BLASTX nr result
ID: Papaver32_contig00047195
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver32_contig00047195
(467 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BAB10876.1 polyprotein [Arabidopsis thaliana] 71 2e-21
AAC02664.1 polyprotein [Arabidopsis thaliana] 70 5e-21
AAC02666.1 polyprotein [Arabidopsis thaliana] 70 7e-21
AAC02669.1 polyprotein [Arabidopsis thaliana] 70 7e-21
AAC02672.1 polyprotein, partial [Arabidopsis arenosa] 70 2e-20
XP_010507514.1 PREDICTED: uncharacterized protein LOC104784148 [... 69 2e-19
CAN77680.1 hypothetical protein VITISV_040762 [Vitis vinifera] 65 1e-18
XP_018822974.1 PREDICTED: uncharacterized protein LOC108992786 [... 66 2e-18
CDY58610.1 BnaCnng33390D [Brassica napus] 65 8e-18
XP_013731591.1 PREDICTED: uncharacterized protein LOC106435270 [... 64 8e-18
AAD14478.1 Strong similarity to gb|AF039376 Evelknievel retrotra... 65 1e-17
CAN83506.1 hypothetical protein VITISV_027576 [Vitis vinifera] 59 2e-17
BAM42646.1 polyprotein [Arabidopsis thaliana] 66 3e-17
BAA78426.1 polyprotein [Arabidopsis thaliana] 66 4e-17
BAM42650.1 Polyprotein [Arabidopsis thaliana] 66 4e-17
BAM42649.1 Polyprotein [Arabidopsis thaliana] 66 4e-17
BAM42647.1 polyprotein [Arabidopsis thaliana] BAM42648.1 polypro... 66 4e-17
AAC79110.1 putative polyprotein of LTR transposon [Arabidopsis t... 66 4e-17
BAA78424.1 polyprotein [Arabidopsis thaliana] BAM44533.1 polypro... 66 4e-17
AAB82754.1 retrofit [Oryza longistaminata] 61 7e-17
>BAB10876.1 polyprotein [Arabidopsis thaliana]
Length = 1429
Score = 71.2 bits (173), Expect(2) = 2e-21
Identities = 31/54 (57%), Positives = 42/54 (77%)
Frame = +3
Query: 93 WLPDSGATNHMTNTLGNLSCSSEYSGPDQVRVASGSNLPIYHTGNAILPTPNRS 254
W+ DSGAT+H+T+ L NLS Y+G ++V +A GS LPI HTG+A+LPTP+RS
Sbjct: 314 WVLDSGATHHLTSDLANLSMHQPYTGGEEVTIADGSGLPISHTGSALLPTPSRS 367
Score = 58.2 bits (139), Expect(2) = 2e-21
Identities = 33/77 (42%), Positives = 45/77 (58%), Gaps = 4/77 (5%)
Frame = +1
Query: 229 PSYPLLTDQITGKVVLRGKLRNGLYTLGPVSSP----ITAMVGERTSLQNWHARLGHPML 396
P++ + D TG +L+G+ RN LY PV+ +TA +T L +WH RLGHP L
Sbjct: 401 PAHFQVKDLNTGARLLQGRTRNELYEW-PVNQKSITILTASPSPKTDLSSWHQRLGHPAL 459
Query: 397 KTVKAVVSRHHLPISTT 447
+K VVS HLP+S T
Sbjct: 460 PILKDVVSHFHLPLSNT 476
>AAC02664.1 polyprotein [Arabidopsis thaliana]
Length = 1451
Score = 70.5 bits (171), Expect(2) = 5e-21
Identities = 30/55 (54%), Positives = 42/55 (76%)
Frame = +3
Query: 90 DWLPDSGATNHMTNTLGNLSCSSEYSGPDQVRVASGSNLPIYHTGNAILPTPNRS 254
+WL DSGAT+H+T+ L NL+ Y+G ++V +A GS LPI H+G+A+LPTP RS
Sbjct: 332 NWLLDSGATHHLTSNLNNLALHQPYNGDEEVTIADGSGLPISHSGSALLPTPTRS 386
Score = 57.8 bits (138), Expect(2) = 5e-21
Identities = 32/74 (43%), Positives = 45/74 (60%), Gaps = 3/74 (4%)
Frame = +1
Query: 229 PSYPLLTDQITGKVVLRGKLRNGLYTLGPVSSPITAMVGE---RTSLQNWHARLGHPMLK 399
P++ + D TG +L+GK +N LY SS T+M +T L +WHARLGHP L
Sbjct: 420 PAHFQVKDLSTGARLLQGKTKNELYEWPVNSSIATSMFASPTPKTDLPSWHARLGHPSLP 479
Query: 400 TVKAVVSRHHLPIS 441
+KA++S+ LPIS
Sbjct: 480 ILKALISKFSLPIS 493
>AAC02666.1 polyprotein [Arabidopsis thaliana]
Length = 1451
Score = 70.1 bits (170), Expect(2) = 7e-21
Identities = 30/55 (54%), Positives = 42/55 (76%)
Frame = +3
Query: 90 DWLPDSGATNHMTNTLGNLSCSSEYSGPDQVRVASGSNLPIYHTGNAILPTPNRS 254
+WL DSGAT+H+T+ L NL+ Y+G ++V +A GS LPI H+G+A+LPTP RS
Sbjct: 332 NWLLDSGATHHLTSDLNNLALHQPYNGDEEVTIADGSGLPISHSGSALLPTPTRS 386
Score = 57.8 bits (138), Expect(2) = 7e-21
Identities = 32/74 (43%), Positives = 45/74 (60%), Gaps = 3/74 (4%)
Frame = +1
Query: 229 PSYPLLTDQITGKVVLRGKLRNGLYTLGPVSSPITAMVGE---RTSLQNWHARLGHPMLK 399
P++ + D TG +L+GK +N LY SS T+M +T L +WHARLGHP L
Sbjct: 420 PAHFQVKDLSTGARLLQGKTKNELYEWPVNSSIATSMFASPTPKTDLPSWHARLGHPSLP 479
Query: 400 TVKAVVSRHHLPIS 441
+KA++S+ LPIS
Sbjct: 480 ILKALISKFSLPIS 493
>AAC02669.1 polyprotein [Arabidopsis thaliana]
Length = 1451
Score = 70.1 bits (170), Expect(2) = 7e-21
Identities = 30/55 (54%), Positives = 42/55 (76%)
Frame = +3
Query: 90 DWLPDSGATNHMTNTLGNLSCSSEYSGPDQVRVASGSNLPIYHTGNAILPTPNRS 254
+WL DSGAT+H+T+ L NL+ Y+G ++V +A GS LPI H+G+A+LPTP RS
Sbjct: 332 NWLLDSGATHHLTSDLNNLALHQPYNGDEEVTIADGSGLPISHSGSALLPTPTRS 386
Score = 57.8 bits (138), Expect(2) = 7e-21
Identities = 32/74 (43%), Positives = 45/74 (60%), Gaps = 3/74 (4%)
Frame = +1
Query: 229 PSYPLLTDQITGKVVLRGKLRNGLYTLGPVSSPITAMVGE---RTSLQNWHARLGHPMLK 399
P++ + D TG +L+GK +N LY SS T+M +T L +WHARLGHP L
Sbjct: 420 PAHFQVKDLSTGARLLQGKTKNELYEWPVNSSIATSMFASPTPKTDLPSWHARLGHPSLP 479
Query: 400 TVKAVVSRHHLPIS 441
+KA++S+ LPIS
Sbjct: 480 ILKALISKFSLPIS 493
>AAC02672.1 polyprotein, partial [Arabidopsis arenosa]
Length = 1390
Score = 69.7 bits (169), Expect(2) = 2e-20
Identities = 30/55 (54%), Positives = 42/55 (76%)
Frame = +3
Query: 90 DWLPDSGATNHMTNTLGNLSCSSEYSGPDQVRVASGSNLPIYHTGNAILPTPNRS 254
+WL DSGAT+H+T+ L NL+ Y+G ++V +A GS LPI H+G+A+LPTP RS
Sbjct: 332 NWLLDSGATHHLTSDLNNLALHQPYNGGEEVTIADGSGLPISHSGSALLPTPTRS 386
Score = 56.2 bits (134), Expect(2) = 2e-20
Identities = 31/74 (41%), Positives = 44/74 (59%), Gaps = 3/74 (4%)
Frame = +1
Query: 229 PSYPLLTDQITGKVVLRGKLRNGLYTLGPVSSPITAMVGE---RTSLQNWHARLGHPMLK 399
P++ + D TG +L+GK +N LY SS T+M +T L +WHARLGHP L
Sbjct: 420 PAHFQVKDLSTGARLLQGKTKNELYEWPVNSSIATSMFASPTPKTDLPSWHARLGHPSLP 479
Query: 400 TVKAVVSRHHLPIS 441
+K ++S+ LPIS
Sbjct: 480 ILKTLISKFSLPIS 493
>XP_010507514.1 PREDICTED: uncharacterized protein LOC104784148 [Camelina sativa]
Length = 497
Score = 69.3 bits (168), Expect(2) = 2e-19
Identities = 30/55 (54%), Positives = 42/55 (76%)
Frame = +3
Query: 90 DWLPDSGATNHMTNTLGNLSCSSEYSGPDQVRVASGSNLPIYHTGNAILPTPNRS 254
+W+ DSGAT+H+T+ L NLS Y+G ++V +A GS LPI TG+A+LPTP+RS
Sbjct: 273 NWIMDSGATHHLTSDLANLSMHQPYTGGEEVTIADGSGLPISQTGSALLPTPSRS 327
Score = 53.5 bits (127), Expect(2) = 2e-19
Identities = 28/75 (37%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Frame = +1
Query: 229 PSYPLLTDQITGKVVLRGKLRNGLYTLGPVSSPITAMVGE---RTSLQNWHARLGHPMLK 399
P+Y + D TG +L+G+ +N LY +++ IT+ RT L +WH R GHP L
Sbjct: 361 PAYFHVKDLKTGAQLLQGRTKNELYEWPVINNVITSFTTSPQPRTDLSSWHYRFGHPSLP 420
Query: 400 TVKAVVSRHHLPIST 444
+K +VS LP S+
Sbjct: 421 VLKIIVSEFSLPFSS 435
>CAN77680.1 hypothetical protein VITISV_040762 [Vitis vinifera]
Length = 590
Score = 64.7 bits (156), Expect(2) = 1e-18
Identities = 32/74 (43%), Positives = 48/74 (64%), Gaps = 2/74 (2%)
Frame = +1
Query: 229 PSYPLLTDQITGKVVLRGKLRNGLYTL--GPVSSPITAMVGERTSLQNWHARLGHPMLKT 402
P+Y L+ D+ TG+++L+G NG+Y + P ++PI A V ERTS+ WH RLGHP K
Sbjct: 384 PTYFLVKDRRTGEILLQGPCENGVYPMPSSPAATPI-AFVHERTSVTGWHQRLGHPSFKV 442
Query: 403 VKAVVSRHHLPIST 444
V ++S LP ++
Sbjct: 443 VTRLISSFSLPTTS 456
Score = 55.5 bits (132), Expect(2) = 1e-18
Identities = 25/53 (47%), Positives = 35/53 (66%)
Frame = +3
Query: 93 WLPDSGATNHMTNTLGNLSCSSEYSGPDQVRVASGSNLPIYHTGNAILPTPNR 251
WL DS A++++T+ + NL SEY G D+V + GS LPI H+G+ L PNR
Sbjct: 297 WLIDSAASHNITSQVSNLQFHSEYDGTDEVIIGDGSGLPITHSGSLTLSFPNR 349
>XP_018822974.1 PREDICTED: uncharacterized protein LOC108992786 [Juglans regia]
Length = 620
Score = 65.9 bits (159), Expect(2) = 2e-18
Identities = 32/73 (43%), Positives = 45/73 (61%), Gaps = 3/73 (4%)
Frame = +1
Query: 241 LLTDQITGKVVLRGKLRNGLYTLG---PVSSPITAMVGERTSLQNWHARLGHPMLKTVKA 411
L+ D TG +L G +RNGLY+ P S A++GERT+ WH+RLGHP L+ V
Sbjct: 416 LVKDATTGVPLLHGPMRNGLYSFTNVLPSSPSAQALIGERTTPSQWHSRLGHPSLQLVSR 475
Query: 412 VVSRHHLPISTTS 450
++S++ LP S S
Sbjct: 476 IISKYQLPASIQS 488
Score = 53.9 bits (128), Expect(2) = 2e-18
Identities = 24/55 (43%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Frame = +3
Query: 93 WLPDSGATNHMTNTLGNLSCSS-EYSGPDQVRVASGSNLPIYHTGNAILPTPNRS 254
W PD+ ATNH+T+ + NL+ +S Y G +Q+R+ GS LPI + G++ TP+ S
Sbjct: 324 WYPDTAATNHITSDMSNLNITSGPYGGNEQIRIGDGSELPIANIGDSKFITPSHS 378
>CDY58610.1 BnaCnng33390D [Brassica napus]
Length = 856
Score = 64.7 bits (156), Expect(2) = 8e-18
Identities = 29/55 (52%), Positives = 40/55 (72%)
Frame = +3
Query: 90 DWLPDSGATNHMTNTLGNLSCSSEYSGPDQVRVASGSNLPIYHTGNAILPTPNRS 254
+W+ DSGAT+H+T L NLS Y+G ++V +A GS LPI HTG++ L TP+RS
Sbjct: 111 NWILDSGATHHLTTDLNNLSFHQPYNGGEEVVIADGSGLPISHTGSSSLTTPSRS 165
Score = 52.8 bits (125), Expect(2) = 8e-18
Identities = 31/80 (38%), Positives = 47/80 (58%), Gaps = 4/80 (5%)
Frame = +1
Query: 229 PSYPLLTDQITGKVVLRGKLRNGLYTLGPV----SSPITAMVGERTSLQNWHARLGHPML 396
P++ + D TG +L+G+ ++ LY PV S + A +T+L +WHARLGHP
Sbjct: 199 PAHFQVKDLSTGARLLQGRTKDELYEW-PVQTTRSISLFASPSPKTTLSSWHARLGHPSN 257
Query: 397 KTVKAVVSRHHLPISTTSFK 456
++ +VS LP+STTS K
Sbjct: 258 TVLQTLVSHFSLPLSTTSHK 277
>XP_013731591.1 PREDICTED: uncharacterized protein LOC106435270 [Brassica napus]
Length = 826
Score = 64.3 bits (155), Expect(2) = 8e-18
Identities = 29/57 (50%), Positives = 41/57 (71%)
Frame = +3
Query: 84 TYDWLPDSGATNHMTNTLGNLSCSSEYSGPDQVRVASGSNLPIYHTGNAILPTPNRS 254
T WL DSGAT+H+++ L NLS +Y+G ++V V +GS LPI H G+ +LP+ NRS
Sbjct: 288 TSPWLLDSGATHHISSDLANLSLHQQYNGGEEVIVGNGSGLPISHKGSTLLPSSNRS 344
Score = 53.1 bits (126), Expect(2) = 8e-18
Identities = 28/70 (40%), Positives = 42/70 (60%), Gaps = 4/70 (5%)
Frame = +1
Query: 250 DQITGKVVLRGKLRNGLY----TLGPVSSPITAMVGERTSLQNWHARLGHPMLKTVKAVV 417
D TG ++L G+ N LY +L S+ TA+ +T+ +WHARLGHP +K ++
Sbjct: 355 DLKTGDLLLEGRTMNELYEWHVSLPIASTHHTAITNLKTTSTDWHARLGHPSHPILKTII 414
Query: 418 SRHHLPISTT 447
S+ LP+STT
Sbjct: 415 SKFSLPLSTT 424
>AAD14478.1 Strong similarity to gb|AF039376 Evelknievel retrotransposon
polyprotein from Arabidopsis arenosa [Arabidopsis
thaliana]
Length = 1194
Score = 64.7 bits (156), Expect(2) = 1e-17
Identities = 29/55 (52%), Positives = 40/55 (72%)
Frame = +3
Query: 90 DWLPDSGATNHMTNTLGNLSCSSEYSGPDQVRVASGSNLPIYHTGNAILPTPNRS 254
+WL DSGAT+H+T+ L NLS Y+G + V +A GS L I HTG+A++ TP+RS
Sbjct: 287 NWLLDSGATHHITSDLNNLSLHQPYTGGEDVTIADGSGLSISHTGSALISTPSRS 341
Score = 52.0 bits (123), Expect(2) = 1e-17
Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 4/77 (5%)
Frame = +1
Query: 229 PSYPLLTDQITGKVVLRGKLRNGLYTLGPVSSPITAM----VGERTSLQNWHARLGHPML 396
P++ + D TG +L+G+ ++ LY PV+ P + +T L +WH+RLGHP L
Sbjct: 375 PAHFQVKDLKTGVQLLQGRTKDELYEW-PVNPPKPSSHFTTTTPKTDLTSWHSRLGHPSL 433
Query: 397 KTVKAVVSRHHLPISTT 447
T+K VVS+ LP+S +
Sbjct: 434 STLKVVVSQFSLPVSNS 450
>CAN83506.1 hypothetical protein VITISV_027576 [Vitis vinifera]
Length = 1172
Score = 59.3 bits (142), Expect(2) = 2e-17
Identities = 31/75 (41%), Positives = 47/75 (62%)
Frame = +1
Query: 226 MPSYPLLTDQITGKVVLRGKLRNGLYTLGPVSSPITAMVGERTSLQNWHARLGHPMLKTV 405
+PS L+ D TG +L+GK ++G+Y VSSP+ A +TS WH RLGHP +
Sbjct: 319 LPSSFLVKDLRTGATLLKGKTKDGVYEW-LVSSPLLAFSSVKTSSSEWHHRLGHPAFPIL 377
Query: 406 KAVVSRHHLPISTTS 450
K V+S ++L +S++S
Sbjct: 378 KHVISTNNLALSSSS 392
Score = 57.0 bits (136), Expect(2) = 2e-17
Identities = 26/55 (47%), Positives = 36/55 (65%)
Frame = +3
Query: 84 TYDWLPDSGATNHMTNTLGNLSCSSEYSGPDQVRVASGSNLPIYHTGNAILPTPN 248
T WL DSGA++H+T+ L NLS + Y+G D + + G+ LPI HTG+ L T N
Sbjct: 230 TPTWLLDSGASHHITSDLSNLSIHAPYNGSDDIMIDDGTGLPITHTGSLSLHTSN 284
>BAM42646.1 polyprotein [Arabidopsis thaliana]
Length = 1475
Score = 66.2 bits (160), Expect(2) = 3e-17
Identities = 30/55 (54%), Positives = 39/55 (70%)
Frame = +3
Query: 90 DWLPDSGATNHMTNTLGNLSCSSEYSGPDQVRVASGSNLPIYHTGNAILPTPNRS 254
+WL DSGAT+H+T+ NLS Y+G D V +A GS +PI HTG+A LPT +RS
Sbjct: 328 NWLLDSGATHHITSDFNNLSLHQPYTGGDDVMIADGSTIPITHTGSASLPTSSRS 382
Score = 49.3 bits (116), Expect(2) = 3e-17
Identities = 26/72 (36%), Positives = 39/72 (54%), Gaps = 3/72 (4%)
Frame = +1
Query: 250 DQITGKVVLRGKLRNGLYTLGPVSSPITAMVGE---RTSLQNWHARLGHPMLKTVKAVVS 420
D TG +L+GK ++ LY SS +M + + +WH+RLGHP L + +V+S
Sbjct: 423 DLNTGVPLLQGKTKDELYEWPIASSQAVSMFASPCSKATHSSWHSRLGHPSLAILNSVIS 482
Query: 421 RHHLPISTTSFK 456
H LP+ S K
Sbjct: 483 NHSLPVLNPSHK 494
>BAA78426.1 polyprotein [Arabidopsis thaliana]
Length = 1475
Score = 65.9 bits (159), Expect(2) = 4e-17
Identities = 30/55 (54%), Positives = 39/55 (70%)
Frame = +3
Query: 90 DWLPDSGATNHMTNTLGNLSCSSEYSGPDQVRVASGSNLPIYHTGNAILPTPNRS 254
+WL DSGAT+H+T+ NLS Y+G D V +A GS +PI HTG+A LPT +RS
Sbjct: 328 NWLLDSGATHHITSDFNNLSFHQPYTGGDDVMIADGSTIPITHTGSASLPTSSRS 382
Score = 49.3 bits (116), Expect(2) = 4e-17
Identities = 26/72 (36%), Positives = 39/72 (54%), Gaps = 3/72 (4%)
Frame = +1
Query: 250 DQITGKVVLRGKLRNGLYTLGPVSSPITAMVGE---RTSLQNWHARLGHPMLKTVKAVVS 420
D TG +L+GK ++ LY SS +M + + +WH+RLGHP L + +V+S
Sbjct: 423 DLNTGVPLLQGKTKDELYEWPIASSQAVSMFASPCSKATHSSWHSRLGHPSLAILNSVIS 482
Query: 421 RHHLPISTTSFK 456
H LP+ S K
Sbjct: 483 NHSLPVLNPSHK 494
>BAM42650.1 Polyprotein [Arabidopsis thaliana]
Length = 1475
Score = 65.9 bits (159), Expect(2) = 4e-17
Identities = 30/55 (54%), Positives = 39/55 (70%)
Frame = +3
Query: 90 DWLPDSGATNHMTNTLGNLSCSSEYSGPDQVRVASGSNLPIYHTGNAILPTPNRS 254
+WL DSGAT+H+T+ NLS Y+G D V +A GS +PI HTG+A LPT +RS
Sbjct: 328 NWLLDSGATHHITSDFNNLSFHQPYTGGDDVMIADGSTIPITHTGSASLPTSSRS 382
Score = 49.3 bits (116), Expect(2) = 4e-17
Identities = 26/72 (36%), Positives = 39/72 (54%), Gaps = 3/72 (4%)
Frame = +1
Query: 250 DQITGKVVLRGKLRNGLYTLGPVSSPITAMVGE---RTSLQNWHARLGHPMLKTVKAVVS 420
D TG +L+GK ++ LY SS +M + + +WH+RLGHP L + +V+S
Sbjct: 423 DLNTGVPLLQGKTKDELYEWPIASSQAVSMFASPCSKATHSSWHSRLGHPSLAILNSVIS 482
Query: 421 RHHLPISTTSFK 456
H LP+ S K
Sbjct: 483 NHSLPVLNPSHK 494
>BAM42649.1 Polyprotein [Arabidopsis thaliana]
Length = 1475
Score = 65.9 bits (159), Expect(2) = 4e-17
Identities = 30/55 (54%), Positives = 39/55 (70%)
Frame = +3
Query: 90 DWLPDSGATNHMTNTLGNLSCSSEYSGPDQVRVASGSNLPIYHTGNAILPTPNRS 254
+WL DSGAT+H+T+ NLS Y+G D V +A GS +PI HTG+A LPT +RS
Sbjct: 328 NWLLDSGATHHITSDFNNLSFHQPYTGGDDVMIADGSTIPITHTGSASLPTSSRS 382
Score = 49.3 bits (116), Expect(2) = 4e-17
Identities = 26/72 (36%), Positives = 39/72 (54%), Gaps = 3/72 (4%)
Frame = +1
Query: 250 DQITGKVVLRGKLRNGLYTLGPVSSPITAMVGE---RTSLQNWHARLGHPMLKTVKAVVS 420
D TG +L+GK ++ LY SS +M + + +WH+RLGHP L + +V+S
Sbjct: 423 DLNTGVPLLQGKTKDELYEWPIASSQAVSMFASPCSKATHSSWHSRLGHPSLAILNSVIS 482
Query: 421 RHHLPISTTSFK 456
H LP+ S K
Sbjct: 483 NHSLPVLNPSHK 494
>BAM42647.1 polyprotein [Arabidopsis thaliana] BAM42648.1 polyprotein
[Arabidopsis thaliana]
Length = 1475
Score = 65.9 bits (159), Expect(2) = 4e-17
Identities = 30/55 (54%), Positives = 39/55 (70%)
Frame = +3
Query: 90 DWLPDSGATNHMTNTLGNLSCSSEYSGPDQVRVASGSNLPIYHTGNAILPTPNRS 254
+WL DSGAT+H+T+ NLS Y+G D V +A GS +PI HTG+A LPT +RS
Sbjct: 328 NWLLDSGATHHITSDFNNLSFHQPYTGGDDVMIADGSTIPITHTGSASLPTSSRS 382
Score = 49.3 bits (116), Expect(2) = 4e-17
Identities = 26/72 (36%), Positives = 39/72 (54%), Gaps = 3/72 (4%)
Frame = +1
Query: 250 DQITGKVVLRGKLRNGLYTLGPVSSPITAMVGE---RTSLQNWHARLGHPMLKTVKAVVS 420
D TG +L+GK ++ LY SS +M + + +WH+RLGHP L + +V+S
Sbjct: 423 DLNTGVPLLQGKTKDELYEWPIASSQAVSMFASPCSKATHSSWHSRLGHPSLAILNSVIS 482
Query: 421 RHHLPISTTSFK 456
H LP+ S K
Sbjct: 483 NHSLPVLNPSHK 494
>AAC79110.1 putative polyprotein of LTR transposon [Arabidopsis thaliana]
CAB77781.1 putative polyprotein of LTR transposon
[Arabidopsis thaliana]
Length = 1456
Score = 65.9 bits (159), Expect(2) = 4e-17
Identities = 30/55 (54%), Positives = 39/55 (70%)
Frame = +3
Query: 90 DWLPDSGATNHMTNTLGNLSCSSEYSGPDQVRVASGSNLPIYHTGNAILPTPNRS 254
+WL DSGAT+H+T+ NLS Y+G D V +A GS +PI HTG+A LPT +RS
Sbjct: 309 NWLLDSGATHHITSDFNNLSFHQPYTGGDDVMIADGSTIPITHTGSASLPTSSRS 363
Score = 49.3 bits (116), Expect(2) = 4e-17
Identities = 26/72 (36%), Positives = 39/72 (54%), Gaps = 3/72 (4%)
Frame = +1
Query: 250 DQITGKVVLRGKLRNGLYTLGPVSSPITAMVGE---RTSLQNWHARLGHPMLKTVKAVVS 420
D TG +L+GK ++ LY SS +M + + +WH+RLGHP L + +V+S
Sbjct: 404 DLNTGVPLLQGKTKDELYEWPIASSQAVSMFASPCSKATHSSWHSRLGHPSLAILNSVIS 463
Query: 421 RHHLPISTTSFK 456
H LP+ S K
Sbjct: 464 NHSLPVLNPSHK 475
>BAA78424.1 polyprotein [Arabidopsis thaliana] BAM44533.1 polyprotein
[Arabidopsis thaliana]
Length = 1330
Score = 65.9 bits (159), Expect(2) = 4e-17
Identities = 30/55 (54%), Positives = 39/55 (70%)
Frame = +3
Query: 90 DWLPDSGATNHMTNTLGNLSCSSEYSGPDQVRVASGSNLPIYHTGNAILPTPNRS 254
+WL DSGAT+H+T+ NLS Y+G D V +A GS +PI HTG+A LPT +RS
Sbjct: 183 NWLLDSGATHHITSDFNNLSFHQPYTGGDDVMIADGSTIPITHTGSASLPTSSRS 237
Score = 49.3 bits (116), Expect(2) = 4e-17
Identities = 26/72 (36%), Positives = 39/72 (54%), Gaps = 3/72 (4%)
Frame = +1
Query: 250 DQITGKVVLRGKLRNGLYTLGPVSSPITAMVGE---RTSLQNWHARLGHPMLKTVKAVVS 420
D TG +L+GK ++ LY SS +M + + +WH+RLGHP L + +V+S
Sbjct: 278 DLNTGVPLLQGKTKDELYEWPIASSQAVSMFASPCSKATHSSWHSRLGHPSLAILNSVIS 337
Query: 421 RHHLPISTTSFK 456
H LP+ S K
Sbjct: 338 NHSLPVLNPSHK 349
>AAB82754.1 retrofit [Oryza longistaminata]
Length = 1445
Score = 60.8 bits (146), Expect(2) = 7e-17
Identities = 32/72 (44%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Frame = +1
Query: 244 LTDQITGKVVLRGKLRNGLYTLGPVSSPIT---AMVGERTSLQNWHARLGHPMLKTVKAV 414
+ DQ+T V+L GK R+GLY + T A+ + SL WH+RLGHP L VK V
Sbjct: 413 IKDQVTRDVLLEGKCRHGLYPIPKFFGRSTNKQALGAAKLSLSRWHSRLGHPSLPIVKQV 472
Query: 415 VSRHHLPISTTS 450
+SR++LP S S
Sbjct: 473 ISRNNLPCSVES 484
Score = 53.5 bits (127), Expect(2) = 7e-17
Identities = 22/55 (40%), Positives = 37/55 (67%)
Frame = +3
Query: 90 DWLPDSGATNHMTNTLGNLSCSSEYSGPDQVRVASGSNLPIYHTGNAILPTPNRS 254
+W D+GAT+H+T L L+ +Y+G +Q+ ASG+ + I H G+ I+ TP+R+
Sbjct: 320 NWYIDTGATDHITGELEKLTTKEKYNGGEQIHTASGAGMDISHIGHTIVHTPSRN 374