BLASTX nr result

ID: Papaver32_contig00046660 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver32_contig00046660
         (465 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_019244344.1 PREDICTED: uncharacterized protein LOC109224213 [...    49   1e-07
OMO72105.1 reverse transcriptase [Corchorus capsularis]                56   2e-06

>XP_019244344.1 PREDICTED: uncharacterized protein LOC109224213 [Nicotiana
           attenuata]
          Length = 314

 Score = 49.3 bits (116), Expect(2) = 1e-07
 Identities = 28/108 (25%), Positives = 53/108 (49%), Gaps = 4/108 (3%)
 Frame = +3

Query: 141 FKFYDTCLKEPTCIDVIKKSWNIN-TNRPAEDLIVNISNLGINLSNWKNYVFGKPN---K 308
           F+F D  + +   +D++K+ WN+N T      L   ++NL   LS W     G  N    
Sbjct: 195 FRFLDFWVSQKDFMDIVKEVWNVNITGNSMWILQSKLNNLSNMLSKWSRQEIGDINDQES 254

Query: 309 NIKCLLRTIENLEAKSNTQDTKTLINKKHLELEALYDTHEEIAKQQSR 452
             +  ++ +EN++   N++D++  +NK H E        E + KQ+++
Sbjct: 255 RWEDKIQLLENIDIDINSEDSRADVNKAHAEYIKWLSMQESLLKQKTQ 302



 Score = 33.5 bits (75), Expect(2) = 1e-07
 Identities = 11/26 (42%), Positives = 20/26 (76%)
 Frame = +2

Query: 20  NAEWNEEFQHASLQNMVEIGSDHGPI 97
           N  W ++FQH++++++V  GSDH P+
Sbjct: 155 NDSWIQKFQHSTVKHLVRTGSDHRPL 180


>OMO72105.1 reverse transcriptase [Corchorus capsularis]
          Length = 692

 Score = 56.2 bits (134), Expect = 2e-06
 Identities = 37/106 (34%), Positives = 48/106 (45%)
 Frame = +3

Query: 141 FKFYDTCLKEPTCIDVIKKSWNINTNRPAEDLIVNISNLGINLSNWKNYVFGKPNKNIKC 320
           F+F    +K     +VI++SWN N   P  D+  +I   G  L  W   VFG     I C
Sbjct: 371 FRFEHMWIKHDGLEEVIRESWNQN---PMLDVKQSIEACGRVLQFWNKSVFGNVRHKINC 427

Query: 321 LLRTIENLEAKSNTQDTKTLINKKHLELEALYDTHEEIAKQQSRNN 458
             R +ENL      QD    I     EL  LYD  E + +QQS+ N
Sbjct: 428 KQRELENLYVDIQQQDGPQAIQNCVDELNVLYDQEEIMWRQQSKEN 473


Top