BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Perilla23_contig00001271
         (1693 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011071167.1| PREDICTED: cleavage and polyadenylation spec...   586   e-176
ref|XP_012845456.1| PREDICTED: cleavage and polyadenylation spec...   534   e-148
emb|CDP13267.1| unnamed protein product [Coffea canephora]            443   e-121
ref|XP_006341786.1| PREDICTED: cleavage and polyadenylation spec...   426   e-116
ref|XP_009780918.1| PREDICTED: cleavage and polyadenylation spec...   425   e-116
ref|XP_009619090.1| PREDICTED: cleavage and polyadenylation spec...   425   e-116
ref|XP_008221952.1| PREDICTED: cleavage and polyadenylation spec...   392   e-106
ref|XP_010320954.1| PREDICTED: LOW QUALITY PROTEIN: cleavage and...   389   e-105
ref|XP_006483997.1| PREDICTED: cleavage and polyadenylation spec...   385   e-104
ref|XP_006438179.1| hypothetical protein CICLE_v10030915mg [Citr...   385   e-104
ref|XP_004310003.1| PREDICTED: cleavage and polyadenylation spec...   384   e-103
ref|XP_008389755.1| PREDICTED: RNA-binding protein FUS-like [Mal...   382   e-103
ref|XP_010251347.1| PREDICTED: RNA-binding motif protein, X chro...   380   e-102
ref|XP_012085551.1| PREDICTED: cleavage and polyadenylation spec...   377   e-101
ref|XP_002282072.3| PREDICTED: cleavage and polyadenylation spec...   375   e-101
ref|XP_006483998.1| PREDICTED: cleavage and polyadenylation spec...   373   e-100
ref|XP_010650880.1| PREDICTED: cleavage and polyadenylation spec...   373   e-100
ref|XP_009359255.1| PREDICTED: cleavage and polyadenylation spec...   373   e-100
ref|XP_007044902.1| RNA-binding family protein isoform 1 [Theobr...   373   e-100
ref|XP_006438180.1| hypothetical protein CICLE_v10030917mg [Citr...   371   e-100

>ref|XP_011071167.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 6
            [Sesamum indicum]
          Length = 643

 Score =  586 bits (1511), Expect(2) = e-176
 Identities = 305/462 (66%), Positives = 335/462 (72%), Gaps = 2/462 (0%)
 Frame = -2

Query: 1524 MDPVTDEQLDYGDEEYAGNQKMQYHQGGAIPALAXXXXXXXXXXXXDLYNDVNVGEGFLQ 1345
            MDPVT EQLDYGDEEYAG+QKMQYHQGGAIPALA            DLYNDVNVGEGFLQ
Sbjct: 1    MDPVTGEQLDYGDEEYAGSQKMQYHQGGAIPALAEEEMIGEEDEYDDLYNDVNVGEGFLQ 60

Query: 1344 MQRSETQVPSGVGNSGFQSSKSNVPGTRVEAVATQEVNNARVSNEVNYAVAAVQFPEQKS 1165
            MQRSE Q+PSGVGN GFQ SKSNVPG R EA+A QEV NARV++E NY    VQFPEQK+
Sbjct: 61   MQRSEAQMPSGVGNGGFQGSKSNVPGIRAEAIAPQEVTNARVTSEGNYLPTGVQFPEQKT 120

Query: 1164 SLPASGGLAQTMDASQRGRLPEMAHNSQAGHLGYQGSANMPHKTAADRMNNSEKVIGEPA 985
            + PA+GG AQT+DASQRGRLPEM HNSQ GHLGYQGS +MP KTAADRMN  EK++GEPA
Sbjct: 121  AFPAAGGPAQTVDASQRGRLPEMVHNSQPGHLGYQGSVSMPQKTAADRMNKPEKIVGEPA 180

Query: 984  PLMYPNMSSTKGVPQVPPNQITPNTNVNVNRSMDEEYMIRPSVENGNTMLFVGELHWWTT 805
            P   PNM S+KG PQ+P   +  + NVN+NR +D+EY+IRP+VENGNTMLFVGELHWWTT
Sbjct: 181  PSPNPNMGSSKGGPQIPTTMMNSSANVNINRPVDDEYLIRPAVENGNTMLFVGELHWWTT 240

Query: 804  DAEIESVLIQYGKVKEIKFYDERASGKSKGYCQVEFYDPAAASACKEGMNGHNFNGRACV 625
            DAE+ESVLIQYGKVKEIKF+DERASGKSKGYCQVEFYDPAAA+ACKEGM+GH FNGRACV
Sbjct: 241  DAELESVLIQYGKVKEIKFFDERASGKSKGYCQVEFYDPAAAAACKEGMHGHLFNGRACV 300

Query: 624  VAFATPQTIKQMGSSYTNKTQGQAPSQPQGRNLMNDSVGRGNGASYPS-XXXXXXXXXXX 448
            VAFATPQTIKQMGSSY NKTQ Q  SQ QGRNL+ND  GRGNG +YPS            
Sbjct: 301  VAFATPQTIKQMGSSYMNKTQTQGQSQQQGRNLINDGAGRGNGTNYPSGDTGRNFGRGGW 360

Query: 447  XXXGNQAPNKGPGSGPMRGRGIIGNKNMI-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 271
               GNQ PNKGPG GP+RGRG +GNKNMI                               
Sbjct: 361  GRGGNQVPNKGPGPGPVRGRGGMGNKNMIGNAPGAGGGAYGQAGLAGPGFGGPPGMMHPQ 420

Query: 270  XXXXXGFDLXXXXXXXXXXXXXXXXXXXGMLPPFPAVNSMGL 145
                 GFDL                   GMLPP+PAVNSMGL
Sbjct: 421  GMMGPGFDL-AFMGRGGGYAGFSGPAFPGMLPPYPAVNSMGL 461



 Score = 62.8 bits (151), Expect(2) = e-176
 Identities = 27/33 (81%), Positives = 28/33 (84%), Gaps = 3/33 (9%)
 Frame = -3

Query: 92  PHSGMWNDTNMGGWGGEEHG---RESSYGGEDN 3
           PHSGMW D N+GGWGGEEHG   RESSYGGEDN
Sbjct: 493 PHSGMWPDMNLGGWGGEEHGRGTRESSYGGEDN 525


>ref|XP_012845456.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 6
            [Erythranthe guttatus] gi|604319404|gb|EYU30596.1|
            hypothetical protein MIMGU_mgv1a002773mg [Erythranthe
            guttata]
          Length = 639

 Score =  534 bits (1375), Expect = e-148
 Identities = 271/392 (69%), Positives = 306/392 (78%), Gaps = 4/392 (1%)
 Frame = -2

Query: 1524 MDPVTDEQLDYGDEEYAGNQKMQYHQGGAIPALAXXXXXXXXXXXXDLYNDVNVGEGFLQ 1345
            MDPVTDEQLDYGDEEY GNQKMQYH GGAIPALA            DLYNDVNVGEGF+Q
Sbjct: 1    MDPVTDEQLDYGDEEYGGNQKMQYHHGGAIPALAEDEMIGDDDEYDDLYNDVNVGEGFMQ 60

Query: 1344 MQRSETQVPSGVGNSGFQSSKSNVPGTRVEAVATQEVNNARVSNEVNYAVAAVQFPEQKS 1165
            MQRSE   PS VGN+ F  SK+  PGTR EA+A+QEVNN RV NE +YA   VQ  +QK+
Sbjct: 61   MQRSEAPPPSAVGNNSFSISKNTAPGTRAEAIASQEVNNGRVGNEGSYAPNGVQLSDQKN 120

Query: 1164 SLPASGGLAQTMDASQRGRLPEMAHNSQAGHLGYQGSANMPHKTAADRMNNSEKVIGEPA 985
            +L A GG AQ +DASQR RLPE+A++SQA HLGYQGS  M HKTA DRMNNSE ++GEPA
Sbjct: 121  NLTAVGGPAQPVDASQRVRLPEVANSSQAAHLGYQGSEIMLHKTATDRMNNSENIVGEPA 180

Query: 984  PLMYPNMSSTKGVPQVPPNQI--TPNTNVNVNRSMDEEYMIRPS-VENGNTMLFVGELHW 814
             L+YPN  S+KGVPQ P N +    N NVNVNRSMD+EY+IRPS  ENGN M++VGELHW
Sbjct: 181  SLVYPNTGSSKGVPQAPSNLMNSNANVNVNVNRSMDDEYLIRPSGGENGNPMIYVGELHW 240

Query: 813  WTTDAEIESVLIQYGKVKEIKFYDERASGKSKGYCQVEFYDPAAASACKEGMNGHNFNGR 634
            WTTDAE+ESVLIQYG+VKEIKF+DERASGKSKGYCQVEFYDPAAA+ACK+GM GH FNGR
Sbjct: 241  WTTDAEVESVLIQYGRVKEIKFFDERASGKSKGYCQVEFYDPAAATACKDGMQGHIFNGR 300

Query: 633  ACVVAFATPQTIKQMGSSYTNKTQGQAPSQPQGRNLMNDSVGRGNGASYPS-XXXXXXXX 457
            ACVV +A PQT KQMG+SY NK QGQ+ SQ QGRN MND  GRGNG +YPS         
Sbjct: 301  ACVVTYANPQTSKQMGASY-NKNQGQSQSQLQGRNPMNDGAGRGNGTNYPSGDAGRNFGR 359

Query: 456  XXXXXXGNQAPNKGPGSGPMRGRGIIGNKNMI 361
                  GNQAPN+GPG+GP+RGRG +GNKNMI
Sbjct: 360  GGGWGRGNQAPNRGPGAGPIRGRGGMGNKNMI 391



 Score = 72.4 bits (176), Expect = 1e-09
 Identities = 29/30 (96%), Positives = 29/30 (96%)
 Frame = -3

Query: 92  PHSGMWNDTNMGGWGGEEHGRESSYGGEDN 3
           PHSGMWND NMGGWGGEEHGRESSYGGEDN
Sbjct: 495 PHSGMWNDPNMGGWGGEEHGRESSYGGEDN 524


>emb|CDP13267.1| unnamed protein product [Coffea canephora]
          Length = 655

 Score =  443 bits (1140), Expect = e-121
 Identities = 237/398 (59%), Positives = 275/398 (69%), Gaps = 10/398 (2%)
 Frame = -2

Query: 1524 MDPVTDEQLDYGDEEYAGNQKMQYHQGGAIPALAXXXXXXXXXXXXDLYNDVNVGEGFLQ 1345
            MDP  DEQLD+GDEEY G+QKMQYH+GGAIPALA            DLYNDVNVGEGFLQ
Sbjct: 1    MDPGGDEQLDFGDEEYGGSQKMQYHRGGAIPALAEDEMINEDDEYDDLYNDVNVGEGFLQ 60

Query: 1344 MQ---RSET-QVPSGVGNSGFQSSKSNVPGTRVEAVATQEVNNARVSNEVNYAVAAVQFP 1177
            MQ   RSET + P GVGN GF + +++V   R E V TQ VN  R + E  Y  + V+FP
Sbjct: 61   MQQQQRSETPRAPLGVGNGGFPAPRASVQDPRAETVVTQGVNIPRSATEGKYTNSGVRFP 120

Query: 1176 EQKSSLPASGGLAQTMDASQRGRLPEMAHNSQAGHLGYQGS--ANMPHKTAADRMNNSEK 1003
            +QKS L +  G     DASQ+GR PE+ HNSQAG+LGYQGS    M  K   + ++ S K
Sbjct: 121  DQKSGLASDVGALPGTDASQKGRAPEIIHNSQAGNLGYQGSMAVAMSQKVGVESLDMSGK 180

Query: 1002 VIGEPAPLMYPNMSSTKGVPQVPPNQITPNTNVNVNRSMDEEYMIRPSVENGNTMLFVGE 823
            V GEP PL+ P   + + +PQVP N ++ ++NVN  R +  E  +RP+VENGNTMLFVGE
Sbjct: 181  VTGEPGPLLNPVAGAPRVIPQVPANHMSSSSNVNSIRPVVTENQVRPAVENGNTMLFVGE 240

Query: 822  LHWWTTDAEIESVLIQYGKVKEIKFYDERASGKSKGYCQVEFYDPAAASACKEGMNGHNF 643
            LHWWTTD E+ESVL QYGKVKEIKF+DERASGKSKGYCQVEF DPAAA+ACKEGMNGH F
Sbjct: 241  LHWWTTDTELESVLTQYGKVKEIKFFDERASGKSKGYCQVEFSDPAAAAACKEGMNGHVF 300

Query: 642  NGRACVVAFATPQTIKQMGSSYTNKT--QGQAPSQPQGRNLMNDSVGRGNGASYPS--XX 475
            NGRACVVA ATPQTIKQM +SY NKT  Q Q+ SQPQGR  MND  GRGNG +YPS    
Sbjct: 301  NGRACVVALATPQTIKQMAASYMNKTQVQSQSQSQPQGRRPMNDGAGRGNGTNYPSGDAG 360

Query: 474  XXXXXXXXXXXXGNQAPNKGPGSGPMRGRGIIGNKNMI 361
                        G   PNK P   P RGRG +G KNM+
Sbjct: 361  RNFGRGGWAGRGGQGMPNKAPVGVPGRGRGTVGAKNMM 398



 Score = 57.0 bits (136), Expect(2) = 1e-07
 Identities = 26/33 (78%), Positives = 28/33 (84%), Gaps = 3/33 (9%)
 Frame = -3

Query: 92  PHSGMWNDTNMGGWGGEEHG---RESSYGGEDN 3
           PH+GMW DT+M GWGGEEHG   RESSYGGEDN
Sbjct: 506 PHAGMWTDTSM-GWGGEEHGRRTRESSYGGEDN 537



 Score = 28.5 bits (62), Expect(2) = 1e-07
 Identities = 11/13 (84%), Positives = 12/13 (92%)
 Frame = -2

Query: 183 MLPPFPAVNSMGL 145
           M+PPFPAVN MGL
Sbjct: 462 MIPPFPAVNHMGL 474


>ref|XP_006341786.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            CG7185-like isoform X1 [Solanum tuberosum]
            gi|565349616|ref|XP_006341787.1| PREDICTED: cleavage and
            polyadenylation specificity factor subunit CG7185-like
            isoform X2 [Solanum tuberosum]
          Length = 648

 Score =  426 bits (1096), Expect = e-116
 Identities = 222/391 (56%), Positives = 258/391 (65%), Gaps = 3/391 (0%)
 Frame = -2

Query: 1524 MDPVTDEQLDYGDEEYAGNQKMQYHQGGAIPALAXXXXXXXXXXXXDLYNDVNVGEGFLQ 1345
            MDP  DEQLDYGDEEY G+ KMQYH  G IPALA            DLYNDVN+GEGFLQ
Sbjct: 1    MDPTADEQLDYGDEEYGGSHKMQYHGSGTIPALAEDEMMGEDDEYDDLYNDVNIGEGFLQ 60

Query: 1344 MQRSETQVPS-GVGNSGFQSSKSNVPGTRVEAVATQEVNNARVSNEVNYAVAAVQFPEQK 1168
            +QRSE  VPS   GN  FQ+ K + P +R   + ++E     ++ E  YA   VQFP+QK
Sbjct: 61   LQRSEVPVPSVDAGNGNFQAQKDSFPASRAGGLGSEEAKIPGIATEGKYAGTEVQFPQQK 120

Query: 1167 SSLPASGGLAQTMDASQRGRLPE--MAHNSQAGHLGYQGSANMPHKTAADRMNNSEKVIG 994
                      +  DA+Q+ R     M  NSQAG+ GYQGS  MP K  AD M   EK   
Sbjct: 121  GEPVVERETERPADAAQKARPSAITMTLNSQAGNSGYQGSMPMPQKIGADPMAMPEKNAS 180

Query: 993  EPAPLMYPNMSSTKGVPQVPPNQITPNTNVNVNRSMDEEYMIRPSVENGNTMLFVGELHW 814
            E  PLM   +   + VP +P NQ+  + NVN+N  +  E   RPS+ENGNTMLFVGELHW
Sbjct: 181  EATPLMNSVVPGPRVVPHMPTNQLNSSGNVNMNNPVISETPFRPSLENGNTMLFVGELHW 240

Query: 813  WTTDAEIESVLIQYGKVKEIKFYDERASGKSKGYCQVEFYDPAAASACKEGMNGHNFNGR 634
            WTTDAE+ESVL QYG VKEIKF+DERASGKSKGYCQVEF+DPA+A+ACKEGMNG+NFNGR
Sbjct: 241  WTTDAELESVLTQYGNVKEIKFFDERASGKSKGYCQVEFFDPASAAACKEGMNGYNFNGR 300

Query: 633  ACVVAFATPQTIKQMGSSYTNKTQGQAPSQPQGRNLMNDSVGRGNGASYPSXXXXXXXXX 454
            ACVVAFATPQTIKQMGSSY NKTQ Q  SQPQGR  MN+ VGRG     P          
Sbjct: 301  ACVVAFATPQTIKQMGSSYANKTQNQVQSQPQGRRPMNEGVGRGGPNYTPGDAGRNFGRG 360

Query: 453  XXXXXGNQAPNKGPGSGPMRGRGIIGNKNMI 361
                 G   PN+GPG GP+RGRG +G+KNM+
Sbjct: 361  SWGRGGPGMPNRGPGGGPVRGRGAMGSKNMM 391



 Score = 60.1 bits (144), Expect(2) = 1e-07
 Identities = 26/33 (78%), Positives = 27/33 (81%), Gaps = 3/33 (9%)
 Frame = -3

Query: 92  PHSGMWNDTNMGGWGGEEHG---RESSYGGEDN 3
           PH GMW DT+ GGWGGEEHG   RESSYGGEDN
Sbjct: 497 PHPGMWTDTSGGGWGGEEHGRRTRESSYGGEDN 529



 Score = 25.4 bits (54), Expect(2) = 1e-07
 Identities = 10/13 (76%), Positives = 11/13 (84%)
 Frame = -2

Query: 183 MLPPFPAVNSMGL 145
           M+PPF AVN MGL
Sbjct: 453 MMPPFQAVNPMGL 465


>ref|XP_009780918.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 6
            [Nicotiana sylvestris]
          Length = 648

 Score =  425 bits (1093), Expect = e-116
 Identities = 222/391 (56%), Positives = 259/391 (66%), Gaps = 3/391 (0%)
 Frame = -2

Query: 1524 MDPVTDEQLDYGDEEYAGNQKMQYHQGGAIPALAXXXXXXXXXXXXDLYNDVNVGEGFLQ 1345
            MDP  DEQLDYGDEEY G+ KMQYH GG IPALA            DLYNDVNVGEGFLQ
Sbjct: 1    MDPTADEQLDYGDEEYGGSHKMQYHGGGTIPALAEDEMMGEDDEYDDLYNDVNVGEGFLQ 60

Query: 1344 MQRSETQVPS-GVGNSGFQSSKSNVPGTRVEAVATQEVNNARVSNEVNYAVAAVQFPEQK 1168
            +QRSE  VP    GN  FQ  K++ P  + + + + E     V+ E  YA   V+FPEQK
Sbjct: 61   LQRSEAPVPPVDAGNVSFQDQKASFPDAKADGIGSDEAKIPGVATEGKYAGTEVRFPEQK 120

Query: 1167 SSLPASGGLAQTMDASQRGRLPEM--AHNSQAGHLGYQGSANMPHKTAADRMNNSEKVIG 994
            S      G  +  DA+Q+GR   M    +SQ G+ GYQGS     K  AD +N  EK   
Sbjct: 121  SGPVVERGTERPADAAQKGRPLAMMLTRDSQVGNSGYQGSIQTTQKIGADPINMPEKNAN 180

Query: 993  EPAPLMYPNMSSTKGVPQVPPNQITPNTNVNVNRSMDEEYMIRPSVENGNTMLFVGELHW 814
            E  PL+   +  ++ V Q+P NQ++ + NVN+N  +  E  IRPS+ENGNTMLFVGELHW
Sbjct: 181  EATPLVNSGVGGSRVVTQMPTNQLSSSGNVNINSPIISETPIRPSLENGNTMLFVGELHW 240

Query: 813  WTTDAEIESVLIQYGKVKEIKFYDERASGKSKGYCQVEFYDPAAASACKEGMNGHNFNGR 634
            WTTDAEIESVL QYG VKEIKF+DERASGKSKGYCQVEF+DPAAA++CKEGMNGH FNGR
Sbjct: 241  WTTDAEIESVLTQYGNVKEIKFFDERASGKSKGYCQVEFFDPAAAASCKEGMNGHIFNGR 300

Query: 633  ACVVAFATPQTIKQMGSSYTNKTQGQAPSQPQGRNLMNDSVGRGNGASYPSXXXXXXXXX 454
            ACVVAFATPQTIKQMGSSY NKTQ Q  +QPQGR  MN+ VGRG     P          
Sbjct: 301  ACVVAFATPQTIKQMGSSYMNKTQNQVQTQPQGRRPMNEGVGRGGANYAPGDAGRNFGRG 360

Query: 453  XXXXXGNQAPNKGPGSGPMRGRGIIGNKNMI 361
                 G   PN+GPG GP+RGRG +G KNM+
Sbjct: 361  SWGRGGPGMPNRGPGGGPVRGRGGMGAKNMM 391



 Score = 60.1 bits (144), Expect(2) = 1e-07
 Identities = 26/33 (78%), Positives = 27/33 (81%), Gaps = 3/33 (9%)
 Frame = -3

Query: 92  PHSGMWNDTNMGGWGGEEHG---RESSYGGEDN 3
           PH GMW DT+ GGWGGEEHG   RESSYGGEDN
Sbjct: 497 PHPGMWTDTSGGGWGGEEHGRRTRESSYGGEDN 529



 Score = 25.4 bits (54), Expect(2) = 1e-07
 Identities = 10/13 (76%), Positives = 11/13 (84%)
 Frame = -2

Query: 183 MLPPFPAVNSMGL 145
           M+P FPAVN MGL
Sbjct: 453 MIPQFPAVNPMGL 465


>ref|XP_009619090.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 6
            [Nicotiana tomentosiformis]
          Length = 648

 Score =  425 bits (1093), Expect = e-116
 Identities = 222/391 (56%), Positives = 261/391 (66%), Gaps = 3/391 (0%)
 Frame = -2

Query: 1524 MDPVTDEQLDYGDEEYAGNQKMQYHQGGAIPALAXXXXXXXXXXXXDLYNDVNVGEGFLQ 1345
            MDP  DEQLDYGDEEY G+ KMQYH GG IPALA            DLYNDVNVGEGFLQ
Sbjct: 1    MDPTADEQLDYGDEEYGGSHKMQYHGGGTIPALAEDEMMGEDDEYDDLYNDVNVGEGFLQ 60

Query: 1344 MQRSETQVPS-GVGNSGFQSSKSNVPGTRVEAVATQEVNNARVSNEVNYAVAAVQFPEQK 1168
            +QRSE  VP    GN  F+  K++ P  + + + + E     V+ E  YA   V+FPEQK
Sbjct: 61   LQRSEAPVPPVDAGNGSFRDQKASFPDAKADGIGSDEAKIPGVATEGKYAGTEVRFPEQK 120

Query: 1167 SSLPASGGLAQTMDASQRGRLPEM--AHNSQAGHLGYQGSANMPHKTAADRMNNSEKVIG 994
            S   A  G  +  DA+Q+GR   M    +SQ G+ GYQGS     K  AD +N  EK   
Sbjct: 121  SGPVAERGTERPADAAQKGRPLAMMLTGDSQMGNSGYQGSIPTTQKIGADPINMPEKNAN 180

Query: 993  EPAPLMYPNMSSTKGVPQVPPNQITPNTNVNVNRSMDEEYMIRPSVENGNTMLFVGELHW 814
            E  PL+   +  ++ VPQ+P NQ++ + NVN+N  +  E  IRPS+ENGNTMLFVGELHW
Sbjct: 181  EATPLVNSGVGGSRVVPQMPTNQLSSSGNVNMNSPIISETPIRPSLENGNTMLFVGELHW 240

Query: 813  WTTDAEIESVLIQYGKVKEIKFYDERASGKSKGYCQVEFYDPAAASACKEGMNGHNFNGR 634
            WTTD+EIESVL QYG VKEIKF+DERASGKSKGYCQVEF+DPAAA++CKEGMNGH FNGR
Sbjct: 241  WTTDSEIESVLTQYGNVKEIKFFDERASGKSKGYCQVEFFDPAAAASCKEGMNGHIFNGR 300

Query: 633  ACVVAFATPQTIKQMGSSYTNKTQGQAPSQPQGRNLMNDSVGRGNGASYPSXXXXXXXXX 454
            ACVVAFATPQTIKQMGSSY NKTQ Q  +QPQGR  MN+ VGRG     P          
Sbjct: 301  ACVVAFATPQTIKQMGSSYMNKTQNQVQTQPQGRRPMNEGVGRGGANYTPGDAGRNFGRG 360

Query: 453  XXXXXGNQAPNKGPGSGPMRGRGIIGNKNMI 361
                 G   PN+GPG GP+RGRG +G KNM+
Sbjct: 361  SWGRGGPGMPNRGPGGGPVRGRGGMGAKNMM 391



 Score = 60.1 bits (144), Expect(2) = 1e-07
 Identities = 26/33 (78%), Positives = 27/33 (81%), Gaps = 3/33 (9%)
 Frame = -3

Query: 92  PHSGMWNDTNMGGWGGEEHG---RESSYGGEDN 3
           PH GMW DT+ GGWGGEEHG   RESSYGGEDN
Sbjct: 497 PHPGMWTDTSGGGWGGEEHGRRTRESSYGGEDN 529



 Score = 25.4 bits (54), Expect(2) = 1e-07
 Identities = 10/13 (76%), Positives = 11/13 (84%)
 Frame = -2

Query: 183 MLPPFPAVNSMGL 145
           M+P FPAVN MGL
Sbjct: 453 MIPQFPAVNPMGL 465


>ref|XP_008221952.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            CG7185 [Prunus mume]
          Length = 647

 Score =  392 bits (1008), Expect = e-106
 Identities = 215/399 (53%), Positives = 259/399 (64%), Gaps = 12/399 (3%)
 Frame = -2

Query: 1524 MDPVTDEQLDYGDEEYAGNQKMQYHQGGAIPALAXXXXXXXXXXXXDLYNDVNVGEGFLQ 1345
            MDP+ +EQ+DY DEEY G QK+QY   GAI ALA            DLYNDVNVGEGFLQ
Sbjct: 1    MDPMAEEQIDYEDEEYGGAQKLQYQGSGAISALADEEPMVEDDEYDDLYNDVNVGEGFLQ 60

Query: 1344 MQRSETQVP-SGVGNSGFQSSKSNVPGTRVEAVATQEVNNARVSNEVNYAVAAVQFPEQK 1168
            M RSE  +P  GVGN G Q+ K++V  TRV+A  +QE     VS +  Y+ A  QFPEQ+
Sbjct: 61   MHRSEAPLPPGGVGNGGLQAQKTDVTETRVQAGVSQESKIPGVSVQGKYSSAVAQFPEQQ 120

Query: 1167 SSLPA-------SGGLAQTMDASQRGRLPEMAHNSQAGHLGYQGSANMPHKTAADRMNNS 1009
               P        S G       SQ+GR  EM+H++Q  H+G+QGS  MP     D  + +
Sbjct: 121  DQPPVAKEPELGSTGYVGGASGSQKGRAMEMSHDTQVRHMGFQGSTTMPPNIGGDSSDIT 180

Query: 1008 EKVIGEPAPLMYPNMSSTKGVPQVPPNQITPNTNVNVNRSMDEEYMIRPSVENGNTMLFV 829
             K   E  P M    +   GV Q+P NQI+    VN NR M  E  +RP+VENG+TMLFV
Sbjct: 181  GKTALESVPSMNSGTAGPTGVTQMPTNQIS--IKVNANRPMFNENQVRPTVENGSTMLFV 238

Query: 828  GELHWWTTDAEIESVLIQYGKVKEIKFYDERASGKSKGYCQVEFYDPAAASACKEGMNGH 649
            GELHWWTTD+E+ESVL QYG+VKEIKF+DERASGKSKGYCQVEF+DPAAA+ACKEGM+G+
Sbjct: 239  GELHWWTTDSELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFHDPAAATACKEGMDGY 298

Query: 648  NFNGRACVVAFATPQTIKQMGSSYTNKTQGQAPSQPQGRNLMNDSVGRGNGASYPS--XX 475
             FNGRACVVAFA+PQT+KQMG+SY +K+QGQ  SQ  GR  MND VGRG G +Y +    
Sbjct: 299  LFNGRACVVAFASPQTLKQMGASYLSKSQGQTQSQQPGRRPMNDGVGRGGGVNYQTGDTG 358

Query: 474  XXXXXXXXXXXXGNQAPNKGP-GSGPMRGR-GIIGNKNM 364
                        G    N+GP G GPMRGR G +G KNM
Sbjct: 359  GRNFGRGGWGRGGQGVANRGPGGGGPMRGRGGAMGAKNM 397



 Score = 55.5 bits (132), Expect(3) = 2e-06
 Identities = 23/31 (74%), Positives = 26/31 (83%), Gaps = 3/31 (9%)
 Frame = -3

Query: 89  HSGMWNDTNMGGWGGEEHG---RESSYGGED 6
           H+GMWND +MGGW GEEHG   RESSYGG+D
Sbjct: 506 HAGMWNDPSMGGWAGEEHGRRTRESSYGGDD 536



 Score = 23.9 bits (50), Expect(3) = 2e-06
 Identities = 10/13 (76%), Positives = 11/13 (84%)
 Frame = -2

Query: 183 MLPPFPAVNSMGL 145
           ML  FPAVN+MGL
Sbjct: 461 MLSSFPAVNTMGL 473



 Score = 21.2 bits (43), Expect(3) = 2e-06
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = -2

Query: 165 AVNSMGLXNESQWDGH 118
           A N MG+   S  DGH
Sbjct: 490 ATNGMGMMGSSGMDGH 505


>ref|XP_010320954.1| PREDICTED: LOW QUALITY PROTEIN: cleavage and polyadenylation
            specificity factor subunit 6 [Solanum lycopersicum]
          Length = 648

 Score =  389 bits (1000), Expect = e-105
 Identities = 201/391 (51%), Positives = 244/391 (62%), Gaps = 3/391 (0%)
 Frame = -2

Query: 1524 MDPVTDEQLDYGDEEYAGNQKMQYHQGGAIPALAXXXXXXXXXXXXDLYNDVNVGEGFLQ 1345
            MDP  DEQLDYGDEEY G+ KMQYH  G I ALA             LYNDVN+GEGFL 
Sbjct: 1    MDPTADEQLDYGDEEYRGSHKMQYHVSGTIHALAEDEMLGEDDEYDYLYNDVNIGEGFLX 60

Query: 1344 MQRSETQVPS-GVGNSGFQSSKSNVPGTRVEAVATQEVNNARVSNEVNYAVAAVQFPEQK 1168
            +QRS+  VPS   GN  FQ  K + P +R   + ++E     ++ + NYA   VQFP+Q 
Sbjct: 61   LQRSKVPVPSVDAGNGSFQVQKDSFPASRXGGLGSEEAKIPGIATKENYAGTEVQFPQQN 120

Query: 1167 SSLPASGGLAQTMDASQRGRLPEMAHN--SQAGHLGYQGSANMPHKTAADRMNNSEKVIG 994
                      +  DA+Q+ R   +  N  SQ G+ GYQGS  MP K  AD M   E  + 
Sbjct: 121  GGSLVERETERPADAAQKSRPSALTMNLNSQVGNSGYQGSMPMPQKIGADPMAMPEINVS 180

Query: 993  EPAPLMYPNMSSTKGVPQVPPNQITPNTNVNVNRSMDEEYMIRPSVENGNTMLFVGELHW 814
            E  PL+   ++  + V  +P NQ+  + NVN+N  +  +   RPS+EN NTMLFVGELHW
Sbjct: 181  EATPLVNSVVAGPRVVQHMPTNQLNSSGNVNINNPIISDSXFRPSLENANTMLFVGELHW 240

Query: 813  WTTDAEIESVLIQYGKVKEIKFYDERASGKSKGYCQVEFYDPAAASACKEGMNGHNFNGR 634
            WTTDAE+ESVL QYG VKEIKF+DERASGKSKGYCQVEF+DP + + CKEG+NG+NFNGR
Sbjct: 241  WTTDAELESVLTQYGNVKEIKFFDERASGKSKGYCQVEFFDPGSTATCKEGINGYNFNGR 300

Query: 633  ACVVAFATPQTIKQMGSSYTNKTQGQAPSQPQGRNLMNDSVGRGNGASYPSXXXXXXXXX 454
             CVVAFAT QTIKQM SSY NKTQ Q  SQPQGR  MN+ VGRG                
Sbjct: 301  PCVVAFATAQTIKQMDSSYANKTQNQVQSQPQGRGPMNEGVGRGGPNYTLGDAGRNLGRG 360

Query: 453  XXXXXGNQAPNKGPGSGPMRGRGIIGNKNMI 361
                     PN+GPG GP+RGRG +G+KNM+
Sbjct: 361  SWGRRETGMPNRGPGGGPVRGRGAMGSKNMM 391



 Score = 60.1 bits (144), Expect(2) = 6e-07
 Identities = 26/33 (78%), Positives = 27/33 (81%), Gaps = 3/33 (9%)
 Frame = -3

Query: 92  PHSGMWNDTNMGGWGGEEHG---RESSYGGEDN 3
           PH GMW DT+ GGWGGEEHG   RESSYGGEDN
Sbjct: 497 PHPGMWTDTSGGGWGGEEHGRRTRESSYGGEDN 529



 Score = 23.1 bits (48), Expect(2) = 6e-07
 Identities = 9/12 (75%), Positives = 10/12 (83%)
 Frame = -2

Query: 183 MLPPFPAVNSMG 148
           M+PPF AVN MG
Sbjct: 453 MMPPFLAVNPMG 464


>ref|XP_006483997.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            CG7185-like isoform X1 [Citrus sinensis]
          Length = 658

 Score =  385 bits (989), Expect = e-104
 Identities = 209/397 (52%), Positives = 252/397 (63%), Gaps = 9/397 (2%)
 Frame = -2

Query: 1524 MDPVTDEQLDYGDEEYAGNQKMQYHQGGAIPALAXXXXXXXXXXXXDLYNDVNVGEGFLQ 1345
            MD + +EQ+DY +EEY G QKMQY  GGAIPALA            DLYNDVNVG+G LQ
Sbjct: 1    MDSMAEEQIDYEEEEYGGAQKMQYQGGGAIPALADEELMGEDDEYDDLYNDVNVGDGLLQ 60

Query: 1344 MQRSETQVPS-GVGNSGFQSSKSNVPGTRVEAVATQEVNNARVSNEVNYAVAAVQFPEQK 1168
             Q+ E   PS GVGN   Q  K++VP  +V+A  +Q  N   VS E  Y  A   FP Q 
Sbjct: 61   FQQPEAPPPSAGVGNGRLQVKKTDVPEQQVQAGVSQGSNVPGVSVEGKYTNAGTHFPAQN 120

Query: 1167 SSLPA-------SGGLAQTMDASQRGRLPEMAHNSQAGHLGYQGSANMPHKTAADRMNNS 1009
                A       SG        SQ+G + E  H++   ++G+QGS + P +T  D  N  
Sbjct: 121  DVQVAVNRPNMGSGNYPDGASVSQKGSVQETTHDAHVRNMGFQGSTSGPSRTGVDPSNMP 180

Query: 1008 EKVIGEPAPLMYPNMSSTKGVPQVPPNQITPNTNVNVNRSMDEEYMIRPSVENGNTMLFV 829
             +V  EPAP++ P  +  +G   +P NQ+    N+NVNR+M  E  IRP +ENG TMLFV
Sbjct: 181  GRVANEPAPVLNPGAAGPQGA-LIPANQM--GVNINVNRAMVNENQIRPPLENGGTMLFV 237

Query: 828  GELHWWTTDAEIESVLIQYGKVKEIKFYDERASGKSKGYCQVEFYDPAAASACKEGMNGH 649
            GELHWWTTDAE+ESVL QYG+VKEIKF+DERASGKSKGYCQVEF+D AAA+ACK+GMNGH
Sbjct: 238  GELHWWTTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFFDAAAAAACKDGMNGH 297

Query: 648  NFNGRACVVAFATPQTIKQMGSSYTNKTQGQAPSQPQGRNLMNDSVGRGNGASYPSXXXX 469
             FNGR CVVAFA+PQT+KQMG+SY NK QGQ  SQ QGR  MND  GRG   +Y S    
Sbjct: 298  VFNGRPCVVAFASPQTLKQMGASYMNKNQGQPQSQTQGRRPMNDGGGRGGNMNYQSGDGG 357

Query: 468  XXXXXXXXXXGNQ-APNKGPGSGPMRGRGIIGNKNMI 361
                      G Q  PN+GPG G MRGRG +G +NMI
Sbjct: 358  RNFGRGGWGRGGQGVPNRGPGGGAMRGRGPMGARNMI 394



 Score = 54.3 bits (129), Expect(2) = 2e-06
 Identities = 23/32 (71%), Positives = 26/32 (81%), Gaps = 3/32 (9%)
 Frame = -3

Query: 92  PHSGMWNDTNMGGWGGEEHG---RESSYGGED 6
           PH GMW D++MGGW GEEHG   RESSYGG+D
Sbjct: 504 PHPGMWTDSSMGGWLGEEHGRRTRESSYGGDD 535



 Score = 26.9 bits (58), Expect(2) = 2e-06
 Identities = 11/13 (84%), Positives = 12/13 (92%)
 Frame = -2

Query: 183 MLPPFPAVNSMGL 145
           MLP FPAVN+MGL
Sbjct: 460 MLPSFPAVNAMGL 472


>ref|XP_006438179.1| hypothetical protein CICLE_v10030915mg [Citrus clementina]
            gi|557540375|gb|ESR51419.1| hypothetical protein
            CICLE_v10030915mg [Citrus clementina]
          Length = 658

 Score =  385 bits (988), Expect = e-104
 Identities = 209/397 (52%), Positives = 252/397 (63%), Gaps = 9/397 (2%)
 Frame = -2

Query: 1524 MDPVTDEQLDYGDEEYAGNQKMQYHQGGAIPALAXXXXXXXXXXXXDLYNDVNVGEGFLQ 1345
            MD + +EQ+DY +EEY G QKMQY  GGAIPALA            DLYNDVNVG+G LQ
Sbjct: 1    MDSMAEEQIDYEEEEYGGAQKMQYQGGGAIPALADEELMGEDDEYDDLYNDVNVGDGLLQ 60

Query: 1344 MQRSETQVPS-GVGNSGFQSSKSNVPGTRVEAVATQEVNNARVSNEVNYAVAAVQFPEQK 1168
             Q+ E   PS GVGN   Q  K++VP  +V+A  +Q  N   VS E  Y  A   FP Q 
Sbjct: 61   FQQPEAPPPSAGVGNGRLQVKKTDVPEQQVQAGVSQGSNVPGVSVEGKYTNAGTHFPAQN 120

Query: 1167 SSLPA-------SGGLAQTMDASQRGRLPEMAHNSQAGHLGYQGSANMPHKTAADRMNNS 1009
                A       SG        SQ+G + E  H++   ++G+QGS + P +T  D  N  
Sbjct: 121  DVQVAVNRPNMGSGNYPDGASVSQKGSVQETTHDAHVRNMGFQGSTSGPPRTGVDPSNMP 180

Query: 1008 EKVIGEPAPLMYPNMSSTKGVPQVPPNQITPNTNVNVNRSMDEEYMIRPSVENGNTMLFV 829
             +V  EPAP++ P  +  +G   +P NQ+    N+NVNR+M  E  IRP +ENG TMLFV
Sbjct: 181  GRVANEPAPVLNPGAAGPQGA-LIPANQM--GVNINVNRAMVNENQIRPPLENGGTMLFV 237

Query: 828  GELHWWTTDAEIESVLIQYGKVKEIKFYDERASGKSKGYCQVEFYDPAAASACKEGMNGH 649
            GELHWWTTDAE+ESVL QYG+VKEIKF+DERASGKSKGYCQVEF+D AAA+ACK+GMNGH
Sbjct: 238  GELHWWTTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFFDAAAAAACKDGMNGH 297

Query: 648  NFNGRACVVAFATPQTIKQMGSSYTNKTQGQAPSQPQGRNLMNDSVGRGNGASYPSXXXX 469
             FNGR CVVAFA+PQT+KQMG+SY NK QGQ  SQ QGR  MND  GRG   +Y S    
Sbjct: 298  VFNGRPCVVAFASPQTLKQMGASYMNKNQGQPQSQTQGRRPMNDGGGRGGNMNYQSGDGG 357

Query: 468  XXXXXXXXXXGNQ-APNKGPGSGPMRGRGIIGNKNMI 361
                      G Q  PN+GPG G MRGRG +G KNM+
Sbjct: 358  RNFGRGGWGRGGQGVPNRGPGGGAMRGRGPMGAKNMM 394



 Score = 54.7 bits (130), Expect(2) = 2e-06
 Identities = 23/32 (71%), Positives = 26/32 (81%), Gaps = 3/32 (9%)
 Frame = -3

Query: 92  PHSGMWNDTNMGGWGGEEHG---RESSYGGED 6
           PH GMW D++MGGW GEEHG   RESSYGG+D
Sbjct: 504 PHPGMWTDSSMGGWVGEEHGRRTRESSYGGDD 535



 Score = 26.9 bits (58), Expect(2) = 2e-06
 Identities = 11/13 (84%), Positives = 12/13 (92%)
 Frame = -2

Query: 183 MLPPFPAVNSMGL 145
           MLP FPAVN+MGL
Sbjct: 460 MLPSFPAVNAMGL 472


>ref|XP_004310003.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            CG7185 [Fragaria vesca subsp. vesca]
          Length = 646

 Score =  384 bits (987), Expect = e-103
 Identities = 208/392 (53%), Positives = 256/392 (65%), Gaps = 4/392 (1%)
 Frame = -2

Query: 1524 MDPVTDEQLDYGDEEYAGNQKMQYHQGGAIPALAXXXXXXXXXXXXDLYNDVNVGEGFLQ 1345
            MDP+ +EQ+DY +EEY G QK+QY + GAIPALA            DLYNDVNVGEGFLQ
Sbjct: 1    MDPMGEEQIDYEEEEYGGAQKLQYQESGAIPALADEEPMVEDDEYDDLYNDVNVGEGFLQ 60

Query: 1344 MQRSETQVP-SGVGNSGFQSSKSNVPGTRVEAVATQEVNNARVSNEVNYAVAAVQFPEQK 1168
            M R E  +P +GVGN G Q+ K+NVP  RV+  A+QEV N   S E  Y+      PEQK
Sbjct: 61   MHRPEPPLPPAGVGNGGLQAQKNNVPEQRVQGGASQEVKNPGFSVEGKYS----SVPEQK 116

Query: 1167 SSLPASGGLAQTMDASQRGRLPEMAHNSQAGHLGYQGSANMPHKTAADRMNNSEKVIGEP 988
               P S  +   M ASQ+GR+ EM H++Q  ++G+QG+A M     AD  + + K+   P
Sbjct: 117  DQPPVS--VVPEM-ASQKGRVMEMTHDAQVRNMGFQGAATMQSNVVADSSDLTGKIANGP 173

Query: 987  APLMYPNMSSTKGVPQVPPNQITPNTNVNVNRSMDEEYMIRPSVENGNTMLFVGELHWWT 808
             P M    +    V Q+P NQ+  N  +NVNR M  E  IRP VENG+  LFVGELHWWT
Sbjct: 174  IPSMNSGSNGPPAVQQMPANQM--NMKINVNRPMVNENQIRPPVENGSATLFVGELHWWT 231

Query: 807  TDAEIESVLIQYGKVKEIKFYDERASGKSKGYCQVEFYDPAAASACKEGMNGHNFNGRAC 628
            TDAE+E VL Q+G++KEIKF+DERASGKSKGYCQV+FYDPAAASACKEGM+G+ FNGRAC
Sbjct: 232  TDAELEGVLSQFGRIKEIKFFDERASGKSKGYCQVDFYDPAAASACKEGMDGYVFNGRAC 291

Query: 627  VVAFATPQTIKQMGSSYTNKTQGQAPSQPQGRNLMNDSVGRGNGASYP--SXXXXXXXXX 454
            VVAFA+ QT+KQMG SY NK+QGQ  +QPQGR  MND  GRG   ++             
Sbjct: 292  VVAFASSQTLKQMGDSYVNKSQGQVQTQPQGRRPMNDGAGRGGNMNFQGGDTGRNFGRGN 351

Query: 453  XXXXXGNQAPNKGP-GSGPMRGRGIIGNKNMI 361
                 G    N+GP G GP RGRG +G +NM+
Sbjct: 352  NWGRGGQGVLNRGPGGGGPGRGRGAMGARNMV 383


>ref|XP_008389755.1| PREDICTED: RNA-binding protein FUS-like [Malus domestica]
            gi|657994880|ref|XP_008389756.1| PREDICTED: RNA-binding
            protein FUS-like [Malus domestica]
          Length = 658

 Score =  382 bits (980), Expect = e-103
 Identities = 206/397 (51%), Positives = 253/397 (63%), Gaps = 9/397 (2%)
 Frame = -2

Query: 1524 MDPVTDEQLDYGDEEYAGNQKMQYHQGGAIPALAXXXXXXXXXXXXDLYNDVNVGEGFLQ 1345
            MDP+ DEQ+DY DEEY G+QK+QY   GAI ALA            DLYNDVNVGEGF+Q
Sbjct: 1    MDPMGDEQIDYEDEEYGGSQKLQYQGSGAISALADEEPMVEDDEYDDLYNDVNVGEGFMQ 60

Query: 1344 MQRSETQVP-SGVGNSGFQSSKSNVPGTRVEAVATQEVNNARVSNEVNYAVAAVQFPEQK 1168
            M RSE  VP  GVGN G Q+ K+NVP  R  A  +Q++    VS +  Y+ A  QFPEQ 
Sbjct: 61   MHRSEAPVPPGGVGNGGLQAQKTNVPEPRARAGVSQDLKIPGVSVQGKYSGAGAQFPEQN 120

Query: 1167 SSLPA------SGGLAQTMDASQRGRLPEMAHNSQAGHLGYQGSANMPHKTAADRMNNSE 1006
                A      S G       SQ+GR+ EM H++Q   +G+QGS  +P     D  + + 
Sbjct: 121  QPPVAKEPELGSTGYVGGASGSQKGRVMEMTHDTQVRQMGFQGSTTIPPNVGIDSSDITG 180

Query: 1005 KVIGEPAPLMYPNMSSTKGVPQVPPNQITPNTNVNVNRSMDEEYMIRPSVENGNTMLFVG 826
            K   E  P + P  +   G  Q+P NQ++    +N NR M  E  IRP +ENG+ MLFVG
Sbjct: 181  KGNSEYIPSLNPGTAGPPGAAQIPTNQMS--IKINANRPMVNENQIRPPIENGSAMLFVG 238

Query: 825  ELHWWTTDAEIESVLIQYGKVKEIKFYDERASGKSKGYCQVEFYDPAAASACKEGMNGHN 646
            ELHWWTTDAEIES L QYG+VKEIKF+DERASGKSKGYCQVEF+DPAAA+ACKEGM+G+ 
Sbjct: 239  ELHWWTTDAEIESXLSQYGRVKEIKFFDERASGKSKGYCQVEFHDPAAATACKEGMDGYV 298

Query: 645  FNGRACVVAFATPQTIKQMGSSYTNKTQGQAPSQPQGRNLMNDSVGRGNGASYPSXXXXX 466
            FNGRACVVAFA+PQT+KQMG+SY +K+Q QA +Q  GR  MND VGRG G ++ +     
Sbjct: 299  FNGRACVVAFASPQTLKQMGASYLSKSQXQAQAQQPGRRPMNDGVGRGAGVNFQAGDTGG 358

Query: 465  XXXXXXXXXGNQAPNKGP-GSGPMRGR-GIIGNKNMI 361
                           +GP G GPMRGR G +G KNM+
Sbjct: 359  RNFGRGGWGRGGQGGRGPGGGGPMRGRGGAMGVKNMV 395



 Score = 57.8 bits (138), Expect(2) = 6e-07
 Identities = 24/32 (75%), Positives = 27/32 (84%), Gaps = 3/32 (9%)
 Frame = -3

Query: 89  HSGMWNDTNMGGWGGEEHG---RESSYGGEDN 3
           H+GMWND +MG WGGEEHG   RESSYGG+DN
Sbjct: 503 HAGMWNDPSMGAWGGEEHGRRTRESSYGGDDN 534



 Score = 25.4 bits (54), Expect(2) = 6e-07
 Identities = 10/13 (76%), Positives = 11/13 (84%)
 Frame = -2

Query: 183 MLPPFPAVNSMGL 145
           MLP FP VN+MGL
Sbjct: 458 MLPQFPGVNTMGL 470


>ref|XP_010251347.1| PREDICTED: RNA-binding motif protein, X chromosome-like [Nelumbo
            nucifera]
          Length = 599

 Score =  380 bits (976), Expect = e-102
 Identities = 217/398 (54%), Positives = 259/398 (65%), Gaps = 10/398 (2%)
 Frame = -2

Query: 1524 MDPVTDEQLDYGDEEYAGNQKMQYHQGGAIPALAXXXXXXXXXXXXDLYNDVNVGEGFLQ 1345
            MDP+ +EQLDYGDEEY G QK+QY  GGAI ALA            DLYNDVNVG+GFL+
Sbjct: 1    MDPMAEEQLDYGDEEYGGGQKIQYQGGGAISALAEEEMMGEDDEYDDLYNDVNVGDGFLK 60

Query: 1344 MQRSETQVP-SGVGNSGFQSSKSNVPGTRV-EAVATQEVNNARVSNEVNYAVAAVQFPEQ 1171
            +QR E  VP  G+GN G Q+ K++   +RV E   +QEV+   V  E   +     F EQ
Sbjct: 61   LQRPEAIVPLGGIGNGGIQAQKTDGSRSRVPEPGGSQEVSIPGVGLEGKGSNMVTGFSEQ 120

Query: 1170 KSS-LPASGGLAQ-TMD----ASQRGRLPEMAHNSQAGHLGYQGSANMPHKTAADRMNNS 1009
            K     A  GL + T D     SQ+GR  EM  N+Q G+LG++GSA +P K  AD    S
Sbjct: 121  KKGGFSAGNGLEEGTGDYPDGVSQKGRPLEMGPNAQGGNLGFRGSAPIPPKVGADPSQXS 180

Query: 1008 EKVIGEPAPLMYPNMSSTKGVPQVPPNQITPNTNVNVNRSMDEEYMIRPSVENGNTMLFV 829
             K  GE + L     +     PQ+P N++  N NVN+NR M  E M R +VENG TMLFV
Sbjct: 181  GKFAGESSSLPDSGTAGPXSAPQMPSNRM--NMNVNMNRPMXNENMNRXAVENGTTMLFV 238

Query: 828  GELHWWTTDAEIESVLIQYGKVKEIKFYDERASGKSKGYCQVEFYDPAAASACKEGMNGH 649
            GELHWWTTDAE+E VL QYG+VKEIKF+DERASGKSKGYCQVEFYDPAAA+ACKEGM GH
Sbjct: 239  GELHWWTTDAELEXVLSQYGRVKEIKFFDERASGKSKGYCQVEFYDPAAAAACKEGMXGH 298

Query: 648  NFNGRACVVAFATPQTIKQMGSSYTNKTQGQAPSQPQGRNLMNDSVGRGNGASYPSXXXX 469
             FNGRACVVAFA+ QT+KQMG++Y NKTQ Q+ SQPQGR  MND VGRG G ++P+    
Sbjct: 299  VFNGRACVVAFASXQTLKQMGAAYLNKTQMQSQSQPQGRRFMNDGVGRGGGMNHPAGEVA 358

Query: 468  XXXXXXXXXXGNQAP-NKGPGSGPMRGR-GIIGNKNMI 361
                      G     N+GPG G  RGR G IG K M+
Sbjct: 359  RNYGKXPWGRGGHGMINRGPGGGAXRGRGGAIGAKGMV 396


>ref|XP_012085551.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            6-like [Jatropha curcas] gi|802723892|ref|XP_012085552.1|
            PREDICTED: cleavage and polyadenylation specificity
            factor subunit 6-like [Jatropha curcas]
            gi|802723894|ref|XP_012085553.1| PREDICTED: cleavage and
            polyadenylation specificity factor subunit 6-like
            [Jatropha curcas] gi|643714049|gb|KDP26714.1|
            hypothetical protein JCGZ_17872 [Jatropha curcas]
          Length = 656

 Score =  377 bits (968), Expect = e-101
 Identities = 211/397 (53%), Positives = 263/397 (66%), Gaps = 12/397 (3%)
 Frame = -2

Query: 1515 VTDEQLDYGDEEYAGNQKMQYHQGGAIPALAXXXXXXXXXXXXDLYNDVNVGEGFLQMQR 1336
            + DEQ+DY DEEY GNQKMQY   GAIPALA             LYNDVNVGE FLQM +
Sbjct: 1    MADEQIDYEDEEYGGNQKMQYQGSGAIPALAEEEMGEDDEYDD-LYNDVNVGENFLQMHQ 59

Query: 1335 SETQVP-SGVGNSGFQSSKSNVPGTRVEAVATQEVNNARVSNEVNYAVAAVQFPEQKS-- 1165
            S+   P + VG+ GFQ+   NV  ++VE   +Q +    V+ E  Y+     FPE K   
Sbjct: 60   SQVPPPPTSVGSGGFQTQ--NVNESKVETGGSQGLKIPEVAVEGKYSDPGTHFPEPKDVP 117

Query: 1164 ---SLPASGGLAQTMDAS--QRGRLPEMAHNSQAGHLGYQGSANMPHKTAADRMNNSEKV 1000
                 P  G +A +  +S  Q+GR+ EM H++QA ++G+ GS+++P     D  + S K 
Sbjct: 118  MGVKGPEMGSVAYSDGSSIAQKGRVMEMTHDAQARNIGFHGSSSVPSNIGVDPSDMSRKT 177

Query: 999  IGEPAPLMYPNMSST--KGVPQVPPNQITPNTNVNVNRSMDEEYMIRPSVENGNTMLFVG 826
              EPAP+  PN ++T  +G+PQ+P NQI+   N++VNR    E  IRP VENG+T+LFVG
Sbjct: 178  ANEPAPV--PNTAATGPRGMPQLPGNQIS--INMDVNRPTVNENQIRPPVENGSTVLFVG 233

Query: 825  ELHWWTTDAEIESVLIQYGKVKEIKFYDERASGKSKGYCQVEFYDPAAASACKEGMNGHN 646
            ELHWWTTDAE+ESVL QYG+VKEIKF+DERASGKSKG+CQVEFYD AAA+ACKEGMNGH 
Sbjct: 234  ELHWWTTDAELESVLSQYGRVKEIKFFDERASGKSKGFCQVEFYDAAAAAACKEGMNGHV 293

Query: 645  FNGRACVVAFATPQTIKQMGSSYTNKTQGQAPSQPQGRNLMNDSVGRGNGASYPSXXXXX 466
            FNGR CVVAFA+PQT+KQMG+SY NKTQGQ+ +Q QGR  MND  GRG+  +Y       
Sbjct: 294  FNGRPCVVAFASPQTLKQMGASYMNKTQGQSQTQNQGRRPMNDGAGRGDNMNYQGGDAGR 353

Query: 465  XXXXXXXXXGNQA-PNKGP-GSGPMRGRGIIGNKNMI 361
                     G Q   N+GP G GPMRGRG +G KNMI
Sbjct: 354  NFGRGGWGRGGQGMMNRGPGGGGPMRGRGAMGPKNMI 390


>ref|XP_002282072.3| PREDICTED: cleavage and polyadenylation specificity factor subunit 6
            isoform X1 [Vitis vinifera]
          Length = 656

 Score =  375 bits (964), Expect = e-101
 Identities = 216/404 (53%), Positives = 260/404 (64%), Gaps = 14/404 (3%)
 Frame = -2

Query: 1530 AFMDPVTDEQLDYGDEEYAGNQKMQYHQGGAIPALAXXXXXXXXXXXXDLYNDVNVGEGF 1351
            A+MDP+ +EQLDY DEEY G QKM +  GGAI ALA            DLYNDVNVGEGF
Sbjct: 5    AYMDPMAEEQLDYEDEEYGGAQKMPFQGGGAISALADDELMGEDDEYDDLYNDVNVGEGF 64

Query: 1350 LQMQRSETQVPSGVGNSG-FQSSKSNVPGTRVEAVATQEVNNARVSNEVNYA-------- 1198
            LQM RSE   PSGV   G FQ+ K++VP  ++EA  +Q +    VS E  Y+        
Sbjct: 65   LQMHRSEAPAPSGVMAGGPFQAHKTDVPPQKLEAGTSQGLIIPGVSIEGKYSNPHFHEKK 124

Query: 1197 --VAAVQFPEQKSSLPASGGLAQTMDASQRGRLPEMAHNSQAGHLGYQGSANMPHKTAAD 1024
                AV+ PE  S+    G        SQ+GR+ EM H++Q  +LG+QGS  +P KT A+
Sbjct: 125  EGPMAVKGPEMGSTSHLDGP-----SVSQKGRVLEMTHDTQVRNLGFQGSTPIPQKTGAE 179

Query: 1023 RMNNSEKVIGEPAPLMYPNMSSTKGVPQVPPNQITPNTNVNVNRSMDEEYMIRPSVENGN 844
              +   K+  E  P++       + VPQ+  NQ+    NVNVNR M  E  IRP+V+NG 
Sbjct: 180  PSDVHGKIANESTPVLNSGTGGPRAVPQMLSNQM--GMNVNVNRPMVNENQIRPAVDNGA 237

Query: 843  TMLFVGELHWWTTDAEIESVLIQYGKVKEIKFYDERASGKSKGYCQVEFYDPAAASACKE 664
            TMLFVGELHWWTTDAE+ESVL QYG+VKEIKF+DERASGKSKGYCQVEFYD +AA+ACKE
Sbjct: 238  TMLFVGELHWWTTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFYDASAAAACKE 297

Query: 663  GMNGHNFNGRACVVAFATPQTIKQMGSSYTNKTQGQAPSQPQGRNLMNDSVGRGNGASYP 484
            GMNG+ FNGRACVVAFA+PQT+KQMG+SY NKTQ Q  SQ QGR  MND VGRG G +  
Sbjct: 298  GMNGYIFNGRACVVAFASPQTLKQMGASYMNKTQAQ--SQSQGRRPMNDGVGRGGGMNMQ 355

Query: 483  SXXXXXXXXXXXXXXGNQA-PNKGP-GSGPMRGR-GIIGNKNMI 361
                           G Q   N+GP G GPMRGR G +G KNM+
Sbjct: 356  GGDAGRNYGRGGWGRGGQGILNRGPGGGGPMRGRGGAVGAKNMV 399



 Score = 57.8 bits (138), Expect(2) = 5e-07
 Identities = 24/31 (77%), Positives = 27/31 (87%), Gaps = 3/31 (9%)
 Frame = -3

Query: 89  HSGMWNDTNMGGWGGEEHG---RESSYGGED 6
           H+GMW DT+MGGWGGEEHG   RESSYGG+D
Sbjct: 506 HAGMWTDTSMGGWGGEEHGRRTRESSYGGDD 536



 Score = 25.8 bits (55), Expect(2) = 5e-07
 Identities = 10/13 (76%), Positives = 12/13 (92%)
 Frame = -2

Query: 183 MLPPFPAVNSMGL 145
           M+P FPAVN+MGL
Sbjct: 461 MVPSFPAVNTMGL 473


>ref|XP_006483998.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            CG7185-like isoform X1 [Citrus sinensis]
          Length = 655

 Score =  373 bits (958), Expect = e-100
 Identities = 204/394 (51%), Positives = 245/394 (62%), Gaps = 9/394 (2%)
 Frame = -2

Query: 1515 VTDEQLDYGDEEYAGNQKMQYHQGGAIPALAXXXXXXXXXXXXDLYNDVNVGEGFLQMQR 1336
            + +EQ+DY ++EY G QKMQY  GGAIPALA            DLYNDVNVG+G LQ Q+
Sbjct: 1    MAEEQIDYEEDEYGGAQKMQYQGGGAIPALADEELMGEDDEYDDLYNDVNVGDGLLQFQQ 60

Query: 1335 SETQVPS-GVGNSGFQSSKSNVPGTRVEAVATQEVNNARVSNEVNYAVAAVQFPEQKSSL 1159
             E   PS GVGN   Q  K++VP  RV+   +Q  N   VS E  Y  A   FP Q    
Sbjct: 61   PEAPPPSAGVGNGRLQVKKTDVPEQRVQVGGSQGSNIPGVSVEGKYTNAGSHFPAQNDVQ 120

Query: 1158 PA-------SGGLAQTMDASQRGRLPEMAHNSQAGHLGYQGSANMPHKTAADRMNNSEKV 1000
             A       SG        SQ+G + E  H++   ++G+QGS + P +T  D  N   +V
Sbjct: 121  VAVNRPNMGSGNYPDGASVSQKGSVQETTHDAHVRNMGFQGSTSGPSRTGVDPSNMPGRV 180

Query: 999  IGEPAPLMYPNMSSTKGVPQVPPNQITPNTNVNVNRSMDEEYMIRPSVENGNTMLFVGEL 820
              EPAP++ P  +  +G   +P NQ+    N NVNR M  E  IRP +ENG TMLFVGEL
Sbjct: 181  ANEPAPVLNPGAAGPQGA-LIPANQM--GVNANVNRVMVNENQIRPPLENGGTMLFVGEL 237

Query: 819  HWWTTDAEIESVLIQYGKVKEIKFYDERASGKSKGYCQVEFYDPAAASACKEGMNGHNFN 640
            HWWTTDAE+ESVL QYG+ KEIKF+DERASGKSKGYCQVEF+D AAA+ACK+GMNGH FN
Sbjct: 238  HWWTTDAELESVLSQYGRAKEIKFFDERASGKSKGYCQVEFFDAAAAAACKDGMNGHVFN 297

Query: 639  GRACVVAFATPQTIKQMGSSYTNKTQGQAPSQPQGRNLMNDSVGRGNGASYPSXXXXXXX 460
            GR CVVAFA+PQT+KQMG+SY NK QGQ  SQ QG   MND  GRG   +Y S       
Sbjct: 298  GRPCVVAFASPQTLKQMGASYMNKNQGQPQSQNQGSRPMNDGGGRGGNTNYQSGDGGRNF 357

Query: 459  XXXXXXXGNQ-APNKGPGSGPMRGRGIIGNKNMI 361
                   G Q  PN+GPG G MRGRG +G +NMI
Sbjct: 358  GRGGWGRGGQGVPNRGPGGGAMRGRGPMGARNMI 391



 Score = 54.3 bits (129), Expect(2) = 2e-06
 Identities = 23/32 (71%), Positives = 26/32 (81%), Gaps = 3/32 (9%)
 Frame = -3

Query: 92  PHSGMWNDTNMGGWGGEEHG---RESSYGGED 6
           PH GMW D++MGGW GEEHG   RESSYGG+D
Sbjct: 501 PHPGMWTDSSMGGWLGEEHGRRTRESSYGGDD 532



 Score = 26.9 bits (58), Expect(2) = 2e-06
 Identities = 11/13 (84%), Positives = 12/13 (92%)
 Frame = -2

Query: 183 MLPPFPAVNSMGL 145
           MLP FPAVN+MGL
Sbjct: 457 MLPSFPAVNAMGL 469


>ref|XP_010650880.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            CG7185 isoform X2 [Vitis vinifera]
            gi|731372808|ref|XP_010650883.1| PREDICTED: cleavage and
            polyadenylation specificity factor subunit CG7185 isoform
            X2 [Vitis vinifera] gi|731372811|ref|XP_010650886.1|
            PREDICTED: cleavage and polyadenylation specificity
            factor subunit CG7185 isoform X2 [Vitis vinifera]
          Length = 650

 Score =  373 bits (957), Expect = e-100
 Identities = 215/402 (53%), Positives = 258/402 (64%), Gaps = 14/402 (3%)
 Frame = -2

Query: 1524 MDPVTDEQLDYGDEEYAGNQKMQYHQGGAIPALAXXXXXXXXXXXXDLYNDVNVGEGFLQ 1345
            MDP+ +EQLDY DEEY G QKM +  GGAI ALA            DLYNDVNVGEGFLQ
Sbjct: 1    MDPMAEEQLDYEDEEYGGAQKMPFQGGGAISALADDELMGEDDEYDDLYNDVNVGEGFLQ 60

Query: 1344 MQRSETQVPSGVGNSG-FQSSKSNVPGTRVEAVATQEVNNARVSNEVNYA---------- 1198
            M RSE   PSGV   G FQ+ K++VP  ++EA  +Q +    VS E  Y+          
Sbjct: 61   MHRSEAPAPSGVMAGGPFQAHKTDVPPQKLEAGTSQGLIIPGVSIEGKYSNPHFHEKKEG 120

Query: 1197 VAAVQFPEQKSSLPASGGLAQTMDASQRGRLPEMAHNSQAGHLGYQGSANMPHKTAADRM 1018
              AV+ PE  S+    G        SQ+GR+ EM H++Q  +LG+QGS  +P KT A+  
Sbjct: 121  PMAVKGPEMGSTSHLDGP-----SVSQKGRVLEMTHDTQVRNLGFQGSTPIPQKTGAEPS 175

Query: 1017 NNSEKVIGEPAPLMYPNMSSTKGVPQVPPNQITPNTNVNVNRSMDEEYMIRPSVENGNTM 838
            +   K+  E  P++       + VPQ+  NQ+    NVNVNR M  E  IRP+V+NG TM
Sbjct: 176  DVHGKIANESTPVLNSGTGGPRAVPQMLSNQM--GMNVNVNRPMVNENQIRPAVDNGATM 233

Query: 837  LFVGELHWWTTDAEIESVLIQYGKVKEIKFYDERASGKSKGYCQVEFYDPAAASACKEGM 658
            LFVGELHWWTTDAE+ESVL QYG+VKEIKF+DERASGKSKGYCQVEFYD +AA+ACKEGM
Sbjct: 234  LFVGELHWWTTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFYDASAAAACKEGM 293

Query: 657  NGHNFNGRACVVAFATPQTIKQMGSSYTNKTQGQAPSQPQGRNLMNDSVGRGNGASYPSX 478
            NG+ FNGRACVVAFA+PQT+KQMG+SY NKTQ Q  SQ QGR  MND VGRG G +    
Sbjct: 294  NGYIFNGRACVVAFASPQTLKQMGASYMNKTQAQ--SQSQGRRPMNDGVGRGGGMNMQGG 351

Query: 477  XXXXXXXXXXXXXGNQA-PNKGP-GSGPMRGR-GIIGNKNMI 361
                         G Q   N+GP G GPMRGR G +G KNM+
Sbjct: 352  DAGRNYGRGGWGRGGQGILNRGPGGGGPMRGRGGAVGAKNMV 393



 Score = 57.8 bits (138), Expect(2) = 5e-07
 Identities = 24/31 (77%), Positives = 27/31 (87%), Gaps = 3/31 (9%)
 Frame = -3

Query: 89  HSGMWNDTNMGGWGGEEHG---RESSYGGED 6
           H+GMW DT+MGGWGGEEHG   RESSYGG+D
Sbjct: 500 HAGMWTDTSMGGWGGEEHGRRTRESSYGGDD 530



 Score = 25.8 bits (55), Expect(2) = 5e-07
 Identities = 10/13 (76%), Positives = 12/13 (92%)
 Frame = -2

Query: 183 MLPPFPAVNSMGL 145
           M+P FPAVN+MGL
Sbjct: 455 MVPSFPAVNTMGL 467


>ref|XP_009359255.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 6
            [Pyrus x bretschneideri]
          Length = 656

 Score =  373 bits (957), Expect = e-100
 Identities = 200/397 (50%), Positives = 254/397 (63%), Gaps = 9/397 (2%)
 Frame = -2

Query: 1524 MDPVTDEQLDYGDEEYAGNQKMQYHQGGAIPALAXXXXXXXXXXXXDLYNDVNVGEGFLQ 1345
            M+P+ +EQ+DY DEEY G  K+QY   GAI ALA            DLYNDVNVGEGF+Q
Sbjct: 1    MEPLGEEQIDYEDEEYGGAHKLQYQGSGAISALADEELMVEDDEFDDLYNDVNVGEGFMQ 60

Query: 1344 MQRSETQVPSG-VGNSGFQSSKSNVPGTRVEAVATQEVNNARVSNEVNYAVAAVQFPEQK 1168
            M RSE  +P+G VGN G Q+ K++VP  RV++  +Q++    VS +  Y+ A  QFPEQ 
Sbjct: 61   MHRSEAPLPTGGVGNGGLQAQKTDVPEPRVQSGVSQDLKIPGVSVQGKYSGAGAQFPEQN 120

Query: 1167 SSLPA------SGGLAQTMDASQRGRLPEMAHNSQAGHLGYQGSANMPHKTAADRMNNSE 1006
                A      S G A     SQ+GR+ +M H++Q  H+ +QGS  MP     D  + + 
Sbjct: 121  QPPVAKEPELGSTGYASGASGSQKGRVMDMTHDTQVRHMAFQGSTTMPPNVGVDSSDITG 180

Query: 1005 KVIGEPAPLMYPNMSSTKGVPQVPPNQITPNTNVNVNRSMDEEYMIRPSVENGNTMLFVG 826
            K   E  P + P  +   G  Q+P NQ++    +N NR M  E  IRP +ENG+  LFVG
Sbjct: 181  KGNSEFVPSLNPASAGPPGATQIPTNQMS--IKINANRPMVNENQIRPPIENGSATLFVG 238

Query: 825  ELHWWTTDAEIESVLIQYGKVKEIKFYDERASGKSKGYCQVEFYDPAAASACKEGMNGHN 646
            ELHWWTTDAEIESV+ QYG+VKEIKF+DERASGKSKGYCQVEF+D AAA+ACKEGM+G+ 
Sbjct: 239  ELHWWTTDAEIESVISQYGRVKEIKFFDERASGKSKGYCQVEFHDQAAATACKEGMDGYV 298

Query: 645  FNGRACVVAFATPQTIKQMGSSYTNKTQGQAPSQPQGRNLMNDSVGRGNGASYPSXXXXX 466
            FNGRACVVAFA+PQT+KQMG+SY +K+QGQA +Q  GR  MND  GRG G ++ +     
Sbjct: 299  FNGRACVVAFASPQTLKQMGASYLSKSQGQAQAQQPGRRPMNDGGGRGGGVNFQAGDPGG 358

Query: 465  XXXXXXXXXGNQAPNKGP-GSGPMRGR-GIIGNKNMI 361
                           +GP G GPMRGR G +G KNM+
Sbjct: 359  RNFGRGGWGRGGQGVRGPGGGGPMRGRGGAMGAKNMV 395



 Score = 57.8 bits (138), Expect(2) = 6e-07
 Identities = 24/32 (75%), Positives = 27/32 (84%), Gaps = 3/32 (9%)
 Frame = -3

Query: 89  HSGMWNDTNMGGWGGEEHG---RESSYGGEDN 3
           H+GMWND +MG WGGEEHG   RESSYGG+DN
Sbjct: 503 HAGMWNDPSMGAWGGEEHGRRTRESSYGGDDN 534



 Score = 25.4 bits (54), Expect(2) = 6e-07
 Identities = 10/13 (76%), Positives = 11/13 (84%)
 Frame = -2

Query: 183 MLPPFPAVNSMGL 145
           MLP FP VN+MGL
Sbjct: 458 MLPQFPGVNTMGL 470


>ref|XP_007044902.1| RNA-binding family protein isoform 1 [Theobroma cacao]
            gi|590695488|ref|XP_007044903.1| RNA-binding family
            protein isoform 1 [Theobroma cacao]
            gi|508708837|gb|EOY00734.1| RNA-binding family protein
            isoform 1 [Theobroma cacao] gi|508708838|gb|EOY00735.1|
            RNA-binding family protein isoform 1 [Theobroma cacao]
          Length = 653

 Score =  373 bits (957), Expect = e-100
 Identities = 202/397 (50%), Positives = 252/397 (63%), Gaps = 9/397 (2%)
 Frame = -2

Query: 1524 MDPVTDEQLDYGDEEYAGNQKMQYHQGGAIPALAXXXXXXXXXXXXDLYNDVNVGEGFLQ 1345
            MD + +EQ+D+GDEEY G QKMQY   GAIPALA            DLYNDVNVGEGFLQ
Sbjct: 1    MDAMAEEQIDFGDEEYGGAQKMQYQGSGAIPALADEEMMGEDDEYDDLYNDVNVGEGFLQ 60

Query: 1344 MQRSETQV-PSGVGNSGFQSSKSNVPGTRVEAVATQEVNNARVSNEVNYAVAAVQFPEQK 1168
            +QRSE    P G+G++G Q+ K+  P  R EA  +Q +N   VS +  +     ++PEQ 
Sbjct: 61   LQRSEAPPQPGGMGSTGLQAQKNEAPEPRGEAGGSQGLNIPGVSVQGKHLNVTARYPEQD 120

Query: 1167 SSLPA-------SGGLAQTMDASQRGRLPEMAHNSQAGHLGYQGSANMPHKTAADRMNNS 1009
               PA       SG        SQ+GR+ E   ++Q  ++G+QG ++  HK   D     
Sbjct: 121  GQ-PAVSRPEMGSGSYPSGTSISQKGRVMEGTQDTQVKNMGFQGLSSASHKVGIDPSGVP 179

Query: 1008 EKVIGEPAPLMYPNMSSTKGVPQVPPNQITPNTNVNVNRSMDEEYMIRPSVENGNTMLFV 829
            +K+   PA  +       +G P VPPNQ+     +NVN  M  E  +RP +ENG TMLFV
Sbjct: 180  QKIANVPAQSLNSGTGGPQGAPHVPPNQM----GLNVNHPMISENQVRPPIENGPTMLFV 235

Query: 828  GELHWWTTDAEIESVLIQYGKVKEIKFYDERASGKSKGYCQVEFYDPAAASACKEGMNGH 649
            GELHWWTTDAE+ESVL QYG+VKEIKF+DERASGKSKGYCQVEFYDPA+A+ACKEGM+G+
Sbjct: 236  GELHWWTTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFYDPASAAACKEGMDGY 295

Query: 648  NFNGRACVVAFATPQTIKQMGSSYTNKTQGQAPSQPQGRNLMNDSVGRGNGASYPSXXXX 469
             FNGRACVVAFA+PQT+KQMG+SY NK QGQ+ +QPQGR   ND +GRG   +Y S    
Sbjct: 296  MFNGRACVVAFASPQTLKQMGASYMNKNQGQSQAQPQGRR-PNDGLGRGGNMNYQSGDAG 354

Query: 468  XXXXXXXXXXGNQ-APNKGPGSGPMRGRGIIGNKNMI 361
                      G Q   N+    GPMRGRG +G KNM+
Sbjct: 355  RNYGRGGWGRGGQGVVNRSGVGGPMRGRGGVGVKNMV 391


>ref|XP_006438180.1| hypothetical protein CICLE_v10030917mg [Citrus clementina]
            gi|567891321|ref|XP_006438181.1| hypothetical protein
            CICLE_v10030917mg [Citrus clementina]
            gi|557540376|gb|ESR51420.1| hypothetical protein
            CICLE_v10030917mg [Citrus clementina]
            gi|557540377|gb|ESR51421.1| hypothetical protein
            CICLE_v10030917mg [Citrus clementina]
          Length = 655

 Score =  371 bits (953), Expect = e-100
 Identities = 202/394 (51%), Positives = 244/394 (61%), Gaps = 9/394 (2%)
 Frame = -2

Query: 1515 VTDEQLDYGDEEYAGNQKMQYHQGGAIPALAXXXXXXXXXXXXDLYNDVNVGEGFLQMQR 1336
            + +EQ+DY ++EY G QKMQY  GGAIPALA            DLYND+NVG+G LQ Q+
Sbjct: 1    MAEEQIDYEEDEYGGAQKMQYQGGGAIPALADEELMGEDDEYDDLYNDINVGDGLLQFQQ 60

Query: 1335 SETQVPS-GVGNSGFQSSKSNVPGTRVEAVATQEVNNARVSNEVNYAVAAVQFPEQKSSL 1159
             E   PS GVGN   Q  K++VP  RV+   +Q  N   VS E  Y  A   FP Q    
Sbjct: 61   PEAPPPSAGVGNGRLQVKKTDVPEQRVQVGGSQGSNIPGVSVEGKYTNAGSDFPAQNDVQ 120

Query: 1158 PA-------SGGLAQTMDASQRGRLPEMAHNSQAGHLGYQGSANMPHKTAADRMNNSEKV 1000
             A       SG        SQ+G + E  H++   ++G+QGS + P +T  D  N   + 
Sbjct: 121  VAVNRPNMGSGNYPDGASVSQKGSVQETTHDAHVRNMGFQGSTSGPSRTGVDPSNMPGRA 180

Query: 999  IGEPAPLMYPNMSSTKGVPQVPPNQITPNTNVNVNRSMDEEYMIRPSVENGNTMLFVGEL 820
              EPAP++ P  +  +G   +P NQ+    N NVNR M  E  IRP +ENG TMLFVGEL
Sbjct: 181  ANEPAPVLNPGAAGPQGA-LIPANQM--GVNANVNRVMVNENQIRPPLENGGTMLFVGEL 237

Query: 819  HWWTTDAEIESVLIQYGKVKEIKFYDERASGKSKGYCQVEFYDPAAASACKEGMNGHNFN 640
            HWWTTDAE+ESVL QYG+ KEIKF+DERASGKSKGYCQVEF+D AAA+ACK+GMNGH FN
Sbjct: 238  HWWTTDAELESVLSQYGRAKEIKFFDERASGKSKGYCQVEFFDAAAAAACKDGMNGHVFN 297

Query: 639  GRACVVAFATPQTIKQMGSSYTNKTQGQAPSQPQGRNLMNDSVGRGNGASYPSXXXXXXX 460
            GR CVVAFA+PQT+KQMG+SY NK QGQ  SQ QG   MND  GRG   +Y S       
Sbjct: 298  GRPCVVAFASPQTLKQMGASYMNKNQGQPQSQNQGSRPMNDGGGRGGNTNYQSGDGGRNF 357

Query: 459  XXXXXXXGNQ-APNKGPGSGPMRGRGIIGNKNMI 361
                   G Q  PN+GPG G MRGRG +G +NMI
Sbjct: 358  GRGGWGRGGQGVPNRGPGGGAMRGRGPMGARNMI 391



 Score = 54.7 bits (130), Expect(2) = 2e-06
 Identities = 23/32 (71%), Positives = 26/32 (81%), Gaps = 3/32 (9%)
 Frame = -3

Query: 92  PHSGMWNDTNMGGWGGEEHG---RESSYGGED 6
           PH GMW D++MGGW GEEHG   RESSYGG+D
Sbjct: 501 PHPGMWTDSSMGGWVGEEHGRRTRESSYGGDD 532



 Score = 26.9 bits (58), Expect(2) = 2e-06
 Identities = 11/13 (84%), Positives = 12/13 (92%)
 Frame = -2

Query: 183 MLPPFPAVNSMGL 145
           MLP FPAVN+MGL
Sbjct: 457 MLPSFPAVNAMGL 469