BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Perilla23_contig00004738
         (850 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011075762.1| PREDICTED: RNA polymerase sigma factor sigA ...    60   2e-06

>ref|XP_011075762.1| PREDICTED: RNA polymerase sigma factor sigA [Sesamum indicum]
          Length = 505

 Score = 60.5 bits (145), Expect = 2e-06
 Identities = 64/189 (33%), Positives = 84/189 (44%), Gaps = 29/189 (15%)
 Frame = -3

Query: 482 SGKRLLLVGSTSYYSDLPEKFGCSXXXXXXXXXXXA-VSAKKSASHINI--PP---RRAR 321
           +GKRLLL  ST  YSDL +K  C+             ++AKKS++ I+   PP   R  +
Sbjct: 13  TGKRLLL-SSTFSYSDLSDKLACTTDPHYQIASTKNAITAKKSSNFISNRRPPASVRALK 71

Query: 320 EHAD-------LEQWLTHGSTXXXXXXXXXXXXXXXXXXXLQKSMLEKQWNLAPKIHGD- 165
           EH D       LE WL HGST                    QKSMLEKQWNL+ +     
Sbjct: 72  EHVDTASNNCTLEPWLIHGSTLSTDETTDPEYLVDAVLLL-QKSMLEKQWNLSAETTTKA 130

Query: 164 --EDDRV-----ITCSGSTAXXXXXXXXRK----KQPPSQPASARSIEELI----LHSSL 30
               DR      +TCSG++A        +K    K P SQ  ++R    ++    L + L
Sbjct: 131 VIPKDRARNKIEVTCSGTSARRRRMDSRKKILGRKFPASQLTTSRQWRSIVSPELLQNRL 190

Query: 29  KGGGYYAKG 3
           KG   Y KG
Sbjct: 191 KG---YVKG 196