BLASTX nr result

ID: Perilla23_contig00001373 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Perilla23_contig00001373
         (480 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_012837131.1| PREDICTED: pentatricopeptide repeat-containi...   114   4e-23
ref|XP_011088516.1| PREDICTED: pentatricopeptide repeat-containi...   107   3e-21

>ref|XP_012837131.1| PREDICTED: pentatricopeptide repeat-containing protein MRL1,
           chloroplastic [Erythranthe guttatus]
          Length = 1102

 Score =  114 bits (284), Expect = 4e-23
 Identities = 69/153 (45%), Positives = 92/153 (60%), Gaps = 7/153 (4%)
 Frame = +1

Query: 1   EQIRSMTRWIVTDSNNVVLQNKECIDRNQYCIKQTREN------DGSDIKFGETDVIPGG 162
           EQIRSMT WI+T     ++  K+  D ++    +TREN        ++IK GET V PGG
Sbjct: 112 EQIRSMTSWILTSH---IVDKKKSTDGSKNLTTETRENIQADKNSSAEIKIGETAVTPGG 168

Query: 163 ALVVEA-EFQSEILAPTVNGCLTSFTSEALEISTVHSVLSEYGVPPIVDKVCEVQPNAHE 339
           AL+VEA  FQS  +A + +  LT  TSE LEIS+  S+ S  G  P   + CEV  NAH 
Sbjct: 169 ALIVEATRFQSNNVASSGHDSLTFQTSETLEISSAPSLFSNIGAQPFSREACEVHRNAHV 228

Query: 340 FSHSVAYEWSVPVTQTNLGSSTSSEDHMQEETD 438
            ++SV  E S  V Q NLG++ SS +H+QEE+D
Sbjct: 229 HTNSVDSELSTSVMQVNLGAALSSANHVQEESD 261


>ref|XP_011088516.1| PREDICTED: pentatricopeptide repeat-containing protein MRL1,
           chloroplastic [Sesamum indicum]
           gi|747082397|ref|XP_011088517.1| PREDICTED:
           pentatricopeptide repeat-containing protein MRL1,
           chloroplastic [Sesamum indicum]
           gi|747082399|ref|XP_011088518.1| PREDICTED:
           pentatricopeptide repeat-containing protein MRL1,
           chloroplastic [Sesamum indicum]
          Length = 1190

 Score =  107 bits (267), Expect = 3e-21
 Identities = 74/194 (38%), Positives = 102/194 (52%), Gaps = 49/194 (25%)
 Frame = +1

Query: 1   EQIRSMTRWIVTDSNNVVLQNKECIDRNQYCIKQTRENDGSD------IKFGETDVIPGG 162
           + IRSM  WI+TDSN V L+  E +D +   +K+TRE++ +D      IKF ETDVIP G
Sbjct: 115 QHIRSMMSWILTDSNRVDLRKIEAVDGSNDFMKETRESNQADKDMEAEIKFRETDVIPRG 174

Query: 163 ALVVEA-EFQSEILAPTVNGCLTSFTSEALEISTVHSVLSEYGVPPIVDKVCEVQ-PNA- 333
            L+ EA + QS+++A  V+  L S TSE LEIS++ S+ S+Y VP  + +V E + PN+ 
Sbjct: 175 ILIAEASQSQSDMVASCVHDNLASQTSEILEISSMASISSKYNVPSFIKEVSEHENPNSV 234

Query: 334 ----------------------------------------HEFSHSVAYEWSVPVTQTNL 393
                                                   HE  +S   EWSVPV Q NL
Sbjct: 235 DSEWLVPEIQINFGAAPPSENHIQEEMAQLGSLKLDEIREHENPNSADSEWSVPVMQANL 294

Query: 394 GSSTSSEDHMQEET 435
           G+  SS +H+QEET
Sbjct: 295 GAVPSSVNHIQEET 308


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