BLASTX nr result
ID: Perilla23_contig00003151
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Perilla23_contig00003151
(675 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011089805.1| PREDICTED: DNA-directed RNA polymerase II su... 345 1e-92
ref|XP_009596971.1| PREDICTED: DNA-directed RNA polymerase II su... 343 6e-92
ref|XP_004240381.1| PREDICTED: DNA-directed RNA polymerase II su... 342 2e-91
dbj|BAJ94721.1| predicted protein [Hordeum vulgare subsp. vulgare] 341 3e-91
emb|CDP09113.1| unnamed protein product [Coffea canephora] 340 5e-91
ref|XP_012840298.1| PREDICTED: DNA-directed RNA polymerase II su... 339 1e-90
ref|XP_010242492.1| PREDICTED: DNA-directed RNA polymerase II su... 338 2e-90
gb|KQL15582.1| hypothetical protein SETIT_022890mg [Setaria ital... 337 3e-90
ref|XP_003568492.1| PREDICTED: DNA-directed RNA polymerase II su... 337 4e-90
dbj|BAK02244.1| predicted protein [Hordeum vulgare subsp. vulgar... 335 1e-89
ref|XP_004150740.1| PREDICTED: DNA-directed RNA polymerase II su... 333 4e-89
ref|NP_001149597.1| DNA-directed RNA polymerase II 19 kDa polype... 333 6e-89
ref|XP_008227149.1| PREDICTED: DNA-directed RNA polymerase II su... 332 1e-88
ref|NP_001055483.1| Os05g0400700 [Oryza sativa Japonica Group] g... 332 1e-88
gb|AKF43215.1| DNA-directed RNA polymerase II non-catalytic subu... 332 1e-88
ref|XP_006654370.1| PREDICTED: DNA-directed RNA polymerase II su... 332 1e-88
ref|XP_007016297.1| DNA-directed RNA polymerase II isoform 1 [Th... 332 1e-88
gb|AFK39298.1| unknown [Lotus japonicus] 332 1e-88
ref|XP_002282298.1| PREDICTED: DNA-directed RNA polymerase II su... 332 1e-88
gb|AKF43239.1| DNA-directed RNA polymerase II non-catalytic subu... 331 2e-88
>ref|XP_011089805.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB7 [Sesamum
indicum] gi|747084765|ref|XP_011089806.1| PREDICTED:
DNA-directed RNA polymerase II subunit RPB7 [Sesamum
indicum] gi|747085755|ref|XP_011090351.1| PREDICTED:
DNA-directed RNA polymerase II subunit RPB7 [Sesamum
indicum] gi|747085757|ref|XP_011090352.1| PREDICTED:
DNA-directed RNA polymerase II subunit RPB7 [Sesamum
indicum] gi|747085759|ref|XP_011090354.1| PREDICTED:
DNA-directed RNA polymerase II subunit RPB7 [Sesamum
indicum] gi|747085761|ref|XP_011090355.1| PREDICTED:
DNA-directed RNA polymerase II subunit RPB7 [Sesamum
indicum]
Length = 177
Score = 345 bits (885), Expect = 1e-92
Identities = 167/175 (95%), Positives = 173/175 (98%)
Frame = -3
Query: 526 MFFHMVLERNMQLHPRHFGRDLRDKLVAKLMKDVEGTCSGHHGFVVAITGIDSVGKGLIR 347
MFFH+VLERNMQLHPRHFGRDLRDKLVAKLMKDVEGTCSG HGF+VAITGI+SVGKGLIR
Sbjct: 1 MFFHIVLERNMQLHPRHFGRDLRDKLVAKLMKDVEGTCSGRHGFIVAITGIESVGKGLIR 60
Query: 346 DGTGFVTFPVKYQCVVFRPFKGEVLEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 167
DGTGFVTFPVKYQCVVFRPFKGE+LEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ
Sbjct: 61 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 120
Query: 166 PGDIPNYTTADGSVKIQKESEVRLKIIGTRVDATEIFCIGTIKDDFLGVISDPGA 2
GDIPNYTT+DGSVKIQK+SEVRLKIIGTRVDATEIFCIGTIKDDFLGVISDPGA
Sbjct: 121 SGDIPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVISDPGA 175
>ref|XP_009596971.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB7 [Nicotiana
tomentosiformis] gi|698471484|ref|XP_009784043.1|
PREDICTED: DNA-directed RNA polymerase II subunit RPB7
[Nicotiana sylvestris]
Length = 177
Score = 343 bits (880), Expect = 6e-92
Identities = 165/175 (94%), Positives = 173/175 (98%)
Frame = -3
Query: 526 MFFHMVLERNMQLHPRHFGRDLRDKLVAKLMKDVEGTCSGHHGFVVAITGIDSVGKGLIR 347
MFFH+VLERNMQLHPRHFGRDLR+KLV+KLMKDVEGTCSG HGF+VAITGI+SVGKGLIR
Sbjct: 1 MFFHIVLERNMQLHPRHFGRDLREKLVSKLMKDVEGTCSGRHGFIVAITGIESVGKGLIR 60
Query: 346 DGTGFVTFPVKYQCVVFRPFKGEVLEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 167
DGTGFVTFPVKYQCVVFRPFKGE+LEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ
Sbjct: 61 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 120
Query: 166 PGDIPNYTTADGSVKIQKESEVRLKIIGTRVDATEIFCIGTIKDDFLGVISDPGA 2
GD+PNYTT+DGSVKIQKESEVRLKIIGTRVDATEIFCIGTIKDDFLGVISDPGA
Sbjct: 121 SGDVPNYTTSDGSVKIQKESEVRLKIIGTRVDATEIFCIGTIKDDFLGVISDPGA 175
>ref|XP_004240381.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB7 [Solanum
lycopersicum] gi|565385656|ref|XP_006358706.1|
PREDICTED: DNA-directed RNA polymerase II subunit
RPB7-like [Solanum tuberosum]
Length = 177
Score = 342 bits (876), Expect = 2e-91
Identities = 164/174 (94%), Positives = 172/174 (98%)
Frame = -3
Query: 526 MFFHMVLERNMQLHPRHFGRDLRDKLVAKLMKDVEGTCSGHHGFVVAITGIDSVGKGLIR 347
MFFH+VLERNMQLHPRHFGRDLR+KLV+KLMKDVEGTCSG HGF+VAITGI+SVGKGLIR
Sbjct: 1 MFFHIVLERNMQLHPRHFGRDLREKLVSKLMKDVEGTCSGRHGFIVAITGIESVGKGLIR 60
Query: 346 DGTGFVTFPVKYQCVVFRPFKGEVLEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 167
DGTGFVTFPVKYQCVVFRPFKGE+LEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ
Sbjct: 61 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 120
Query: 166 PGDIPNYTTADGSVKIQKESEVRLKIIGTRVDATEIFCIGTIKDDFLGVISDPG 5
GD+PNYTT+DGSVKIQKESEVRLKIIGTRVDATEIFCIGTIKDDFLGVISDPG
Sbjct: 121 SGDVPNYTTSDGSVKIQKESEVRLKIIGTRVDATEIFCIGTIKDDFLGVISDPG 174
>dbj|BAJ94721.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 236
Score = 341 bits (874), Expect = 3e-91
Identities = 163/180 (90%), Positives = 174/180 (96%)
Frame = -3
Query: 544 QKERKEMFFHMVLERNMQLHPRHFGRDLRDKLVAKLMKDVEGTCSGHHGFVVAITGIDSV 365
++E +EMFFH+VLERNMQLHPRHFG LRDKLVAKLMKDVEGTCSG HGFVVAITG++ +
Sbjct: 54 EEEEEEMFFHIVLERNMQLHPRHFGPHLRDKLVAKLMKDVEGTCSGRHGFVVAITGVEDI 113
Query: 364 GKGLIRDGTGFVTFPVKYQCVVFRPFKGEVLEAVVTMVNKMGFFAEAGPVQIFVSNHLIP 185
GKGLIR+GTGFVTFPVKYQCVVFRPFKGE+LEAVVTMVNKMGFFAEAGPVQIFVSNHLIP
Sbjct: 114 GKGLIREGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIP 173
Query: 184 DDMEFQPGDIPNYTTADGSVKIQKESEVRLKIIGTRVDATEIFCIGTIKDDFLGVISDPG 5
DDMEFQ GD+PNYTT+DGSVKIQKESEVRLKIIGTRVDATEIFCIGTIKDDFLGVISDPG
Sbjct: 174 DDMEFQSGDVPNYTTSDGSVKIQKESEVRLKIIGTRVDATEIFCIGTIKDDFLGVISDPG 233
>emb|CDP09113.1| unnamed protein product [Coffea canephora]
Length = 177
Score = 340 bits (872), Expect = 5e-91
Identities = 164/175 (93%), Positives = 172/175 (98%)
Frame = -3
Query: 526 MFFHMVLERNMQLHPRHFGRDLRDKLVAKLMKDVEGTCSGHHGFVVAITGIDSVGKGLIR 347
MFFH+VLERNMQLHPRHFGRDLRDKLV+KLMKDVEGTCSG HGFVVAITGI+SVGKGLIR
Sbjct: 1 MFFHIVLERNMQLHPRHFGRDLRDKLVSKLMKDVEGTCSGRHGFVVAITGIESVGKGLIR 60
Query: 346 DGTGFVTFPVKYQCVVFRPFKGEVLEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 167
DGTGFVTFPVKY CVVFRPFKGE+LEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ
Sbjct: 61 DGTGFVTFPVKYLCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 120
Query: 166 PGDIPNYTTADGSVKIQKESEVRLKIIGTRVDATEIFCIGTIKDDFLGVISDPGA 2
GD+PNYTT+DGSVKIQK+SEVRLKIIGTRVDATEIFCIGTIKDDFLGVISDPG+
Sbjct: 121 SGDVPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVISDPGS 175
>ref|XP_012840298.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB7 [Erythranthe
guttatus] gi|848879827|ref|XP_012840299.1| PREDICTED:
DNA-directed RNA polymerase II subunit RPB7 [Erythranthe
guttatus] gi|848879829|ref|XP_012840300.1| PREDICTED:
DNA-directed RNA polymerase II subunit RPB7 [Erythranthe
guttatus] gi|604329753|gb|EYU34943.1| hypothetical
protein MIMGU_mgv1a014812mg [Erythranthe guttata]
Length = 177
Score = 339 bits (869), Expect = 1e-90
Identities = 160/175 (91%), Positives = 173/175 (98%)
Frame = -3
Query: 526 MFFHMVLERNMQLHPRHFGRDLRDKLVAKLMKDVEGTCSGHHGFVVAITGIDSVGKGLIR 347
MFFH+VLERNMQLHPRHFGRD++DKLV+KLMKDVEGTCSG HGF+VAITG++S+GKGLIR
Sbjct: 1 MFFHIVLERNMQLHPRHFGRDMKDKLVSKLMKDVEGTCSGRHGFIVAITGVESIGKGLIR 60
Query: 346 DGTGFVTFPVKYQCVVFRPFKGEVLEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 167
DGTGFVTFPVKYQCVVFRPFKGE+LEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ
Sbjct: 61 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 120
Query: 166 PGDIPNYTTADGSVKIQKESEVRLKIIGTRVDATEIFCIGTIKDDFLGVISDPGA 2
GD+PNYTT+DGSV+IQKESEVRLKIIGTRVDATEIFCIGTIKDDFLGVISDPG+
Sbjct: 121 TGDMPNYTTSDGSVRIQKESEVRLKIIGTRVDATEIFCIGTIKDDFLGVISDPGS 175
>ref|XP_010242492.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB7 [Nelumbo
nucifera] gi|720082116|ref|XP_010242493.1| PREDICTED:
DNA-directed RNA polymerase II subunit RPB7 [Nelumbo
nucifera] gi|720082119|ref|XP_010242494.1| PREDICTED:
DNA-directed RNA polymerase II subunit RPB7 [Nelumbo
nucifera]
Length = 177
Score = 338 bits (867), Expect = 2e-90
Identities = 162/175 (92%), Positives = 172/175 (98%)
Frame = -3
Query: 526 MFFHMVLERNMQLHPRHFGRDLRDKLVAKLMKDVEGTCSGHHGFVVAITGIDSVGKGLIR 347
MFFH+VLERNMQLHPRHFG +LRDKLVAKLMKDVEGTCSG HGFVVAITG+D++GKGLIR
Sbjct: 1 MFFHIVLERNMQLHPRHFGPNLRDKLVAKLMKDVEGTCSGRHGFVVAITGVDNIGKGLIR 60
Query: 346 DGTGFVTFPVKYQCVVFRPFKGEVLEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 167
DGTGFVTFPVKYQCVVFRPFKGE+LEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ
Sbjct: 61 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 120
Query: 166 PGDIPNYTTADGSVKIQKESEVRLKIIGTRVDATEIFCIGTIKDDFLGVISDPGA 2
GD+PNYTT+DGSVKIQK+SEVRLKIIGTRVDATEIFCIGTIKDDFLGVI+DPGA
Sbjct: 121 SGDMPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDPGA 175
>gb|KQL15582.1| hypothetical protein SETIT_022890mg [Setaria italica]
Length = 283
Score = 337 bits (865), Expect = 3e-90
Identities = 161/179 (89%), Positives = 173/179 (96%)
Frame = -3
Query: 538 ERKEMFFHMVLERNMQLHPRHFGRDLRDKLVAKLMKDVEGTCSGHHGFVVAITGIDSVGK 359
ER +MFFH+VLERNMQLHPRHFG LRDKLV+KL+KDVEGTCSG HGFVVAITG++ +GK
Sbjct: 103 ERSKMFFHIVLERNMQLHPRHFGPHLRDKLVSKLIKDVEGTCSGRHGFVVAITGVEDIGK 162
Query: 358 GLIRDGTGFVTFPVKYQCVVFRPFKGEVLEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDD 179
GLIR+GTG+VTFPVKYQCVVFRPFKGE+LEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDD
Sbjct: 163 GLIREGTGYVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDD 222
Query: 178 MEFQPGDIPNYTTADGSVKIQKESEVRLKIIGTRVDATEIFCIGTIKDDFLGVISDPGA 2
MEFQ GD+PNYTT+DGSVKIQKESEVRLKIIGTRVDATEIFCIGTIKDDFLGVISDPGA
Sbjct: 223 MEFQSGDVPNYTTSDGSVKIQKESEVRLKIIGTRVDATEIFCIGTIKDDFLGVISDPGA 281
>ref|XP_003568492.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB7
[Brachypodium distachyon] gi|944070871|gb|KQK06355.1|
hypothetical protein BRADI_2g25940 [Brachypodium
distachyon]
Length = 177
Score = 337 bits (864), Expect = 4e-90
Identities = 162/175 (92%), Positives = 170/175 (97%)
Frame = -3
Query: 526 MFFHMVLERNMQLHPRHFGRDLRDKLVAKLMKDVEGTCSGHHGFVVAITGIDSVGKGLIR 347
MFFH+VLERNMQLHPRHFG LRDKLVAKLMKDVEGTCSG HGFVVAITG++ +GKGLIR
Sbjct: 1 MFFHIVLERNMQLHPRHFGPHLRDKLVAKLMKDVEGTCSGRHGFVVAITGVEDIGKGLIR 60
Query: 346 DGTGFVTFPVKYQCVVFRPFKGEVLEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 167
+GTGFVTFPVKYQCVVFRPFKGE+LEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ
Sbjct: 61 EGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 120
Query: 166 PGDIPNYTTADGSVKIQKESEVRLKIIGTRVDATEIFCIGTIKDDFLGVISDPGA 2
GD+PNYTT+DGSVKIQKESEVRLKIIGTRVDATEIFCIGTIKDDFLGVISDPGA
Sbjct: 121 SGDVPNYTTSDGSVKIQKESEVRLKIIGTRVDATEIFCIGTIKDDFLGVISDPGA 175
>dbj|BAK02244.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326505504|dbj|BAJ95423.1| predicted protein [Hordeum
vulgare subsp. vulgare] gi|475564192|gb|EMT14471.1|
DNA-directed RNA polymerase II subunit RPB7 [Aegilops
tauschii]
Length = 177
Score = 335 bits (860), Expect = 1e-89
Identities = 161/174 (92%), Positives = 169/174 (97%)
Frame = -3
Query: 526 MFFHMVLERNMQLHPRHFGRDLRDKLVAKLMKDVEGTCSGHHGFVVAITGIDSVGKGLIR 347
MFFH+VLERNMQLHPRHFG LRDKLVAKLMKDVEGTCSG HGFVVAITG++ +GKGLIR
Sbjct: 1 MFFHIVLERNMQLHPRHFGPHLRDKLVAKLMKDVEGTCSGRHGFVVAITGVEDIGKGLIR 60
Query: 346 DGTGFVTFPVKYQCVVFRPFKGEVLEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 167
+GTGFVTFPVKYQCVVFRPFKGE+LEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ
Sbjct: 61 EGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 120
Query: 166 PGDIPNYTTADGSVKIQKESEVRLKIIGTRVDATEIFCIGTIKDDFLGVISDPG 5
GD+PNYTT+DGSVKIQKESEVRLKIIGTRVDATEIFCIGTIKDDFLGVISDPG
Sbjct: 121 SGDVPNYTTSDGSVKIQKESEVRLKIIGTRVDATEIFCIGTIKDDFLGVISDPG 174
>ref|XP_004150740.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB7 [Cucumis
sativus] gi|778702031|ref|XP_011655124.1| PREDICTED:
DNA-directed RNA polymerase II subunit RPB7 [Cucumis
sativus] gi|778702034|ref|XP_011655125.1| PREDICTED:
DNA-directed RNA polymerase II subunit RPB7 [Cucumis
sativus] gi|700195707|gb|KGN50884.1| hypothetical
protein Csa_5G312340 [Cucumis sativus]
Length = 176
Score = 333 bits (855), Expect = 4e-89
Identities = 159/175 (90%), Positives = 171/175 (97%)
Frame = -3
Query: 526 MFFHMVLERNMQLHPRHFGRDLRDKLVAKLMKDVEGTCSGHHGFVVAITGIDSVGKGLIR 347
MFFH+VLERNMQLHPRHFGR+LR+ LV+KLMKDVEGTCSG HGFVVAITGI+++GKGLIR
Sbjct: 1 MFFHIVLERNMQLHPRHFGRNLRENLVSKLMKDVEGTCSGRHGFVVAITGIENIGKGLIR 60
Query: 346 DGTGFVTFPVKYQCVVFRPFKGEVLEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 167
DGTGFVTFPVKYQCVVFRPFKGE+LEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ
Sbjct: 61 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 120
Query: 166 PGDIPNYTTADGSVKIQKESEVRLKIIGTRVDATEIFCIGTIKDDFLGVISDPGA 2
GD+PNYTT+DGSVKIQK+SEVRLKIIGTRVDATEIFCIGTIKDDFLGVI+DP A
Sbjct: 121 SGDVPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDPSA 175
>ref|NP_001149597.1| DNA-directed RNA polymerase II 19 kDa polypeptide [Zea mays]
gi|242056199|ref|XP_002457245.1| hypothetical protein
SORBIDRAFT_03g003990 [Sorghum bicolor]
gi|242090461|ref|XP_002441063.1| hypothetical protein
SORBIDRAFT_09g019690 [Sorghum bicolor]
gi|514750630|ref|XP_004962151.1| PREDICTED: DNA-directed
RNA polymerase II subunit RPB7 [Setaria italica]
gi|194708012|gb|ACF88090.1| unknown [Zea mays]
gi|195628342|gb|ACG36001.1| DNA-directed RNA polymerase
II 19 kDa polypeptide [Zea mays]
gi|241929220|gb|EES02365.1| hypothetical protein
SORBIDRAFT_03g003990 [Sorghum bicolor]
gi|241946348|gb|EES19493.1| hypothetical protein
SORBIDRAFT_09g019690 [Sorghum bicolor]
gi|413945277|gb|AFW77926.1| DNA-directed RNA polymerase
II polypeptide [Zea mays]
Length = 177
Score = 333 bits (854), Expect = 6e-89
Identities = 159/175 (90%), Positives = 170/175 (97%)
Frame = -3
Query: 526 MFFHMVLERNMQLHPRHFGRDLRDKLVAKLMKDVEGTCSGHHGFVVAITGIDSVGKGLIR 347
MFFH+VLERNMQLHPRHFG LRDKLV+KL+KDVEGTCSG HGFVVAITG++ +GKGLIR
Sbjct: 1 MFFHIVLERNMQLHPRHFGPHLRDKLVSKLIKDVEGTCSGRHGFVVAITGVEDIGKGLIR 60
Query: 346 DGTGFVTFPVKYQCVVFRPFKGEVLEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 167
+GTG+VTFPVKYQCVVFRPFKGE+LEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ
Sbjct: 61 EGTGYVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 120
Query: 166 PGDIPNYTTADGSVKIQKESEVRLKIIGTRVDATEIFCIGTIKDDFLGVISDPGA 2
GD+PNYTT+DGSVKIQKESEVRLKIIGTRVDATEIFCIGTIKDDFLGVISDPGA
Sbjct: 121 SGDVPNYTTSDGSVKIQKESEVRLKIIGTRVDATEIFCIGTIKDDFLGVISDPGA 175
>ref|XP_008227149.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB7 [Prunus
mume]
Length = 176
Score = 332 bits (852), Expect = 1e-88
Identities = 159/173 (91%), Positives = 170/173 (98%)
Frame = -3
Query: 526 MFFHMVLERNMQLHPRHFGRDLRDKLVAKLMKDVEGTCSGHHGFVVAITGIDSVGKGLIR 347
MFFH+VLERNMQLHPRHFGR+LR+ LVAKLMKDVEGTCSG HGFVVAITGI+++GKGLIR
Sbjct: 1 MFFHIVLERNMQLHPRHFGRNLRENLVAKLMKDVEGTCSGQHGFVVAITGIENIGKGLIR 60
Query: 346 DGTGFVTFPVKYQCVVFRPFKGEVLEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 167
DGTGFVTFPVKYQCVVFRPFKGE+LEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ
Sbjct: 61 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 120
Query: 166 PGDIPNYTTADGSVKIQKESEVRLKIIGTRVDATEIFCIGTIKDDFLGVISDP 8
GD+PNYTT+DGSVKIQK+SEVRLKIIGTRVDATEIFCIGTIKDDFLGVI+DP
Sbjct: 121 SGDMPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDP 173
>ref|NP_001055483.1| Os05g0400700 [Oryza sativa Japonica Group]
gi|50878367|gb|AAT85142.1| putative RNA polymerase II
subunit 5 [Oryza sativa Japonica Group]
gi|113579034|dbj|BAF17397.1| Os05g0400700 [Oryza sativa
Japonica Group] gi|125552268|gb|EAY97977.1| hypothetical
protein OsI_19896 [Oryza sativa Indica Group]
gi|215704281|dbj|BAG93121.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|218196761|gb|EEC79188.1| hypothetical protein
OsI_19893 [Oryza sativa Indica Group]
gi|222631528|gb|EEE63660.1| hypothetical protein
OsJ_18478 [Oryza sativa Japonica Group]
gi|937918996|dbj|BAS93914.1| Os05g0400700 [Oryza sativa
Japonica Group]
Length = 177
Score = 332 bits (852), Expect = 1e-88
Identities = 159/175 (90%), Positives = 170/175 (97%)
Frame = -3
Query: 526 MFFHMVLERNMQLHPRHFGRDLRDKLVAKLMKDVEGTCSGHHGFVVAITGIDSVGKGLIR 347
MFFH+VLERNMQLHPRHFG LRDKLV+KL+KDVEGTCSG HGFVVAITG++ VGKGLIR
Sbjct: 1 MFFHIVLERNMQLHPRHFGPHLRDKLVSKLIKDVEGTCSGRHGFVVAITGVEDVGKGLIR 60
Query: 346 DGTGFVTFPVKYQCVVFRPFKGEVLEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 167
+GTG+VTFPVKYQCVVFRPFKGE+LEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ
Sbjct: 61 EGTGYVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 120
Query: 166 PGDIPNYTTADGSVKIQKESEVRLKIIGTRVDATEIFCIGTIKDDFLGVISDPGA 2
GD+PNYTT+DGSVKIQK+SEVRLKIIGTRVDATEIFCIGTIKDDFLGVISDPGA
Sbjct: 121 SGDVPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVISDPGA 175
>gb|AKF43215.1| DNA-directed RNA polymerase II non-catalytic subunit [California
macrophylla]
Length = 176
Score = 332 bits (851), Expect = 1e-88
Identities = 160/173 (92%), Positives = 169/173 (97%)
Frame = -3
Query: 526 MFFHMVLERNMQLHPRHFGRDLRDKLVAKLMKDVEGTCSGHHGFVVAITGIDSVGKGLIR 347
MFFHMVLERNMQLHPRHFGR+LR+ LV+KLMKDVEGTCSG HGFVVAITGI+SVGKGLIR
Sbjct: 1 MFFHMVLERNMQLHPRHFGRNLRENLVSKLMKDVEGTCSGRHGFVVAITGIESVGKGLIR 60
Query: 346 DGTGFVTFPVKYQCVVFRPFKGEVLEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 167
DGTGFVTFPVKYQCVVFRPFKGE+LEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ
Sbjct: 61 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 120
Query: 166 PGDIPNYTTADGSVKIQKESEVRLKIIGTRVDATEIFCIGTIKDDFLGVISDP 8
GD+PNYTT+D SVKIQK+SEVRLKIIGTRVDATEIFCIGTIKDDFLGVI+DP
Sbjct: 121 SGDMPNYTTSDNSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDP 173
>ref|XP_006654370.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB7-like [Oryza
brachyantha]
Length = 177
Score = 332 bits (851), Expect = 1e-88
Identities = 158/175 (90%), Positives = 170/175 (97%)
Frame = -3
Query: 526 MFFHMVLERNMQLHPRHFGRDLRDKLVAKLMKDVEGTCSGHHGFVVAITGIDSVGKGLIR 347
MFFH+VLERNMQLHPRHFG LRDKLV+KL+KDVEGTCSG HGFVVAITG++ +GKGLIR
Sbjct: 1 MFFHIVLERNMQLHPRHFGPHLRDKLVSKLIKDVEGTCSGRHGFVVAITGVEDIGKGLIR 60
Query: 346 DGTGFVTFPVKYQCVVFRPFKGEVLEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 167
+GTG+VTFPVKYQCVVFRPFKGE+LEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ
Sbjct: 61 EGTGYVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 120
Query: 166 PGDIPNYTTADGSVKIQKESEVRLKIIGTRVDATEIFCIGTIKDDFLGVISDPGA 2
GD+PNYTT+DGSVKIQK+SEVRLKIIGTRVDATEIFCIGTIKDDFLGVISDPGA
Sbjct: 121 SGDVPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVISDPGA 175
>ref|XP_007016297.1| DNA-directed RNA polymerase II isoform 1 [Theobroma cacao]
gi|508786660|gb|EOY33916.1| DNA-directed RNA polymerase
II isoform 1 [Theobroma cacao]
Length = 176
Score = 332 bits (851), Expect = 1e-88
Identities = 160/173 (92%), Positives = 170/173 (98%)
Frame = -3
Query: 526 MFFHMVLERNMQLHPRHFGRDLRDKLVAKLMKDVEGTCSGHHGFVVAITGIDSVGKGLIR 347
MFFH+VLERNMQLHPRHFGR+LR+ LV+KLMKDVEGTCSG HGFVVAITGI++VGKGLIR
Sbjct: 1 MFFHIVLERNMQLHPRHFGRNLRENLVSKLMKDVEGTCSGRHGFVVAITGIENVGKGLIR 60
Query: 346 DGTGFVTFPVKYQCVVFRPFKGEVLEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 167
DGTGFVTFPVKYQCVVFRPFKGEVLEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ
Sbjct: 61 DGTGFVTFPVKYQCVVFRPFKGEVLEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 120
Query: 166 PGDIPNYTTADGSVKIQKESEVRLKIIGTRVDATEIFCIGTIKDDFLGVISDP 8
GD+PNYTT+DGSVKIQK+SEVRLKIIGTRVDATEIFCIGTIKDDFLGVI+DP
Sbjct: 121 SGDMPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDP 173
>gb|AFK39298.1| unknown [Lotus japonicus]
Length = 176
Score = 332 bits (851), Expect = 1e-88
Identities = 160/175 (91%), Positives = 171/175 (97%)
Frame = -3
Query: 526 MFFHMVLERNMQLHPRHFGRDLRDKLVAKLMKDVEGTCSGHHGFVVAITGIDSVGKGLIR 347
MFFH+VLERNMQLHPR+FGR+LRD LVAKLMKDVEGTCSG HGFVVA+TGI++VGKGLIR
Sbjct: 1 MFFHIVLERNMQLHPRYFGRNLRDNLVAKLMKDVEGTCSGRHGFVVAVTGIENVGKGLIR 60
Query: 346 DGTGFVTFPVKYQCVVFRPFKGEVLEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 167
DGTGFVTFPVKYQCVVFRPFKGE+LEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ
Sbjct: 61 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 120
Query: 166 PGDIPNYTTADGSVKIQKESEVRLKIIGTRVDATEIFCIGTIKDDFLGVISDPGA 2
GD+PNYTT+DGSVKIQK+SEVRLKIIGTRVDATEIFCIGTIKDDFLGVI+DP A
Sbjct: 121 SGDMPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDPVA 175
>ref|XP_002282298.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB7 [Vitis
vinifera] gi|147841138|emb|CAN75204.1| hypothetical
protein VITISV_042914 [Vitis vinifera]
gi|297745997|emb|CBI16053.3| unnamed protein product
[Vitis vinifera]
Length = 176
Score = 332 bits (851), Expect = 1e-88
Identities = 160/173 (92%), Positives = 169/173 (97%)
Frame = -3
Query: 526 MFFHMVLERNMQLHPRHFGRDLRDKLVAKLMKDVEGTCSGHHGFVVAITGIDSVGKGLIR 347
MFFH+VLERNMQLHPRHFGR LRD LVAKL+KDVEGTCSG HGFVVAITGI++VGKGLIR
Sbjct: 1 MFFHIVLERNMQLHPRHFGRHLRDNLVAKLVKDVEGTCSGRHGFVVAITGIENVGKGLIR 60
Query: 346 DGTGFVTFPVKYQCVVFRPFKGEVLEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 167
DGTGFVTFPVKYQCVVFRPFKGE+LEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ
Sbjct: 61 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 120
Query: 166 PGDIPNYTTADGSVKIQKESEVRLKIIGTRVDATEIFCIGTIKDDFLGVISDP 8
GD+PNYTT+DGSVKIQK+SEVRLKIIGTRVDATEIFCIGTIKDDFLGVI+DP
Sbjct: 121 SGDMPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDP 173
>gb|AKF43239.1| DNA-directed RNA polymerase II non-catalytic subunit [Pelargonium
tetragonum]
Length = 176
Score = 331 bits (849), Expect = 2e-88
Identities = 160/173 (92%), Positives = 168/173 (97%)
Frame = -3
Query: 526 MFFHMVLERNMQLHPRHFGRDLRDKLVAKLMKDVEGTCSGHHGFVVAITGIDSVGKGLIR 347
MFFH+VLERNMQLHPRHFGR LRD LV+KLMKDVEGTCSG HGFVVAITGI+SVGKGLIR
Sbjct: 1 MFFHIVLERNMQLHPRHFGRTLRDSLVSKLMKDVEGTCSGRHGFVVAITGIESVGKGLIR 60
Query: 346 DGTGFVTFPVKYQCVVFRPFKGEVLEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 167
DGTGFVTFPVKYQCVVFRPFKGE+LEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ
Sbjct: 61 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 120
Query: 166 PGDIPNYTTADGSVKIQKESEVRLKIIGTRVDATEIFCIGTIKDDFLGVISDP 8
GD+PNYTT+D SVKIQK+SEVRLKIIGTRVDATEIFCIGTIKDDFLGVI+DP
Sbjct: 121 SGDMPNYTTSDSSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDP 173