BLASTX nr result

ID: Papaver32_contig00040353 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver32_contig00040353
         (902 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

YP_009235040.1 hypothetical chloroplast RF1 (chloroplast) [Papav...    50   2e-08

>YP_009235040.1 hypothetical chloroplast RF1 (chloroplast) [Papaver somniferum]
            AMD08758.1 hypothetical chloroplast RF1 (chloroplast)
            [Papaver somniferum]
          Length = 1784

 Score = 50.1 bits (118), Expect(3) = 2e-08
 Identities = 22/27 (81%), Positives = 24/27 (88%)
 Frame = -3

Query: 81   EDLSYLAIDKQINASSGRNSFFDWMGM 1
            +DLSYLAIDKQI  SSG+N FFDWMGM
Sbjct: 1377 KDLSYLAIDKQIKPSSGKNFFFDWMGM 1403



 Score = 31.6 bits (70), Expect(3) = 2e-08
 Identities = 13/23 (56%), Positives = 19/23 (82%)
 Frame = -2

Query: 148  IDGDTRIYKNTKNGINYSSVIDR 80
            +D +TR+ KNTK GINY S+I++
Sbjct: 1351 MDTETRMDKNTKTGINYYSIINQ 1373



 Score = 25.0 bits (53), Expect(3) = 2e-08
 Identities = 9/10 (90%), Positives = 10/10 (100%)
 Frame = -1

Query: 185  KKIDVEAWAN 156
            KKID+EAWAN
Sbjct: 1341 KKIDIEAWAN 1350


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