BLASTX nr result

ID: Papaver32_contig00041221 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver32_contig00041221
         (465 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

OMP07545.1 hypothetical protein COLO4_07245 [Corchorus olitorius]      56   2e-06
KMT10355.1 hypothetical protein BVRB_5g121040 [Beta vulgaris sub...    56   2e-06
AIK35195.1 LINE-type retrotransposon LIb DNA [Ipomoea batatas]         56   3e-06
OMO79365.1 hypothetical protein CCACVL1_13717 [Corchorus capsula...    55   5e-06

>OMP07545.1 hypothetical protein COLO4_07245 [Corchorus olitorius]
          Length = 664

 Score = 56.2 bits (134), Expect = 2e-06
 Identities = 28/79 (35%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
 Frame = +2

Query: 215 WKFSLIGRLDLLRVKFSEAVLNLKSQWKLEGQCKVIPLGKGFFTIKLDNELD*NYI-KDG 391
           W++SLI ++   +V +   V  ++  WK++ Q  V+ LG+ FF +K  NE D +Y+ K G
Sbjct: 52  WQWSLIVKVYGKKVGYKYLVSRIEQLWKIKKQPAVVDLGEDFFLLKFQNEEDCSYVLKKG 111

Query: 392 KWEVLHQDLWIRNWIPNFR 448
            W +    L +R W PNF+
Sbjct: 112 PWFIGGHFLTVRKWEPNFK 130


>KMT10355.1 hypothetical protein BVRB_5g121040 [Beta vulgaris subsp. vulgaris]
          Length = 724

 Score = 56.2 bits (134), Expect = 2e-06
 Identities = 32/84 (38%), Positives = 48/84 (57%), Gaps = 3/84 (3%)
 Frame = +2

Query: 215 WKFSLIGRLDLLRVKFSEAVLN--LKSQWKLEGQCKVIPLGKGFFTIKL-DNELD*NYIK 385
           W+++LI ++  L   FS+  L   LK  WK  G  + IPLGKGFFT+K   +E     I 
Sbjct: 144 WQYALICKI--LGRTFSQDFLQKELKKLWKWSGIMETIPLGKGFFTVKCSSHEQRTAIIT 201

Query: 386 DGKWEVLHQDLWIRNWIPNFRPEN 457
           DG W +++  + ++ W P F+P N
Sbjct: 202 DGPWFLMNHLVSVQQWTPGFQPSN 225


>AIK35195.1 LINE-type retrotransposon LIb DNA [Ipomoea batatas]
          Length = 1836

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 29/83 (34%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
 Frame = +2

Query: 206 CSAWKFSLIGRLDLLRVKFSEAVLNLKSQWKLEGQCKVIPLGKGFFTIKLDNELD-*NYI 382
           CSAWK +LI +     + F+     L + W L+G+  +I LG G F  + DN+ D  + +
Sbjct: 96  CSAWKMALIIKYLGKSIHFNVLNQRLPAIWNLQGKMTLIDLGYGCFVARFDNKNDYLHAL 155

Query: 383 KDGKWEVLHQDLWIRNWIPNFRP 451
            DG W++    L  + W+P FRP
Sbjct: 156 IDGPWKIFGNYLVTQRWVPEFRP 178


>OMO79365.1 hypothetical protein CCACVL1_13717 [Corchorus capsularis]
          Length = 362

 Score = 55.1 bits (131), Expect = 5e-06
 Identities = 32/96 (33%), Positives = 49/96 (51%), Gaps = 4/96 (4%)
 Frame = +2

Query: 176 IDLIQGTDDRCSA---WKFSLIGRLDLLRVKFSEAVLNLKSQWKLEGQCKVIPLGKGFFT 346
           + L   T+DR      W  SLI ++   +V +      LK  W+++ Q  ++ LG  FF 
Sbjct: 84  LSLTLSTEDRNRIRDWWSLSLIVKVFGKKVGYRFLASKLKDLWEIQKQPLIVDLGNEFFM 143

Query: 347 IKLDNELD*NY-IKDGKWEVLHQDLWIRNWIPNFRP 451
           +K  +  D N+ IK+G W +    L +R W PNFRP
Sbjct: 144 LKFHSAEDLNFVIKEGPWFIAGHFLTMRKWEPNFRP 179


Top