BLASTX nr result

ID: Papaver32_contig00045444 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver32_contig00045444
         (502 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_010914156.1 PREDICTED: pentatricopeptide repeat-containing pr...    59   3e-07

>XP_010914156.1 PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Elaeis guineensis]
          Length = 553

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 37/132 (28%), Positives = 59/132 (44%), Gaps = 1/132 (0%)
 Frame = +3

Query: 108 SRFKMHRLRVKVPCHPPLKQHPEPKEMLQTQ-FRLLLEKCKSVEEVNPILSRFVVSGLIR 284
           SR  +  L V +P  P    HP P   + T  F  LLEK  +V+EV  + +  +V GL+R
Sbjct: 6   SRRAISALSVDLPLSPCPSSHPPPNPTITTYPFLSLLEKSSTVKEVKQLHAHAIVLGLVR 65

Query: 285 QSFYLCKLVEVLAHSQNSTXXXXXXXXXEHQSHGLQGEEDLKMAPSTTTFLWNTIIRGYS 464
            ++   +++ + A   N                           P  T F WNT+I+GY 
Sbjct: 66  YTYVTSRILAIYALHANPDIHSALLVFHR--------------IPEPTIFNWNTVIKGYC 111

Query: 465 RSRFPQQGITTY 500
           R+ +P++G+  Y
Sbjct: 112 RTPYPEKGLLFY 123


Top