BLASTX nr result
ID: Perilla23_contig00004496
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Perilla23_contig00004496
(608 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011078905.1| PREDICTED: RING-H2 finger protein ATL79-like... 197 3e-48
ref|XP_012828042.1| PREDICTED: RING-H2 finger protein ATL79-like... 176 9e-42
ref|XP_011075243.1| PREDICTED: RING-H2 finger protein ATL79-like... 176 1e-41
ref|XP_008437481.1| PREDICTED: RING-H2 finger protein ATL79-like... 148 3e-33
ref|XP_004145965.1| PREDICTED: RING-H2 finger protein ATL79-like... 146 1e-32
ref|XP_002277530.1| PREDICTED: RING-H2 finger protein ATL79 [Vit... 139 9e-31
ref|XP_007039274.1| RING-H2 finger protein ATL79, putative [Theo... 137 5e-30
ref|XP_012486608.1| PREDICTED: RING-H2 finger protein ATL79-like... 135 2e-29
ref|XP_006439165.1| hypothetical protein CICLE_v10021802mg [Citr... 133 7e-29
ref|XP_006476237.1| PREDICTED: RING-H2 finger protein ATL79-like... 132 1e-28
ref|XP_002300529.2| hypothetical protein POPTR_0001s45800g [Popu... 131 3e-28
ref|XP_006279501.1| hypothetical protein CARUB_v10027259mg [Caps... 130 6e-28
ref|XP_010494998.1| PREDICTED: RING-H2 finger protein ATL79-like... 130 7e-28
ref|XP_010481302.1| PREDICTED: RING-H2 finger protein ATL79 [Cam... 130 7e-28
gb|EPS67320.1| hypothetical protein M569_07456 [Genlisea aurea] 129 2e-27
emb|CDY40555.1| BnaC02g33370D [Brassica napus] 128 2e-27
gb|ABD64996.1| RNA recognition motif. (a.k.a. RRM, RBD, or RNP d... 128 2e-27
ref|XP_013716024.1| PREDICTED: RING-H2 finger protein ATL79-like... 128 3e-27
ref|XP_013621054.1| PREDICTED: RING-H2 finger protein ATL79-like... 128 3e-27
ref|XP_009128983.1| PREDICTED: RING-H2 finger protein ATL79-like... 128 3e-27
>ref|XP_011078905.1| PREDICTED: RING-H2 finger protein ATL79-like [Sesamum indicum]
Length = 184
Score = 197 bits (502), Expect = 3e-48
Identities = 101/174 (58%), Positives = 120/174 (68%), Gaps = 22/174 (12%)
Frame = +2
Query: 143 MRPIPSPATA------EFRIHLSPQ------PSAKCDDQNCPWRPYSNSRDFKANTALVL 286
MR PS T+ E IHL+P PS KCD CPW PYS+S+DFK NTALVL
Sbjct: 1 MRQKPSVGTSGAAPKPELSIHLAPPATTAPPPSPKCDAHKCPWWPYSSSKDFKVNTALVL 60
Query: 287 IFLFCTLICGLAINFASKQL----CMRRRRI-----QPPDISCAAKEKEAEIPALIYSEE 439
+FLFCTLIC A N A + + C RRR++ Q P++ C +EKEAE+PA+IYSE
Sbjct: 61 VFLFCTLICAAAFNVAVRYIIRLHCARRRQLREPPNQKPELGCDTEEKEAEVPAVIYSEG 120
Query: 440 MKLAA-VAECAICLSEFVVGERIKVLEMCSHGFHMQCIERWLISCSSCPICRAN 598
+KL AECAICLSEF VGERI+VLE C HGFH+QCI+RWL+SCSSCP CRAN
Sbjct: 121 VKLVGGAAECAICLSEFAVGERIRVLEECGHGFHVQCIKRWLVSCSSCPTCRAN 174
>ref|XP_012828042.1| PREDICTED: RING-H2 finger protein ATL79-like [Erythranthe guttatus]
gi|604298738|gb|EYU18740.1| hypothetical protein
MIMGU_mgv1a024730mg [Erythranthe guttata]
Length = 183
Score = 176 bits (446), Expect = 9e-42
Identities = 94/170 (55%), Positives = 114/170 (67%), Gaps = 20/170 (11%)
Frame = +2
Query: 143 MRPIPS------PATAEFRIHLSPQPSAK---------CDDQNCPWRPYSNSRDFKANTA 277
MR IPS ATAEF IHLSP SA C+ Q CPW PY++++DFKANTA
Sbjct: 1 MRKIPSLRAGVAVATAEFNIHLSPPASAAAPPPLAAADCNAQKCPWWPYTSAKDFKANTA 60
Query: 278 LVLIFLFCTLICGLAINFASKQLCM----RRRRIQPPDISCAAKEKEAEIPALIYSEEMK 445
+++ LFC LIC LA+N A + L RRRR + + AA E+ AEIP +IYSEE K
Sbjct: 61 IIVAVLFCALICALALNAAVRYLIRDCSRRRRRNRKEEHGGAAAEEAAEIPGVIYSEETK 120
Query: 446 LA-AVAECAICLSEFVVGERIKVLEMCSHGFHMQCIERWLISCSSCPICR 592
L+ A EC ICLSEF GERI+VLE CSHGFH+QCI++WL+S SSCP CR
Sbjct: 121 LSGAETECIICLSEFAAGERIRVLEKCSHGFHLQCIQKWLVSHSSCPTCR 170
>ref|XP_011075243.1| PREDICTED: RING-H2 finger protein ATL79-like [Sesamum indicum]
Length = 192
Score = 176 bits (445), Expect = 1e-41
Identities = 96/182 (52%), Positives = 116/182 (63%), Gaps = 30/182 (16%)
Frame = +2
Query: 143 MRPIPSPAT------AEFRIHLSPQ-------------PSA--KCDDQNCPWRPYSNSRD 259
MR +PS T AEF IHLSP P+A CD Q CPW PYS+S+D
Sbjct: 1 MRKVPSLGTEAAVAMAEFNIHLSPPITTSTLAAPPHWPPAAPGNCDAQKCPWWPYSSSKD 60
Query: 260 FKANTALVLIFLFCTLICGLAINFASKQL----CMRRRRIQPPDISC----AAKEKEAEI 415
FK NTAL+L+ LFC LICGLA N A + + C RRR+ + D AA E+ AEI
Sbjct: 61 FKTNTALILVVLFCALICGLAFNAAIRYIISLHCSRRRQREASDEKADTGGAAAEQAAEI 120
Query: 416 PALIYSEEMKLA-AVAECAICLSEFVVGERIKVLEMCSHGFHMQCIERWLISCSSCPICR 592
P++IYSE MKL A EC ICLSEF +GE+I+VLE C+HGFH+ CI+RWL+S SSCP CR
Sbjct: 121 PSVIYSEGMKLTGADTECIICLSEFAIGEKIRVLEKCNHGFHLHCIQRWLVSHSSCPTCR 180
Query: 593 AN 598
N
Sbjct: 181 TN 182
>ref|XP_008437481.1| PREDICTED: RING-H2 finger protein ATL79-like [Cucumis melo]
Length = 182
Score = 148 bits (373), Expect = 3e-33
Identities = 79/163 (48%), Positives = 100/163 (61%), Gaps = 17/163 (10%)
Frame = +2
Query: 155 PSPATAEFRIHLSPQPSAKCDD-QNCPWRPYSNSRDFKANTALVLIFLFCTLICGLAINF 331
P+P A+ + P PS C D + C WRPYSNSRDF+AN A+V+I L C LIC LA+N
Sbjct: 3 PTPLDADETVRFQPPPSPPCHDLRACTWRPYSNSRDFEANAAVVVIILLCGLICALALNT 62
Query: 332 ASKQLCMRRRRIQPPDISCAAKEKEAE-------------IPALIYSEEMK---LAAVAE 463
A + C RRR D S ++++E + PAL++S EMK A AE
Sbjct: 63 AIR--CFLRRRGTSDDDSNDSRQEELQEETKPTLVEKLKMAPALVFSAEMKPKLAGAEAE 120
Query: 464 CAICLSEFVVGERIKVLEMCSHGFHMQCIERWLISCSSCPICR 592
C ICL+EF GE I+VL +C HGFH+QCI+ WLIS SSCP CR
Sbjct: 121 CTICLTEFSEGEEIRVLAICKHGFHVQCIQTWLISHSSCPTCR 163
>ref|XP_004145965.1| PREDICTED: RING-H2 finger protein ATL79-like [Cucumis sativus]
gi|700194775|gb|KGN49952.1| hypothetical protein
Csa_5G146260 [Cucumis sativus]
Length = 182
Score = 146 bits (368), Expect = 1e-32
Identities = 78/163 (47%), Positives = 99/163 (60%), Gaps = 17/163 (10%)
Frame = +2
Query: 155 PSPATAEFRIHLSPQPSAKCDD-QNCPWRPYSNSRDFKANTALVLIFLFCTLICGLAINF 331
P+P A+ + P PS C D + C WRPYS+SRDF+AN A+V+I L C LIC LA+N
Sbjct: 3 PTPLDADDTVRFQPPPSPPCHDLRACTWRPYSSSRDFEANAAVVVIILLCGLICALALNT 62
Query: 332 ASKQLCMRRRRIQPPDISCAAKEKEAE-------------IPALIYSEEMK---LAAVAE 463
A + C RRR D S ++++E PAL++S EMK A AE
Sbjct: 63 AIR--CFLRRRGTSDDDSSDSRQEELPEETKPTLMDKLKMAPALVFSAEMKPKLAGAEAE 120
Query: 464 CAICLSEFVVGERIKVLEMCSHGFHMQCIERWLISCSSCPICR 592
C ICL+EF GE I+VL +C HGFH+QCI+ WLIS SSCP CR
Sbjct: 121 CTICLTEFSEGEEIRVLSICKHGFHVQCIQTWLISHSSCPTCR 163
>ref|XP_002277530.1| PREDICTED: RING-H2 finger protein ATL79 [Vitis vinifera]
Length = 187
Score = 139 bits (351), Expect = 9e-31
Identities = 73/160 (45%), Positives = 98/160 (61%), Gaps = 15/160 (9%)
Frame = +2
Query: 164 ATAEFRIHLSP---QPSAKCDDQN--CPWRPYSNSRDFKANTALVLIFLFCTLICGLAIN 328
A E+ + +SP A+C+ + C W+PY+N++DF+AN A++LI LFC LI L +N
Sbjct: 8 AEEEYPVRVSPPQFSTPARCESSSHDCRWQPYANAKDFEANAAMILIILFCALISALILN 67
Query: 329 FASKQLCMRRRRIQPP---------DISCAAKEKEAEIPALIYSEEMKLA-AVAECAICL 478
+ RR +PP S AA +K+ P L++S MKLA A AECAICL
Sbjct: 68 AVIRCFLSSRRSSRPPPSLPEVQLDSSSMAAADKQVAPPTLVFSSGMKLAGAEAECAICL 127
Query: 479 SEFVVGERIKVLEMCSHGFHMQCIERWLISCSSCPICRAN 598
SEFV GE I+V+ C HGFH+QCI+ WL S SSCP CR +
Sbjct: 128 SEFVEGEGIRVMGQCKHGFHVQCIQEWLSSHSSCPTCRGS 167
>ref|XP_007039274.1| RING-H2 finger protein ATL79, putative [Theobroma cacao]
gi|508776519|gb|EOY23775.1| RING-H2 finger protein
ATL79, putative [Theobroma cacao]
Length = 211
Score = 137 bits (345), Expect = 5e-30
Identities = 81/181 (44%), Positives = 104/181 (57%), Gaps = 29/181 (16%)
Frame = +2
Query: 143 MRPIPSPATAEFRIHLSPQPSA-----------KCDDQNCPWRPYSNSRDFKANTALVLI 289
MRP P+ TA+ IH+SP S+ C+ C WRPYS+S DF+AN A+VLI
Sbjct: 1 MRPPPAE-TAQHLIHMSPPLSSGEPQLSSTSTSTCNPHTCGWRPYSSSNDFEANAAMVLI 59
Query: 290 FLFCTLICGLAINFASKQLCM----RRRRIQPPDISCAAKEKEAE-------------IP 418
LFC LIC LA+N A + R R+ + +I +E E P
Sbjct: 60 ILFCALICSLALNAAIRCFLRGGGGRPRQFRHNNIPQTQQELEQRKPVPEVAAASMVAAP 119
Query: 419 ALIYSEEMKLA-AVAECAICLSEFVVGERIKVLEMCSHGFHMQCIERWLISCSSCPICRA 595
L+Y+ +KLA A AECAICLSEFV GE I+VL C HGFH+QCI++WL S SCP CR+
Sbjct: 120 TLVYTTGLKLAGAEAECAICLSEFVEGEGIQVLAKCKHGFHVQCIQQWLSSHFSCPTCRS 179
Query: 596 N 598
+
Sbjct: 180 S 180
>ref|XP_012486608.1| PREDICTED: RING-H2 finger protein ATL79-like [Gossypium raimondii]
gi|763770218|gb|KJB37433.1| hypothetical protein
B456_006G204000 [Gossypium raimondii]
Length = 205
Score = 135 bits (339), Expect = 2e-29
Identities = 85/181 (46%), Positives = 99/181 (54%), Gaps = 29/181 (16%)
Frame = +2
Query: 143 MRPIPSPATAEFRIHLSPQPSA-----------KCDDQNCPWRPYSNSRDFKANTALVLI 289
MRP P AT E + LSPQ S+ C C WR Y S D +AN A VLI
Sbjct: 1 MRPQPQ-ATGERLVRLSPQLSSGEPEMSSTSTSTCSPHTCRWRSYPKSNDLEANVATVLI 59
Query: 290 FLFCTLICGLAINFASKQLCM----RRRRIQPPDISCAAKEKEAE-------------IP 418
LFC LIC LA+N A + RR R DI+ A +E E P
Sbjct: 60 ILFCGLICSLALNAAIRCFLRGSEGRRPRHFRNDIAEADEEVEQRKPVGEAGAALMVGAP 119
Query: 419 ALIYSEEMKLA-AVAECAICLSEFVVGERIKVLEMCSHGFHMQCIERWLISCSSCPICRA 595
L+Y+ MKLA A AECAICLSEFV GE I+VL C+HGFH+QCI+RWL S SSCP CR
Sbjct: 120 TLVYTSGMKLAGAEAECAICLSEFVEGEGIQVLAKCNHGFHVQCIQRWLSSRSSCPTCRC 179
Query: 596 N 598
+
Sbjct: 180 S 180
>ref|XP_006439165.1| hypothetical protein CICLE_v10021802mg [Citrus clementina]
gi|557541427|gb|ESR52405.1| hypothetical protein
CICLE_v10021802mg [Citrus clementina]
Length = 256
Score = 133 bits (335), Expect = 7e-29
Identities = 78/183 (42%), Positives = 100/183 (54%), Gaps = 26/183 (14%)
Frame = +2
Query: 128 QEKRKMRPIPSPATAEFRIHLSPQPSAKC--------DDQNCPWRPYSNSRD-FKANTAL 280
+ K KMRP+PSP TA + P+A D C W+PYSNS D F+AN L
Sbjct: 58 KHKIKMRPLPSPPTALAKNQSLSYPAAAAAATSTCGLDQDTCKWKPYSNSSDAFEANATL 117
Query: 281 VLIFLFCTLICGLAINFA-------SKQLCMRRRRIQPPDISCAAKEKEAEIPA------ 421
+LI LFC L C LA+N A + +RR P + +++ P+
Sbjct: 118 ILIVLFCALTCALALNTAIRCFLRDNNNYDQQRRTPSPSPQNQHQQQRNNNKPSAEAAAA 177
Query: 422 ---LIYSEEMKLA-AVAECAICLSEFVVGERIKVLEMCSHGFHMQCIERWLISCSSCPIC 589
++YS +KL A AEC ICLSEFV G+ I+VLE C HGFH QCI++WL S SCPIC
Sbjct: 178 PTLVVYSAGIKLTGAEAECVICLSEFVAGDVIQVLERCKHGFHSQCIQKWLYSHYSCPIC 237
Query: 590 RAN 598
R N
Sbjct: 238 RCN 240
>ref|XP_006476237.1| PREDICTED: RING-H2 finger protein ATL79-like [Citrus sinensis]
Length = 256
Score = 132 bits (333), Expect = 1e-28
Identities = 78/183 (42%), Positives = 100/183 (54%), Gaps = 26/183 (14%)
Frame = +2
Query: 128 QEKRKMRPIPSPATAEFRIHLSPQPSAKC--------DDQNCPWRPYSNSRD-FKANTAL 280
+ K KMRP+PSP TA + P+A D C W+PYSNS D F+AN L
Sbjct: 58 KHKIKMRPLPSPPTALAKNQSLSYPAAAAAATSTCGLDQDTCKWKPYSNSSDAFEANATL 117
Query: 281 VLIFLFCTLICGLAINFA-------SKQLCMRRRRIQPPDISCAAKEKEAEIPA------ 421
+LI LFC L C LA+N A + +RR P + +++ P+
Sbjct: 118 ILIVLFCALTCALALNTAIRCFLRDNNNYDQQRRTPSPSPQNQHQQQRNNNKPSAEAAAA 177
Query: 422 ---LIYSEEMKLA-AVAECAICLSEFVVGERIKVLEMCSHGFHMQCIERWLISCSSCPIC 589
++YS +KL A AEC ICLSEFV G+ I+VLE C HGFH QCI++WL S SCPIC
Sbjct: 178 HTLVVYSAGIKLTGAEAECVICLSEFVEGDVIQVLERCKHGFHSQCIQKWLYSHYSCPIC 237
Query: 590 RAN 598
R N
Sbjct: 238 RCN 240
>ref|XP_002300529.2| hypothetical protein POPTR_0001s45800g [Populus trichocarpa]
gi|550349971|gb|EEE85334.2| hypothetical protein
POPTR_0001s45800g [Populus trichocarpa]
Length = 216
Score = 131 bits (329), Expect = 3e-28
Identities = 78/169 (46%), Positives = 96/169 (56%), Gaps = 19/169 (11%)
Frame = +2
Query: 143 MRPIP--SPATAEFRIHLSPQP----SAKCDDQ--NCPWRPYSNSRDFKANTALVLIFLF 298
MRP P + A A HLSP P + CD Q +C W PYSNS DF ANTA++LI L
Sbjct: 1 MRPAPLEAEAAAANISHLSPPPLHSRAPSCDPQVHSCKWWPYSNSNDFGANTAMILIILL 60
Query: 299 CTLICGLAINFASKQLCMRRRRIQPPDISCAAKEK----EAEIPALI------YSEEMKL 448
C LIC L +N A + + +++ EA++ L+ YS MKL
Sbjct: 61 CALICALVLNTAIRWFLRSNNNNSSDRLGELEEQRKPKDEADMATLVLATTQVYSAGMKL 120
Query: 449 AAV-AECAICLSEFVVGERIKVLEMCSHGFHMQCIERWLISCSSCPICR 592
V A+CAICLSEFV GE I+VL C HGFH+ CIE+WL S SSCP CR
Sbjct: 121 GGVEADCAICLSEFVEGEGIRVLGRCDHGFHVLCIEKWLSSHSSCPTCR 169
>ref|XP_006279501.1| hypothetical protein CARUB_v10027259mg [Capsella rubella]
gi|482548205|gb|EOA12399.1| hypothetical protein
CARUB_v10027259mg [Capsella rubella]
Length = 166
Score = 130 bits (327), Expect = 6e-28
Identities = 67/142 (47%), Positives = 89/142 (62%), Gaps = 5/142 (3%)
Frame = +2
Query: 188 LSPQPSAKCDDQNCPWRPYSNSRDFKANTALVLIFLFCTLICGLAINFASKQLCMRRRRI 367
LSP + C+ +C W+PYSNS DF AN +++LI +F LIC L++ A + C R +
Sbjct: 12 LSPASTPACNSHSCRWKPYSNSSDFTANASVLLILVFSALICALSLYTAIR--CFLRPAL 69
Query: 368 QPPDISCAAKE----KEAEIPALIYSEEMKLA-AVAECAICLSEFVVGERIKVLEMCSHG 532
+ D E A P L+YS +++LA A AECAICLSEF GE I+VLE C HG
Sbjct: 70 ETNDDHKPEPETVASSAAPTPTLVYSSDLELAGAEAECAICLSEFEQGESIQVLEKCQHG 129
Query: 533 FHMQCIERWLISCSSCPICRAN 598
FH++CI +WL S SSCP CR +
Sbjct: 130 FHVKCIHKWLSSRSSCPTCRTS 151
>ref|XP_010494998.1| PREDICTED: RING-H2 finger protein ATL79-like [Camelina sativa]
Length = 169
Score = 130 bits (326), Expect = 7e-28
Identities = 68/143 (47%), Positives = 88/143 (61%), Gaps = 6/143 (4%)
Frame = +2
Query: 188 LSPQPSAKCDDQNCPWRPYSNSRDFKANTALVLIFLFCTLICGLAINFASKQLCMRRRRI 367
LS + C+ C W+PYSNS DF AN +++LI L LIC L++ A + C R +
Sbjct: 12 LSSAATPTCNSHTCRWKPYSNSTDFTANASVLLILLVSALICALSLYAAIR--CFLRPTL 69
Query: 368 QP-----PDISCAAKEKEAEIPALIYSEEMKLA-AVAECAICLSEFVVGERIKVLEMCSH 529
+ PD AA A P L+YS +++LA A AECAICLSEF GE I+VLE C H
Sbjct: 70 ETNEDHKPDDPEAAASSAAPTPTLVYSSDLELAGAEAECAICLSEFEQGESIQVLEKCQH 129
Query: 530 GFHMQCIERWLISCSSCPICRAN 598
GFH++CI +WL S SSCP CR +
Sbjct: 130 GFHVKCIHKWLSSRSSCPTCRTS 152
>ref|XP_010481302.1| PREDICTED: RING-H2 finger protein ATL79 [Camelina sativa]
Length = 167
Score = 130 bits (326), Expect = 7e-28
Identities = 68/143 (47%), Positives = 88/143 (61%), Gaps = 6/143 (4%)
Frame = +2
Query: 188 LSPQPSAKCDDQNCPWRPYSNSRDFKANTALVLIFLFCTLICGLAINFASKQLCMRRRRI 367
LS + C+ C W+PYSNS DF AN +++LI L LIC L++ A + C R +
Sbjct: 12 LSSAATPTCNSHTCRWKPYSNSTDFTANASVLLILLVSALICALSLYAAIR--CFLRPTL 69
Query: 368 QP-----PDISCAAKEKEAEIPALIYSEEMKLA-AVAECAICLSEFVVGERIKVLEMCSH 529
+ PD AA A P L+YS +++LA A AECAICLSEF GE I+VLE C H
Sbjct: 70 ETNEDHKPDDPEAAASSAAPTPTLVYSSDLELAGAEAECAICLSEFEQGESIQVLEKCQH 129
Query: 530 GFHMQCIERWLISCSSCPICRAN 598
GFH++CI +WL S SSCP CR +
Sbjct: 130 GFHVKCIHKWLSSRSSCPTCRTS 152
>gb|EPS67320.1| hypothetical protein M569_07456 [Genlisea aurea]
Length = 164
Score = 129 bits (323), Expect = 2e-27
Identities = 63/144 (43%), Positives = 87/144 (60%), Gaps = 3/144 (2%)
Frame = +2
Query: 173 EFRIHLSPQP-SAKCDDQNCPWRPYSNSRDFKANTALVLIFLFCTLICGLAINFASKQLC 349
E I P P S C + CPW PYS+S+DF++N A+++ LFC A N + L
Sbjct: 21 EIEIRYFPPPKSPPCTSRTCPWWPYSSSKDFRSNAAIIVAVLFCVFALLAAFNAGVRYLI 80
Query: 350 MRRRRIQPPDISCAAKEKEAEIPALIYSEEMKL--AAVAECAICLSEFVVGERIKVLEMC 523
R + +I E EA + +Y++EM++ AEC ICLSEF VGERI++LE C
Sbjct: 81 RVNLRRRKTEIGGRQSEVEA---STVYTDEMRMREGGAAECIICLSEFAVGERIRILEKC 137
Query: 524 SHGFHMQCIERWLISCSSCPICRA 595
SHGFH+QC+++WL+ SCP CRA
Sbjct: 138 SHGFHLQCVQQWLLLHRSCPTCRA 161
>emb|CDY40555.1| BnaC02g33370D [Brassica napus]
Length = 173
Score = 128 bits (322), Expect = 2e-27
Identities = 65/139 (46%), Positives = 91/139 (65%), Gaps = 7/139 (5%)
Frame = +2
Query: 203 SAKCDDQNCPWRPYSNSRDFKANTALVLIFLFCTLICGLAINFASKQLCMRRRRIQPPDI 382
S++C+ +C W+PYSNS DF+AN +++LI +F +LIC L++ A + C R D
Sbjct: 18 SSECNSNSCRWKPYSNSTDFQANASVLLILIFSSLICALSLCAAIR--CFLRPTTPETDD 75
Query: 383 SCAAKEKEAE------IPALIYSEEMKLA-AVAECAICLSEFVVGERIKVLEMCSHGFHM 541
+ + EA+ P L+YS +++LA A AECAICLSEF GE I+VLE C HGFH+
Sbjct: 76 NDHKSDLEADSSFTIPTPTLVYSSDLELAGAEAECAICLSEFEQGESIQVLEKCHHGFHV 135
Query: 542 QCIERWLISCSSCPICRAN 598
+CI +WL S SSCP CR +
Sbjct: 136 KCIHKWLSSRSSCPTCRTS 154
>gb|ABD64996.1| RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) containing
protein [Brassica oleracea]
Length = 587
Score = 128 bits (322), Expect = 2e-27
Identities = 65/139 (46%), Positives = 91/139 (65%), Gaps = 7/139 (5%)
Frame = +2
Query: 203 SAKCDDQNCPWRPYSNSRDFKANTALVLIFLFCTLICGLAINFASKQLCMRRRRIQPPDI 382
S++C+ +C W+PYSNS DF+AN +++LI +F +LIC L++ A + C R D
Sbjct: 432 SSECNSNSCRWKPYSNSTDFQANASVLLILIFSSLICALSLCAAIR--CFLRPTTPETDD 489
Query: 383 SCAAKEKEAE------IPALIYSEEMKLA-AVAECAICLSEFVVGERIKVLEMCSHGFHM 541
+ + EA+ P L+YS +++LA A AECAICLSEF GE I+VLE C HGFH+
Sbjct: 490 NDHKSDLEADSSFTIPTPTLVYSSDLELAGAEAECAICLSEFEQGESIQVLEKCHHGFHV 549
Query: 542 QCIERWLISCSSCPICRAN 598
+CI +WL S SSCP CR +
Sbjct: 550 KCIHKWLSSRSSCPTCRTS 568
>ref|XP_013716024.1| PREDICTED: RING-H2 finger protein ATL79-like [Brassica napus]
Length = 173
Score = 128 bits (321), Expect = 3e-27
Identities = 65/139 (46%), Positives = 90/139 (64%), Gaps = 7/139 (5%)
Frame = +2
Query: 203 SAKCDDQNCPWRPYSNSRDFKANTALVLIFLFCTLICGLAINFASKQLCMRRRRIQPPDI 382
S++C+ +C W+PYSNS DF+AN +++LI +F LIC L++ A + C R D
Sbjct: 18 SSECNSNSCRWKPYSNSTDFQANASVLLILIFSALICALSLCAAIR--CFLRPTTPESDD 75
Query: 383 SCAAKEKEAE------IPALIYSEEMKLA-AVAECAICLSEFVVGERIKVLEMCSHGFHM 541
+ + EA+ P L+YS +++LA A AECAICLSEF GE I+VLE C HGFH+
Sbjct: 76 NDHKSDLEADSSFTIPTPTLVYSSDLELAGAEAECAICLSEFEQGESIQVLEKCHHGFHV 135
Query: 542 QCIERWLISCSSCPICRAN 598
+CI +WL S SSCP CR +
Sbjct: 136 KCIHKWLSSRSSCPTCRTS 154
>ref|XP_013621054.1| PREDICTED: RING-H2 finger protein ATL79-like [Brassica oleracea
var. oleracea]
Length = 173
Score = 128 bits (321), Expect = 3e-27
Identities = 65/139 (46%), Positives = 90/139 (64%), Gaps = 7/139 (5%)
Frame = +2
Query: 203 SAKCDDQNCPWRPYSNSRDFKANTALVLIFLFCTLICGLAINFASKQLCMRRRRIQPPDI 382
S++C+ +C W+PYSNS DF+AN +++LI +F LIC L++ A + C R D
Sbjct: 18 SSECNSNSCRWKPYSNSTDFQANASVLLILIFSALICALSLCAAIR--CFLRPTTPETDD 75
Query: 383 SCAAKEKEAE------IPALIYSEEMKLA-AVAECAICLSEFVVGERIKVLEMCSHGFHM 541
+ + EA+ P L+YS +++LA A AECAICLSEF GE I+VLE C HGFH+
Sbjct: 76 NDHKSDLEADSSFTIPTPTLVYSSDLELAGAEAECAICLSEFEQGESIQVLEKCHHGFHV 135
Query: 542 QCIERWLISCSSCPICRAN 598
+CI +WL S SSCP CR +
Sbjct: 136 KCIHKWLSSRSSCPTCRTS 154
>ref|XP_009128983.1| PREDICTED: RING-H2 finger protein ATL79-like [Brassica rapa]
Length = 177
Score = 128 bits (321), Expect = 3e-27
Identities = 65/139 (46%), Positives = 90/139 (64%), Gaps = 7/139 (5%)
Frame = +2
Query: 203 SAKCDDQNCPWRPYSNSRDFKANTALVLIFLFCTLICGLAINFASKQLCMRRRRIQPPDI 382
S++C+ +C W+PYSNS DF+AN +++LI +F LIC L++ A + C R D
Sbjct: 18 SSECNSNSCRWKPYSNSTDFQANASVLLILIFSALICALSLCAAIR--CFLRPTTPETDD 75
Query: 383 SCAAKEKEAE------IPALIYSEEMKLA-AVAECAICLSEFVVGERIKVLEMCSHGFHM 541
+ + EA+ P L+YS +++LA A AECAICLSEF GE I+VLE C HGFH+
Sbjct: 76 NDHKPDPEADGSFTIPTPTLVYSSDLELAGAEAECAICLSEFEQGESIQVLEKCHHGFHV 135
Query: 542 QCIERWLISCSSCPICRAN 598
+CI +WL S SSCP CR +
Sbjct: 136 KCIHKWLSSRSSCPTCRTS 154