGMDIDMDDSGKVMDDEIGADKVVS 297
Query: 179 EN--EAVPTLQNGGDQSDHTVGDEEIDPLDAFMNSMVLPVVEKLN-SVVRPPASNDSGPE 349
+ P +QNGGD V D+EIDPLDAFMN MVLP VEKLN SVV +S
Sbjct: 298 SSIGSDSPVIQNGGDG---LVDDDEIDPLDAFMNDMVLPEVEKLNKSVVNSLDGENS--S 352
Query: 350 LVERNGXXXXXXXXXXXXXSMGRIIPGDN 436
L E+NG +MGRIIPG++
Sbjct: 353 LKEKNGLRKEEKPKMSMKKTMGRIIPGED 381
>ref|NP_173516.1| DEAD Box RNA Helicase RCF1 [Arabidopsis thaliana]
gi|108861895|sp|Q8H0U8.2|RH42_ARATH RecName:
Full=DEAD-box ATP-dependent RNA helicase 42; AltName:
Full=DEAD-box RNA helicase RCF1; AltName: Full=REGULATOR
OF CBF GENE EXPRESSION 1
gi|4836896|gb|AAD30599.1|AC007369_9 Similar to RNA
helicases [Arabidopsis thaliana]
gi|332191919|gb|AEE30040.1| DEAD Box RNA Helicase RCF1
[Arabidopsis thaliana]
Length = 1166
Score = 100 bits (249), Expect = 4e-19
Identities = 61/144 (42%), Positives = 79/144 (54%)
Frame = +2
Query: 5 EKLGVPVANELESGKTWTLEGESDDEEAGPQGRVTMDVDEDGTVQPVAEDLNGMSIDSEN 184
E G NE ++GK WTLEGESDDEE P+ + ++D D +P D + +D EN
Sbjct: 302 ESKGDADGNEPKAGKAWTLEGESDDEEGHPEEKSETEMDVDEETKP-ENDGDAKMVDLEN 360
Query: 185 EAVPTLQNGGDQSDHTVGDEEIDPLDAFMNSMVLPVVEKLNSVVRPPASNDSGPELVERN 364
E T+ G D V +EEIDPLDAFMN+MVLP VEK + PPA ND G + N
Sbjct: 361 ETAATVSESG--GDGAVDEEEIDPLDAFMNTMVLPEVEKFCNGAPPPAVND-GTLDSKMN 417
Query: 365 GXXXXXXXXXXXXXSMGRIIPGDN 436
G ++GRII G++
Sbjct: 418 GKESGDRPKKGFNKALGRIIQGED 441