BLASTX nr result
ID: Papaver32_contig00043435
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver32_contig00043435
(826 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
YP_009234973.1 RNA polymerase beta' subunit (chloroplast) [Papav... 434 e-146
ABW40754.1 RNA polymerase beta subunit (chloroplast) [Papaver so... 424 e-142
ABW40753.1 RNA polymerase beta subunit (chloroplast) [Papaver so... 423 e-142
YP_740556.1 RNA polymerase beta [Platanus occidentalis] Q09G55.1... 409 e-136
YP_009092294.1 RNA polymerase beta (chloroplast) [Macadamia inte... 407 e-136
YP_008993167.1 RNA polymerase beta (chloroplast) [Magnolia cathc... 404 e-134
YP_009136386.1 RNA polymerase beta' subunit (chloroplast) [Prunu... 403 e-134
YP_009136302.1 RNA polymerase beta' subunit (chloroplast) [Prunu... 403 e-134
YP_009020029.1 RNA polymerase beta (plastid) [Prunus mume] AHK26... 403 e-134
YP_004021656.1 RNA polymerase beta [Prunus persica] YP_009024672... 403 e-134
YP_008993597.1 RNA polymerase beta (chloroplast) [Magnolia odora... 403 e-134
YP_009234885.1 RNA polymerase beta' subunit (chloroplast) [Pachy... 402 e-134
YP_009234716.1 RNA polymerase beta' subunit (chloroplast) [Sabia... 402 e-134
YP_009130118.1 RNA polymerase beta (chloroplast) [Carludovica pa... 402 e-133
AKR81259.1 RNA polymerase beta (plastid) [Cyclanthus bipartitus] 402 e-133
YP_009234546.1 RNA polymerase beta' subunit (chloroplast) [Eupte... 401 e-133
YP_009114860.1 RNA polymerase beta' subunit [Thalictrum coreanum... 401 e-133
YP_004563858.1 RNA polymerase beta [Nelumbo lutea] ACN49314.1 RN... 400 e-133
ADD31173.1 RNA polymerase beta' subunit protein (chloroplast) [B... 400 e-133
YP_005296091.1 rpoC1 gene product (chloroplast) [Pentactina rupi... 400 e-133
>YP_009234973.1 RNA polymerase beta' subunit (chloroplast) [Papaver somniferum]
AMD08691.1 RNA polymerase beta' subunit (chloroplast)
[Papaver somniferum]
Length = 682
Score = 434 bits (1117), Expect = e-146
Identities = 208/210 (99%), Positives = 209/210 (99%)
Frame = +3
Query: 3 GRAICLYPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISIPT 182
GRAICL+PLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISIPT
Sbjct: 473 GRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISIPT 532
Query: 183 QDMLMGLYVLTIGNRRGICANRYNPCNRLNYQNEKIDDNNYKYTKEKEPYFCSSYDALGA 362
QDMLMGLYVLTIGNRRGICANRYNPCN LNYQNEKIDDNNYKYTKEKEPYFCSSYDALGA
Sbjct: 533 QDMLMGLYVLTIGNRRGICANRYNPCNHLNYQNEKIDDNNYKYTKEKEPYFCSSYDALGA 592
Query: 363 YRQKRINLDSPLWLRWRLDQRVIGSREVPIEVQYDSFGTYHEIYGHYLIVRSVKKETLCI 542
YRQKRINLDSPLWLRWRLDQRVIGSREVPIEVQYDSFGTYHEIYGHYLIVRSVKKETLCI
Sbjct: 593 YRQKRINLDSPLWLRWRLDQRVIGSREVPIEVQYDSFGTYHEIYGHYLIVRSVKKETLCI 652
Query: 543 YIRTTVGHISFYREIEEAIQGFCRASSYGT 632
YIRTTVGHISFYREIEEAIQGFCRASSYGT
Sbjct: 653 YIRTTVGHISFYREIEEAIQGFCRASSYGT 682
>ABW40754.1 RNA polymerase beta subunit (chloroplast) [Papaver somniferum]
Length = 682
Score = 424 bits (1091), Expect = e-142
Identities = 204/210 (97%), Positives = 206/210 (98%)
Frame = +3
Query: 3 GRAICLYPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISIPT 182
GRAICL+PLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISIPT
Sbjct: 473 GRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISIPT 532
Query: 183 QDMLMGLYVLTIGNRRGICANRYNPCNRLNYQNEKIDDNNYKYTKEKEPYFCSSYDALGA 362
QDMLMGLYVLTIGNRRGICANRYNPCN LNYQNEKIDDNNYKYTKEKEPYFCSSYDALGA
Sbjct: 533 QDMLMGLYVLTIGNRRGICANRYNPCNHLNYQNEKIDDNNYKYTKEKEPYFCSSYDALGA 592
Query: 363 YRQKRINLDSPLWLRWRLDQRVIGSREVPIEVQYDSFGTYHEIYGHYLIVRSVKKETLCI 542
YRQKRINLDSPLWLRWRLDQRVIGSREVPIEVQYDSFGTYHEIYGHYLIVRSVKKETLCI
Sbjct: 593 YRQKRINLDSPLWLRWRLDQRVIGSREVPIEVQYDSFGTYHEIYGHYLIVRSVKKETLCI 652
Query: 543 YIRTTVGHISFYREIEEAIQGFCRASSYGT 632
YIRTTVGHISFYREIEEAIQGF +A SY T
Sbjct: 653 YIRTTVGHISFYREIEEAIQGFSQACSYDT 682
>ABW40753.1 RNA polymerase beta subunit (chloroplast) [Papaver somniferum]
Length = 682
Score = 423 bits (1087), Expect = e-142
Identities = 203/210 (96%), Positives = 205/210 (97%)
Frame = +3
Query: 3 GRAICLYPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISIPT 182
GR ICL+PLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISIPT
Sbjct: 473 GRTICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISIPT 532
Query: 183 QDMLMGLYVLTIGNRRGICANRYNPCNRLNYQNEKIDDNNYKYTKEKEPYFCSSYDALGA 362
QDMLMGLYVLTIGNRRGICANRYNPCN LNYQNEKIDDNNYKYTKEKEPYFCSSYDALGA
Sbjct: 533 QDMLMGLYVLTIGNRRGICANRYNPCNHLNYQNEKIDDNNYKYTKEKEPYFCSSYDALGA 592
Query: 363 YRQKRINLDSPLWLRWRLDQRVIGSREVPIEVQYDSFGTYHEIYGHYLIVRSVKKETLCI 542
YRQKRINLDSPLWLRWRLDQRVIGSREVPIEVQYDSFGTYHEIYGHYLIVRSVKKETLCI
Sbjct: 593 YRQKRINLDSPLWLRWRLDQRVIGSREVPIEVQYDSFGTYHEIYGHYLIVRSVKKETLCI 652
Query: 543 YIRTTVGHISFYREIEEAIQGFCRASSYGT 632
YIRTTVGHISFYREIEEAIQGF +A SY T
Sbjct: 653 YIRTTVGHISFYREIEEAIQGFSQACSYDT 682
>YP_740556.1 RNA polymerase beta [Platanus occidentalis] Q09G55.1 RecName:
Full=DNA-directed RNA polymerase subunit beta'; AltName:
Full=PEP; AltName: Full=Plastid-encoded RNA polymerase
subunit beta'; Short=RNA polymerase subunit beta'
ABI49769.1 RNA polymerase beta (chloroplast) [Platanus
occidentalis]
Length = 682
Score = 409 bits (1050), Expect = e-136
Identities = 197/210 (93%), Positives = 202/210 (96%)
Frame = +3
Query: 3 GRAICLYPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISIPT 182
G AICL+PLV KGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPIS+PT
Sbjct: 473 GCAICLHPLVRKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISVPT 532
Query: 183 QDMLMGLYVLTIGNRRGICANRYNPCNRLNYQNEKIDDNNYKYTKEKEPYFCSSYDALGA 362
QDMLMGLYVLTIGNRRGICANRYNP NR NYQNE+IDDNNY+YTKEKEPYFCSSYDALGA
Sbjct: 533 QDMLMGLYVLTIGNRRGICANRYNPRNRRNYQNERIDDNNYRYTKEKEPYFCSSYDALGA 592
Query: 363 YRQKRINLDSPLWLRWRLDQRVIGSREVPIEVQYDSFGTYHEIYGHYLIVRSVKKETLCI 542
YRQKRINLDSPLWLRWRLDQRVI SREVPIEVQY+S GTYHEIYGHYLIVRSVKKE LCI
Sbjct: 593 YRQKRINLDSPLWLRWRLDQRVIASREVPIEVQYESLGTYHEIYGHYLIVRSVKKEILCI 652
Query: 543 YIRTTVGHISFYREIEEAIQGFCRASSYGT 632
YIRTTVGHISFYREIEEAIQGFCRA SYGT
Sbjct: 653 YIRTTVGHISFYREIEEAIQGFCRACSYGT 682
>YP_009092294.1 RNA polymerase beta (chloroplast) [Macadamia integrifolia] AHB38150.1
RNA polymerase beta (chloroplast) [Macadamia
integrifolia]
Length = 682
Score = 407 bits (1047), Expect = e-136
Identities = 196/210 (93%), Positives = 202/210 (96%)
Frame = +3
Query: 3 GRAICLYPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISIPT 182
GRAICL+PLV KGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPIS+PT
Sbjct: 473 GRAICLHPLVRKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISVPT 532
Query: 183 QDMLMGLYVLTIGNRRGICANRYNPCNRLNYQNEKIDDNNYKYTKEKEPYFCSSYDALGA 362
QDMLMGLYVLTIGNRRGICANRYNP NR NYQNE+IDDNNYKY K+KEPYFCSSYDALGA
Sbjct: 533 QDMLMGLYVLTIGNRRGICANRYNPWNRRNYQNERIDDNNYKYKKKKEPYFCSSYDALGA 592
Query: 363 YRQKRINLDSPLWLRWRLDQRVIGSREVPIEVQYDSFGTYHEIYGHYLIVRSVKKETLCI 542
YRQKRINL+SPLWLRWRLDQRVI SREVPIEVQY+S GTYHEIYGHYLIVRSVKKE LCI
Sbjct: 593 YRQKRINLNSPLWLRWRLDQRVIASREVPIEVQYESLGTYHEIYGHYLIVRSVKKEILCI 652
Query: 543 YIRTTVGHISFYREIEEAIQGFCRASSYGT 632
YIRTTVGHISFYREIEEAIQGFCRA SYGT
Sbjct: 653 YIRTTVGHISFYREIEEAIQGFCRARSYGT 682
>YP_008993167.1 RNA polymerase beta (chloroplast) [Magnolia cathcartii] AFP92386.1
RNA polymerase beta (chloroplast) [Magnolia cathcartii]
Length = 684
Score = 404 bits (1039), Expect = e-134
Identities = 194/210 (92%), Positives = 201/210 (95%)
Frame = +3
Query: 3 GRAICLYPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISIPT 182
GRAICL+PLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPIS+PT
Sbjct: 477 GRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISVPT 536
Query: 183 QDMLMGLYVLTIGNRRGICANRYNPCNRLNYQNEKIDDNNYKYTKEKEPYFCSSYDALGA 362
QDML+GLY+LTIGNRRGIC+NRYNPCNR NYQNE +DDN KYTKEKEPYFCSSYDALGA
Sbjct: 537 QDMLIGLYILTIGNRRGICSNRYNPCNRRNYQNETVDDN--KYTKEKEPYFCSSYDALGA 594
Query: 363 YRQKRINLDSPLWLRWRLDQRVIGSREVPIEVQYDSFGTYHEIYGHYLIVRSVKKETLCI 542
YRQKRINLDSPLWLRWRLDQRVI SREVPIEVQY+S GTYHEIYGHYLIVRSVKKE LCI
Sbjct: 595 YRQKRINLDSPLWLRWRLDQRVIASREVPIEVQYESLGTYHEIYGHYLIVRSVKKEILCI 654
Query: 543 YIRTTVGHISFYREIEEAIQGFCRASSYGT 632
YIRTTVGHISFYREIEEAIQGFCRA SY T
Sbjct: 655 YIRTTVGHISFYREIEEAIQGFCRAYSYDT 684
>YP_009136386.1 RNA polymerase beta' subunit (chloroplast) [Prunus maximowiczii]
AKC99596.1 RNA polymerase beta' subunit (chloroplast)
[Prunus maximowiczii] AKC99764.1 RNA polymerase beta'
subunit (chloroplast) [Prunus serrulata var. spontanea]
Length = 683
Score = 403 bits (1035), Expect = e-134
Identities = 188/210 (89%), Positives = 200/210 (95%)
Frame = +3
Query: 3 GRAICLYPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISIPT 182
G AICL+PLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPIS+PT
Sbjct: 474 GHAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISVPT 533
Query: 183 QDMLMGLYVLTIGNRRGICANRYNPCNRLNYQNEKIDDNNYKYTKEKEPYFCSSYDALGA 362
QDML+GLYVLT GNRRGICANRYNPCNR NYQN++IDDNNYKYTKEKEP+FC+SYDA+GA
Sbjct: 534 QDMLIGLYVLTSGNRRGICANRYNPCNRRNYQNKRIDDNNYKYTKEKEPFFCNSYDAIGA 593
Query: 363 YRQKRINLDSPLWLRWRLDQRVIGSREVPIEVQYDSFGTYHEIYGHYLIVRSVKKETLCI 542
YRQKRINLDSPLWLRWRLDQRVI SRE PIEV Y+S GTYHEIYGHYLIVRS+KKE +CI
Sbjct: 594 YRQKRINLDSPLWLRWRLDQRVITSRETPIEVHYESLGTYHEIYGHYLIVRSIKKEIICI 653
Query: 543 YIRTTVGHISFYREIEEAIQGFCRASSYGT 632
Y+RTTVGHIS YREIEEAIQGFCRA SYGT
Sbjct: 654 YVRTTVGHISLYREIEEAIQGFCRAYSYGT 683
>YP_009136302.1 RNA polymerase beta' subunit (chloroplast) [Prunus yedoensis]
YP_009136470.1 RNA polymerase beta' subunit (chloroplast)
[Prunus padus] YP_009266595.1 RNA polymerase beta
(chloroplast) [Prunus pseudocerasus] AKC99512.1 RNA
polymerase beta' subunit (chloroplast) [Prunus yedoensis]
AKC99680.1 RNA polymerase beta' subunit (chloroplast)
[Prunus padus] AKC99848.1 RNA polymerase beta' subunit
(chloroplast) [Prunus subhirtella var. subhirtella]
AKC99932.1 RNA polymerase beta' subunit (chloroplast)
[Prunus subhirtella var. subhirtella] AKN00046.1 RNA
polymerase beta (chloroplast) [Prunus yedoensis]
ALR69141.1 RNA polymerase beta (plastid) [Prunus
hypoleuca] AMC32339.1 RNA polymerase beta' subunit
(chloroplast) [Prunus virginiana] ANK78980.1 RNA
polymerase beta (chloroplast) [Prunus pseudocerasus]
Length = 683
Score = 403 bits (1035), Expect = e-134
Identities = 188/210 (89%), Positives = 200/210 (95%)
Frame = +3
Query: 3 GRAICLYPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISIPT 182
G AICL+PLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPIS+PT
Sbjct: 474 GHAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISVPT 533
Query: 183 QDMLMGLYVLTIGNRRGICANRYNPCNRLNYQNEKIDDNNYKYTKEKEPYFCSSYDALGA 362
QDML+GLYVLT GNRRGICANRYNPCNR NYQN++IDDNNYKYTKEKEP+FC+SYDA+GA
Sbjct: 534 QDMLIGLYVLTSGNRRGICANRYNPCNRRNYQNKRIDDNNYKYTKEKEPFFCNSYDAIGA 593
Query: 363 YRQKRINLDSPLWLRWRLDQRVIGSREVPIEVQYDSFGTYHEIYGHYLIVRSVKKETLCI 542
YRQKRINLDSPLWLRWRLDQRVI SRE PIEV Y+S GTYHEIYGHYLIVRS+KKE +CI
Sbjct: 594 YRQKRINLDSPLWLRWRLDQRVITSRETPIEVHYESLGTYHEIYGHYLIVRSIKKEIICI 653
Query: 543 YIRTTVGHISFYREIEEAIQGFCRASSYGT 632
Y+RTTVGHIS YREIEEAIQGFCRA SYGT
Sbjct: 654 YVRTTVGHISLYREIEEAIQGFCRAYSYGT 683
>YP_009020029.1 RNA polymerase beta (plastid) [Prunus mume] AHK26865.1 RNA polymerase
beta (plastid) [Prunus mume]
Length = 683
Score = 403 bits (1035), Expect = e-134
Identities = 188/210 (89%), Positives = 200/210 (95%)
Frame = +3
Query: 3 GRAICLYPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISIPT 182
G AICL+PLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPIS+PT
Sbjct: 474 GHAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISVPT 533
Query: 183 QDMLMGLYVLTIGNRRGICANRYNPCNRLNYQNEKIDDNNYKYTKEKEPYFCSSYDALGA 362
QDML+GLYVLT GNRRGICANRYNPCNR NYQN++IDDNNYKYTKEKEP+FC+SYDA+GA
Sbjct: 534 QDMLIGLYVLTSGNRRGICANRYNPCNRRNYQNKRIDDNNYKYTKEKEPFFCNSYDAIGA 593
Query: 363 YRQKRINLDSPLWLRWRLDQRVIGSREVPIEVQYDSFGTYHEIYGHYLIVRSVKKETLCI 542
YRQKRINLDSPLWLRWRLDQRVI SRE PIEV Y+S GTYHEIYGHYLIVRS+KKE +CI
Sbjct: 594 YRQKRINLDSPLWLRWRLDQRVITSRETPIEVHYESLGTYHEIYGHYLIVRSIKKEIICI 653
Query: 543 YIRTTVGHISFYREIEEAIQGFCRASSYGT 632
Y+RTTVGHIS YREIEEAIQGFCRA SYGT
Sbjct: 654 YVRTTVGHISLYREIEEAIQGFCRAYSYGT 683
>YP_004021656.1 RNA polymerase beta [Prunus persica] YP_009024672.1 RNA polymerase
beta (chloroplast) [Prunus kansuensis] ADO64966.1 RNA
polymerase beta (chloroplast) [Prunus persica] AHN13528.1
RNA polymerase beta (chloroplast) [Prunus kansuensis]
Length = 683
Score = 403 bits (1035), Expect = e-134
Identities = 188/210 (89%), Positives = 200/210 (95%)
Frame = +3
Query: 3 GRAICLYPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISIPT 182
G AICL+PLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPIS+PT
Sbjct: 474 GHAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISVPT 533
Query: 183 QDMLMGLYVLTIGNRRGICANRYNPCNRLNYQNEKIDDNNYKYTKEKEPYFCSSYDALGA 362
QDML+GLYVLT GNRRGICANRYNPCNR NYQN++IDDNNYKYTKEKEP+FC+SYDA+GA
Sbjct: 534 QDMLIGLYVLTSGNRRGICANRYNPCNRRNYQNKRIDDNNYKYTKEKEPFFCNSYDAIGA 593
Query: 363 YRQKRINLDSPLWLRWRLDQRVIGSREVPIEVQYDSFGTYHEIYGHYLIVRSVKKETLCI 542
YRQKRINLDSPLWLRWRLDQRVI SRE PIEV Y+S GTYHEIYGHYLIVRS+KKE +CI
Sbjct: 594 YRQKRINLDSPLWLRWRLDQRVITSRETPIEVHYESLGTYHEIYGHYLIVRSIKKEIICI 653
Query: 543 YIRTTVGHISFYREIEEAIQGFCRASSYGT 632
Y+RTTVGHIS YREIEEAIQGFCRA SYGT
Sbjct: 654 YVRTTVGHISLYREIEEAIQGFCRAYSYGT 683
>YP_008993597.1 RNA polymerase beta (chloroplast) [Magnolia odora] AFP92900.1 RNA
polymerase beta (chloroplast) [Magnolia odora]
Length = 685
Score = 403 bits (1035), Expect = e-134
Identities = 193/210 (91%), Positives = 200/210 (95%)
Frame = +3
Query: 3 GRAICLYPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISIPT 182
GRAICL+PLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPIS+PT
Sbjct: 478 GRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISVPT 537
Query: 183 QDMLMGLYVLTIGNRRGICANRYNPCNRLNYQNEKIDDNNYKYTKEKEPYFCSSYDALGA 362
QDML+GLY+LTIGNRRGIC+NRYNPCNR NYQNE +DDN KYTKEKEPYFCSSYDALGA
Sbjct: 538 QDMLIGLYILTIGNRRGICSNRYNPCNRRNYQNETVDDN--KYTKEKEPYFCSSYDALGA 595
Query: 363 YRQKRINLDSPLWLRWRLDQRVIGSREVPIEVQYDSFGTYHEIYGHYLIVRSVKKETLCI 542
YRQKRINLDSPLWLRWRLDQRVI SREVPIEVQY+S GTYHEIYGHYLIVRSVKKE LCI
Sbjct: 596 YRQKRINLDSPLWLRWRLDQRVIASREVPIEVQYESLGTYHEIYGHYLIVRSVKKEILCI 655
Query: 543 YIRTTVGHISFYREIEEAIQGFCRASSYGT 632
YIRTT GHISFYREIEEAIQGFCRA SY T
Sbjct: 656 YIRTTAGHISFYREIEEAIQGFCRAYSYDT 685
>YP_009234885.1 RNA polymerase beta' subunit (chloroplast) [Pachysandra terminalis]
AMD08603.1 RNA polymerase beta' subunit (chloroplast)
[Pachysandra terminalis]
Length = 682
Score = 402 bits (1034), Expect = e-134
Identities = 189/210 (90%), Positives = 202/210 (96%)
Frame = +3
Query: 3 GRAICLYPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISIPT 182
GRAICL+PLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPIS+PT
Sbjct: 473 GRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISVPT 532
Query: 183 QDMLMGLYVLTIGNRRGICANRYNPCNRLNYQNEKIDDNNYKYTKEKEPYFCSSYDALGA 362
QDML+GLYVLT GNRRGICANRYNPCNR NYQNE+ID+NNYKYTKEKEPYFCSSYDA+GA
Sbjct: 533 QDMLIGLYVLTSGNRRGICANRYNPCNRGNYQNERIDNNNYKYTKEKEPYFCSSYDAIGA 592
Query: 363 YRQKRINLDSPLWLRWRLDQRVIGSREVPIEVQYDSFGTYHEIYGHYLIVRSVKKETLCI 542
YRQKRINLDSPLWLRWRLDQR+I SREVPIEV Y+S GTYHEIYG+YLIV+S+KKE LCI
Sbjct: 593 YRQKRINLDSPLWLRWRLDQRIIASREVPIEVHYESLGTYHEIYGNYLIVKSIKKEILCI 652
Query: 543 YIRTTVGHISFYREIEEAIQGFCRASSYGT 632
YIRTTVGHISFYR+IEEA+QGF RA SYGT
Sbjct: 653 YIRTTVGHISFYRKIEEAVQGFSRACSYGT 682
>YP_009234716.1 RNA polymerase beta' subunit (chloroplast) [Sabia yunnanensis]
AMD08433.1 RNA polymerase beta' subunit (chloroplast)
[Sabia yunnanensis]
Length = 682
Score = 402 bits (1034), Expect = e-134
Identities = 193/210 (91%), Positives = 201/210 (95%)
Frame = +3
Query: 3 GRAICLYPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISIPT 182
GRAICL+PLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSH+NLLSPAIGDPIS+PT
Sbjct: 473 GRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHINLLSPAIGDPISVPT 532
Query: 183 QDMLMGLYVLTIGNRRGICANRYNPCNRLNYQNEKIDDNNYKYTKEKEPYFCSSYDALGA 362
QDML+GLYVLTIGNRRGICANRYNPCNR N QNE+IDDNNYKYTKEKEPYF S YDALGA
Sbjct: 533 QDMLIGLYVLTIGNRRGICANRYNPCNRGNSQNERIDDNNYKYTKEKEPYFFSFYDALGA 592
Query: 363 YRQKRINLDSPLWLRWRLDQRVIGSREVPIEVQYDSFGTYHEIYGHYLIVRSVKKETLCI 542
Y+QKRI+LDSPLWLRWRLDQRVI SREVPIEVQY+S GTYHEIYGHYLIVRSVK E LCI
Sbjct: 593 YQQKRIHLDSPLWLRWRLDQRVIASREVPIEVQYESLGTYHEIYGHYLIVRSVKTEILCI 652
Query: 543 YIRTTVGHISFYREIEEAIQGFCRASSYGT 632
YIRTTVGHISFYREIEEAIQGFCRA SYGT
Sbjct: 653 YIRTTVGHISFYREIEEAIQGFCRACSYGT 682
>YP_009130118.1 RNA polymerase beta (chloroplast) [Carludovica palmata] AJV88587.1
RNA polymerase beta (chloroplast) [Carludovica palmata]
Length = 682
Score = 402 bits (1033), Expect = e-133
Identities = 191/208 (91%), Positives = 199/208 (95%)
Frame = +3
Query: 3 GRAICLYPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISIPT 182
GRAICL+PLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPIS+PT
Sbjct: 473 GRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISVPT 532
Query: 183 QDMLMGLYVLTIGNRRGICANRYNPCNRLNYQNEKIDDNNYKYTKEKEPYFCSSYDALGA 362
QDML+GLYVLT+GNRRGICANRYNP N NYQN+ +D+NNYKYTKEKEPYFCSSYDALGA
Sbjct: 533 QDMLIGLYVLTLGNRRGICANRYNPSNCRNYQNQTVDNNNYKYTKEKEPYFCSSYDALGA 592
Query: 363 YRQKRINLDSPLWLRWRLDQRVIGSREVPIEVQYDSFGTYHEIYGHYLIVRSVKKETLCI 542
YRQKRINLDSPLWLRWRLDQRVIGSREVPIEVQY+S GTYHEIYGHYLIVRSVKKE CI
Sbjct: 593 YRQKRINLDSPLWLRWRLDQRVIGSREVPIEVQYESLGTYHEIYGHYLIVRSVKKEIRCI 652
Query: 543 YIRTTVGHISFYREIEEAIQGFCRASSY 626
YIRTTVGHISFYREIEEAIQGFCR SY
Sbjct: 653 YIRTTVGHISFYREIEEAIQGFCRTYSY 680
>AKR81259.1 RNA polymerase beta (plastid) [Cyclanthus bipartitus]
Length = 683
Score = 402 bits (1033), Expect = e-133
Identities = 191/208 (91%), Positives = 199/208 (95%)
Frame = +3
Query: 3 GRAICLYPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISIPT 182
GRAICL+PLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPIS+PT
Sbjct: 474 GRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISVPT 533
Query: 183 QDMLMGLYVLTIGNRRGICANRYNPCNRLNYQNEKIDDNNYKYTKEKEPYFCSSYDALGA 362
QDML+GLYVLT+GNRRGICANRYNP N NYQN+ +D+NNYKYTKEKEPYFCSSYDALGA
Sbjct: 534 QDMLIGLYVLTLGNRRGICANRYNPSNCRNYQNQTVDNNNYKYTKEKEPYFCSSYDALGA 593
Query: 363 YRQKRINLDSPLWLRWRLDQRVIGSREVPIEVQYDSFGTYHEIYGHYLIVRSVKKETLCI 542
YRQKRINLDSPLWLRWRLDQRVIGSREVPIEVQY+S GTYHEIYGHYLIVRSVKKE CI
Sbjct: 594 YRQKRINLDSPLWLRWRLDQRVIGSREVPIEVQYESLGTYHEIYGHYLIVRSVKKEIRCI 653
Query: 543 YIRTTVGHISFYREIEEAIQGFCRASSY 626
YIRTTVGHISFYREIEEAIQGFCR SY
Sbjct: 654 YIRTTVGHISFYREIEEAIQGFCRTYSY 681
>YP_009234546.1 RNA polymerase beta' subunit (chloroplast) [Euptelea pleiosperma]
AMD08264.1 RNA polymerase beta' subunit (chloroplast)
[Euptelea pleiosperma]
Length = 684
Score = 401 bits (1031), Expect = e-133
Identities = 196/212 (92%), Positives = 201/212 (94%), Gaps = 2/212 (0%)
Frame = +3
Query: 3 GRAICLYPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISIPT 182
GRAICL+PLV KGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPIS+PT
Sbjct: 473 GRAICLHPLVRKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISVPT 532
Query: 183 QDMLMGLYVLTIGNRRGICANRYNPCNRLNYQNEKIDDNNY--KYTKEKEPYFCSSYDAL 356
QDMLMGLYVLTIGNRRGICANRY+PCN NYQNEK+ DNNY KYTKEKEPYF SSYDAL
Sbjct: 533 QDMLMGLYVLTIGNRRGICANRYSPCNHRNYQNEKMYDNNYNYKYTKEKEPYFLSSYDAL 592
Query: 357 GAYRQKRINLDSPLWLRWRLDQRVIGSREVPIEVQYDSFGTYHEIYGHYLIVRSVKKETL 536
GAYRQKRINLDSPLWLRWRLDQRVI SREVPIEVQY+SFGTYHEIYGHYLIVRSVKKE
Sbjct: 593 GAYRQKRINLDSPLWLRWRLDQRVIASREVPIEVQYESFGTYHEIYGHYLIVRSVKKEIR 652
Query: 537 CIYIRTTVGHISFYREIEEAIQGFCRASSYGT 632
CIYIRTTVGHISFYREIEEAIQGFCRA SYGT
Sbjct: 653 CIYIRTTVGHISFYREIEEAIQGFCRACSYGT 684
>YP_009114860.1 RNA polymerase beta' subunit [Thalictrum coreanum] AIX03507.1 RNA
polymerase beta' subunit (plastid) [Thalictrum coreanum]
Length = 687
Score = 401 bits (1030), Expect = e-133
Identities = 194/210 (92%), Positives = 200/210 (95%)
Frame = +3
Query: 3 GRAICLYPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISIPT 182
GRAICL+PLVCKGFNADFDGDQMAVH+PLSLEAQAEARLLMFSHMNLLSPAIGDPIS+PT
Sbjct: 480 GRAICLHPLVCKGFNADFDGDQMAVHIPLSLEAQAEARLLMFSHMNLLSPAIGDPISVPT 539
Query: 183 QDMLMGLYVLTIGNRRGICANRYNPCNRLNYQNEKIDDNNYKYTKEKEPYFCSSYDALGA 362
QDMLMGLYVLTIGNRRGICANRYNP NR NYQNEKIDDNN+KYT KEPYFCSSYDALGA
Sbjct: 540 QDMLMGLYVLTIGNRRGICANRYNPWNRRNYQNEKIDDNNHKYT--KEPYFCSSYDALGA 597
Query: 363 YRQKRINLDSPLWLRWRLDQRVIGSREVPIEVQYDSFGTYHEIYGHYLIVRSVKKETLCI 542
YRQKRINLDSPLWLRWRLDQRVI REVPIEVQY+SFGTYHEIYGHYLIVR+VKKE LCI
Sbjct: 598 YRQKRINLDSPLWLRWRLDQRVIAPREVPIEVQYESFGTYHEIYGHYLIVRNVKKEILCI 657
Query: 543 YIRTTVGHISFYREIEEAIQGFCRASSYGT 632
IRTTVGHISFYREIEEAIQGFCRA SY T
Sbjct: 658 DIRTTVGHISFYREIEEAIQGFCRACSYST 687
>YP_004563858.1 RNA polymerase beta [Nelumbo lutea] ACN49314.1 RNA polymerase beta
(chloroplast) [Nelumbo lutea] AFH01532.1 RNA polymerase
beta (chloroplast) [Nelumbo lutea]
Length = 682
Score = 400 bits (1029), Expect = e-133
Identities = 193/210 (91%), Positives = 200/210 (95%)
Frame = +3
Query: 3 GRAICLYPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISIPT 182
GRAICL+PLV KGFNADFDGDQMAVHVPLSLEAQAEARLLMFSH NLLSPAIGDPISIPT
Sbjct: 473 GRAICLHPLVRKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHRNLLSPAIGDPISIPT 532
Query: 183 QDMLMGLYVLTIGNRRGICANRYNPCNRLNYQNEKIDDNNYKYTKEKEPYFCSSYDALGA 362
QDML+GLYVLT+GN RGICANRYNP NR NYQNE+IDDNNYKYTKEKEPYFCSSYDALGA
Sbjct: 533 QDMLIGLYVLTMGNHRGICANRYNPWNRRNYQNERIDDNNYKYTKEKEPYFCSSYDALGA 592
Query: 363 YRQKRINLDSPLWLRWRLDQRVIGSREVPIEVQYDSFGTYHEIYGHYLIVRSVKKETLCI 542
YRQKRINLDSPLWLRWRLDQRVI SREVPIEVQY+S GTYHEIYGHYLIVRSVKK+ LCI
Sbjct: 593 YRQKRINLDSPLWLRWRLDQRVIASREVPIEVQYESLGTYHEIYGHYLIVRSVKKKILCI 652
Query: 543 YIRTTVGHISFYREIEEAIQGFCRASSYGT 632
YIRTTVGHISFYREIEEA+QGF RA SYGT
Sbjct: 653 YIRTTVGHISFYREIEEAVQGFYRARSYGT 682
>ADD31173.1 RNA polymerase beta' subunit protein (chloroplast) [Berberidopsis
corallina]
Length = 682
Score = 400 bits (1028), Expect = e-133
Identities = 191/210 (90%), Positives = 199/210 (94%)
Frame = +3
Query: 3 GRAICLYPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISIPT 182
GRAICL+PLV KGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPIS+PT
Sbjct: 473 GRAICLHPLVRKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISVPT 532
Query: 183 QDMLMGLYVLTIGNRRGICANRYNPCNRLNYQNEKIDDNNYKYTKEKEPYFCSSYDALGA 362
QDML+GLYVLT GNRRGICANRYNPCNR NYQNE+IDDNNYKYTKEKEP+FC+SYDA+GA
Sbjct: 533 QDMLIGLYVLTSGNRRGICANRYNPCNRRNYQNERIDDNNYKYTKEKEPFFCNSYDAIGA 592
Query: 363 YRQKRINLDSPLWLRWRLDQRVIGSREVPIEVQYDSFGTYHEIYGHYLIVRSVKKETLCI 542
YRQKRINLDSPLWLRWRLDQRVI SRE PIEV Y+S GTYHEIYGHYLIVRSVKKE L I
Sbjct: 593 YRQKRINLDSPLWLRWRLDQRVIASREAPIEVHYESLGTYHEIYGHYLIVRSVKKEILFI 652
Query: 543 YIRTTVGHISFYREIEEAIQGFCRASSYGT 632
YIRTTVGHIS YREIEEAIQGFCRA SYGT
Sbjct: 653 YIRTTVGHISLYREIEEAIQGFCRACSYGT 682
>YP_005296091.1 rpoC1 gene product (chloroplast) [Pentactina rupicola] AEX31724.1 RNA
polymerase beta I subunit (chloroplast) [Pentactina
rupicola]
Length = 682
Score = 400 bits (1028), Expect = e-133
Identities = 186/210 (88%), Positives = 200/210 (95%)
Frame = +3
Query: 3 GRAICLYPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISIPT 182
G AICL+PLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPIS+PT
Sbjct: 473 GHAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISVPT 532
Query: 183 QDMLMGLYVLTIGNRRGICANRYNPCNRLNYQNEKIDDNNYKYTKEKEPYFCSSYDALGA 362
QDML+GLYVLT GNRRGICANRYNPC+R NYQN++IDDNNYKYTKEKEP+FC+SYDA+GA
Sbjct: 533 QDMLIGLYVLTSGNRRGICANRYNPCHRRNYQNKRIDDNNYKYTKEKEPFFCNSYDAIGA 592
Query: 363 YRQKRINLDSPLWLRWRLDQRVIGSREVPIEVQYDSFGTYHEIYGHYLIVRSVKKETLCI 542
YRQKRINLDSPLWLRWRLDQRVI SRE PIEV Y+S GTYHEIYGHYL+VRS+KKE +CI
Sbjct: 593 YRQKRINLDSPLWLRWRLDQRVITSRETPIEVHYESLGTYHEIYGHYLLVRSIKKEIICI 652
Query: 543 YIRTTVGHISFYREIEEAIQGFCRASSYGT 632
Y+RTTVGHIS YREIEEAIQGFCRA SYGT
Sbjct: 653 YVRTTVGHISLYREIEEAIQGFCRAYSYGT 682