BLASTX nr result

ID: Papaver32_contig00043314 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver32_contig00043314
         (512 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_019188490.1 PREDICTED: transcription factor PIF1-like [Ipomoe...    63   2e-08
ALI87040.1 phytochrome interacting factor 1 [Catharanthus roseus]      59   6e-07
XP_008382661.1 PREDICTED: transcription factor PIF1-like [Malus ...    55   9e-06

>XP_019188490.1 PREDICTED: transcription factor PIF1-like [Ipomoea nil]
          Length = 537

 Score = 62.8 bits (151), Expect = 2e-08
 Identities = 35/76 (46%), Positives = 53/76 (69%), Gaps = 3/76 (3%)
 Frame = +1

Query: 268 CVPDFEVEEDQQLIPSA-SSSGLHRPPNNKPSKHGGDELVELLWENGQLV--NQNHKSLR 438
           CVPDF+++ED  L P+A SSSGL R   +K S  G ++++ELLW+NGQ+V  +QNH+S  
Sbjct: 4   CVPDFDMDEDFNLPPTATSSSGLTR---HKKSAMGEEDIMELLWQNGQVVVHSQNHRSFH 60

Query: 439 KKTHHNSNSKYPYQSP 486
            K+H + ++  P + P
Sbjct: 61  -KSHFSGDAAIPAEQP 75


>ALI87040.1 phytochrome interacting factor 1 [Catharanthus roseus]
          Length = 564

 Score = 58.5 bits (140), Expect = 6e-07
 Identities = 32/84 (38%), Positives = 51/84 (60%), Gaps = 2/84 (2%)
 Frame = +1

Query: 256 MNRWCVPDFEVEEDQQLIPSASSSGLHRPPNNKPSKHGGDELVELLWENGQLV--NQNHK 429
           MN  CVPDF++++D   IP+ SSS L+R   +K +  G ++++ELLW++GQ+V  +QN +
Sbjct: 1   MNHHCVPDFDMDDDYS-IPTTSSSSLNR---SKKTPMGDEDIMELLWQDGQVVVQSQNQR 56

Query: 430 SLRKKTHHNSNSKYPYQSPEDDFG 501
           S +K     S  + P Q      G
Sbjct: 57  SFKKSPVGGSEGEIPTQQQSSAAG 80


>XP_008382661.1 PREDICTED: transcription factor PIF1-like [Malus domestica]
          Length = 307

 Score = 54.7 bits (130), Expect = 9e-06
 Identities = 35/82 (42%), Positives = 50/82 (60%), Gaps = 4/82 (4%)
 Frame = +1

Query: 268 CVPDFEVEEDQQLIPSASSSGLHRPPNNKPSKHGGDELVELLWENGQLV--NQNHKSL-- 435
           CVPDFE+++D  L    +SS L+RP   + S    D+++ELLW+NGQ+V  NQN +S   
Sbjct: 4   CVPDFEMDDDYSL---PTSSALNRP---RKSTMPEDDVMELLWQNGQVVMQNQNQRSAVN 57

Query: 436 RKKTHHNSNSKYPYQSPEDDFG 501
            K++H    SKY    P+D  G
Sbjct: 58  SKRSH---QSKYDVVLPDDGXG 76


Top