BLASTX nr result

ID: Papaver32_contig00040509 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver32_contig00040509
         (743 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_018445685.1 PREDICTED: LOW QUALITY PROTEIN: protein RNA-direc...    60   7e-07

>XP_018445685.1 PREDICTED: LOW QUALITY PROTEIN: protein RNA-directed DNA methylation
            3 [Raphanus sativus]
          Length = 1496

 Score = 60.5 bits (145), Expect = 7e-07
 Identities = 61/253 (24%), Positives = 87/253 (34%), Gaps = 16/253 (6%)
 Frame = +2

Query: 5    SSWGKPSLVDKAGDDKQNEVGNWGNST----DXXXXXXXXXXXXXXXXXXWGKQQNES-G 169
            +SWGKP+  + +       VG WG+++    +                  WGK    S G
Sbjct: 718  NSWGKPAAPEAS------TVGAWGDASAPKGEASWGKEGASTSNVEDLGSWGKHGGSSDG 771

Query: 170  SQKDSWSTKTDLPDIIDKGKDVAATEEGNWGKVVESHN----ASNTDCWNTAAGKQTXXX 337
            + KD  ST   L +   + K     EE +WGK   S +     +    W    G  +   
Sbjct: 772  NNKDDDSTWGKLVEESSQKK-----EESSWGKKTGSDSDLGKGNGESTWGNKDGNSSASN 826

Query: 338  XXXXXXXXQPKGEPGDQAGS-WDKVND--TSGGKEKQKV---GFGVWGA-DNWNKXXXXX 496
                    Q KG  G+Q GS W K +D  +S GK+   +   G   WG  D+        
Sbjct: 827  KDGVSWGKQDKGSDGNQGGSSWGKKDDGGSSWGKKNDSIKDDGGSSWGKKDDGGSTWGKK 886

Query: 497  XXXXXXWGKWNFADKEAGDKEGNQQDXXXXXXXXXXXXXXXXXXXXXDNFGGGRSSGWGQ 676
                  WGK N   K+AG     ++D                     +       S WGQ
Sbjct: 887  DEGGSSWGKKNDGIKDAGGSSWGKKDDGGSTWGKKDDGGSAWGNKVDEVIKDDGGSAWGQ 946

Query: 677  SHVTNKDEGDKPW 715
                 KD+G   W
Sbjct: 947  KVDATKDDGGSSW 959


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