BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver32_contig00044973
         (779 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AAP94600.1 putative copia-like retrotransposon Hopscotch polypro...   189   4e-51
AAL66754.1 putative copia-like retrotransposon Hopscotch polypro...   189   5e-51
OMO62984.1 Integrase, catalytic core [Corchorus capsularis]           186   5e-50
AAL78658.1 Hopscotch polyprotein, partial [Fagus sylvatica]           172   7e-50
CAN74381.1 hypothetical protein VITISV_007944 [Vitis vinifera]        184   3e-49
XP_019447442.1 PREDICTED: uncharacterized protein LOC109348071 [...   174   4e-46
CAN68489.1 hypothetical protein VITISV_037543 [Vitis vinifera]        174   5e-46
XP_017635962.1 PREDICTED: uncharacterized protein LOC108478037 [...   173   8e-46
CAN61640.1 hypothetical protein VITISV_021909 [Vitis vinifera]        174   9e-46
AAU43956.1 unknown protein [Oryza sativa Japonica Group] AAU4406...   174   9e-46
AAC61290.1 putative retroelement pol polyprotein [Arabidopsis th...   172   2e-45
AAN06870.1 Putative gag-pol polyprotein [Oryza sativa Japonica G...   172   2e-45
ABA97707.2 retrotransposon protein, putative, Ty1-copia subclass...   172   4e-45
OMO94717.1 Integrase, catalytic core [Corchorus capsularis]           172   4e-45
OMO73140.1 Integrase, catalytic core [Corchorus capsularis]           172   4e-45
OMO62875.1 hypothetical protein CCACVL1_22594 [Corchorus capsula...   172   4e-45
AAT85031.1 putative polyprotein [Oryza sativa Japonica Group] AB...   171   6e-45
OMO61427.1 Zinc finger, CCCH-type [Corchorus capsularis]              171   6e-45
AAU90262.1 integrase core domain containing protein [Oryza sativ...   170   1e-44
KYP47921.1 Retrovirus-related Pol polyprotein from transposon TN...   162   1e-44

>AAP94600.1 putative copia-like retrotransposon Hopscotch polyprotein, partial
            [Zea mays]
          Length = 969

 Score =  189 bits (479), Expect = 4e-51
 Identities = 111/266 (41%), Positives = 147/266 (55%), Gaps = 34/266 (12%)
 Frame = +1

Query: 82   YVNDSLACFTLFKSSMENILDTKL---------EFQCGDGAFELVKLVFLLGFFCPNLHQ 234
            Y ++    F  F+S +E + D K+         E+Q  +  F  + +  L+   CP+ HQ
Sbjct: 401  YKSEVFQKFHEFQSLVERLFDRKILAVQTDWGGEYQRLNTFFNKIGISHLVS--CPHAHQ 458

Query: 235  QNGAAERKHRQITEMGNTLLFNASMPKSFWFDAFLSAAYLINMTPTKLLNYQCPFEVLFS 414
            QNG+AERKHR I E+G +LL +ASMP  FW +AFL+AAYLIN TPTK+LN   PFE LF 
Sbjct: 459  QNGSAERKHRHIVEVGLSLLAHASMPLKFWDEAFLAAAYLINRTPTKILNLDTPFERLFH 518

Query: 415  NSPDYSFLKVFGCLCFPNLAAYRKDKLSPKSTICVFIGYSPFHKGYRCFDFKTHRVYTTT 594
              PDYS L++FGC+C+PNL  Y   KL  +S  CVF+GYS  HKG++C D  T RVY + 
Sbjct: 519  KQPDYSVLRIFGCVCWPNLRPYNSHKLQFRSKQCVFLGYSSLHKGFKCLDVSTGRVYVSR 578

Query: 595  HVIFNETVFPF------AGKAISSPI----------SAVHSGVDDQSSILNDKSTD---- 714
             V F+E  FPF      AG  + S I          +  +SGVD       D STD    
Sbjct: 579  DVTFDENFFPFASLHSNAGARLRSEIQLLSPDLLNPATFNSGVDSLIDHAADMSTDPNQI 638

Query: 715  ISTSAIQPATEH-----VTVPASPTT 777
               +++Q   EH     V  P+ P T
Sbjct: 639  SGDNSVQDQAEHTPNMDVLAPSVPNT 664


>AAL66754.1 putative copia-like retrotransposon Hopscotch polyprotein [Zea mays]
          Length = 1313

 Score =  189 bits (479), Expect = 5e-51
 Identities = 111/266 (41%), Positives = 147/266 (55%), Gaps = 34/266 (12%)
 Frame = +1

Query: 82   YVNDSLACFTLFKSSMENILDTKL---------EFQCGDGAFELVKLVFLLGFFCPNLHQ 234
            Y ++    F  F+S +E + D K+         E+Q  +  F  + +  L+   CP+ HQ
Sbjct: 401  YKSEVFQKFHEFQSLVERLFDRKILAVQTDWGGEYQRLNTFFNKIGISHLVS--CPHAHQ 458

Query: 235  QNGAAERKHRQITEMGNTLLFNASMPKSFWFDAFLSAAYLINMTPTKLLNYQCPFEVLFS 414
            QNG+AERKHR I E+G +LL +ASMP  FW +AFL+AAYLIN TPTK+LN   PFE LF 
Sbjct: 459  QNGSAERKHRHIVEVGLSLLAHASMPLKFWDEAFLAAAYLINRTPTKILNLDTPFERLFH 518

Query: 415  NSPDYSFLKVFGCLCFPNLAAYRKDKLSPKSTICVFIGYSPFHKGYRCFDFKTHRVYTTT 594
              PDYS L++FGC+C+PNL  Y   KL  +S  CVF+GYS  HKG++C D  T RVY + 
Sbjct: 519  KQPDYSVLRIFGCVCWPNLRPYNSHKLQFRSKQCVFLGYSSLHKGFKCLDVSTGRVYVSR 578

Query: 595  HVIFNETVFPF------AGKAISSPI----------SAVHSGVDDQSSILNDKSTD---- 714
             V F+E  FPF      AG  + S I          +  +SGVD       D STD    
Sbjct: 579  DVTFDENFFPFASLHSNAGARLRSEIQLLSPDLLNPATFNSGVDSLIDHAADMSTDPNQI 638

Query: 715  ISTSAIQPATEH-----VTVPASPTT 777
               +++Q   EH     V  P+ P T
Sbjct: 639  SGDNSVQDQAEHTPNMDVLAPSVPNT 664


>OMO62984.1 Integrase, catalytic core [Corchorus capsularis]
          Length = 989

 Score =  186 bits (471), Expect = 5e-50
 Identities = 92/166 (55%), Positives = 113/166 (68%), Gaps = 9/166 (5%)
 Frame = +1

Query: 88  NDSLACFTLFKSSMENILDTKLEFQCGDGAFELVKLVFL---------LGFFCPNLHQQN 240
           +DSLACF  FKS +EN    K++F   DGA ELV+ VF          L   CP+ H+QN
Sbjct: 198 SDSLACFQTFKSMVENQFGHKIKFFQCDGAKELVEGVFKQFLDGHGISLRISCPHTHEQN 257

Query: 241 GAAERKHRQITEMGNTLLFNASMPKSFWFDAFLSAAYLINMTPTKLLNYQCPFEVLFSNS 420
           G  ERKHR I EMG T+LF AS+P+S W +A+ +A YLIN  PT +L+   PFE+LFS +
Sbjct: 258 GLPERKHRHIVEMGLTMLFQASLPRSLWLEAYSTAVYLINCLPTPILHGCSPFEILFSAT 317

Query: 421 PDYSFLKVFGCLCFPNLAAYRKDKLSPKSTICVFIGYSPFHKGYRC 558
           P+Y  L+VFGC C+P L  YRKDKLSPKS  CVF+GYS  HKGYRC
Sbjct: 318 PEYKHLRVFGCACYPYLVPYRKDKLSPKSKRCVFLGYSSLHKGYRC 363


>AAL78658.1 Hopscotch polyprotein, partial [Fagus sylvatica]
          Length = 226

 Score =  172 bits (436), Expect = 7e-50
 Identities = 88/189 (46%), Positives = 113/189 (59%), Gaps = 9/189 (4%)
 Frame = +1

Query: 88  NDSLACFTLFKSSMENILDTKLE-FQC-GDGAFELVKLVFLLGFF-------CPNLHQQN 240
           +D    F  F+  +EN  + K++ FQC G G F L   +  L          CP   +QN
Sbjct: 32  SDFFNTFLTFQRMVENQFERKIQIFQCDGGGEFSLQAFLTHLNMCGIVQHVSCPGTPEQN 91

Query: 241 GAAERKHRQITEMGNTLLFNASMPKSFWFDAFLSAAYLINMTPTKLLNYQCPFEVLFSNS 420
           G AERKHR I E G T+LF+A +PK+ W +AF++A YLIN  P+  L +  PF  L    
Sbjct: 92  GVAERKHRHIVETGLTMLFHARLPKNLWIEAFMTAVYLINRLPSSKLAHDTPFFKLHGVH 151

Query: 421 PDYSFLKVFGCLCFPNLAAYRKDKLSPKSTICVFIGYSPFHKGYRCFDFKTHRVYTTTHV 600
           PDY+ LKVFGC CFP L  Y K+K  PKS  C+FIGYSP HKGYRC    T RVY + HV
Sbjct: 152 PDYNSLKVFGCRCFPYLRDYAKNKFEPKSYPCIFIGYSPLHKGYRCLHPPTKRVYLSRHV 211

Query: 601 IFNETVFPF 627
           +F+E + P+
Sbjct: 212 VFDEGILPY 220


>CAN74381.1 hypothetical protein VITISV_007944 [Vitis vinifera]
          Length = 1884

 Score =  184 bits (466), Expect = 3e-49
 Identities = 96/214 (44%), Positives = 120/214 (56%), Gaps = 14/214 (6%)
 Frame = +1

Query: 88   NDSLACFTLFKSSMENILDTKLEFQCGDGAFELVKLVF---------LLGFFCPNLHQQN 240
            +D   CF  F+  +EN L+ +++    DG  E   + F         L    CP   +QN
Sbjct: 504  SDFFECFLKFQILVENQLERRIKIFQSDGGGEFQSIKFQNHLSKCGILQQVSCPGTPEQN 563

Query: 241  GAAERKHRQITEMGNTLLFNASMPKSFWFDAFLSAAYLINMTPTKLLNYQCPFEVLFSNS 420
            G AERKHR I EMG T+LFNA +P S W DAFL+A YLIN  P+ +L  + PF +LF   
Sbjct: 564  GVAERKHRHIVEMGLTMLFNAKLPLSLWVDAFLTAVYLINRLPSTVLKMESPFFMLFKQY 623

Query: 421  PDYSFLKVFGCLCFPNLAAYRKDKLSPKSTICVFIGYSPFHKGYRCFDFKTHRVYTTTHV 600
            P+Y  L++FGC CFP L  Y K+K SPK+  CVFIGYS  HKGYRC    T RVY + HV
Sbjct: 624  PEYRSLRIFGCQCFPYLRDYGKNKFSPKTYPCVFIGYSSLHKGYRCLHPSTKRVYISRHV 683

Query: 601  IFNETVFPFAGKAISS-----PISAVHSGVDDQS 687
            IFNE  FP+    +       PI  V     D S
Sbjct: 684  IFNENCFPYDNSLVKENHLQIPIEMVSFSTSDAS 717


>XP_019447442.1 PREDICTED: uncharacterized protein LOC109348071 [Lupinus
            angustifolius]
          Length = 944

 Score =  174 bits (442), Expect = 4e-46
 Identities = 86/181 (47%), Positives = 116/181 (64%), Gaps = 3/181 (1%)
 Frame = +1

Query: 217  CPNLHQQNGAAERKHRQITEMGNTLLFNASMPKSFWFDAFLSAAYLINMTPTKLLNYQCP 396
            CP+ H Q G  ERKHR I E G TLL +A +P ++W  AF++A +LIN  PT  L +  P
Sbjct: 747  CPHTHHQQGTVERKHRHIVETGLTLLTHAQLPMNYWDHAFITAVFLINRLPTITLQHNSP 806

Query: 397  FEVLFSNSPDYSFLKVFGCLCFPNLAAYRKDKLSPKSTICVFIGYSPFHKGYRCFDFKTH 576
            +++LF +SPDY+FLKVFGC CFP L  Y K KL P+S+ C F+GYS  HKGY+C   K  
Sbjct: 807  YQLLFGHSPDYNFLKVFGCACFPLLRPYNKHKLDPRSSECTFLGYSLNHKGYKCLS-KDG 865

Query: 577  RVYTTTHVIFNETVFPFAGKAISSPISAVHSGVDDQSSILNDK---STDISTSAIQPATE 747
            ++Y +  VIFNE+ FPFA  + SS    +H+ V + S I ++    ST  +TS I  +T 
Sbjct: 866  KIYISKDVIFNESKFPFANSSHSSDSKPLHTNVSNPSVICHNSPLYSTVPTTSPIHHSTP 925

Query: 748  H 750
            H
Sbjct: 926  H 926


>CAN68489.1 hypothetical protein VITISV_037543 [Vitis vinifera]
          Length = 1449

 Score =  174 bits (442), Expect = 5e-46
 Identities = 88/187 (47%), Positives = 116/187 (62%), Gaps = 7/187 (3%)
 Frame = +1

Query: 88   NDSLACFTLFKSSMENILDTKLEFQCGDGAFELVKLVFLLG-------FFCPNLHQQNGA 246
            + +L+ F  FKS +EN  +++++    D   E       L        F CP   +QNG 
Sbjct: 619  DQALSVFIKFKSLVENQFNSRIQCLRSDNGGEFKAFSSYLATHGIKSQFSCPYTPEQNGR 678

Query: 247  AERKHRQITEMGNTLLFNASMPKSFWFDAFLSAAYLINMTPTKLLNYQCPFEVLFSNSPD 426
            AERK R I E G  LL  AS+P  FW  AF +A +LIN  PTK+LNYQ PF++LF  SP+
Sbjct: 679  AERKLRHIIETGLALLATASLPFKFWLYAFHTAIFLINRLPTKVLNYQSPFQILFGKSPN 738

Query: 427  YSFLKVFGCLCFPNLAAYRKDKLSPKSTICVFIGYSPFHKGYRCFDFKTHRVYTTTHVIF 606
            Y   K+FGCLC+P +  Y K+KLS +S+ CVF+GYS  HKGY C +  T R+Y T HV+F
Sbjct: 739  YHIFKIFGCLCYPYIRPYNKNKLSYRSSQCVFLGYSSNHKGYMCLNPLTGRLYVTRHVVF 798

Query: 607  NETVFPF 627
            +ETVFPF
Sbjct: 799  HETVFPF 805


>XP_017635962.1 PREDICTED: uncharacterized protein LOC108478037 [Gossypium arboreum]
          Length = 875

 Score =  173 bits (439), Expect = 8e-46
 Identities = 100/236 (42%), Positives = 135/236 (57%), Gaps = 7/236 (2%)
 Frame = +1

Query: 88   NDSLACFTLFKSSMENILDTKLEFQCGD--GAFELVKLVF-----LLGFFCPNLHQQNGA 246
            ++ L  FT F   +E  L  KL+    D  G F+++KL       +  F CP    QNG 
Sbjct: 640  SEVLTAFTQFHRQVERTLGCKLQTLQTDRGGEFQVLKLYLAQHGIVHRFACPYTFAQNGI 699

Query: 247  AERKHRQITEMGNTLLFNASMPKSFWFDAFLSAAYLINMTPTKLLNYQCPFEVLFSNSPD 426
             ERKHRQI E G ++L +A+MP S+W D F SA + IN  P+  L++  P+E LF   P+
Sbjct: 700  VERKHRQIVEAGLSMLAHAAMPLSYWNDVFSSAVFFINRLPSHPLDHVSPYEKLFQVPPN 759

Query: 427  YSFLKVFGCLCFPNLAAYRKDKLSPKSTICVFIGYSPFHKGYRCFDFKTHRVYTTTHVIF 606
            YSFL VFGC+CFPNL  Y   KL  +ST+C F+GYSP HKGY+C D  + +VY + HV F
Sbjct: 760  YSFLCVFGCMCFPNLRPYNSHKLQFRSTLCTFLGYSPLHKGYQCQD-SSGQVYVSRHVTF 818

Query: 607  NETVFPFAGKAISSPISAVHSGVDDQSSILNDKSTDISTSAIQPATEHVTVPASPT 774
            NETVFPF  K ++S +          S +L   S   S S  +P T    +P+ P+
Sbjct: 819  NETVFPF--KTVTSKLVTQSPPSQTSSRLLVLSSN--SPSNTRPPTVPSYLPSMPS 870


>CAN61640.1 hypothetical protein VITISV_021909 [Vitis vinifera]
          Length = 1361

 Score =  174 bits (440), Expect = 9e-46
 Identities = 85/175 (48%), Positives = 111/175 (63%)
 Frame = +1

Query: 217  CPNLHQQNGAAERKHRQITEMGNTLLFNASMPKSFWFDAFLSAAYLINMTPTKLLNYQCP 396
            CP    QNG  ERKHR +TE+G TL+F+A +P S W +AF +A +LIN  P   L  + P
Sbjct: 570  CPYTPSQNGIVERKHRYVTEIGLTLMFHARVPLSLWDEAFSTAVFLINRLPPPSLAGKTP 629

Query: 397  FEVLFSNSPDYSFLKVFGCLCFPNLAAYRKDKLSPKSTICVFIGYSPFHKGYRCFDFKTH 576
            +E+LF   PDYS L+ FGCLCFP L  Y  +KLSPKST CVF+GYS  HKG+RC D KTH
Sbjct: 630  YELLFGKQPDYSMLRTFGCLCFPYLRDYSPNKLSPKSTPCVFLGYSTLHKGFRCLDRKTH 689

Query: 577  RVYTTTHVIFNETVFPFAGKAISSPISAVHSGVDDQSSILNDKSTDISTSAIQPA 741
            RVY + HV F E  FP+ G ++ +  S +      +S      S+++STS   P+
Sbjct: 690  RVYVSRHVQFYEHTFPYNGDSVQNLPSNIDYIHFSESQECVSSSSNVSTSDSLPS 744


>AAU43956.1 unknown protein [Oryza sativa Japonica Group] AAU44069.1 putative
            polyprotein [Oryza sativa Japonica Group]
          Length = 1447

 Score =  174 bits (440), Expect = 9e-46
 Identities = 95/208 (45%), Positives = 126/208 (60%), Gaps = 11/208 (5%)
 Frame = +1

Query: 40   FAGDY*CL*FNYIV-YVNDSLACFTLFKSSMENILDTKLEFQCGDGAFELVKLVFLLGFF 216
            F GDY    + Y++ + ++ +  F  F++ +E + + K+     D   E  KL     FF
Sbjct: 539  FIGDYSKFTWLYLIKHKSEVIQKFHEFQALVERLFNRKIIAMQSDWGGEYEKLH---SFF 595

Query: 217  ----------CPNLHQQNGAAERKHRQITEMGNTLLFNASMPKSFWFDAFLSAAYLINMT 366
                      CP+ HQQNG+AERKHR I E+G TLL  +SMP  FW +AF +A YLIN T
Sbjct: 596  TKIGITHHVSCPHTHQQNGSAERKHRHIVEVGLTLLAYSSMPLKFWDEAFQAAVYLINRT 655

Query: 367  PTKLLNYQCPFEVLFSNSPDYSFLKVFGCLCFPNLAAYRKDKLSPKSTICVFIGYSPFHK 546
            PTKLL +  P E LF+ +PDYS L+VFGC C+P+L  Y   KL  +S  C F+GYS  HK
Sbjct: 656  PTKLLQFLTPLEHLFNQTPDYSSLRVFGCACWPHLRPYNTHKLQFRSKQCTFLGYSTLHK 715

Query: 547  GYRCFDFKTHRVYTTTHVIFNETVFPFA 630
            G++C D  T RVY +  VIF+ET FPFA
Sbjct: 716  GFKCLDPSTGRVYISRDVIFDETNFPFA 743


>AAC61290.1 putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1149

 Score =  172 bits (437), Expect = 2e-45
 Identities = 87/197 (44%), Positives = 121/197 (61%), Gaps = 10/197 (5%)
 Frame = +1

Query: 67   FNYIVYVNDSLACFTLFKSSMENILDTKLEFQCGDGAFELVKLVFLLGF---------FC 219
            F  + + +D  + F  F+S +EN+L TK+     DG  E     FL             C
Sbjct: 539  FYPLKHKSDFCSLFMKFQSFVENLLQTKIGTFQSDGGGEFTSNRFLQHLQESGIQHYISC 598

Query: 220  PNLHQQNGAAERKHRQITEMGNTLLFNASMPKSFWFDAFLSAAYLINMTPTKLLNYQC-P 396
            P+  QQNG AERKHRQ+TE G TL+F +  P+ FW +AF +A +L N+ PT  L+    P
Sbjct: 599  PHTPQQNGLAERKHRQLTERGLTLMFQSKAPQRFWVEAFFTANFLSNLLPTSALDSSTTP 658

Query: 397  FEVLFSNSPDYSFLKVFGCLCFPNLAAYRKDKLSPKSTICVFIGYSPFHKGYRCFDFKTH 576
            ++VLF  +PDYS L+ FGC CFP L AY ++K  P+S  C+F+GY+  +KGYRCF   T+
Sbjct: 659  YQVLFGKAPDYSALRTFGCACFPTLRAYARNKFDPRSLKCIFLGYTEKYKGYRCFFPPTN 718

Query: 577  RVYTTTHVIFNETVFPF 627
            RVY + HV+F+E+ FPF
Sbjct: 719  RVYLSRHVLFDESSFPF 735


>AAN06870.1 Putative gag-pol polyprotein [Oryza sativa Japonica Group]
           ABF94109.1 retrotransposon protein, putative, Ty1-copia
           subclass [Oryza sativa Japonica Group]
          Length = 1247

 Score =  172 bits (437), Expect = 2e-45
 Identities = 80/138 (57%), Positives = 97/138 (70%)
 Frame = +1

Query: 217 CPNLHQQNGAAERKHRQITEMGNTLLFNASMPKSFWFDAFLSAAYLINMTPTKLLNYQCP 396
           CP+ HQQNG+AERKHR I EMG  LL  +SMP  FW +AF SA YLIN TP++LL Y  P
Sbjct: 404 CPHTHQQNGSAERKHRHIVEMGLALLAYSSMPLKFWDEAFTSAVYLINRTPSRLLKYATP 463

Query: 397 FEVLFSNSPDYSFLKVFGCLCFPNLAAYRKDKLSPKSTICVFIGYSPFHKGYRCFDFKTH 576
            E LF  +PDY+ L+VFGC C+P+L  Y   KL  +S  C F+GYSP HKG++C D  T 
Sbjct: 464 LERLFKQTPDYNLLRVFGCACWPHLRPYNARKLQFRSKQCTFLGYSPLHKGFKCLDPSTG 523

Query: 577 RVYTTTHVIFNETVFPFA 630
           RVY +  VIF+E VFPFA
Sbjct: 524 RVYISHDVIFDENVFPFA 541


>ABA97707.2 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1001

 Score =  172 bits (435), Expect = 4e-45
 Identities = 91/196 (46%), Positives = 116/196 (59%), Gaps = 10/196 (5%)
 Frame = +1

Query: 73  YIVYVNDSLACFTLFKSSMENILDTKLEFQCGDGAFELVKLVFLLGFF----------CP 222
           ++ Y ++ L  F  F S +E +LD K+     D   E  KL     FF          CP
Sbjct: 290 FLKYKSEVLQKFQEFLSFVERLLDRKIIAMQTDWGGEYEKLN---SFFTKIGISHRVSCP 346

Query: 223 NLHQQNGAAERKHRQITEMGNTLLFNASMPKSFWFDAFLSAAYLINMTPTKLLNYQCPFE 402
           + HQQNGAAERKHR I E+G  LL +ASMP  FW +AF +A YLIN TP K +N+  P E
Sbjct: 347 HAHQQNGAAERKHRHIVEVGLALLAHASMPLKFWDEAFCTATYLINRTPAKTINFDTPLE 406

Query: 403 VLFSNSPDYSFLKVFGCLCFPNLAAYRKDKLSPKSTICVFIGYSPFHKGYRCFDFKTHRV 582
            LF   P+Y+ L+ FGC C+PNL  Y   KL  +ST CVF+GYS  +KG++C    T R+
Sbjct: 407 RLFHQKPEYASLRTFGCACWPNLRPYNSKKLVFRSTQCVFLGYSRLYKGFKCLHVSTGRI 466

Query: 583 YTTTHVIFNETVFPFA 630
           Y +  VIF E VFPFA
Sbjct: 467 YISRDVIFYENVFPFA 482


>OMO94717.1 Integrase, catalytic core [Corchorus capsularis]
          Length = 1198

 Score =  172 bits (435), Expect = 4e-45
 Identities = 90/196 (45%), Positives = 117/196 (59%), Gaps = 7/196 (3%)
 Frame = +1

Query: 88   NDSLACFTLFKSSMENILDTKLEFQCGDGAFELVKLVFLLGFFCPN-----LH--QQNGA 246
            +D    F  FK  +E     K++    DG  E   L  LL     N     LH  + NG 
Sbjct: 414  SDLFLLFPKFKVMVEAYFQLKIQTIYSDGGGEYEHLKQLLQTHGINHLQTPLHIPEHNGI 473

Query: 247  AERKHRQITEMGNTLLFNASMPKSFWFDAFLSAAYLINMTPTKLLNYQCPFEVLFSNSPD 426
            +ERKHR I E GNTLL +A++PK+FW  AF +  +LIN  PT LL  + PFE+LF   P+
Sbjct: 474  SERKHRHIVETGNTLLHHANLPKTFWSFAFQTVVFLINRMPTPLLGNKSPFEILFQKQPN 533

Query: 427  YSFLKVFGCLCFPNLAAYRKDKLSPKSTICVFIGYSPFHKGYRCFDFKTHRVYTTTHVIF 606
            Y+ LK+FGCLCFP L  Y K KL PKS  C+FIGYSP    YRC+D    +++T+ HVIF
Sbjct: 534  YNKLKIFGCLCFPWLKPYTKSKLEPKSKPCMFIGYSPNQSAYRCYDLTDQKIFTSRHVIF 593

Query: 607  NETVFPFAGKAISSPI 654
            +E VFPF   ++SS +
Sbjct: 594  HEAVFPFQLNSVSSSL 609


>OMO73140.1 Integrase, catalytic core [Corchorus capsularis]
          Length = 1398

 Score =  172 bits (435), Expect = 4e-45
 Identities = 95/241 (39%), Positives = 129/241 (53%), Gaps = 27/241 (11%)
 Frame = +1

Query: 88   NDSLACFTLFKSSMENILDTKLE--FQCGDGAFELVKLVFLLGFFC-----PNLHQQNGA 246
            +D  A F  FK+ +E    T ++  +  G G +E +K              P+  + NG 
Sbjct: 540  SDLSALFPKFKAMVEQYFQTHIQTIYSDGGGEYEHLKQTLQNHGITHLQTPPHTPEHNGI 599

Query: 247  AERKHRQITEMGNTLLFNASMPKSFWFDAFLSAAYLINMTPTKLLNYQCPFEVLFSNSPD 426
            +ERKHR I E G TLL  A +P +FW  A+ +A YLIN  PT  L ++ PFEVLF   P+
Sbjct: 600  SERKHRHIVETGKTLLHQAHLPNTFWTFAYQTAVYLINRMPTPTLAHKSPFEVLFQKQPN 659

Query: 427  YSFLKVFGCLCFPNLAAYRKDKLSPKSTICVFIGYSPFHKGYRCFDFKTHRVYTTTHVIF 606
            YS LK+FGCLCFP L  Y   KL PKS  CVFIGYS     Y+C+DF TH++YT+ HV+F
Sbjct: 660  YSKLKIFGCLCFPWLKPYATSKLEPKSRSCVFIGYSTHQSAYKCYDFVTHKIYTSRHVVF 719

Query: 607  NETVFPF----------AGKAISSPISAVHS----------GVDDQSSILNDKSTDISTS 726
            +E  FPF              +S+P S +H               Q S +++ S  +STS
Sbjct: 720  SEKDFPFHSNTTSSSTTPSSMVSTPTSTLHKILPSSYTPSLAAIPQRSAISNSSPSLSTS 779

Query: 727  A 729
            +
Sbjct: 780  S 780


>OMO62875.1 hypothetical protein CCACVL1_22594 [Corchorus capsularis]
          Length = 1716

 Score =  172 bits (435), Expect = 4e-45
 Identities = 83/186 (44%), Positives = 120/186 (64%)
 Frame = +1

Query: 217  CPNLHQQNGAAERKHRQITEMGNTLLFNASMPKSFWFDAFLSAAYLINMTPTKLLNYQCP 396
            CP+  +QNG AERKHR I E G  L+++A +P ++W  AF +A Y+IN  PT  LN++ P
Sbjct: 673  CPHTPEQNGCAERKHRHIVETGLALMYHAGVPLTYWAYAFDAAVYIINRLPTPRLNHKSP 732

Query: 397  FEVLFSNSPDYSFLKVFGCLCFPNLAAYRKDKLSPKSTICVFIGYSPFHKGYRCFDFKTH 576
            FE +F   P Y+ L+ FGCLC+P L  Y ++KLSP+ST CVF+GYS  HKGYRC DF+T 
Sbjct: 733  FETIFHEKPKYNTLRTFGCLCYPWLRPYAQNKLSPQSTKCVFLGYSKLHKGYRCLDFETG 792

Query: 577  RVYTTTHVIFNETVFPFAGKAISSPISAVHSGVDDQSSILNDKSTDISTSAIQPATEHVT 756
            +++ + HV+F+E VFPF    +S+   A +    +  S L+   T+ +T ++  +T   T
Sbjct: 793  KIHISRHVLFDEQVFPF---QVSNGQEAPNVASPNYLSPLSISRTENNTFSLPKSTPKTT 849

Query: 757  VPASPT 774
               SPT
Sbjct: 850  PINSPT 855


>AAT85031.1 putative polyprotein [Oryza sativa Japonica Group] ABF96679.1
            retrotransposon protein, putative, Ty1-copia subclass
            [Oryza sativa Japonica Group]
          Length = 1437

 Score =  171 bits (434), Expect = 6e-45
 Identities = 102/267 (38%), Positives = 146/267 (54%), Gaps = 22/267 (8%)
 Frame = +1

Query: 40   FAGDY*CL*FNYIV-YVNDSLACFTLFKSSMENILDTKLEFQCGDGAFELVKLVFLLG-- 210
            F  DY    + Y++ Y ++    F  F+S +E + + K+     D   E  KL       
Sbjct: 537  FIDDYSKFTWIYLLKYKSEVFDKFHEFQSLVERLFNRKIVAMQTDWGGEYQKLHSFFNKV 596

Query: 211  -----FFCPNLHQQNGAAERKHRQITEMGNTLLFNASMPKSFWFDAFLSAAYLINMTPTK 375
                   CP+ HQQNG+AERKHR I E+G  LL  +SMP  FW +AFLSA YLIN TP++
Sbjct: 597  GITHHVSCPHTHQQNGSAERKHRHIVEVGLALLAYSSMPLKFWGEAFLSAVYLINRTPSR 656

Query: 376  LLNYQCPFEVLFSNSPDYSFLKVFGCLCFPNLAAYRKDKLSPKSTICVFIGYSPFHKGYR 555
            +L+   P E L  + PDY+ L+VFGC C+PNL  Y K KL  +ST C F+GYS  HKG++
Sbjct: 657  VLHDVSPLERLLGHKPDYNALRVFGCACWPNLRPYNKHKLQFRSTTCTFLGYSTLHKGFK 716

Query: 556  CFDFKTHRVYTTTHVIFNETVFPF------AGKAISSPISAVHS-------GVDDQSSIL 696
            C D  T RVY +  V+F+ET FPF       G  + + I+ V         G+   SS++
Sbjct: 717  CLDPSTGRVYISRDVVFDETQFPFTKLHPNVGAKLRAEIALVPELAASLPRGLQQISSVI 776

Query: 697  N-DKSTDISTSAIQPATEHVTVPASPT 774
            N  ++ ++S   +Q  + +   P + T
Sbjct: 777  NTPENANVSNENMQQDSTYDNEPETET 803


>OMO61427.1 Zinc finger, CCCH-type [Corchorus capsularis]
          Length = 1996

 Score =  171 bits (434), Expect = 6e-45
 Identities = 88/189 (46%), Positives = 123/189 (65%), Gaps = 9/189 (4%)
 Frame = +1

Query: 88   NDSLACFTLFKSSMENILDTKLE-FQCGDGA-FELVKLV-FL------LGFFCPNLHQQN 240
            +D   CF  F + +EN    K++ FQC +G  F   + V FL      L + CP   +QN
Sbjct: 531  SDFFQCFLNFHAYVENQFGKKIKVFQCDEGGEFTDGRFVQFLQNNGIKLQYACPKTPEQN 590

Query: 241  GAAERKHRQITEMGNTLLFNASMPKSFWFDAFLSAAYLINMTPTKLLNYQCPFEVLFSNS 420
            G  ERKHR I E+G TLLF++  PK +W +AF +A +LIN  P+++L+++ PFE+L++ S
Sbjct: 591  GLVERKHRNIVELGLTLLFHSHTPKRYWVEAFGTAIWLINRQPSRVLDWKSPFELLYNKS 650

Query: 421  PDYSFLKVFGCLCFPNLAAYRKDKLSPKSTICVFIGYSPFHKGYRCFDFKTHRVYTTTHV 600
            PDYS L+VFG  CFP L ++ K+KL P+S  C+F+GYS  HKGYRC    + RVY + HV
Sbjct: 651  PDYSCLRVFGSKCFPFLRSHSKNKLEPRSLPCIFLGYSELHKGYRCLHPPSGRVYISRHV 710

Query: 601  IFNETVFPF 627
             F+E VFPF
Sbjct: 711  TFDEKVFPF 719


>AAU90262.1 integrase core domain containing protein [Oryza sativa Japonica
            Group] ABF97857.1 retrotransposon protein, putative,
            Ty1-copia subclass, expressed [Oryza sativa Japonica
            Group]
          Length = 1021

 Score =  170 bits (431), Expect = 1e-44
 Identities = 85/188 (45%), Positives = 119/188 (63%), Gaps = 7/188 (3%)
 Frame = +1

Query: 88   NDSLACFTLFKSSMENILDTKLEFQCGD--GAFELVKLVFL-LGFF----CPNLHQQNGA 246
            ++ L  F+ F+  +E + + K+     D  G +E +  +F  +G      CP  HQQNG+
Sbjct: 471  SEVLQKFSEFQQLVERLFNRKIIAMQSDWGGEYEKLNAIFTKIGITHHVSCPYAHQQNGS 530

Query: 247  AERKHRQITEMGNTLLFNASMPKSFWFDAFLSAAYLINMTPTKLLNYQCPFEVLFSNSPD 426
            AERKHR I E+G +LL +ASMP  FW +AFL+A YLIN TP+K++ Y  P E L +  P+
Sbjct: 531  AERKHRHIVEVGLSLLAHASMPLKFWDEAFLTATYLINRTPSKVIQYSTPLERLLNQKPN 590

Query: 427  YSFLKVFGCLCFPNLAAYRKDKLSPKSTICVFIGYSPFHKGYRCFDFKTHRVYTTTHVIF 606
            YS L+ FGC C+PNL  Y   KL  +S  CVF+GYS  HKG++C D  T RVY +  V+F
Sbjct: 591  YSSLRTFGCACWPNLRPYNNRKLQFRSKQCVFLGYSNIHKGFKCLDVATGRVYISRDVVF 650

Query: 607  NETVFPFA 630
            +E +FPF+
Sbjct: 651  DENIFPFS 658


>KYP47921.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 330

 Score =  162 bits (409), Expect = 1e-44
 Identities = 96/237 (40%), Positives = 128/237 (54%), Gaps = 7/237 (2%)
 Frame = +1

Query: 88  NDSLACFTLFKSSMENILDTKLEFQCGDGAFELVKLVFLLG-------FFCPNLHQQNGA 246
           + +L CF  FK+ +EN LD K++    DG  E +     L          CP +H+QNG 
Sbjct: 83  SQALTCFIHFKNMIENQLDHKIKCIQTDGGKEYIAFTKFLQEHGILHHISCPYIHEQNGN 142

Query: 247 AERKHRQITEMGNTLLFNASMPKSFWFDAFLSAAYLINMTPTKLLNYQCPFEVLFSNSPD 426
           AERKH  IT+MG ++L +ASMP  +W +AF +  ++IN  PT  L +    E LFS SP 
Sbjct: 143 AERKHTHITKMGLSILAHASMPLKYWGEAFNTVVHIINRLPTPTLAFSTLIEKLFSKSPS 202

Query: 427 YSFLKVFGCLCFPNLAAYRKDKLSPKSTICVFIGYSPFHKGYRCFDFKTHRVYTTTHVIF 606
           Y+ LKVFG  C+P L  Y K+K   K++ CVF+GY+  +KGY C    T R+Y + HVIF
Sbjct: 203 YNDLKVFGSTCYPFLRPYNKNKFDFKTSECVFLGYNSSYKGYMCLS-STGRIYISRHVIF 261

Query: 607 NETVFPFAGKAISSPISAVHSGVDDQSSILNDKSTDISTSAIQPATEHVTVPASPTT 777
           NE VFPFA     S +  V S      S+ +D    IS  A       VT    P T
Sbjct: 262 NEFVFPFA-----SNLDFVKSSTLIAPSLSHDSLPYISLIAENNPAHIVTQNPEPPT 313