BLASTX nr result

ID: Papaver32_contig00046325 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver32_contig00046325
         (606 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_010275032.1 PREDICTED: pentatricopeptide repeat-containing pr...    91   9e-18
XP_006836295.1 PREDICTED: pentatricopeptide repeat-containing pr...    74   6e-12

>XP_010275032.1 PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic [Nelumbo nucifera]
          Length = 598

 Score = 90.9 bits (224), Expect = 9e-18
 Identities = 53/116 (45%), Positives = 69/116 (59%)
 Frame = +3

Query: 255 HSIVSPLLFKFKFPWKIKVPNSIRVQLVNQEKPMNVQTRVTKLSSPTLQVLSQILKQGPS 434
           HS+++     FKF                +++P N     T  +  T+QVL+QI K GP 
Sbjct: 124 HSVITKSTAPFKF----------------RQRPTNFFPMTT--NPATMQVLAQIFKLGPF 165

Query: 435 PDIVTYTTFIKFLGDSGYASEAHELFTFMRESHEPDTIVFTVLIQILCDSKMYGRA 602
            DIV YT  IKFLGDSG+A+EA ELF  MRE+H+PD I FTV+I+IL D KM  +A
Sbjct: 166 ADIVAYTILIKFLGDSGHAAEALELFNKMRETHQPDIISFTVIIRILIDFKMVDQA 221


>XP_006836295.1 PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic [Amborella trichopoda] ERM99148.1
           hypothetical protein AMTR_s00092p00018230 [Amborella
           trichopoda]
          Length = 498

 Score = 73.9 bits (180), Expect = 6e-12
 Identities = 38/81 (46%), Positives = 52/81 (64%), Gaps = 1/81 (1%)
 Frame = +3

Query: 363 QTRVTKLSSPTLQVLSQILKQGPSPDIVTYTTFIKFLGDSGYASEAHELFTFMR-ESHEP 539
           Q +    S+ T Q++++ILK  PSP+++ YT FIK LG  GY  EA+ELF FM+    +P
Sbjct: 39  QNKKVGASTITAQIIAKILKISPSPNVIIYTKFIKKLGRLGYVDEAYELFIFMKLYQCKP 98

Query: 540 DTIVFTVLIQILCDSKMYGRA 602
           D I FT+LIQ LC S    +A
Sbjct: 99  DVISFTILIQALCSSNRLNKA 119


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