BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver32_contig00043559
         (438 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

YP_009234972.1 RNA polymerase beta'' subunit (chloroplast) [Papa...   298   2e-91
ABD93850.1 RNA polymerase beta chain, partial (chloroplast) [San...   279   1e-86
ABD93729.1 RNA polymerase beta chain, partial (chloroplast) [Eup...   278   1e-86
ABD93728.1 RNA polymerase beta chain, partial (chloroplast) [Ake...   275   4e-85
YP_009234545.1 RNA polymerase beta'' subunit (chloroplast) [Eupt...   278   4e-84
YP_009309951.1 RNA polymerase beta'' subunit (chloroplast) [Core...   277   8e-84
YP_009234376.1 RNA polymerase beta'' subunit (chloroplast) [Akeb...   275   4e-83
APY18813.1 RNA polymerase beta'' subunit (chloroplast) [Akebia q...   274   7e-83
ABD93771.1 RNA polymerase beta chain, partial (chloroplast) [Lar...   267   3e-82
ABD93860.1 RNA polymerase beta chain, partial (chloroplast) [Peu...   264   8e-82
ABD93725.1 RNA polymerase beta chain, partial (chloroplast) [Xan...   266   8e-82
ABD93759.1 RNA polymerase beta chain, partial (chloroplast) [Ile...   265   3e-81
ABD93723.1 RNA polymerase beta chain, partial (chloroplast) [Nel...   264   5e-81
ABD93747.1 RNA polymerase beta chain, partial (chloroplast) [Lir...   263   6e-81
ABD93854.1 RNA polymerase beta chain, partial (chloroplast) [Cin...   261   9e-81
ABD93843.1 RNA polymerase beta chain, partial (chloroplast) [Per...   263   1e-80
YP_740640.1 RNA polymerase beta'' subunit [Nandina domestica] Q0...   268   1e-80
ABD93852.1 RNA polymerase beta chain, partial (chloroplast) [Deg...   261   2e-80
ABQ15077.1 RNA polymerase beta' subunit, partial (chloroplast) [...   261   3e-80
ABD93767.1 RNA polymerase beta chain, partial (chloroplast) [Ber...   261   4e-80

>YP_009234972.1 RNA polymerase beta'' subunit (chloroplast) [Papaver somniferum]
            AMD08690.1 RNA polymerase beta'' subunit (chloroplast)
            [Papaver somniferum]
          Length = 1387

 Score =  298 bits (763), Expect = 2e-91
 Identities = 145/145 (100%), Positives = 145/145 (100%)
 Frame = -3

Query: 436  RVERKKKRIELKIFSGDIHFPGETDKISWHSGILIPPGTGKKNAGDSKKLKNWIYVQRIT 257
            RVERKKKRIELKIFSGDIHFPGETDKISWHSGILIPPGTGKKNAGDSKKLKNWIYVQRIT
Sbjct: 706  RVERKKKRIELKIFSGDIHFPGETDKISWHSGILIPPGTGKKNAGDSKKLKNWIYVQRIT 765

Query: 256  PIKKKFFVLVRPVVTYEIADGINLATLFPHDLLQERDNVQLRVVNYILYGNGKPIRGIYH 77
            PIKKKFFVLVRPVVTYEIADGINLATLFPHDLLQERDNVQLRVVNYILYGNGKPIRGIYH
Sbjct: 766  PIKKKFFVLVRPVVTYEIADGINLATLFPHDLLQERDNVQLRVVNYILYGNGKPIRGIYH 825

Query: 76   TSIQLVRTCLVLNWNQEKKGSSIEE 2
            TSIQLVRTCLVLNWNQEKKGSSIEE
Sbjct: 826  TSIQLVRTCLVLNWNQEKKGSSIEE 850


>ABD93850.1 RNA polymerase beta chain, partial (chloroplast) [Sanguinaria
           canadensis]
          Length = 853

 Score =  279 bits (713), Expect = 1e-86
 Identities = 136/145 (93%), Positives = 142/145 (97%)
 Frame = -3

Query: 436 RVERKKKRIELKIFSGDIHFPGETDKISWHSGILIPPGTGKKNAGDSKKLKNWIYVQRIT 257
           RVE+KKK+IELKIFSGDIHFPGETDKISWHSGILIPPGTGKKNA +SKKLKN IYVQ IT
Sbjct: 257 RVEKKKKKIELKIFSGDIHFPGETDKISWHSGILIPPGTGKKNAKESKKLKNGIYVQWIT 316

Query: 256 PIKKKFFVLVRPVVTYEIADGINLATLFPHDLLQERDNVQLRVVNYILYGNGKPIRGIYH 77
           PIKKK+FVLVRPVVTYEIADGINLATLFPHDLLQERDNVQLRVVNYILYGNGKPIRGIYH
Sbjct: 317 PIKKKYFVLVRPVVTYEIADGINLATLFPHDLLQERDNVQLRVVNYILYGNGKPIRGIYH 376

Query: 76  TSIQLVRTCLVLNWNQEKKGSSIEE 2
           TSIQLVRTCLVLNW+Q+KKGSSIEE
Sbjct: 377 TSIQLVRTCLVLNWDQDKKGSSIEE 401


>ABD93729.1 RNA polymerase beta chain, partial (chloroplast) [Euptelea
           polyandra]
          Length = 796

 Score =  278 bits (710), Expect = 1e-86
 Identities = 136/145 (93%), Positives = 141/145 (97%)
 Frame = -3

Query: 436 RVERKKKRIELKIFSGDIHFPGETDKISWHSGILIPPGTGKKNAGDSKKLKNWIYVQRIT 257
           RVERKKKRIELKIFSGDIHFPGETDKIS HSGILIPPGTGKKN+ +SKKLKNWIYVQRIT
Sbjct: 261 RVERKKKRIELKIFSGDIHFPGETDKISRHSGILIPPGTGKKNSKESKKLKNWIYVQRIT 320

Query: 256 PIKKKFFVLVRPVVTYEIADGINLATLFPHDLLQERDNVQLRVVNYILYGNGKPIRGIYH 77
           PIKKK+FVLVRPVVTYEIADGINLATLFP DLLQERDNVQLRVVNYILYGNGKPIRGIYH
Sbjct: 321 PIKKKYFVLVRPVVTYEIADGINLATLFPQDLLQERDNVQLRVVNYILYGNGKPIRGIYH 380

Query: 76  TSIQLVRTCLVLNWNQEKKGSSIEE 2
           TSIQLVRTCLVLNW+Q+K GSSIEE
Sbjct: 381 TSIQLVRTCLVLNWDQDKNGSSIEE 405


>ABD93728.1 RNA polymerase beta chain, partial (chloroplast) [Akebia quinata]
          Length = 861

 Score =  275 bits (703), Expect = 4e-85
 Identities = 133/145 (91%), Positives = 139/145 (95%)
 Frame = -3

Query: 436 RVERKKKRIELKIFSGDIHFPGETDKISWHSGILIPPGTGKKNAGDSKKLKNWIYVQRIT 257
           RVERKKKR+ELKIFSGDIHFPGETDKISWHSGILIPPGTGKKN+ +SKKLKNWIYVQRIT
Sbjct: 261 RVERKKKRLELKIFSGDIHFPGETDKISWHSGILIPPGTGKKNSKESKKLKNWIYVQRIT 320

Query: 256 PIKKKFFVLVRPVVTYEIADGINLATLFPHDLLQERDNVQLRVVNYILYGNGKPIRGIYH 77
           P KKK+FVLVRPV+TYEIADGINLATLFP DLLQERDNVQLRVVNYILYGNGKPIRGI H
Sbjct: 321 PTKKKYFVLVRPVITYEIADGINLATLFPEDLLQERDNVQLRVVNYILYGNGKPIRGISH 380

Query: 76  TSIQLVRTCLVLNWNQEKKGSSIEE 2
           TSIQLVRTCLVLNW+QEK GSS EE
Sbjct: 381 TSIQLVRTCLVLNWDQEKNGSSREE 405


>YP_009234545.1 RNA polymerase beta'' subunit (chloroplast) [Euptelea pleiosperma]
            AMD08263.1 RNA polymerase beta'' subunit (chloroplast)
            [Euptelea pleiosperma]
          Length = 1385

 Score =  278 bits (710), Expect = 4e-84
 Identities = 136/145 (93%), Positives = 141/145 (97%)
 Frame = -3

Query: 436  RVERKKKRIELKIFSGDIHFPGETDKISWHSGILIPPGTGKKNAGDSKKLKNWIYVQRIT 257
            RVERKKKRIELKIFSGDIHFPGETDKIS HSGILIPPGTGKKN+ +SKKLKNWIYVQRIT
Sbjct: 706  RVERKKKRIELKIFSGDIHFPGETDKISRHSGILIPPGTGKKNSKESKKLKNWIYVQRIT 765

Query: 256  PIKKKFFVLVRPVVTYEIADGINLATLFPHDLLQERDNVQLRVVNYILYGNGKPIRGIYH 77
            PIKKK+FVLVRPVVTYEIADGINLATLFP DLLQERDNVQLRVVNYILYGNGKPIRGIYH
Sbjct: 766  PIKKKYFVLVRPVVTYEIADGINLATLFPQDLLQERDNVQLRVVNYILYGNGKPIRGIYH 825

Query: 76   TSIQLVRTCLVLNWNQEKKGSSIEE 2
            TSIQLVRTCLVLNW+Q+K GSSIEE
Sbjct: 826  TSIQLVRTCLVLNWDQDKNGSSIEE 850


>YP_009309951.1 RNA polymerase beta'' subunit (chloroplast) [Coreanomecon
            hylomeconoides] ALZ50094.1 RNA polymerase beta'' subunit
            (chloroplast) [Coreanomecon hylomeconoides]
          Length = 1384

 Score =  277 bits (708), Expect = 8e-84
 Identities = 136/145 (93%), Positives = 139/145 (95%)
 Frame = -3

Query: 436  RVERKKKRIELKIFSGDIHFPGETDKISWHSGILIPPGTGKKNAGDSKKLKNWIYVQRIT 257
            RVERKKKRIELKIFSGDIHFPGETDKISWHSGILIPPG GKKNA  SKKLKNWIYVQRIT
Sbjct: 706  RVERKKKRIELKIFSGDIHFPGETDKISWHSGILIPPGAGKKNAKKSKKLKNWIYVQRIT 765

Query: 256  PIKKKFFVLVRPVVTYEIADGINLATLFPHDLLQERDNVQLRVVNYILYGNGKPIRGIYH 77
            PIKKK+FVLVR VVTYEIADGINLATLFPHD LQERDNVQLRVVNYILYGNGKPIRGI H
Sbjct: 766  PIKKKYFVLVRSVVTYEIADGINLATLFPHDPLQERDNVQLRVVNYILYGNGKPIRGISH 825

Query: 76   TSIQLVRTCLVLNWNQEKKGSSIEE 2
            TSIQLVRTCLVLNW+Q+KKGSSIEE
Sbjct: 826  TSIQLVRTCLVLNWDQDKKGSSIEE 850


>YP_009234376.1 RNA polymerase beta'' subunit (chloroplast) [Akebia trifoliata]
            AMD08094.1 RNA polymerase beta'' subunit (chloroplast)
            [Akebia trifoliata]
          Length = 1381

 Score =  275 bits (703), Expect = 4e-83
 Identities = 133/145 (91%), Positives = 139/145 (95%)
 Frame = -3

Query: 436  RVERKKKRIELKIFSGDIHFPGETDKISWHSGILIPPGTGKKNAGDSKKLKNWIYVQRIT 257
            RVERKKKR+ELKIFSGDIHFPGETDKISWHSGILIPPGTGKKN+ +SKKLKNWIYVQRIT
Sbjct: 706  RVERKKKRLELKIFSGDIHFPGETDKISWHSGILIPPGTGKKNSKESKKLKNWIYVQRIT 765

Query: 256  PIKKKFFVLVRPVVTYEIADGINLATLFPHDLLQERDNVQLRVVNYILYGNGKPIRGIYH 77
            P KKK+FVLVRPV+TYEIADGINLATLFP DLLQERDNVQLRVVNYILYGNGKPIRGI H
Sbjct: 766  PTKKKYFVLVRPVITYEIADGINLATLFPEDLLQERDNVQLRVVNYILYGNGKPIRGISH 825

Query: 76   TSIQLVRTCLVLNWNQEKKGSSIEE 2
            TSIQLVRTCLVLNW+QEK GSS EE
Sbjct: 826  TSIQLVRTCLVLNWDQEKNGSSREE 850


>APY18813.1 RNA polymerase beta'' subunit (chloroplast) [Akebia quinata]
          Length = 1381

 Score =  274 bits (701), Expect = 7e-83
 Identities = 132/145 (91%), Positives = 139/145 (95%)
 Frame = -3

Query: 436  RVERKKKRIELKIFSGDIHFPGETDKISWHSGILIPPGTGKKNAGDSKKLKNWIYVQRIT 257
            RVERKKKR+ELKIFSGDIHFPGETDKISWHSGILIPPGTGKKN+ +SKKLKNWIYVQRIT
Sbjct: 706  RVERKKKRVELKIFSGDIHFPGETDKISWHSGILIPPGTGKKNSKESKKLKNWIYVQRIT 765

Query: 256  PIKKKFFVLVRPVVTYEIADGINLATLFPHDLLQERDNVQLRVVNYILYGNGKPIRGIYH 77
            P KKK+FVLVRPV+TYEIADGINLATLFP DLLQERDNVQLRVVNYILYGNGKPIRGI H
Sbjct: 766  PTKKKYFVLVRPVITYEIADGINLATLFPEDLLQERDNVQLRVVNYILYGNGKPIRGISH 825

Query: 76   TSIQLVRTCLVLNWNQEKKGSSIEE 2
            TSIQLVRTCLVLNW+Q+K GSS EE
Sbjct: 826  TSIQLVRTCLVLNWDQDKNGSSREE 850


>ABD93771.1 RNA polymerase beta chain, partial (chloroplast) [Lardizabala
           biternata]
          Length = 861

 Score =  267 bits (683), Expect = 3e-82
 Identities = 131/145 (90%), Positives = 137/145 (94%)
 Frame = -3

Query: 436 RVERKKKRIELKIFSGDIHFPGETDKISWHSGILIPPGTGKKNAGDSKKLKNWIYVQRIT 257
           RVERKKKRIELKIFSGDIHFPGETDKISWHSGILIPPGTGKKN+ +SKK KN IYVQRIT
Sbjct: 261 RVERKKKRIELKIFSGDIHFPGETDKISWHSGILIPPGTGKKNSKESKKWKNGIYVQRIT 320

Query: 256 PIKKKFFVLVRPVVTYEIADGINLATLFPHDLLQERDNVQLRVVNYILYGNGKPIRGIYH 77
           P KKK+FVLVRPV+TYEIADGINLATLFP DLLQERDNVQLRVVNYILYGNGKPIRGI H
Sbjct: 321 PTKKKYFVLVRPVITYEIADGINLATLFPQDLLQERDNVQLRVVNYILYGNGKPIRGISH 380

Query: 76  TSIQLVRTCLVLNWNQEKKGSSIEE 2
           TSIQLVRTCLVLNW+Q+K GSS EE
Sbjct: 381 TSIQLVRTCLVLNWDQDKNGSSREE 405


>ABD93860.1 RNA polymerase beta chain, partial (chloroplast) [Peumus boldus]
          Length = 758

 Score =  264 bits (675), Expect = 8e-82
 Identities = 131/146 (89%), Positives = 138/146 (94%), Gaps = 1/146 (0%)
 Frame = -3

Query: 436 RVERKKKRIELKIFSGDIHFPGETDKISWHSGILIPPGTGKKNAGDSKKLKNWIYVQRIT 257
           RVERKKKRIELKIFSGDIHFPGETDKIS H GILIPPGTGKKN+ +SKK KNWIYVQRIT
Sbjct: 208 RVERKKKRIELKIFSGDIHFPGETDKISRHCGILIPPGTGKKNSKESKKWKNWIYVQRIT 267

Query: 256 PIKKKFFVLVRPVVTYEIADGINLATLFPHDLLQERDNVQLRVVNYILYGNGKPIRGIYH 77
           P KKK+FVLVRPVVTYEIADGINLATLFP D LQERDNVQLRVV+YILYGNGKPIRGIYH
Sbjct: 268 PTKKKYFVLVRPVVTYEIADGINLATLFPQDPLQERDNVQLRVVHYILYGNGKPIRGIYH 327

Query: 76  TSIQLVRTCLVLNWNQEKKGS-SIEE 2
           TS+QLVRTCLVLNWNQ++KGS SIEE
Sbjct: 328 TSLQLVRTCLVLNWNQDRKGSISIEE 353


>ABD93725.1 RNA polymerase beta chain, partial (chloroplast) [Xanthorhiza
           simplicissima]
          Length = 861

 Score =  266 bits (680), Expect = 8e-82
 Identities = 128/145 (88%), Positives = 139/145 (95%)
 Frame = -3

Query: 436 RVERKKKRIELKIFSGDIHFPGETDKISWHSGILIPPGTGKKNAGDSKKLKNWIYVQRIT 257
           RV++KKK+IELKIFSGDI+FPGETDKISWHSGILIPPGTGKKN+ DSKKLKNWIYVQRIT
Sbjct: 261 RVDKKKKKIELKIFSGDIYFPGETDKISWHSGILIPPGTGKKNSKDSKKLKNWIYVQRIT 320

Query: 256 PIKKKFFVLVRPVVTYEIADGINLATLFPHDLLQERDNVQLRVVNYILYGNGKPIRGIYH 77
           P KKK+FVLVRPVVTYEIA+GINLATLFP D LQERD+VQLRVVNYILYGNGKPIRGI H
Sbjct: 321 PTKKKYFVLVRPVVTYEIANGINLATLFPRDSLQERDSVQLRVVNYILYGNGKPIRGISH 380

Query: 76  TSIQLVRTCLVLNWNQEKKGSSIEE 2
           T+IQLVRTCLVLNW+Q+K GSSIEE
Sbjct: 381 TNIQLVRTCLVLNWDQDKNGSSIEE 405


>ABD93759.1 RNA polymerase beta chain, partial (chloroplast) [Ilex sp. Qiu
           94038]
          Length = 866

 Score =  265 bits (676), Expect = 3e-81
 Identities = 130/145 (89%), Positives = 137/145 (94%)
 Frame = -3

Query: 436 RVERKKKRIELKIFSGDIHFPGETDKISWHSGILIPPGTGKKNAGDSKKLKNWIYVQRIT 257
           RVERKKKRIELKIFSGDIHFPGETDKIS HSG+LIPPGTGK N+ +SKKLKNWIYVQRIT
Sbjct: 261 RVERKKKRIELKIFSGDIHFPGETDKISRHSGVLIPPGTGKTNSKESKKLKNWIYVQRIT 320

Query: 256 PIKKKFFVLVRPVVTYEIADGINLATLFPHDLLQERDNVQLRVVNYILYGNGKPIRGIYH 77
           PIKKK+FVLVRPVVTYEI DGINLATLFP DLLQERDNVQLRV+NYILYGNGKPIRGI  
Sbjct: 321 PIKKKYFVLVRPVVTYEITDGINLATLFPLDLLQERDNVQLRVINYILYGNGKPIRGISD 380

Query: 76  TSIQLVRTCLVLNWNQEKKGSSIEE 2
           TSIQLVRTCLVLNW+Q+KK SSIEE
Sbjct: 381 TSIQLVRTCLVLNWDQDKKSSSIEE 405


>ABD93723.1 RNA polymerase beta chain, partial (chloroplast) [Nelumbo nucifera]
          Length = 866

 Score =  264 bits (675), Expect = 5e-81
 Identities = 132/146 (90%), Positives = 138/146 (94%), Gaps = 1/146 (0%)
 Frame = -3

Query: 436 RVERKKKRIELKIFSGDIHFPGETDKISWHSGILIPPGTGKKNAGDSK-KLKNWIYVQRI 260
           RVERKKK+IELKIFSGDIHFPGETDKIS HSGILIPPG  KKN+ +SK KLKNWIY+QRI
Sbjct: 262 RVERKKKKIELKIFSGDIHFPGETDKISRHSGILIPPGAEKKNSKESKTKLKNWIYIQRI 321

Query: 259 TPIKKKFFVLVRPVVTYEIADGINLATLFPHDLLQERDNVQLRVVNYILYGNGKPIRGIY 80
           TP KKKFFVLVRPVVTYEIADGINLATLFP DLLQERDNVQLRVVNYILYGNGKPIRGI 
Sbjct: 322 TPTKKKFFVLVRPVVTYEIADGINLATLFPQDLLQERDNVQLRVVNYILYGNGKPIRGIS 381

Query: 79  HTSIQLVRTCLVLNWNQEKKGSSIEE 2
           HTSIQLVRTCLVLNW+Q+KKGSSIEE
Sbjct: 382 HTSIQLVRTCLVLNWDQDKKGSSIEE 407


>ABD93747.1 RNA polymerase beta chain, partial (chloroplast) [Liriodendron
           chinense]
          Length = 839

 Score =  263 bits (673), Expect = 6e-81
 Identities = 130/145 (89%), Positives = 137/145 (94%)
 Frame = -3

Query: 436 RVERKKKRIELKIFSGDIHFPGETDKISWHSGILIPPGTGKKNAGDSKKLKNWIYVQRIT 257
           RVERKKK+IELKIFSGDIHFPGETDKIS HSGILIPPGTGKKN+ +SKKLKNWIYVQRIT
Sbjct: 241 RVERKKKKIELKIFSGDIHFPGETDKISRHSGILIPPGTGKKNSKESKKLKNWIYVQRIT 300

Query: 256 PIKKKFFVLVRPVVTYEIADGINLATLFPHDLLQERDNVQLRVVNYILYGNGKPIRGIYH 77
           P KKK+FV VRPVVTYEIADGINL TLFP DLLQERDNVQLRVVNYILYGNGKPIRGIYH
Sbjct: 301 PTKKKYFVSVRPVVTYEIADGINLGTLFPQDLLQERDNVQLRVVNYILYGNGKPIRGIYH 360

Query: 76  TSIQLVRTCLVLNWNQEKKGSSIEE 2
           TSIQLVRTCLVLNW+Q++ G SIEE
Sbjct: 361 TSIQLVRTCLVLNWDQDRNG-SIEE 384


>ABD93854.1 RNA polymerase beta chain, partial (chloroplast) [Cinnamodendron
           ekmanii]
          Length = 745

 Score =  261 bits (667), Expect = 9e-81
 Identities = 130/145 (89%), Positives = 137/145 (94%)
 Frame = -3

Query: 436 RVERKKKRIELKIFSGDIHFPGETDKISWHSGILIPPGTGKKNAGDSKKLKNWIYVQRIT 257
           RVERKKKRIEL+IFSGDIHFPGETDKIS HSGILIPPGTGKKN+ +SKKLKNWIYVQRIT
Sbjct: 202 RVERKKKRIELQIFSGDIHFPGETDKISRHSGILIPPGTGKKNSKESKKLKNWIYVQRIT 261

Query: 256 PIKKKFFVLVRPVVTYEIADGINLATLFPHDLLQERDNVQLRVVNYILYGNGKPIRGIYH 77
           P KKK+FVLVRPVVTYEIADGINLATLFP DLLQERDNV+LRVVNYILYG GKPIRGI H
Sbjct: 262 PTKKKYFVLVRPVVTYEIADGINLATLFPQDLLQERDNVKLRVVNYILYGKGKPIRGISH 321

Query: 76  TSIQLVRTCLVLNWNQEKKGSSIEE 2
           TSIQLVRTCLVLNWNQ++ G SIEE
Sbjct: 322 TSIQLVRTCLVLNWNQDQNG-SIEE 345


>ABD93843.1 RNA polymerase beta chain, partial (chloroplast) [Persoonia
           katerae]
          Length = 827

 Score =  263 bits (671), Expect = 1e-80
 Identities = 132/146 (90%), Positives = 138/146 (94%), Gaps = 1/146 (0%)
 Frame = -3

Query: 436 RVERKKKRIELKIFSGDIHFPGETDKISWHSGILIPPGTGKKNAGDSK-KLKNWIYVQRI 260
           RVERKKKRIELKIFSGDIHFPGETDKIS HSGILIPPG GKK++ +SK KLKNWIYVQRI
Sbjct: 219 RVERKKKRIELKIFSGDIHFPGETDKISRHSGILIPPGGGKKDSKESKTKLKNWIYVQRI 278

Query: 259 TPIKKKFFVLVRPVVTYEIADGINLATLFPHDLLQERDNVQLRVVNYILYGNGKPIRGIY 80
           TP KKK+FVLVRPVVTYEIADGINLATLFP DLLQERDNVQLRVVNYILYGNGKPIRGI 
Sbjct: 279 TPAKKKYFVLVRPVVTYEIADGINLATLFPQDLLQERDNVQLRVVNYILYGNGKPIRGIS 338

Query: 79  HTSIQLVRTCLVLNWNQEKKGSSIEE 2
           HTSIQLVRTCLV+NW+Q KKGSSIEE
Sbjct: 339 HTSIQLVRTCLVMNWDQGKKGSSIEE 364


>YP_740640.1 RNA polymerase beta'' subunit [Nandina domestica] Q09FX1.1 RecName:
            Full=DNA-directed RNA polymerase subunit beta''; AltName:
            Full=PEP; AltName: Full=Plastid-encoded RNA polymerase
            subunit beta''; Short=RNA polymerase subunit beta''
            ABI49853.1 RNA polymerase beta'' subunit (chloroplast)
            [Nandina domestica]
          Length = 1377

 Score =  268 bits (685), Expect = 1e-80
 Identities = 129/145 (88%), Positives = 137/145 (94%)
 Frame = -3

Query: 436  RVERKKKRIELKIFSGDIHFPGETDKISWHSGILIPPGTGKKNAGDSKKLKNWIYVQRIT 257
            RVE+KKK+IELKIFSGDIHFPGETDKISWHSGILIPPGTGKKN+ +SK  KNWIYVQRIT
Sbjct: 702  RVEKKKKKIELKIFSGDIHFPGETDKISWHSGILIPPGTGKKNSKESKNFKNWIYVQRIT 761

Query: 256  PIKKKFFVLVRPVVTYEIADGINLATLFPHDLLQERDNVQLRVVNYILYGNGKPIRGIYH 77
            P KKK+FVLVRPVVTYEIADGINLATLFP D LQERDNVQLRVVNYILYGNGKPIRGI H
Sbjct: 762  PTKKKYFVLVRPVVTYEIADGINLATLFPQDPLQERDNVQLRVVNYILYGNGKPIRGISH 821

Query: 76   TSIQLVRTCLVLNWNQEKKGSSIEE 2
            T+IQLVRTCLVLNW+QEK GSS+EE
Sbjct: 822  TNIQLVRTCLVLNWDQEKNGSSMEE 846


>ABD93852.1 RNA polymerase beta chain, partial (chloroplast) [Degeneria
           vitiensis]
          Length = 765

 Score =  261 bits (666), Expect = 2e-80
 Identities = 130/145 (89%), Positives = 136/145 (93%)
 Frame = -3

Query: 436 RVERKKKRIELKIFSGDIHFPGETDKISWHSGILIPPGTGKKNAGDSKKLKNWIYVQRIT 257
           RVERKKK+IELKIFSGDIHFPGETDKIS HSGILIPPGTGKKNA +SKKLKNWIYVQRIT
Sbjct: 208 RVERKKKKIELKIFSGDIHFPGETDKISRHSGILIPPGTGKKNAKESKKLKNWIYVQRIT 267

Query: 256 PIKKKFFVLVRPVVTYEIADGINLATLFPHDLLQERDNVQLRVVNYILYGNGKPIRGIYH 77
           P KKK+FV VRPVVTYEIADGINLA LFP DLLQERDNVQLRVVNYILYGN KPIRGIYH
Sbjct: 268 PTKKKYFVSVRPVVTYEIADGINLAMLFPQDLLQERDNVQLRVVNYILYGNRKPIRGIYH 327

Query: 76  TSIQLVRTCLVLNWNQEKKGSSIEE 2
           TSIQLVRTCLVLNW+Q++ G SIEE
Sbjct: 328 TSIQLVRTCLVLNWDQDRNG-SIEE 351


>ABQ15077.1 RNA polymerase beta' subunit, partial (chloroplast) [Rhodoleia
           championii]
          Length = 813

 Score =  261 bits (667), Expect = 3e-80
 Identities = 128/145 (88%), Positives = 136/145 (93%)
 Frame = -3

Query: 436 RVERKKKRIELKIFSGDIHFPGETDKISWHSGILIPPGTGKKNAGDSKKLKNWIYVQRIT 257
           RVERKKKRIELKIFSGDIHFPGETDKI+ H GILIPPGTGK N+ +SKKLKNWIYVQRIT
Sbjct: 237 RVERKKKRIELKIFSGDIHFPGETDKIARHXGILIPPGTGKTNSKESKKLKNWIYVQRIT 296

Query: 256 PIKKKFFVLVRPVVTYEIADGINLATLFPHDLLQERDNVQLRVVNYILYGNGKPIRGIYH 77
           P KKK+FVLVRPVVTYEIADGINLATLFP DLLQE+DN++LRVVNYILYGNGKPIRGIY 
Sbjct: 297 PTKKKYFVLVRPVVTYEIADGINLATLFPQDLLQEKDNMKLRVVNYILYGNGKPIRGIYD 356

Query: 76  TSIQLVRTCLVLNWNQEKKGSSIEE 2
           TSIQLVRTCLVLNW+QEKK SSI E
Sbjct: 357 TSIQLVRTCLVLNWDQEKKSSSIGE 381


>ABD93767.1 RNA polymerase beta chain, partial (chloroplast) [Berberis bealei]
          Length = 833

 Score =  261 bits (667), Expect = 4e-80
 Identities = 125/145 (86%), Positives = 136/145 (93%)
 Frame = -3

Query: 436 RVERKKKRIELKIFSGDIHFPGETDKISWHSGILIPPGTGKKNAGDSKKLKNWIYVQRIT 257
           RVE+KKK+IELKIFSGDIHFPGETDKISWHSGILIPPGTGKK + +SKKLKNWIYVQRIT
Sbjct: 230 RVEKKKKKIELKIFSGDIHFPGETDKISWHSGILIPPGTGKKTSKESKKLKNWIYVQRIT 289

Query: 256 PIKKKFFVLVRPVVTYEIADGINLATLFPHDLLQERDNVQLRVVNYILYGNGKPIRGIYH 77
           P KKK+FVLVRPVVTYEIADG+NLATLF  D LQERDNVQLRVVNYILY NGKPIRG+ H
Sbjct: 290 PTKKKYFVLVRPVVTYEIADGVNLATLFSQDPLQERDNVQLRVVNYILYKNGKPIRGVSH 349

Query: 76  TSIQLVRTCLVLNWNQEKKGSSIEE 2
           T+IQLVRTCL+LNW+QEK GSS+EE
Sbjct: 350 TNIQLVRTCLLLNWDQEKNGSSMEE 374