BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver32_contig00033656
         (2575 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_010273705.1 PREDICTED: DNA-directed RNA polymerase 3, chlorop...  1388   0.0  
OAY31446.1 hypothetical protein MANES_14G112700 [Manihot esculenta]  1321   0.0  
XP_017983278.1 PREDICTED: DNA-directed RNA polymerase 3, chlorop...  1318   0.0  
XP_002274521.1 PREDICTED: DNA-directed RNA polymerase 3, chlorop...  1318   0.0  
XP_016690334.1 PREDICTED: DNA-directed RNA polymerase 3, chlorop...  1315   0.0  
KJB53874.1 hypothetical protein B456_009G009300 [Gossypium raimo...  1315   0.0  
XP_016690333.1 PREDICTED: DNA-directed RNA polymerase 3, chlorop...  1315   0.0  
XP_012445978.1 PREDICTED: DNA-directed RNA polymerase 3, chlorop...  1315   0.0  
EOY31496.1 DNA/RNA polymerases superfamily protein isoform 1 [Th...  1314   0.0  
XP_017615868.1 PREDICTED: DNA-directed RNA polymerase 3, chlorop...  1311   0.0  
XP_006474044.1 PREDICTED: DNA-directed RNA polymerase 3, chlorop...  1311   0.0  
XP_002325119.1 DNA-directed RNA polymerase family protein [Popul...  1310   0.0  
KDO62286.1 hypothetical protein CISIN_1g001795mg [Citrus sinensi...  1309   0.0  
EOY31497.1 DNA/RNA polymerases superfamily protein isoform 2 [Th...  1309   0.0  
XP_011018068.1 PREDICTED: DNA-directed RNA polymerase 3, chlorop...  1309   0.0  
XP_009366215.1 PREDICTED: DNA-directed RNA polymerase 3, chlorop...  1309   0.0  
XP_016750005.1 PREDICTED: DNA-directed RNA polymerase 3, chlorop...  1308   0.0  
KDO62285.1 hypothetical protein CISIN_1g001795mg [Citrus sinensis]   1308   0.0  
APR64221.1 DNA-directed RNA polymerase family protein [Populus t...  1308   0.0  
XP_006453566.1 hypothetical protein CICLE_v10007333mg [Citrus cl...  1303   0.0  

>XP_010273705.1 PREDICTED: DNA-directed RNA polymerase 3, chloroplastic isoform X1
            [Nelumbo nucifera]
          Length = 956

 Score = 1388 bits (3593), Expect = 0.0
 Identities = 681/862 (79%), Positives = 764/862 (88%), Gaps = 4/862 (0%)
 Frame = +1

Query: 1    ILSNPNLKKQSLSSDGDGDD---RVAKKKKYDSLRRRQIKMETEAWEKMAQEYRDLQREM 171
            +LS  NLK       GDG+    R  +K+KY++LRRRQIK+ETEAWEK A EYR+L+REM
Sbjct: 88   VLSARNLKGLE-EGFGDGERGRLRDMEKRKYNALRRRQIKVETEAWEKTAAEYRELEREM 146

Query: 172  LEKKLAPNLPYVKSLFLGWFESLRDAIAKDQILQESKKQKAAYANQIGLLPADKMAVIVM 351
             EKKLAPNLPYVKSLFLGWFE LR+AI K+Q LQESKKQKAAYA  IGLLPADKMAVIVM
Sbjct: 147  CEKKLAPNLPYVKSLFLGWFEPLREAIEKEQKLQESKKQKAAYAPYIGLLPADKMAVIVM 206

Query: 352  HKVMGLLMTGHEDGCVRVVQAAVHIGEAVEQEVRIHTFLENSKNYRRGRRNEIDKDEALI 531
            HK+MGLLMTG E+G VRVVQAAVHIGEA+EQEVRIH FL+ +K Y+ G++ E   D+ + 
Sbjct: 207  HKMMGLLMTGQEEGYVRVVQAAVHIGEAIEQEVRIHNFLKKTKKYQGGKKIEGQGDDKVT 266

Query: 532  KEQAILRKRVNTLIKKQKVIEAQRLVTNE-ESMSWGRDAQAKLGSRLLELLTETAFVHPP 708
            KEQ ILRKRVN L+KK+K+IE Q+LV NE E   WGRDAQAKLGSRL+ELLTETA+V PP
Sbjct: 267  KEQDILRKRVNILVKKKKLIEVQKLVKNENEIRPWGRDAQAKLGSRLIELLTETAYVQPP 326

Query: 709  INQLADSPPDIRPAFRHTLKTIRKGSGPGCGKRYGVIECDELVHKGLDGTVRHMEMSYMP 888
            INQL DSP +IRPAFRHT +T+ K +G   GKRYGVIECD LV +GLD T RHM + Y+P
Sbjct: 327  INQLGDSPREIRPAFRHTFRTLSKETGRRVGKRYGVIECDPLVGRGLDRTARHMVIPYVP 386

Query: 889  MLIPPKKWKGYQTGGHLFLPSYVMRTHGARQQQEAVKSVPRKQMQRVFEALDTLGRTKWR 1068
            MLIPPKKWKGY  GGHLFLPSYVMRTHGA++QQ+A+K+VP KQMQ+VFEALDTLGRTKWR
Sbjct: 387  MLIPPKKWKGYDKGGHLFLPSYVMRTHGAKRQQDAIKNVPGKQMQKVFEALDTLGRTKWR 446

Query: 1069 VNKRVLEVIEAVWARGGNVAGLVDREDLLIPEEPHSDDAIEIQKWKWSVSKAKKCNRERH 1248
            VN++VL V+E++WARGGN+AGLVDRED+ IPE+P S+D IE+QKWKW++ K KK NRERH
Sbjct: 447  VNRKVLGVVESIWARGGNMAGLVDREDIPIPEKPDSEDLIEMQKWKWNMRKTKKINRERH 506

Query: 1249 AQRCDIELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHSHLNHLSSDLCRGVLEFAEGRP 1428
            AQRCDIELKLSVARK+KDEEGFYYPHNLDFRGRAYPMH HLNHLSSDLCRGVLEFAEGRP
Sbjct: 507  AQRCDIELKLSVARKIKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRP 566

Query: 1429 LGKAGLRWLKIHLANLYAGGVDKLPYEERVMFVDNHLDDILDSAQRTIDGKRWWLSAEDP 1608
            LGKAGLRWLKIHLANLYAGGVDKL Y++R+ FV+NHLDDI DSA + IDG RWWL+AEDP
Sbjct: 567  LGKAGLRWLKIHLANLYAGGVDKLSYDDRLDFVENHLDDIFDSADKPIDGNRWWLNAEDP 626

Query: 1609 FQCLAACMNLSDSLRSSSPYTVISHLPIHQDGSCNGLQHYAALGRDSLEAAAVNLIAGER 1788
            FQCLAAC+NLS++L+SSSP+T ISHLPIHQDGSCNGLQHYAALGR  LEAAAVNL+AGE+
Sbjct: 627  FQCLAACINLSEALKSSSPHTAISHLPIHQDGSCNGLQHYAALGRYQLEAAAVNLVAGEK 686

Query: 1789 PADVYSEIAARVHDIMKRDCSKDPATHSAARLANLLIDQVDRKLVKQTVMTSVYGVTYVG 1968
            PADVYSEIAARVH IMK D  KDP T   A LA +LIDQVDRKLVKQTVMTSVYGVTYVG
Sbjct: 687  PADVYSEIAARVHSIMKMDAEKDPTTDPTALLAKVLIDQVDRKLVKQTVMTSVYGVTYVG 746

Query: 1969 AREQIKRRLMERGNITDDRLLFSASCYAAKVTMTALGEMFQAARSIMGWLGDCAKIIASE 2148
            AREQIKRRL E+G+IT+DRLLFSA+CYAAKVT+TAL EMFQAARSIMGWL DCAK+IASE
Sbjct: 747  AREQIKRRLEEKGHITNDRLLFSAACYAAKVTLTALEEMFQAARSIMGWLSDCAKVIASE 806

Query: 2149 NEPVRWTTPLGLPVVQPYRKPERHLIRTSLQVLALQREGDSVDVKKQKSAFPPNFVHSLD 2328
            N+PVRWTTPLGLPVVQPY KP+RHL+RTSLQVLALQREGD V+VK+Q++AFPPNFVHSLD
Sbjct: 807  NQPVRWTTPLGLPVVQPYLKPQRHLVRTSLQVLALQREGDLVEVKRQRTAFPPNFVHSLD 866

Query: 2329 GSHMMMTAVACRDAGLHFAGVHDSFWTHACDVDKMNLILREKFVELYDMPILENLLESFQ 2508
            GSHMMMTAVACRDAGLHFAGVHDSFWTHACDVD+MN ILREKFVELYDMPILE LLESFQ
Sbjct: 867  GSHMMMTAVACRDAGLHFAGVHDSFWTHACDVDRMNQILREKFVELYDMPILERLLESFQ 926

Query: 2509 TSFPTLSFPPLPDRGDFDLENV 2574
             SFP L+FPPLPDRGDFDL+ V
Sbjct: 927  VSFPLLTFPPLPDRGDFDLKEV 948


>OAY31446.1 hypothetical protein MANES_14G112700 [Manihot esculenta]
          Length = 992

 Score = 1321 bits (3419), Expect = 0.0
 Identities = 634/835 (75%), Positives = 731/835 (87%)
 Frame = +1

Query: 70   KKKKYDSLRRRQIKMETEAWEKMAQEYRDLQREMLEKKLAPNLPYVKSLFLGWFESLRDA 249
            +K+KY+ LRRRQI+ ETEAWE+MA+EYR L REM E+KLAPNLPYVK LFLGWFE L++A
Sbjct: 151  EKRKYNLLRRRQIRQETEAWERMAEEYRSLVREMCERKLAPNLPYVKGLFLGWFEPLKEA 210

Query: 250  IAKDQILQESKKQKAAYANQIGLLPADKMAVIVMHKVMGLLMTGHEDGCVRVVQAAVHIG 429
            I K+Q LQ SKKQKAA+A  I LLPADKMAVIVMHK+MGLLM GHEDGC+ VVQAAV IG
Sbjct: 211  IKKEQNLQRSKKQKAAFAPHIELLPADKMAVIVMHKMMGLLMVGHEDGCIPVVQAAVKIG 270

Query: 430  EAVEQEVRIHTFLENSKNYRRGRRNEIDKDEALIKEQAILRKRVNTLIKKQKVIEAQRLV 609
             AVEQEVRIH FLE +KN++R ++   D  + L +E+ ILRKRVN LI+++++ E Q+LV
Sbjct: 271  MAVEQEVRIHNFLEKTKNFQRNKKTT-DAQQNLGREKEILRKRVNNLIRRKRLTEVQKLV 329

Query: 610  TNEESMSWGRDAQAKLGSRLLELLTETAFVHPPINQLADSPPDIRPAFRHTLKTIRKGSG 789
             NEE   WGRD QAKLGS L+ELLTETAFV PP+NQ ADSPPD+RPAFRH  KTI    G
Sbjct: 330  KNEEMKPWGRDTQAKLGSCLVELLTETAFVQPPVNQSADSPPDVRPAFRHRFKTITNNPG 389

Query: 790  PGCGKRYGVIECDELVHKGLDGTVRHMEMSYMPMLIPPKKWKGYQTGGHLFLPSYVMRTH 969
               GK+YGVIECD L+  GLDG+V HM + Y PML+PPKKWKGY  GGH FLPSY+MRTH
Sbjct: 390  QKIGKKYGVIECDPLILSGLDGSVNHMLIPYFPMLVPPKKWKGYDKGGHFFLPSYIMRTH 449

Query: 970  GARQQQEAVKSVPRKQMQRVFEALDTLGRTKWRVNKRVLEVIEAVWARGGNVAGLVDRED 1149
            G+R+QQ+A++ VP K MQ+V+EALDTLG TKWRVN+RVL V+E++WARGGNVAGLVDR D
Sbjct: 450  GSRKQQDALRRVPAKNMQKVYEALDTLGNTKWRVNRRVLNVVESIWARGGNVAGLVDRAD 509

Query: 1150 LLIPEEPHSDDAIEIQKWKWSVSKAKKCNRERHAQRCDIELKLSVARKMKDEEGFYYPHN 1329
            + +PE+P S+D  EIQ+W+WS+ KAKK NRERH+QRCD ELKLSVARK+KDEEGFYYPHN
Sbjct: 510  IPVPEKPLSEDLTEIQQWRWSMRKAKKINRERHSQRCDTELKLSVARKLKDEEGFYYPHN 569

Query: 1330 LDFRGRAYPMHSHLNHLSSDLCRGVLEFAEGRPLGKAGLRWLKIHLANLYAGGVDKLPYE 1509
            LDFRGRAYPMH HL HLSSDLCRG+LEFAEGRPLGK+GL WLKIHLANLY+GGV+KL +E
Sbjct: 570  LDFRGRAYPMHPHLTHLSSDLCRGILEFAEGRPLGKSGLHWLKIHLANLYSGGVEKLSHE 629

Query: 1510 ERVMFVDNHLDDILDSAQRTIDGKRWWLSAEDPFQCLAACMNLSDSLRSSSPYTVISHLP 1689
             R+ FV+NHLDDI DSA+  + G+ WWL+AEDPFQCLAAC+NLS++L+SSSP+TVISHLP
Sbjct: 630  GRLAFVENHLDDIFDSAENPVHGQCWWLTAEDPFQCLAACINLSEALKSSSPHTVISHLP 689

Query: 1690 IHQDGSCNGLQHYAALGRDSLEAAAVNLIAGERPADVYSEIAARVHDIMKRDCSKDPATH 1869
            IHQDGSCNGLQHYAALGR+SLEAAAVNL+AGE+PADVY+EIA RVH+++KRD SKDPAT+
Sbjct: 690  IHQDGSCNGLQHYAALGRNSLEAAAVNLVAGEKPADVYTEIALRVHELIKRDSSKDPATN 749

Query: 1870 SAARLANLLIDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLMERGNITDDRLLFSASCY 2049
              A LA LLIDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRL E+G+ITDDRLLFSA+CY
Sbjct: 750  PNAILAKLLIDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGHITDDRLLFSAACY 809

Query: 2050 AAKVTMTALGEMFQAARSIMGWLGDCAKIIASENEPVRWTTPLGLPVVQPYRKPERHLIR 2229
             AKVTMTALGE+FQAAR IM WLGDCAK+IASE++PVRWTTPLGLPV+QPY K ERHLIR
Sbjct: 810  TAKVTMTALGELFQAARDIMNWLGDCAKVIASEDQPVRWTTPLGLPVLQPYYKSERHLIR 869

Query: 2230 TSLQVLALQREGDSVDVKKQKSAFPPNFVHSLDGSHMMMTAVACRDAGLHFAGVHDSFWT 2409
            TSLQVLALQREG SV+V+KQ++AFPPNFVHSLDGSHMMMTAVACRDA L FAGVHDSFWT
Sbjct: 870  TSLQVLALQREGSSVEVRKQRTAFPPNFVHSLDGSHMMMTAVACRDADLRFAGVHDSFWT 929

Query: 2410 HACDVDKMNLILREKFVELYDMPILENLLESFQTSFPTLSFPPLPDRGDFDLENV 2574
            HA DVD MN ILREKFVELY  PILENLLE+FQTS+PTL FPPLP+RG+FDL+ V
Sbjct: 930  HASDVDLMNRILREKFVELYSTPILENLLENFQTSYPTLKFPPLPERGNFDLQEV 984


>XP_017983278.1 PREDICTED: DNA-directed RNA polymerase 3, chloroplastic [Theobroma
            cacao]
          Length = 978

 Score = 1318 bits (3412), Expect = 0.0
 Identities = 635/837 (75%), Positives = 740/837 (88%), Gaps = 2/837 (0%)
 Frame = +1

Query: 70   KKKKYDSLRRRQIKMETEAWEKMAQEYRDLQREMLEKKLAPNLPYVKSLFLGWFESLRDA 249
            +K+KY+ LRRRQ+K ETEAWEKM +EYR+LQREM EKKLAPNLPYVK LFLGWFE +R+A
Sbjct: 136  EKRKYNLLRRRQVKEETEAWEKMVEEYRELQREMCEKKLAPNLPYVKGLFLGWFEPMREA 195

Query: 250  IAKDQILQE--SKKQKAAYANQIGLLPADKMAVIVMHKVMGLLMTGHEDGCVRVVQAAVH 423
            IA++Q +Q+  SKK +AAYA  I LLPADKMAVIVMHK+MGL+M   EDG V+VVQAAVH
Sbjct: 196  IAREQKVQKGKSKKLRAAYAPHIELLPADKMAVIVMHKMMGLVMGAQEDGFVQVVQAAVH 255

Query: 424  IGEAVEQEVRIHTFLENSKNYRRGRRNEIDKDEALIKEQAILRKRVNTLIKKQKVIEAQR 603
            IG A+EQEVRIH FLE +KNY+R  +   D+ + L KE+ IL+KRVN+LI++++++E Q+
Sbjct: 256  IGVAIEQEVRIHNFLEKTKNYQR--KKTTDEVQGLSKEKEILKKRVNSLIRRRRLVEVQK 313

Query: 604  LVTNEESMSWGRDAQAKLGSRLLELLTETAFVHPPINQLADSPPDIRPAFRHTLKTIRKG 783
            LV NEE   WGRDAQAKLGSRLLELLTETA+V PPI+Q  DSPPD++PAFRH  KTI K 
Sbjct: 314  LVKNEEIKPWGRDAQAKLGSRLLELLTETAYVQPPIDQSGDSPPDVQPAFRHKFKTISKD 373

Query: 784  SGPGCGKRYGVIECDELVHKGLDGTVRHMEMSYMPMLIPPKKWKGYQTGGHLFLPSYVMR 963
             G    KRYGVIECD L+  GLD + +HM + Y+PML+PPKKWKGY  GG+LFLPSYVMR
Sbjct: 374  PGKKMMKRYGVIECDPLILSGLDRSAKHMLIPYVPMLVPPKKWKGYDKGGYLFLPSYVMR 433

Query: 964  THGARQQQEAVKSVPRKQMQRVFEALDTLGRTKWRVNKRVLEVIEAVWARGGNVAGLVDR 1143
            THG+R+QQ+A+K V  K+MQ+VFEALDTLG TKWRVNK+VL V+E++WA GGN+AGLVDR
Sbjct: 434  THGSRKQQDALKGVHVKKMQKVFEALDTLGSTKWRVNKKVLAVVESIWASGGNIAGLVDR 493

Query: 1144 EDLLIPEEPHSDDAIEIQKWKWSVSKAKKCNRERHAQRCDIELKLSVARKMKDEEGFYYP 1323
             D+ IPE+P S+D+ E Q+WKWSV KA K NRERH+QRCD ELKLSVARKM++EEGFYYP
Sbjct: 494  NDIPIPEKPSSEDSTESQEWKWSVRKANKINRERHSQRCDTELKLSVARKMENEEGFYYP 553

Query: 1324 HNLDFRGRAYPMHSHLNHLSSDLCRGVLEFAEGRPLGKAGLRWLKIHLANLYAGGVDKLP 1503
            HNLDFRGRAYPMH HLNHLSSDLCRGVLEFAEGRPLG++GL WLKIHLANL+AGGV+KL 
Sbjct: 554  HNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGRSGLHWLKIHLANLFAGGVEKLS 613

Query: 1504 YEERVMFVDNHLDDILDSAQRTIDGKRWWLSAEDPFQCLAACMNLSDSLRSSSPYTVISH 1683
            ++ R+ FVDNHLDDI DSA+  I+G RWWL+AEDPFQCLAAC+NLS+SL+SSSP++V+S+
Sbjct: 614  HDGRLAFVDNHLDDIFDSAENPINGNRWWLTAEDPFQCLAACINLSESLKSSSPHSVLSY 673

Query: 1684 LPIHQDGSCNGLQHYAALGRDSLEAAAVNLIAGERPADVYSEIAARVHDIMKRDCSKDPA 1863
            LPIHQDGSCNGLQHYAALGRDSLEAAAVNL+AGE+PADVYSEIA RVH+IMKRD  KDPA
Sbjct: 674  LPIHQDGSCNGLQHYAALGRDSLEAAAVNLVAGEKPADVYSEIAVRVHNIMKRDSDKDPA 733

Query: 1864 THSAARLANLLIDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLMERGNITDDRLLFSAS 2043
            T+  A LA LLIDQVDRKLVKQTVMTSVYGVT+VGAREQIKRRL E+G+ITDDR+LF+A+
Sbjct: 734  TNPNASLAKLLIDQVDRKLVKQTVMTSVYGVTFVGAREQIKRRLEEKGHITDDRVLFAAA 793

Query: 2044 CYAAKVTMTALGEMFQAARSIMGWLGDCAKIIASENEPVRWTTPLGLPVVQPYRKPERHL 2223
            CY AKVT+ ALGE+FQAAR+IMGWLGDCAK+IASEN+PV+WTTPLGLPVVQPY K ERHL
Sbjct: 794  CYTAKVTLAALGELFQAARNIMGWLGDCAKVIASENQPVQWTTPLGLPVVQPYYKSERHL 853

Query: 2224 IRTSLQVLALQREGDSVDVKKQKSAFPPNFVHSLDGSHMMMTAVACRDAGLHFAGVHDSF 2403
            IRTSLQVLALQREGDSV+V+KQ++AFPPNFVHSLDGSHMMMTAVACRDAGLHFAGVHDSF
Sbjct: 854  IRTSLQVLALQREGDSVEVRKQRTAFPPNFVHSLDGSHMMMTAVACRDAGLHFAGVHDSF 913

Query: 2404 WTHACDVDKMNLILREKFVELYDMPILENLLESFQTSFPTLSFPPLPDRGDFDLENV 2574
            WTHACDV+KMN ILREKFVELY MP+LENL ESFQTS+P+L FPPLP+RG+FDL  V
Sbjct: 914  WTHACDVEKMNQILREKFVELYSMPVLENLFESFQTSYPSLVFPPLPERGNFDLREV 970


>XP_002274521.1 PREDICTED: DNA-directed RNA polymerase 3, chloroplastic [Vitis
            vinifera]
          Length = 979

 Score = 1318 bits (3410), Expect = 0.0
 Identities = 632/838 (75%), Positives = 733/838 (87%)
 Frame = +1

Query: 61   RVAKKKKYDSLRRRQIKMETEAWEKMAQEYRDLQREMLEKKLAPNLPYVKSLFLGWFESL 240
            R  +++ Y  LRRRQ+K ETEAWE+M +EYR+++REM EKKLAPNLPYVK+LFLGWFE L
Sbjct: 136  RETERRNYGLLRRRQVKAETEAWERMVEEYREIEREMCEKKLAPNLPYVKALFLGWFEPL 195

Query: 241  RDAIAKDQILQESKKQKAAYANQIGLLPADKMAVIVMHKVMGLLMTGHEDGCVRVVQAAV 420
            R+AI K+Q  Q +KKQKAAYA  I LLPADKMAVIVMHK+MGL+M GHE+GCVRVVQAAV
Sbjct: 196  REAIDKEQRAQRTKKQKAAYAPHIELLPADKMAVIVMHKMMGLVMMGHEEGCVRVVQAAV 255

Query: 421  HIGEAVEQEVRIHTFLENSKNYRRGRRNEIDKDEALIKEQAILRKRVNTLIKKQKVIEAQ 600
             IG A+EQEVRIH+FLE +KN+ R +   +   +  ++E+ ILRKRV + I+K+K+IE Q
Sbjct: 256  QIGMAIEQEVRIHSFLEKTKNFERHKT--VGHSQEGLREKEILRKRVKSFIRKKKIIEVQ 313

Query: 601  RLVTNEESMSWGRDAQAKLGSRLLELLTETAFVHPPINQLADSPPDIRPAFRHTLKTIRK 780
            +LV NEE   WGRD QAKLGSRL+ELLTETA+V  P+NQ AD PPD+RPAFRHT KT+ K
Sbjct: 314  KLVKNEEITPWGRDTQAKLGSRLIELLTETAYVQTPVNQSADCPPDVRPAFRHTFKTVTK 373

Query: 781  GSGPGCGKRYGVIECDELVHKGLDGTVRHMEMSYMPMLIPPKKWKGYQTGGHLFLPSYVM 960
             SG    ++YGVIECD LV  GLD T +HM + Y+PMLIPPKKWKGY  GG+LFLPSYVM
Sbjct: 374  ESGQKDWRKYGVIECDPLVLIGLDRTAKHMVIPYVPMLIPPKKWKGYDKGGYLFLPSYVM 433

Query: 961  RTHGARQQQEAVKSVPRKQMQRVFEALDTLGRTKWRVNKRVLEVIEAVWARGGNVAGLVD 1140
            RTHG+R+QQ+AVKSVPR+Q+Q+VFEALDTLG TKWR+N+RVL V+E++WARGGN+ GLVD
Sbjct: 434  RTHGSRKQQDAVKSVPRRQLQKVFEALDTLGNTKWRINRRVLSVVESIWARGGNLGGLVD 493

Query: 1141 REDLLIPEEPHSDDAIEIQKWKWSVSKAKKCNRERHAQRCDIELKLSVARKMKDEEGFYY 1320
            RE++ +PE+P ++D  EIQ WKW+  KAKK N+ERH+ RCD E+KLSVARKMKDEEGFYY
Sbjct: 494  RENVPLPEKPSTEDLTEIQNWKWNARKAKKINQERHSLRCDTEIKLSVARKMKDEEGFYY 553

Query: 1321 PHNLDFRGRAYPMHSHLNHLSSDLCRGVLEFAEGRPLGKAGLRWLKIHLANLYAGGVDKL 1500
            PHNLDFRGRAYPMH HLNHLSSDLCRGVLEFAEGRPLGK+GLRWLKI LANLYAGGV+KL
Sbjct: 554  PHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGKSGLRWLKIQLANLYAGGVEKL 613

Query: 1501 PYEERVMFVDNHLDDILDSAQRTIDGKRWWLSAEDPFQCLAACMNLSDSLRSSSPYTVIS 1680
             Y+ R+ FVDNHLDD+ DSA   ++G RWWL+AEDPFQCLAAC+NLS++LRSSSP+TVIS
Sbjct: 614  SYDGRLAFVDNHLDDVFDSADNPLNGNRWWLTAEDPFQCLAACINLSEALRSSSPHTVIS 673

Query: 1681 HLPIHQDGSCNGLQHYAALGRDSLEAAAVNLIAGERPADVYSEIAARVHDIMKRDCSKDP 1860
            HLPIHQDGSCNGLQHYAALGR+SLEA+AVNL+AGE+PADVYSEIAARVH+IMKRD +KDP
Sbjct: 674  HLPIHQDGSCNGLQHYAALGRNSLEASAVNLVAGEKPADVYSEIAARVHEIMKRDSNKDP 733

Query: 1861 ATHSAARLANLLIDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLMERGNITDDRLLFSA 2040
            AT   A LA +LI QVDRKLVKQTVMTSVYGVTY+GAREQIKRRL E+G ITD+RLLF+A
Sbjct: 734  ATDPKALLAKVLIGQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLAEKGLITDERLLFTA 793

Query: 2041 SCYAAKVTMTALGEMFQAARSIMGWLGDCAKIIASENEPVRWTTPLGLPVVQPYRKPERH 2220
            +CYAAKVT+ ALGE+FQAAR IM WLG+CAK+IASEN+PV+WTTPLGLPV+QPY K ERH
Sbjct: 794  ACYAAKVTLAALGEIFQAARDIMAWLGECAKVIASENQPVQWTTPLGLPVIQPYCKSERH 853

Query: 2221 LIRTSLQVLALQREGDSVDVKKQKSAFPPNFVHSLDGSHMMMTAVACRDAGLHFAGVHDS 2400
            LIRTSLQVLALQREG  V ++KQ++AFPPNFVHSLDGSHMMMTAVACRDAGL FAGVHDS
Sbjct: 854  LIRTSLQVLALQREGSVVVIRKQRTAFPPNFVHSLDGSHMMMTAVACRDAGLCFAGVHDS 913

Query: 2401 FWTHACDVDKMNLILREKFVELYDMPILENLLESFQTSFPTLSFPPLPDRGDFDLENV 2574
            FWTHACDVDKMN ILREKFVELY MPILENLLESFQTS PTL+FPPLPDRG+FDL  V
Sbjct: 914  FWTHACDVDKMNQILREKFVELYSMPILENLLESFQTSHPTLTFPPLPDRGNFDLREV 971


>XP_016690334.1 PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like isoform
            X2 [Gossypium hirsutum]
          Length = 972

 Score = 1315 bits (3404), Expect = 0.0
 Identities = 632/837 (75%), Positives = 742/837 (88%), Gaps = 2/837 (0%)
 Frame = +1

Query: 70   KKKKYDSLRRRQIKMETEAWEKMAQEYRDLQREMLEKKLAPNLPYVKSLFLGWFESLRDA 249
            +K+KY+ LRRRQ+K ETEAWEKM +EYR+L+REM EKKLAPNLPYVK LFLGWFE LR+A
Sbjct: 130  EKRKYNLLRRRQVKEETEAWEKMVEEYRELEREMCEKKLAPNLPYVKGLFLGWFEPLREA 189

Query: 250  IAKDQILQESKKQK--AAYANQIGLLPADKMAVIVMHKVMGLLMTGHEDGCVRVVQAAVH 423
            IAK+Q +Q+ K +K  AAYA  I LLPADK+AVIVMHK+MGL+M   EDG V+VVQAAVH
Sbjct: 190  IAKEQKVQKGKNKKLRAAYAPHIELLPADKLAVIVMHKMMGLVMGAEEDGYVQVVQAAVH 249

Query: 424  IGEAVEQEVRIHTFLENSKNYRRGRRNEIDKDEALIKEQAILRKRVNTLIKKQKVIEAQR 603
            IG A+EQEVRIH+FLE +KNY+R  +  +D+ +   KE+ ILRKRVN+LI+++++ E Q+
Sbjct: 250  IGVAIEQEVRIHSFLEKTKNYQR--KQIVDEVQGASKEKEILRKRVNSLIRRRRLTEVQK 307

Query: 604  LVTNEESMSWGRDAQAKLGSRLLELLTETAFVHPPINQLADSPPDIRPAFRHTLKTIRKG 783
            LV NEE   WGRDAQAKLGSRLLELLTETA+V PPI+Q  DSP D+RPAFRH  KTI +G
Sbjct: 308  LVKNEEIKPWGRDAQAKLGSRLLELLTETAYVQPPIDQSGDSPLDVRPAFRHKFKTISRG 367

Query: 784  SGPGCGKRYGVIECDELVHKGLDGTVRHMEMSYMPMLIPPKKWKGYQTGGHLFLPSYVMR 963
             G    KRYGVIECD L+  GLD + +HM + Y+PML+PPKKWKGY  GG+LFLPSYVMR
Sbjct: 368  PGQKIKKRYGVIECDPLIRSGLDKSAKHMMIPYVPMLVPPKKWKGYDKGGYLFLPSYVMR 427

Query: 964  THGARQQQEAVKSVPRKQMQRVFEALDTLGRTKWRVNKRVLEVIEAVWARGGNVAGLVDR 1143
            THG+R+QQEA+K V  K M++VFEALDTLG TKWRVN +VL V+E++WA GGN+AGLVDR
Sbjct: 428  THGSRKQQEALKGVNVKNMRKVFEALDTLGSTKWRVNNKVLAVVESIWASGGNIAGLVDR 487

Query: 1144 EDLLIPEEPHSDDAIEIQKWKWSVSKAKKCNRERHAQRCDIELKLSVARKMKDEEGFYYP 1323
             D+ IPE+P+S+D+ EIQ+WKWSV KA K NRERH+QRCD ELKLSVARKM++EEGFYYP
Sbjct: 488  NDIPIPEKPYSEDSTEIQEWKWSVRKANKVNRERHSQRCDTELKLSVARKMENEEGFYYP 547

Query: 1324 HNLDFRGRAYPMHSHLNHLSSDLCRGVLEFAEGRPLGKAGLRWLKIHLANLYAGGVDKLP 1503
            HNLDFRGRAYPMH HLNHLSSDLCRGVLEFAEGRPLG++GL WLKIHLANLY+GGV+KL 
Sbjct: 548  HNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGRSGLHWLKIHLANLYSGGVEKLS 607

Query: 1504 YEERVMFVDNHLDDILDSAQRTIDGKRWWLSAEDPFQCLAACMNLSDSLRSSSPYTVISH 1683
            ++ R+ FVDNHLD+I DSA+  I+G RWWL+AEDPFQCLAACMNLS++L+S+SP+++IS+
Sbjct: 608  HDGRLAFVDNHLDEIFDSAENPINGNRWWLTAEDPFQCLAACMNLSEALKSTSPHSMISY 667

Query: 1684 LPIHQDGSCNGLQHYAALGRDSLEAAAVNLIAGERPADVYSEIAARVHDIMKRDCSKDPA 1863
            LPIHQDGSCNGLQHYAALGRD+LEAAAVNL+AGE+PADVYSEIA RVH+IMKRD +KDPA
Sbjct: 668  LPIHQDGSCNGLQHYAALGRDNLEAAAVNLVAGEKPADVYSEIAVRVHNIMKRDSNKDPA 727

Query: 1864 THSAARLANLLIDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLMERGNITDDRLLFSAS 2043
            T+  A LA LLIDQVDRKLVKQTVMTSVYGVT+VGAREQIKRRL E+G+ITDDRLLFSA+
Sbjct: 728  TNPNALLAKLLIDQVDRKLVKQTVMTSVYGVTFVGAREQIKRRLEEKGHITDDRLLFSAA 787

Query: 2044 CYAAKVTMTALGEMFQAARSIMGWLGDCAKIIASENEPVRWTTPLGLPVVQPYRKPERHL 2223
            CY AKVT+ ALGE+FQAAR+IMGWLGDCAK+IASEN+PVRWTTPLGLPVVQPY K ERHL
Sbjct: 788  CYTAKVTLAALGELFQAARNIMGWLGDCAKVIASENQPVRWTTPLGLPVVQPYYKSERHL 847

Query: 2224 IRTSLQVLALQREGDSVDVKKQKSAFPPNFVHSLDGSHMMMTAVACRDAGLHFAGVHDSF 2403
            IRT+LQVLALQREG+SV+V+KQ++AFPPNFVHSLDGSHMMMTAVACRDAGL+FAGVHDSF
Sbjct: 848  IRTTLQVLALQREGNSVEVRKQRTAFPPNFVHSLDGSHMMMTAVACRDAGLYFAGVHDSF 907

Query: 2404 WTHACDVDKMNLILREKFVELYDMPILENLLESFQTSFPTLSFPPLPDRGDFDLENV 2574
            WTHACDV+KMN ILREKFVELY MP+LENLLESF+TS+PTL FPPLP+RG+FDL+ V
Sbjct: 908  WTHACDVEKMNQILREKFVELYSMPVLENLLESFETSYPTLVFPPLPERGNFDLQTV 964


>KJB53874.1 hypothetical protein B456_009G009300 [Gossypium raimondii]
          Length = 972

 Score = 1315 bits (3404), Expect = 0.0
 Identities = 632/837 (75%), Positives = 742/837 (88%), Gaps = 2/837 (0%)
 Frame = +1

Query: 70   KKKKYDSLRRRQIKMETEAWEKMAQEYRDLQREMLEKKLAPNLPYVKSLFLGWFESLRDA 249
            +K+KY+ LRRRQ+K ETEAWEKM +EYR+L+REM EKKLAPNLPYVK LFLGWFE LR+A
Sbjct: 130  EKRKYNLLRRRQVKEETEAWEKMVEEYRELEREMCEKKLAPNLPYVKGLFLGWFEPLREA 189

Query: 250  IAKDQILQESKKQK--AAYANQIGLLPADKMAVIVMHKVMGLLMTGHEDGCVRVVQAAVH 423
            IAK+Q +Q+ K +K  AAYA  I LLPADK+AVIVMHK+MGL+M   EDG V+VVQAAVH
Sbjct: 190  IAKEQKVQKGKNKKLRAAYAPHIELLPADKLAVIVMHKMMGLVMGAEEDGYVQVVQAAVH 249

Query: 424  IGEAVEQEVRIHTFLENSKNYRRGRRNEIDKDEALIKEQAILRKRVNTLIKKQKVIEAQR 603
            IG A+EQEVRIH+FLE +KNY+R  +  +D+ +   KE+ ILRKRVN+LI+++++ E Q+
Sbjct: 250  IGVAIEQEVRIHSFLEKTKNYQR--KQIVDEVQGASKEKEILRKRVNSLIRRRRLTEVQK 307

Query: 604  LVTNEESMSWGRDAQAKLGSRLLELLTETAFVHPPINQLADSPPDIRPAFRHTLKTIRKG 783
            LV NEE   WGRDAQAKLGSRLLELLTETA+V PPI+Q  DSP D+RPAFRH  KTI +G
Sbjct: 308  LVKNEEIKPWGRDAQAKLGSRLLELLTETAYVQPPIDQSGDSPLDVRPAFRHKFKTISRG 367

Query: 784  SGPGCGKRYGVIECDELVHKGLDGTVRHMEMSYMPMLIPPKKWKGYQTGGHLFLPSYVMR 963
             G    KRYGVIECD L+  GLD + +HM + Y+PML+PPKKWKGY  GG+LFLPSYVMR
Sbjct: 368  PGQKIKKRYGVIECDPLIRSGLDKSAKHMMIPYVPMLVPPKKWKGYDKGGYLFLPSYVMR 427

Query: 964  THGARQQQEAVKSVPRKQMQRVFEALDTLGRTKWRVNKRVLEVIEAVWARGGNVAGLVDR 1143
            THG+R+QQEA+K V  K M++VFEALDTLG TKWRVN +VL V+E++WA GGN+AGLVDR
Sbjct: 428  THGSRKQQEALKGVNVKNMRKVFEALDTLGSTKWRVNNKVLAVVESIWASGGNIAGLVDR 487

Query: 1144 EDLLIPEEPHSDDAIEIQKWKWSVSKAKKCNRERHAQRCDIELKLSVARKMKDEEGFYYP 1323
             D+ IPE+P+S+D+ EIQ+WKWSV KA K NRERH+QRCD ELKLSVARKM++EEGFYYP
Sbjct: 488  NDIPIPEKPYSEDSTEIQEWKWSVRKANKVNRERHSQRCDTELKLSVARKMENEEGFYYP 547

Query: 1324 HNLDFRGRAYPMHSHLNHLSSDLCRGVLEFAEGRPLGKAGLRWLKIHLANLYAGGVDKLP 1503
            HNLDFRGRAYPMH HLNHLSSDLCRGVLEFAEGRPLG++GL WLKIHLANLY+GGV+KL 
Sbjct: 548  HNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGRSGLHWLKIHLANLYSGGVEKLS 607

Query: 1504 YEERVMFVDNHLDDILDSAQRTIDGKRWWLSAEDPFQCLAACMNLSDSLRSSSPYTVISH 1683
            ++ R+ FVDNHLD+I DSA+  I+G RWWL+AEDPFQCLAACMNLS++L+S+SP+++IS+
Sbjct: 608  HDGRLAFVDNHLDEIFDSAENPINGNRWWLTAEDPFQCLAACMNLSEALKSTSPHSMISY 667

Query: 1684 LPIHQDGSCNGLQHYAALGRDSLEAAAVNLIAGERPADVYSEIAARVHDIMKRDCSKDPA 1863
            LPIHQDGSCNGLQHYAALGRD+LEAAAVNL+AGE+PADVYSEIA RVH+IMKRD +KDPA
Sbjct: 668  LPIHQDGSCNGLQHYAALGRDNLEAAAVNLVAGEKPADVYSEIAVRVHNIMKRDSNKDPA 727

Query: 1864 THSAARLANLLIDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLMERGNITDDRLLFSAS 2043
            T+  A LA LLIDQVDRKLVKQTVMTSVYGVT+VGAREQIKRRL E+G+ITDDRLLFSA+
Sbjct: 728  TNPNALLAKLLIDQVDRKLVKQTVMTSVYGVTFVGAREQIKRRLEEKGHITDDRLLFSAA 787

Query: 2044 CYAAKVTMTALGEMFQAARSIMGWLGDCAKIIASENEPVRWTTPLGLPVVQPYRKPERHL 2223
            CY AKVT+ ALGE+FQAAR+IMGWLGDCAK+IASEN+PVRWTTPLGLPVVQPY K ERHL
Sbjct: 788  CYTAKVTLAALGELFQAARNIMGWLGDCAKVIASENQPVRWTTPLGLPVVQPYYKSERHL 847

Query: 2224 IRTSLQVLALQREGDSVDVKKQKSAFPPNFVHSLDGSHMMMTAVACRDAGLHFAGVHDSF 2403
            IRT+LQVLALQREG+SV+V+KQ++AFPPNFVHSLDGSHMMMTAVACRDAGL+FAGVHDSF
Sbjct: 848  IRTTLQVLALQREGNSVEVRKQRTAFPPNFVHSLDGSHMMMTAVACRDAGLYFAGVHDSF 907

Query: 2404 WTHACDVDKMNLILREKFVELYDMPILENLLESFQTSFPTLSFPPLPDRGDFDLENV 2574
            WTHACDV+KMN ILREKFVELY MP+LENLLESF+TS+PTL FPPLP+RG+FDL+ V
Sbjct: 908  WTHACDVEKMNQILREKFVELYSMPVLENLLESFETSYPTLVFPPLPERGNFDLQTV 964


>XP_016690333.1 PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like isoform
            X1 [Gossypium hirsutum]
          Length = 972

 Score = 1315 bits (3402), Expect = 0.0
 Identities = 632/837 (75%), Positives = 741/837 (88%), Gaps = 2/837 (0%)
 Frame = +1

Query: 70   KKKKYDSLRRRQIKMETEAWEKMAQEYRDLQREMLEKKLAPNLPYVKSLFLGWFESLRDA 249
            +K+KY+ LRRRQ+K ETEAWEKM +EYR+L+REM EKKLAPNLPYVK LFLGWFE LR+A
Sbjct: 130  EKRKYNLLRRRQVKEETEAWEKMVEEYRELEREMCEKKLAPNLPYVKGLFLGWFEPLREA 189

Query: 250  IAKDQILQESKKQK--AAYANQIGLLPADKMAVIVMHKVMGLLMTGHEDGCVRVVQAAVH 423
            IAK+Q +Q+ K +K  AAYA  I LLPADK+AVIVMHK+MGL+M   EDG V+VVQAAVH
Sbjct: 190  IAKEQKVQKGKNKKLRAAYAPHIELLPADKLAVIVMHKMMGLVMGAEEDGYVQVVQAAVH 249

Query: 424  IGEAVEQEVRIHTFLENSKNYRRGRRNEIDKDEALIKEQAILRKRVNTLIKKQKVIEAQR 603
            IG A+EQEVRIH+FLE +KNY+R  +  +D+ +   KE+ ILRKRVN+LI+++++ E Q+
Sbjct: 250  IGVAIEQEVRIHSFLEKTKNYQR--KQIVDEVQGASKEKEILRKRVNSLIRRRRLTEVQK 307

Query: 604  LVTNEESMSWGRDAQAKLGSRLLELLTETAFVHPPINQLADSPPDIRPAFRHTLKTIRKG 783
            LV NEE   WGRDAQAKLGSRLLELLTETA+V PPI+Q  DSP D+RPAFRH  KTI +G
Sbjct: 308  LVKNEEIKPWGRDAQAKLGSRLLELLTETAYVQPPIDQSGDSPLDVRPAFRHKFKTISRG 367

Query: 784  SGPGCGKRYGVIECDELVHKGLDGTVRHMEMSYMPMLIPPKKWKGYQTGGHLFLPSYVMR 963
             G    KRYGVIECD L+  GLD + +HM + Y+PML+PPKKWKGY  GG+LFLPSYVMR
Sbjct: 368  PGQKIKKRYGVIECDPLIRSGLDKSAKHMMIPYVPMLVPPKKWKGYDKGGYLFLPSYVMR 427

Query: 964  THGARQQQEAVKSVPRKQMQRVFEALDTLGRTKWRVNKRVLEVIEAVWARGGNVAGLVDR 1143
            THG+R+QQEA+K V  K M++VFEALDTLG TKWRVN +VL V+E++WA GGN+AGLVDR
Sbjct: 428  THGSRKQQEALKGVNVKNMRKVFEALDTLGSTKWRVNNKVLAVVESIWASGGNIAGLVDR 487

Query: 1144 EDLLIPEEPHSDDAIEIQKWKWSVSKAKKCNRERHAQRCDIELKLSVARKMKDEEGFYYP 1323
             D+ IPE+P+S+D+ EIQ+WKWSV KA K NRERH+QRCD ELKLSVARKM++EEGFYYP
Sbjct: 488  NDIPIPEKPYSEDSTEIQEWKWSVRKANKVNRERHSQRCDTELKLSVARKMENEEGFYYP 547

Query: 1324 HNLDFRGRAYPMHSHLNHLSSDLCRGVLEFAEGRPLGKAGLRWLKIHLANLYAGGVDKLP 1503
            HNLDFRGRAYPMH HLNHLSSDLCRGVLEFAEGRPLG++GL WLKIHLANLY+GGV+KL 
Sbjct: 548  HNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGRSGLHWLKIHLANLYSGGVEKLS 607

Query: 1504 YEERVMFVDNHLDDILDSAQRTIDGKRWWLSAEDPFQCLAACMNLSDSLRSSSPYTVISH 1683
            ++ R+ FVDNHLD+I DSA+  I+G RWWL+AEDPFQCLAACMNLS++L+S+SP+++IS+
Sbjct: 608  HDGRLAFVDNHLDEIFDSAENPINGNRWWLTAEDPFQCLAACMNLSEALKSTSPHSMISY 667

Query: 1684 LPIHQDGSCNGLQHYAALGRDSLEAAAVNLIAGERPADVYSEIAARVHDIMKRDCSKDPA 1863
            LPIHQDGSCNGLQHYAALGRD+LEAAAVNL+AGE+PADVYSEIA RVH+IMKRD +KDPA
Sbjct: 668  LPIHQDGSCNGLQHYAALGRDNLEAAAVNLVAGEKPADVYSEIAVRVHNIMKRDSNKDPA 727

Query: 1864 THSAARLANLLIDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLMERGNITDDRLLFSAS 2043
            T+  A LA LLIDQVDRKLVKQTVMTSVYGVT+VGAREQIKRRL E+G+ITDDRLLFSA+
Sbjct: 728  TNPNALLAKLLIDQVDRKLVKQTVMTSVYGVTFVGAREQIKRRLEEKGHITDDRLLFSAA 787

Query: 2044 CYAAKVTMTALGEMFQAARSIMGWLGDCAKIIASENEPVRWTTPLGLPVVQPYRKPERHL 2223
            CY AKVT+ ALGE+FQAAR+IMGWLGDCAK+IASEN+PVRWTTPLGLPVVQPY K ERHL
Sbjct: 788  CYTAKVTLAALGELFQAARNIMGWLGDCAKVIASENQPVRWTTPLGLPVVQPYYKSERHL 847

Query: 2224 IRTSLQVLALQREGDSVDVKKQKSAFPPNFVHSLDGSHMMMTAVACRDAGLHFAGVHDSF 2403
            IRT+LQVLALQREG+SV+V+KQ++AFPPNFVHSLDGSHMMMTAVACRDAGL+FAGVHDSF
Sbjct: 848  IRTTLQVLALQREGNSVEVRKQRTAFPPNFVHSLDGSHMMMTAVACRDAGLYFAGVHDSF 907

Query: 2404 WTHACDVDKMNLILREKFVELYDMPILENLLESFQTSFPTLSFPPLPDRGDFDLENV 2574
            WTHACDV+KMN ILREKFVELY MP+LENLLESF+TS+PTL FPPLP+RG+FDL  V
Sbjct: 908  WTHACDVEKMNQILREKFVELYSMPVLENLLESFETSYPTLVFPPLPERGNFDLREV 964


>XP_012445978.1 PREDICTED: DNA-directed RNA polymerase 3, chloroplastic [Gossypium
            raimondii] KJB53873.1 hypothetical protein
            B456_009G009300 [Gossypium raimondii]
          Length = 972

 Score = 1315 bits (3402), Expect = 0.0
 Identities = 632/837 (75%), Positives = 741/837 (88%), Gaps = 2/837 (0%)
 Frame = +1

Query: 70   KKKKYDSLRRRQIKMETEAWEKMAQEYRDLQREMLEKKLAPNLPYVKSLFLGWFESLRDA 249
            +K+KY+ LRRRQ+K ETEAWEKM +EYR+L+REM EKKLAPNLPYVK LFLGWFE LR+A
Sbjct: 130  EKRKYNLLRRRQVKEETEAWEKMVEEYRELEREMCEKKLAPNLPYVKGLFLGWFEPLREA 189

Query: 250  IAKDQILQESKKQK--AAYANQIGLLPADKMAVIVMHKVMGLLMTGHEDGCVRVVQAAVH 423
            IAK+Q +Q+ K +K  AAYA  I LLPADK+AVIVMHK+MGL+M   EDG V+VVQAAVH
Sbjct: 190  IAKEQKVQKGKNKKLRAAYAPHIELLPADKLAVIVMHKMMGLVMGAEEDGYVQVVQAAVH 249

Query: 424  IGEAVEQEVRIHTFLENSKNYRRGRRNEIDKDEALIKEQAILRKRVNTLIKKQKVIEAQR 603
            IG A+EQEVRIH+FLE +KNY+R  +  +D+ +   KE+ ILRKRVN+LI+++++ E Q+
Sbjct: 250  IGVAIEQEVRIHSFLEKTKNYQR--KQIVDEVQGASKEKEILRKRVNSLIRRRRLTEVQK 307

Query: 604  LVTNEESMSWGRDAQAKLGSRLLELLTETAFVHPPINQLADSPPDIRPAFRHTLKTIRKG 783
            LV NEE   WGRDAQAKLGSRLLELLTETA+V PPI+Q  DSP D+RPAFRH  KTI +G
Sbjct: 308  LVKNEEIKPWGRDAQAKLGSRLLELLTETAYVQPPIDQSGDSPLDVRPAFRHKFKTISRG 367

Query: 784  SGPGCGKRYGVIECDELVHKGLDGTVRHMEMSYMPMLIPPKKWKGYQTGGHLFLPSYVMR 963
             G    KRYGVIECD L+  GLD + +HM + Y+PML+PPKKWKGY  GG+LFLPSYVMR
Sbjct: 368  PGQKIKKRYGVIECDPLIRSGLDKSAKHMMIPYVPMLVPPKKWKGYDKGGYLFLPSYVMR 427

Query: 964  THGARQQQEAVKSVPRKQMQRVFEALDTLGRTKWRVNKRVLEVIEAVWARGGNVAGLVDR 1143
            THG+R+QQEA+K V  K M++VFEALDTLG TKWRVN +VL V+E++WA GGN+AGLVDR
Sbjct: 428  THGSRKQQEALKGVNVKNMRKVFEALDTLGSTKWRVNNKVLAVVESIWASGGNIAGLVDR 487

Query: 1144 EDLLIPEEPHSDDAIEIQKWKWSVSKAKKCNRERHAQRCDIELKLSVARKMKDEEGFYYP 1323
             D+ IPE+P+S+D+ EIQ+WKWSV KA K NRERH+QRCD ELKLSVARKM++EEGFYYP
Sbjct: 488  NDIPIPEKPYSEDSTEIQEWKWSVRKANKVNRERHSQRCDTELKLSVARKMENEEGFYYP 547

Query: 1324 HNLDFRGRAYPMHSHLNHLSSDLCRGVLEFAEGRPLGKAGLRWLKIHLANLYAGGVDKLP 1503
            HNLDFRGRAYPMH HLNHLSSDLCRGVLEFAEGRPLG++GL WLKIHLANLY+GGV+KL 
Sbjct: 548  HNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGRSGLHWLKIHLANLYSGGVEKLS 607

Query: 1504 YEERVMFVDNHLDDILDSAQRTIDGKRWWLSAEDPFQCLAACMNLSDSLRSSSPYTVISH 1683
            ++ R+ FVDNHLD+I DSA+  I+G RWWL+AEDPFQCLAACMNLS++L+S+SP+++IS+
Sbjct: 608  HDGRLAFVDNHLDEIFDSAENPINGNRWWLTAEDPFQCLAACMNLSEALKSTSPHSMISY 667

Query: 1684 LPIHQDGSCNGLQHYAALGRDSLEAAAVNLIAGERPADVYSEIAARVHDIMKRDCSKDPA 1863
            LPIHQDGSCNGLQHYAALGRD+LEAAAVNL+AGE+PADVYSEIA RVH+IMKRD +KDPA
Sbjct: 668  LPIHQDGSCNGLQHYAALGRDNLEAAAVNLVAGEKPADVYSEIAVRVHNIMKRDSNKDPA 727

Query: 1864 THSAARLANLLIDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLMERGNITDDRLLFSAS 2043
            T+  A LA LLIDQVDRKLVKQTVMTSVYGVT+VGAREQIKRRL E+G+ITDDRLLFSA+
Sbjct: 728  TNPNALLAKLLIDQVDRKLVKQTVMTSVYGVTFVGAREQIKRRLEEKGHITDDRLLFSAA 787

Query: 2044 CYAAKVTMTALGEMFQAARSIMGWLGDCAKIIASENEPVRWTTPLGLPVVQPYRKPERHL 2223
            CY AKVT+ ALGE+FQAAR+IMGWLGDCAK+IASEN+PVRWTTPLGLPVVQPY K ERHL
Sbjct: 788  CYTAKVTLAALGELFQAARNIMGWLGDCAKVIASENQPVRWTTPLGLPVVQPYYKSERHL 847

Query: 2224 IRTSLQVLALQREGDSVDVKKQKSAFPPNFVHSLDGSHMMMTAVACRDAGLHFAGVHDSF 2403
            IRT+LQVLALQREG+SV+V+KQ++AFPPNFVHSLDGSHMMMTAVACRDAGL+FAGVHDSF
Sbjct: 848  IRTTLQVLALQREGNSVEVRKQRTAFPPNFVHSLDGSHMMMTAVACRDAGLYFAGVHDSF 907

Query: 2404 WTHACDVDKMNLILREKFVELYDMPILENLLESFQTSFPTLSFPPLPDRGDFDLENV 2574
            WTHACDV+KMN ILREKFVELY MP+LENLLESF+TS+PTL FPPLP+RG+FDL  V
Sbjct: 908  WTHACDVEKMNQILREKFVELYSMPVLENLLESFETSYPTLVFPPLPERGNFDLREV 964


>EOY31496.1 DNA/RNA polymerases superfamily protein isoform 1 [Theobroma cacao]
          Length = 978

 Score = 1314 bits (3400), Expect = 0.0
 Identities = 633/837 (75%), Positives = 739/837 (88%), Gaps = 2/837 (0%)
 Frame = +1

Query: 70   KKKKYDSLRRRQIKMETEAWEKMAQEYRDLQREMLEKKLAPNLPYVKSLFLGWFESLRDA 249
            +K+KY+ LRRRQ+K ETEAWEKM +EYR+LQREM EKKLAPNLPYVK LFLGWFE +R+A
Sbjct: 136  EKRKYNLLRRRQVKEETEAWEKMVEEYRELQREMCEKKLAPNLPYVKGLFLGWFEPMREA 195

Query: 250  IAKDQILQE--SKKQKAAYANQIGLLPADKMAVIVMHKVMGLLMTGHEDGCVRVVQAAVH 423
            IA++Q +Q+  SKK +AAYA  I LLPADKMAVIVMHK+MGL+M   E+G V+VVQAAVH
Sbjct: 196  IAREQKVQKGKSKKLRAAYAPHIELLPADKMAVIVMHKMMGLVMGAQENGFVQVVQAAVH 255

Query: 424  IGEAVEQEVRIHTFLENSKNYRRGRRNEIDKDEALIKEQAILRKRVNTLIKKQKVIEAQR 603
            IG A+EQEVRIH FLE +KNY+R  +   D+ + L KE+ IL+KRVN+LI++++++E Q+
Sbjct: 256  IGVAIEQEVRIHNFLEKTKNYQR--KKTTDEVQGLSKEKEILKKRVNSLIRRRRLVEVQK 313

Query: 604  LVTNEESMSWGRDAQAKLGSRLLELLTETAFVHPPINQLADSPPDIRPAFRHTLKTIRKG 783
            LV NEE   WGRDAQAKLGSRLLELLTETA+V PPI+Q  DSPPD++PAFRH  KTI K 
Sbjct: 314  LVKNEEIKPWGRDAQAKLGSRLLELLTETAYVQPPIDQSGDSPPDVQPAFRHKFKTISKD 373

Query: 784  SGPGCGKRYGVIECDELVHKGLDGTVRHMEMSYMPMLIPPKKWKGYQTGGHLFLPSYVMR 963
             G    KRYGVIECD L+  GLD + +HM + Y+PML+PPKKWKGY  GG+LFLPSYVMR
Sbjct: 374  PGKKMMKRYGVIECDPLILSGLDRSAKHMLIPYVPMLVPPKKWKGYDKGGYLFLPSYVMR 433

Query: 964  THGARQQQEAVKSVPRKQMQRVFEALDTLGRTKWRVNKRVLEVIEAVWARGGNVAGLVDR 1143
            THG+R+QQ+A+K V  K+MQ+VFEALDTLG TKWRVNK+VL V+E++WA GGN+AGLVDR
Sbjct: 434  THGSRKQQDALKGVHVKKMQKVFEALDTLGSTKWRVNKKVLAVVESIWASGGNIAGLVDR 493

Query: 1144 EDLLIPEEPHSDDAIEIQKWKWSVSKAKKCNRERHAQRCDIELKLSVARKMKDEEGFYYP 1323
             D+ IPE+P S+D+ E Q+WKWSV KA K NRERH+QRCD ELKLSVARKM++EEGFYYP
Sbjct: 494  NDIPIPEKPSSEDSTESQEWKWSVRKANKINRERHSQRCDTELKLSVARKMENEEGFYYP 553

Query: 1324 HNLDFRGRAYPMHSHLNHLSSDLCRGVLEFAEGRPLGKAGLRWLKIHLANLYAGGVDKLP 1503
            HNLDFRGRAYPMH HLNHLSSDLCRGVLEFAEGRPLG++GL WLKIHLANL+AGGV+KL 
Sbjct: 554  HNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGRSGLHWLKIHLANLFAGGVEKLS 613

Query: 1504 YEERVMFVDNHLDDILDSAQRTIDGKRWWLSAEDPFQCLAACMNLSDSLRSSSPYTVISH 1683
            ++ R+ FVDNHLDDI DSA+  I+G RWWL+AEDPFQCLAAC+NLS+SL+SSSP++V+S+
Sbjct: 614  HDGRLAFVDNHLDDIFDSAENPINGNRWWLTAEDPFQCLAACINLSESLKSSSPHSVLSY 673

Query: 1684 LPIHQDGSCNGLQHYAALGRDSLEAAAVNLIAGERPADVYSEIAARVHDIMKRDCSKDPA 1863
            LPIHQDGSCNGLQHYAALGRDSLEAAAVNL+AGE+PADVYSEIA RVH+IMKRD  KDPA
Sbjct: 674  LPIHQDGSCNGLQHYAALGRDSLEAAAVNLVAGEKPADVYSEIAVRVHNIMKRDSDKDPA 733

Query: 1864 THSAARLANLLIDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLMERGNITDDRLLFSAS 2043
            T+  A LA LLIDQVDRKLVKQTVMTSVYGVT+VGAREQIKRRL E+G+ITDDR+LF+A+
Sbjct: 734  TNPNASLAKLLIDQVDRKLVKQTVMTSVYGVTFVGAREQIKRRLEEKGHITDDRVLFAAA 793

Query: 2044 CYAAKVTMTALGEMFQAARSIMGWLGDCAKIIASENEPVRWTTPLGLPVVQPYRKPERHL 2223
            CY AKVT+ ALGE+FQAAR+IMGWLGDCAK+IASEN+PV+WTTPLGLPVVQPY K ERHL
Sbjct: 794  CYTAKVTLAALGELFQAARNIMGWLGDCAKVIASENQPVQWTTPLGLPVVQPYYKSERHL 853

Query: 2224 IRTSLQVLALQREGDSVDVKKQKSAFPPNFVHSLDGSHMMMTAVACRDAGLHFAGVHDSF 2403
            IRTSLQVLALQREGDSV+V+KQ++AFPPNFVHSLDGSHMMMTAVACRDAGLHFAGVHDSF
Sbjct: 854  IRTSLQVLALQREGDSVEVRKQRTAFPPNFVHSLDGSHMMMTAVACRDAGLHFAGVHDSF 913

Query: 2404 WTHACDVDKMNLILREKFVELYDMPILENLLESFQTSFPTLSFPPLPDRGDFDLENV 2574
            WTHACDV+KMN ILREKFVELY MP+LENL ES QTS+P+L FPPLP+RG+FDL  V
Sbjct: 914  WTHACDVEKMNQILREKFVELYSMPVLENLFESVQTSYPSLVFPPLPERGNFDLREV 970


>XP_017615868.1 PREDICTED: DNA-directed RNA polymerase 3, chloroplastic [Gossypium
            arboreum]
          Length = 861

 Score = 1311 bits (3392), Expect = 0.0
 Identities = 633/842 (75%), Positives = 742/842 (88%), Gaps = 7/842 (0%)
 Frame = +1

Query: 70   KKKKYDSLRRRQIKMETEAWEKMAQEYRDLQREMLEKKLAPNLPYVKSLFLGWFESLRDA 249
            +K+KY+ LRRRQ+K ETEAWEKM +EYR+L+REM EKKLAPNLPYVK LFLGWFE LR+A
Sbjct: 14   EKRKYNLLRRRQVKEETEAWEKMVEEYRELEREMCEKKLAPNLPYVKGLFLGWFEPLREA 73

Query: 250  IAKDQILQE--SKKQKAAYANQIGLLPADKMAVIVMHKVMGLLMTGHEDGCVRVVQAAVH 423
            IAK+Q +Q+  SKK +AAYA  I LLPADK+AVIVMHK+MGL+M   EDG V+VVQAAVH
Sbjct: 74   IAKEQKVQKGKSKKLRAAYAPHIELLPADKLAVIVMHKMMGLVMGAEEDGYVQVVQAAVH 133

Query: 424  IGEAVEQEVRIHTFLENSKNYRRGRRNEIDKDEALIKEQAILRKRVNTLIKKQKVIEAQR 603
            IG A+EQEVRIH+FLE +KNY+R  +  +D+ + + KE+ ILRKRVN+LI+++++ E Q+
Sbjct: 134  IGVAIEQEVRIHSFLEKTKNYQR--KQIVDEVQGVSKEKEILRKRVNSLIRRRRLTEVQK 191

Query: 604  LVTNEESMSWGRDAQAKLGSRLLELLTETAFVHPPINQLADSPPDIRPAFRHTLKTIRKG 783
            LV NEE   WGRDAQAKLGSRLLELLTETA+V PPI+Q  DSPPD+RPAFRH  KTI +G
Sbjct: 192  LVKNEEIKPWGRDAQAKLGSRLLELLTETAYVQPPIDQSGDSPPDVRPAFRHKFKTISRG 251

Query: 784  SGPGCGKRYGVIECDELVHKGLDGTVRHMEMSYMPMLIPPKKWKGYQTGGHLFLPSYVMR 963
             G    KRYGVIECD L+  GLD + +HM + Y+PML+PPKKWKGY  GG+LFLPSYVMR
Sbjct: 252  PGQKIKKRYGVIECDPLIRSGLDKSAKHMMIPYVPMLVPPKKWKGYDKGGYLFLPSYVMR 311

Query: 964  THGARQQQEAVKSVPRKQMQRVFEALDTLGRTKWRVNKRVLEVIEAVWARGGNVAGLVDR 1143
            THG+R+QQEA+K V  K M++VFEALDTLG TKWRVN +VL V+E++WA GGN+AGLVDR
Sbjct: 312  THGSRKQQEALKGVNVKNMRKVFEALDTLGSTKWRVNNKVLAVVESIWASGGNIAGLVDR 371

Query: 1144 EDLLIPEEPHSDDAIEIQKWKWSVSKAKKCNRERHAQRCDIELKLS-----VARKMKDEE 1308
             D+ IPE+P+S+D+ EIQ+WKWSV KA K NRERH+QRCD ELKLS     VARKM++EE
Sbjct: 372  NDIPIPEKPYSEDSTEIQEWKWSVRKANKVNRERHSQRCDTELKLSLVLKQVARKMENEE 431

Query: 1309 GFYYPHNLDFRGRAYPMHSHLNHLSSDLCRGVLEFAEGRPLGKAGLRWLKIHLANLYAGG 1488
            GFYYPHNLDFRGRAYPMH HLNHLSSDLCRGVLEFAEGRPLG++GL WLKIHLANLY+GG
Sbjct: 432  GFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGRSGLHWLKIHLANLYSGG 491

Query: 1489 VDKLPYEERVMFVDNHLDDILDSAQRTIDGKRWWLSAEDPFQCLAACMNLSDSLRSSSPY 1668
            V+KL ++ R+ FVDNHLD+I DSA+  I+G RWWL+AEDPFQCLAACMNLS++L+S+SP+
Sbjct: 492  VEKLSHDGRLAFVDNHLDEIFDSAENPINGNRWWLTAEDPFQCLAACMNLSEALKSTSPH 551

Query: 1669 TVISHLPIHQDGSCNGLQHYAALGRDSLEAAAVNLIAGERPADVYSEIAARVHDIMKRDC 1848
            + IS+LPIHQDGSCNGLQHYAALGRD LEAAAVNL+AGE+PADVYSEIA RVH+IMKRD 
Sbjct: 552  STISYLPIHQDGSCNGLQHYAALGRDDLEAAAVNLVAGEKPADVYSEIAVRVHNIMKRDS 611

Query: 1849 SKDPATHSAARLANLLIDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLMERGNITDDRL 2028
            +KDPAT+  A LA LLIDQVDRKLVKQTVMTSVYGVT+VGAREQIKRRL E+G+ITDDRL
Sbjct: 612  NKDPATNPNALLAKLLIDQVDRKLVKQTVMTSVYGVTFVGAREQIKRRLEEKGHITDDRL 671

Query: 2029 LFSASCYAAKVTMTALGEMFQAARSIMGWLGDCAKIIASENEPVRWTTPLGLPVVQPYRK 2208
            LFSA+CY AKVT+ ALGE+FQAAR+IMGWLGDCAK+IASEN+PVRWTTPLGLPVVQPY K
Sbjct: 672  LFSAACYTAKVTLAALGELFQAARNIMGWLGDCAKVIASENQPVRWTTPLGLPVVQPYYK 731

Query: 2209 PERHLIRTSLQVLALQREGDSVDVKKQKSAFPPNFVHSLDGSHMMMTAVACRDAGLHFAG 2388
             ERHLIRT+LQVLALQREG+SV+V+KQ++AFPPNFVHSLDGSHMMMTAVACRDAGL+FAG
Sbjct: 732  SERHLIRTTLQVLALQREGNSVEVRKQRTAFPPNFVHSLDGSHMMMTAVACRDAGLYFAG 791

Query: 2389 VHDSFWTHACDVDKMNLILREKFVELYDMPILENLLESFQTSFPTLSFPPLPDRGDFDLE 2568
            VHDSFWTHACDV+KMN ILREKFVELY MP+LENLLESF+TS+P+L FPPLP+RG+FDL 
Sbjct: 792  VHDSFWTHACDVEKMNQILREKFVELYSMPVLENLLESFETSYPSLVFPPLPERGNFDLL 851

Query: 2569 NV 2574
             V
Sbjct: 852  EV 853


>XP_006474044.1 PREDICTED: DNA-directed RNA polymerase 3, chloroplastic [Citrus
            sinensis]
          Length = 1009

 Score = 1311 bits (3392), Expect = 0.0
 Identities = 626/838 (74%), Positives = 741/838 (88%)
 Frame = +1

Query: 61   RVAKKKKYDSLRRRQIKMETEAWEKMAQEYRDLQREMLEKKLAPNLPYVKSLFLGWFESL 240
            R  KK+K++ LRRRQ+K ETEAWE+M  EY++L+ +M+EK+LAPNLP++K LFLGWF  L
Sbjct: 165  REMKKRKFNLLRRRQVKQETEAWERMVDEYKELEAKMIEKRLAPNLPHIKGLFLGWFGPL 224

Query: 241  RDAIAKDQILQESKKQKAAYANQIGLLPADKMAVIVMHKVMGLLMTGHEDGCVRVVQAAV 420
            R+AI ++Q +Q +KKQKAAYA  I LLPADK+AVIVMHK+MGL+M GHED CV+VVQAAV
Sbjct: 225  REAIEREQKMQRTKKQKAAYAPHIELLPADKVAVIVMHKMMGLVMAGHEDRCVQVVQAAV 284

Query: 421  HIGEAVEQEVRIHTFLENSKNYRRGRRNEIDKDEALIKEQAILRKRVNTLIKKQKVIEAQ 600
            HIG A+EQE+RIH+FLE +KNY+R ++   D +E L KE+ +LRKRVN+LIK ++V+EAQ
Sbjct: 285  HIGMAIEQEIRIHSFLEKTKNYKR-KKIIADTEEVLSKEKELLRKRVNSLIKSKRVMEAQ 343

Query: 601  RLVTNEESMSWGRDAQAKLGSRLLELLTETAFVHPPINQLADSPPDIRPAFRHTLKTIRK 780
            +L+ NEE+  WGRD QAKLGSRL+ELL ETA+V  P+N    SPPD+RPAFRH  KTI K
Sbjct: 344  KLLKNEETKPWGRDTQAKLGSRLVELLIETAYVQHPVNPADYSPPDVRPAFRHRFKTILK 403

Query: 781  GSGPGCGKRYGVIECDELVHKGLDGTVRHMEMSYMPMLIPPKKWKGYQTGGHLFLPSYVM 960
              G    KRYGV+ECD LV  GLD + +HM + Y+PML+PPKKWKGY  GG+LFLPSYVM
Sbjct: 404  HPGQKTTKRYGVVECDPLVLAGLDRSAKHMLIPYVPMLVPPKKWKGYNKGGYLFLPSYVM 463

Query: 961  RTHGARQQQEAVKSVPRKQMQRVFEALDTLGRTKWRVNKRVLEVIEAVWARGGNVAGLVD 1140
            RTHG+R+QQEA+KSV    M++VFEALDTLG TKWRVNK+VL V+E++W  GGN+AGLVD
Sbjct: 464  RTHGSRKQQEALKSVTGNCMKKVFEALDTLGSTKWRVNKQVLSVLESIWVSGGNIAGLVD 523

Query: 1141 REDLLIPEEPHSDDAIEIQKWKWSVSKAKKCNRERHAQRCDIELKLSVARKMKDEEGFYY 1320
            R D+ IPE+P S+D  E+QKWKWSV KAKK N+ERH+QRCD ELKLSVAR+MKDEEGFYY
Sbjct: 524  RNDVPIPEKPLSEDMTEVQKWKWSVRKAKKINQERHSQRCDTELKLSVARRMKDEEGFYY 583

Query: 1321 PHNLDFRGRAYPMHSHLNHLSSDLCRGVLEFAEGRPLGKAGLRWLKIHLANLYAGGVDKL 1500
            PHNLDFRGRAYPMH HLNHLSSD+CRGVLEFAEGRPLGK+GLRWLKIHLANL++GGV+KL
Sbjct: 584  PHNLDFRGRAYPMHPHLNHLSSDVCRGVLEFAEGRPLGKSGLRWLKIHLANLFSGGVEKL 643

Query: 1501 PYEERVMFVDNHLDDILDSAQRTIDGKRWWLSAEDPFQCLAACMNLSDSLRSSSPYTVIS 1680
             ++ R+ FV+NHL +I DSA+  I+G RWWL+AEDPFQCLAAC+NLS++L+SSSP++VIS
Sbjct: 644  SHDGRLAFVENHLYEIFDSAENPINGSRWWLTAEDPFQCLAACINLSEALKSSSPHSVIS 703

Query: 1681 HLPIHQDGSCNGLQHYAALGRDSLEAAAVNLIAGERPADVYSEIAARVHDIMKRDCSKDP 1860
            HLPIHQDGSCNGLQHYAALGR++LEAAAVNL+AGE+PADVYSEIA RVH+IMKRD +KDP
Sbjct: 704  HLPIHQDGSCNGLQHYAALGRNTLEAAAVNLVAGEKPADVYSEIAVRVHEIMKRDSNKDP 763

Query: 1861 ATHSAARLANLLIDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLMERGNITDDRLLFSA 2040
            + H  A LA +LIDQVDRKLVKQTVMTSVYGVT+VGAREQIKRRL E+G+ITDDR LF+A
Sbjct: 764  SKHPQALLAKILIDQVDRKLVKQTVMTSVYGVTFVGAREQIKRRLEEKGHITDDRQLFAA 823

Query: 2041 SCYAAKVTMTALGEMFQAARSIMGWLGDCAKIIASENEPVRWTTPLGLPVVQPYRKPERH 2220
            +CYAAKVT+TALGE+F+AARSIMGWLGDCAK+IASEN+PVRWTTPLGLPVVQPY K ERH
Sbjct: 824  ACYAAKVTLTALGEIFEAARSIMGWLGDCAKVIASENQPVRWTTPLGLPVVQPYCKNERH 883

Query: 2221 LIRTSLQVLALQREGDSVDVKKQKSAFPPNFVHSLDGSHMMMTAVACRDAGLHFAGVHDS 2400
            LIRTSLQVLALQREG SV+++KQ++AFPPNFVHSLDGSHMMMTAVACRDAGLHFAGVHDS
Sbjct: 884  LIRTSLQVLALQREGKSVEIRKQRTAFPPNFVHSLDGSHMMMTAVACRDAGLHFAGVHDS 943

Query: 2401 FWTHACDVDKMNLILREKFVELYDMPILENLLESFQTSFPTLSFPPLPDRGDFDLENV 2574
            FWTHACDVD+MN ILR+KFVELY+MPILENLLESFQTS+PTLSFPPLP+RG+FDLE V
Sbjct: 944  FWTHACDVDEMNQILRKKFVELYNMPILENLLESFQTSYPTLSFPPLPERGNFDLEEV 1001


>XP_002325119.1 DNA-directed RNA polymerase family protein [Populus trichocarpa]
            EEF03684.1 DNA-directed RNA polymerase family protein
            [Populus trichocarpa]
          Length = 882

 Score = 1310 bits (3390), Expect = 0.0
 Identities = 626/835 (74%), Positives = 729/835 (87%)
 Frame = +1

Query: 70   KKKKYDSLRRRQIKMETEAWEKMAQEYRDLQREMLEKKLAPNLPYVKSLFLGWFESLRDA 249
            +K+KY+ LRRRQI+ ETEAWE+MA EYR L REM E+KLAPNLPYVK L LGWFE L++A
Sbjct: 41   EKRKYNLLRRRQIREETEAWERMADEYRGLVREMCERKLAPNLPYVKGLLLGWFEPLKEA 100

Query: 250  IAKDQILQESKKQKAAYANQIGLLPADKMAVIVMHKVMGLLMTGHEDGCVRVVQAAVHIG 429
            I K+Q +++SKKQK+A++  I LLPADKMAVIVMHK+MGLLM GHEDGCVRVVQAAV IG
Sbjct: 101  IEKEQKMEKSKKQKSAFSPNIELLPADKMAVIVMHKMMGLLMVGHEDGCVRVVQAAVQIG 160

Query: 430  EAVEQEVRIHTFLENSKNYRRGRRNEIDKDEALIKEQAILRKRVNTLIKKQKVIEAQRLV 609
             A+EQEVRIH FLE +KNY+R ++   +  E + KE+ +LRKRVN+LI++++++E Q LV
Sbjct: 161  MAIEQEVRIHNFLEKTKNYQR-KKTMHEVQETMDKEKEVLRKRVNSLIRRKRLMEVQNLV 219

Query: 610  TNEESMSWGRDAQAKLGSRLLELLTETAFVHPPINQLADSPPDIRPAFRHTLKTIRKGSG 789
              +E+  W R  QAKLGSRL+ELLTETA+V PP+NQ  D PPD+RPAFRH  KT+ K  G
Sbjct: 220  KQDETKPWSRGTQAKLGSRLIELLTETAYVQPPVNQSEDIPPDVRPAFRHIFKTLTKNPG 279

Query: 790  PGCGKRYGVIECDELVHKGLDGTVRHMEMSYMPMLIPPKKWKGYQTGGHLFLPSYVMRTH 969
                K+YGVIECD L+  GLDGT +HM + Y PML+PPKKWKGY  GGHLFLPSYVMRTH
Sbjct: 280  QKIVKKYGVIECDPLILTGLDGTAKHMLIPYFPMLVPPKKWKGYDKGGHLFLPSYVMRTH 339

Query: 970  GARQQQEAVKSVPRKQMQRVFEALDTLGRTKWRVNKRVLEVIEAVWARGGNVAGLVDRED 1149
            G+RQQQ AV+SVP KQMQ+VFEALDTLG TKWRVN+R+L+V+E +W  GGN+AGLVDRED
Sbjct: 340  GSRQQQVAVRSVPGKQMQKVFEALDTLGNTKWRVNRRLLDVVERIWTSGGNIAGLVDRED 399

Query: 1150 LLIPEEPHSDDAIEIQKWKWSVSKAKKCNRERHAQRCDIELKLSVARKMKDEEGFYYPHN 1329
            + IPE+P SDD  EIQKWKWSV KAKK N+ERH+QRCD ELKLSVARK+KDEEGFYYPHN
Sbjct: 400  IPIPEKPSSDDLTEIQKWKWSVRKAKKINQERHSQRCDTELKLSVARKLKDEEGFYYPHN 459

Query: 1330 LDFRGRAYPMHSHLNHLSSDLCRGVLEFAEGRPLGKAGLRWLKIHLANLYAGGVDKLPYE 1509
            LDFRGRAYPMH HL HLSSDLCRGVLEF EGRPLGK+GLRWLKIHLANLY+GGV+KL ++
Sbjct: 460  LDFRGRAYPMHPHLTHLSSDLCRGVLEFEEGRPLGKSGLRWLKIHLANLYSGGVEKLSHD 519

Query: 1510 ERVMFVDNHLDDILDSAQRTIDGKRWWLSAEDPFQCLAACMNLSDSLRSSSPYTVISHLP 1689
             R+ FV+NHL +I DSA+  ++GKRWWL AEDPFQCLAAC+NLS++L S+SP+TVISHLP
Sbjct: 520  GRLAFVENHLSEIFDSAKNPVNGKRWWLKAEDPFQCLAACINLSEALNSASPHTVISHLP 579

Query: 1690 IHQDGSCNGLQHYAALGRDSLEAAAVNLIAGERPADVYSEIAARVHDIMKRDCSKDPATH 1869
            IHQDGSCNGLQHYAALGRD+LEAAAVNL+A E+P+DVYSEIA RVH+I++RD +KDPAT+
Sbjct: 580  IHQDGSCNGLQHYAALGRDTLEAAAVNLVAAEKPSDVYSEIAVRVHEIIRRDSNKDPATN 639

Query: 1870 SAARLANLLIDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLMERGNITDDRLLFSASCY 2049
              A LA +L+DQVDRKLVKQTVMTSVYGVTYVGAREQIKRRL E+G+ITDDRLLFSA+CY
Sbjct: 640  PHALLAKILVDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGHITDDRLLFSAACY 699

Query: 2050 AAKVTMTALGEMFQAARSIMGWLGDCAKIIASENEPVRWTTPLGLPVVQPYRKPERHLIR 2229
             AKVT+TALGE+FQAAR IM WLGDCAKIIASE++PV+WTTPLGLPVVQPY K ERHLI+
Sbjct: 700  TAKVTLTALGELFQAARDIMSWLGDCAKIIASEDQPVQWTTPLGLPVVQPYYKTERHLIK 759

Query: 2230 TSLQVLALQREGDSVDVKKQKSAFPPNFVHSLDGSHMMMTAVACRDAGLHFAGVHDSFWT 2409
            TSLQ+LALQREG SV V+KQ++AFPPNFVHSLDGSHMMMTAVACRDAGL FAGVHDSFWT
Sbjct: 760  TSLQILALQREGSSVQVRKQRTAFPPNFVHSLDGSHMMMTAVACRDAGLCFAGVHDSFWT 819

Query: 2410 HACDVDKMNLILREKFVELYDMPILENLLESFQTSFPTLSFPPLPDRGDFDLENV 2574
            HA DVD MN ILREKFVELY+MPILENLLE FQTS+PTL FPPLP+RG+FDL+ V
Sbjct: 820  HATDVDLMNRILREKFVELYNMPILENLLEDFQTSYPTLQFPPLPERGNFDLQKV 874


>KDO62286.1 hypothetical protein CISIN_1g001795mg [Citrus sinensis] KDO62287.1
            hypothetical protein CISIN_1g001795mg [Citrus sinensis]
          Length = 1012

 Score = 1309 bits (3388), Expect = 0.0
 Identities = 624/838 (74%), Positives = 742/838 (88%)
 Frame = +1

Query: 61   RVAKKKKYDSLRRRQIKMETEAWEKMAQEYRDLQREMLEKKLAPNLPYVKSLFLGWFESL 240
            R  KK+K++ LRRRQ+K ETEAWE+M  EY++L+ +M+EK+LAPNLP++K LFLGWF  L
Sbjct: 168  REMKKRKFNLLRRRQVKQETEAWERMVDEYKELEAKMIEKRLAPNLPHIKGLFLGWFGPL 227

Query: 241  RDAIAKDQILQESKKQKAAYANQIGLLPADKMAVIVMHKVMGLLMTGHEDGCVRVVQAAV 420
             +AI ++Q +Q +KKQKAAYA  I LLPADK+AVIVMHK+MGL+M GHED CV+VVQAAV
Sbjct: 228  SEAIEREQKMQRTKKQKAAYAPHIELLPADKVAVIVMHKMMGLVMAGHEDRCVQVVQAAV 287

Query: 421  HIGEAVEQEVRIHTFLENSKNYRRGRRNEIDKDEALIKEQAILRKRVNTLIKKQKVIEAQ 600
            HIG A+EQE+RIH+FLE +KNY+R ++   D +E L KE+ +LRKRVN+LIK ++V+EAQ
Sbjct: 288  HIGMAIEQEIRIHSFLEKTKNYKR-KKIIADTEEVLSKEKELLRKRVNSLIKSKRVMEAQ 346

Query: 601  RLVTNEESMSWGRDAQAKLGSRLLELLTETAFVHPPINQLADSPPDIRPAFRHTLKTIRK 780
            +L+ NEE+  WGRD QAKLGSRL+ELL ETA+V  P+N    SPPD+RPAFRH  KTI K
Sbjct: 347  KLLKNEETKPWGRDTQAKLGSRLVELLIETAYVQHPVNPADYSPPDVRPAFRHRFKTILK 406

Query: 781  GSGPGCGKRYGVIECDELVHKGLDGTVRHMEMSYMPMLIPPKKWKGYQTGGHLFLPSYVM 960
              G    KRYGV+ECD LV +GLD + +HM + Y+PML+PPKKWKGY  GG+LFLPSYVM
Sbjct: 407  HPGQKTTKRYGVVECDPLVLEGLDRSAKHMLIPYVPMLVPPKKWKGYNKGGYLFLPSYVM 466

Query: 961  RTHGARQQQEAVKSVPRKQMQRVFEALDTLGRTKWRVNKRVLEVIEAVWARGGNVAGLVD 1140
            RTHG+R+QQEA+KSV    M++VFEALDTLG TKWRVNK+VL V+E++W  GGN+AGLVD
Sbjct: 467  RTHGSRKQQEALKSVTGNCMKKVFEALDTLGSTKWRVNKQVLSVLESIWVSGGNIAGLVD 526

Query: 1141 REDLLIPEEPHSDDAIEIQKWKWSVSKAKKCNRERHAQRCDIELKLSVARKMKDEEGFYY 1320
            R D+LIPE+P S+D  E+QKWKWSV KAKK N+ERH+QRCD ELKLSVAR+MKDEEGFYY
Sbjct: 527  RNDVLIPEKPLSEDMTEVQKWKWSVRKAKKINQERHSQRCDTELKLSVARRMKDEEGFYY 586

Query: 1321 PHNLDFRGRAYPMHSHLNHLSSDLCRGVLEFAEGRPLGKAGLRWLKIHLANLYAGGVDKL 1500
            PHNLDFRGRAYPMH HLNHLSSD+CRGVLEFAEGRPLGK+GLRWLKIHLANL++GGV+KL
Sbjct: 587  PHNLDFRGRAYPMHPHLNHLSSDVCRGVLEFAEGRPLGKSGLRWLKIHLANLFSGGVEKL 646

Query: 1501 PYEERVMFVDNHLDDILDSAQRTIDGKRWWLSAEDPFQCLAACMNLSDSLRSSSPYTVIS 1680
             ++ R+ FV+NHL +I DSA+  I+G RWWL+AEDPFQCLAAC+NLS++L+SSSP++VIS
Sbjct: 647  SHDGRLAFVENHLYEIFDSAENPINGSRWWLTAEDPFQCLAACINLSEALKSSSPHSVIS 706

Query: 1681 HLPIHQDGSCNGLQHYAALGRDSLEAAAVNLIAGERPADVYSEIAARVHDIMKRDCSKDP 1860
            HLPIHQDGSCNGLQHYAALGR++LEAAAVNL+AGE+PADVYSEIA RVH+IMKRD +KDP
Sbjct: 707  HLPIHQDGSCNGLQHYAALGRNTLEAAAVNLVAGEKPADVYSEIAVRVHEIMKRDSNKDP 766

Query: 1861 ATHSAARLANLLIDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLMERGNITDDRLLFSA 2040
            + H  A LA +LIDQVDRKLVKQTVMTSVYGVT+VGAREQIKRRL E+G+ITDDR LF+A
Sbjct: 767  SKHPQALLAKILIDQVDRKLVKQTVMTSVYGVTFVGAREQIKRRLEEKGHITDDRQLFAA 826

Query: 2041 SCYAAKVTMTALGEMFQAARSIMGWLGDCAKIIASENEPVRWTTPLGLPVVQPYRKPERH 2220
            +CYAAKVT+TALGE+F+AARSIMGWLGDCAK+IASEN+PVRWTTPLGLPVVQPY K ERH
Sbjct: 827  ACYAAKVTLTALGEIFEAARSIMGWLGDCAKVIASENQPVRWTTPLGLPVVQPYCKNERH 886

Query: 2221 LIRTSLQVLALQREGDSVDVKKQKSAFPPNFVHSLDGSHMMMTAVACRDAGLHFAGVHDS 2400
            LIRTSLQVLALQREG+ V+++KQ++AFPPNFVHSLDGSHMMMTAVACRDAGLHFAGVHDS
Sbjct: 887  LIRTSLQVLALQREGNLVEIRKQRTAFPPNFVHSLDGSHMMMTAVACRDAGLHFAGVHDS 946

Query: 2401 FWTHACDVDKMNLILREKFVELYDMPILENLLESFQTSFPTLSFPPLPDRGDFDLENV 2574
            FWTHACDVD+MN ILR+KFVELY+MP+LENLLESFQTS+PTLSFPPLP+RG+FDLE V
Sbjct: 947  FWTHACDVDEMNQILRKKFVELYNMPMLENLLESFQTSYPTLSFPPLPERGNFDLEEV 1004


>EOY31497.1 DNA/RNA polymerases superfamily protein isoform 2 [Theobroma cacao]
          Length = 857

 Score = 1309 bits (3388), Expect = 0.0
 Identities = 633/838 (75%), Positives = 739/838 (88%), Gaps = 3/838 (0%)
 Frame = +1

Query: 70   KKKKYDSLRRRQIKMETEAWEKMAQEYRDLQREMLEKKLAPNLPYVKSLFLGWFESLRDA 249
            +K+KY+ LRRRQ+K ETEAWEKM +EYR+LQREM EKKLAPNLPYVK LFLGWFE +R+A
Sbjct: 14   EKRKYNLLRRRQVKEETEAWEKMVEEYRELQREMCEKKLAPNLPYVKGLFLGWFEPMREA 73

Query: 250  IAKDQILQE--SKKQKAAYANQIGLLPADKMAVIVMHKVMGLLMTGHEDGCVRVVQAAVH 423
            IA++Q +Q+  SKK +AAYA  I LLPADKMAVIVMHK+MGL+M   E+G V+VVQAAVH
Sbjct: 74   IAREQKVQKGKSKKLRAAYAPHIELLPADKMAVIVMHKMMGLVMGAQENGFVQVVQAAVH 133

Query: 424  IGEAVEQEVRIHTFLENSKNYRRGRRNEIDKDEALIKEQAILRKRVNTLIKKQKVIEAQR 603
            IG A+EQEVRIH FLE +KNY+R  +   D+ + L KE+ IL+KRVN+LI++++++E Q+
Sbjct: 134  IGVAIEQEVRIHNFLEKTKNYQR--KKTTDEVQGLSKEKEILKKRVNSLIRRRRLVEVQK 191

Query: 604  LVTNEESMSWGRDAQAKLGSRLLELLTETAFVHPPINQLADSPPDIRPAFRHTLKTIRKG 783
            LV NEE   WGRDAQAKLGSRLLELLTETA+V PPI+Q  DSPPD++PAFRH  KTI K 
Sbjct: 192  LVKNEEIKPWGRDAQAKLGSRLLELLTETAYVQPPIDQSGDSPPDVQPAFRHKFKTISKD 251

Query: 784  SGPGCGKRYGVIECDELVHKGLDGTVRHMEMSYMPMLIPPKKWKGYQTGGHLFLPSYVMR 963
             G    KRYGVIECD L+  GLD + +HM + Y+PML+PPKKWKGY  GG+LFLPSYVMR
Sbjct: 252  PGKKMMKRYGVIECDPLILSGLDRSAKHMLIPYVPMLVPPKKWKGYDKGGYLFLPSYVMR 311

Query: 964  THGARQQQEAVKSVPRKQMQRVFEALDTLGRTKWRVNKRVLEVIEAVWARGGNVAGLVDR 1143
            THG+R+QQ+A+K V  K+MQ+VFEALDTLG TKWRVNK+VL V+E++WA GGN+AGLVDR
Sbjct: 312  THGSRKQQDALKGVHVKKMQKVFEALDTLGSTKWRVNKKVLAVVESIWASGGNIAGLVDR 371

Query: 1144 EDLLIPEEPHSDDAIEIQKWKWSVSKAKKCNRERHAQRCDIELKLSVARKMKDEEGFYYP 1323
             D+ IPE+P S+D+ E Q+WKWSV KA K NRERH+QRCD ELKLSVARKM++EEGFYYP
Sbjct: 372  NDIPIPEKPSSEDSTESQEWKWSVRKANKINRERHSQRCDTELKLSVARKMENEEGFYYP 431

Query: 1324 HNLDFRGRAYPMHSHLNHLSSDLCRGVLEFAEGRPLGKAGLRWLKIHLANLYAGGVDKLP 1503
            HNLDFRGRAYPMH HLNHLSSDLCRGVLEFAEGRPLG++GL WLKIHLANL+AGGV+KL 
Sbjct: 432  HNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGRSGLHWLKIHLANLFAGGVEKLS 491

Query: 1504 YEERVMFVDNHLDDILDSAQRTIDGKRWWLSAEDPFQCLAACMNLSDSLRSSSPYTVISH 1683
            ++ R+ FVDNHLDDI DSA+  I+G RWWL+AEDPFQCLAAC+NLS+SL+SSSP++V+S+
Sbjct: 492  HDGRLAFVDNHLDDIFDSAENPINGNRWWLTAEDPFQCLAACINLSESLKSSSPHSVLSY 551

Query: 1684 LPIHQDGSCNGLQHYAALGRDSLEAAAVNLIAGERPADVYSEIAARVHDIMKRDCSKDPA 1863
            LPIHQDGSCNGLQHYAALGRDSLEAAAVNL+AGE+PADVYSEIA RVH+IMKRD  KDPA
Sbjct: 552  LPIHQDGSCNGLQHYAALGRDSLEAAAVNLVAGEKPADVYSEIAVRVHNIMKRDSDKDPA 611

Query: 1864 THSAARLANLLIDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLMERGNITDDRLLFSAS 2043
            T+  A LA LLIDQVDRKLVKQTVMTSVYGVT+VGAREQIKRRL E+G+ITDDR+LF+A+
Sbjct: 612  TNPNASLAKLLIDQVDRKLVKQTVMTSVYGVTFVGAREQIKRRLEEKGHITDDRVLFAAA 671

Query: 2044 CYAAKVTMTALGEMFQAARSIMGWLGDCAKIIASENEPVRWTTPLGLPVVQPYRKPERHL 2223
            CY AKVT+ ALGE+FQAAR+IMGWLGDCAK+IASEN+PV+WTTPLGLPVVQPY K ERHL
Sbjct: 672  CYTAKVTLAALGELFQAARNIMGWLGDCAKVIASENQPVQWTTPLGLPVVQPYYKSERHL 731

Query: 2224 IRTSLQVLALQREGDS-VDVKKQKSAFPPNFVHSLDGSHMMMTAVACRDAGLHFAGVHDS 2400
            IRTSLQVLALQREGDS V+V+KQ++AFPPNFVHSLDGSHMMMTAVACRDAGLHFAGVHDS
Sbjct: 732  IRTSLQVLALQREGDSVVEVRKQRTAFPPNFVHSLDGSHMMMTAVACRDAGLHFAGVHDS 791

Query: 2401 FWTHACDVDKMNLILREKFVELYDMPILENLLESFQTSFPTLSFPPLPDRGDFDLENV 2574
            FWTHACDV+KMN ILREKFVELY MP+LENL ES QTS+P+L FPPLP+RG+FDL  V
Sbjct: 792  FWTHACDVEKMNQILREKFVELYSMPVLENLFESVQTSYPSLVFPPLPERGNFDLREV 849


>XP_011018068.1 PREDICTED: DNA-directed RNA polymerase 3, chloroplastic [Populus
            euphratica]
          Length = 983

 Score = 1309 bits (3387), Expect = 0.0
 Identities = 626/835 (74%), Positives = 730/835 (87%)
 Frame = +1

Query: 70   KKKKYDSLRRRQIKMETEAWEKMAQEYRDLQREMLEKKLAPNLPYVKSLFLGWFESLRDA 249
            +K+KY+ LRRRQI+ ETEAWE+MA EYR L REM E+KLAPNLPYVK L LGWFE L++A
Sbjct: 142  EKRKYNLLRRRQIREETEAWERMADEYRGLVREMCERKLAPNLPYVKGLLLGWFEPLKEA 201

Query: 250  IAKDQILQESKKQKAAYANQIGLLPADKMAVIVMHKVMGLLMTGHEDGCVRVVQAAVHIG 429
            I K+Q +++SKKQK+A++  I LLPADKMAVIVMHK+MGLLM GHEDGCVRVVQAAV IG
Sbjct: 202  IEKEQKMEKSKKQKSAFSPNIELLPADKMAVIVMHKMMGLLMVGHEDGCVRVVQAAVQIG 261

Query: 430  EAVEQEVRIHTFLENSKNYRRGRRNEIDKDEALIKEQAILRKRVNTLIKKQKVIEAQRLV 609
             A+EQEVRIH FLE +KN++R ++   D  E++ KE+ +LRKRVN+LI++++++E Q LV
Sbjct: 262  MAIEQEVRIHNFLEKTKNHQR-KKTMHDVQESMDKEKEMLRKRVNSLIRRKRLMEVQNLV 320

Query: 610  TNEESMSWGRDAQAKLGSRLLELLTETAFVHPPINQLADSPPDIRPAFRHTLKTIRKGSG 789
              +E+  W R  QAKLGSRL+ELLTETA+V PP+NQ  D PPD+RPAFRH  KT+ K  G
Sbjct: 321  KQDETKPWSRGTQAKLGSRLIELLTETAYVQPPVNQSEDIPPDVRPAFRHIFKTLTKNPG 380

Query: 790  PGCGKRYGVIECDELVHKGLDGTVRHMEMSYMPMLIPPKKWKGYQTGGHLFLPSYVMRTH 969
                K+YGVIECD L+  GLDGT +HM + Y PML+PPKKWKGY  GGHLFLPSY+MRTH
Sbjct: 381  QKIVKKYGVIECDPLILTGLDGTAKHMLIPYFPMLVPPKKWKGYDKGGHLFLPSYIMRTH 440

Query: 970  GARQQQEAVKSVPRKQMQRVFEALDTLGRTKWRVNKRVLEVIEAVWARGGNVAGLVDRED 1149
            G+RQQQ AV+SVP KQMQ+VFEALDTLG TKWRVN+R+L+V+E +W  GGN+AGLVDRED
Sbjct: 441  GSRQQQVAVRSVPGKQMQKVFEALDTLGNTKWRVNRRLLDVVERIWTSGGNIAGLVDRED 500

Query: 1150 LLIPEEPHSDDAIEIQKWKWSVSKAKKCNRERHAQRCDIELKLSVARKMKDEEGFYYPHN 1329
            + IPE+P SDD  EIQKWKWSV KAKK N+ERH+QRCD ELKLSVARK+KDEEGFYYPHN
Sbjct: 501  IPIPEKPSSDDLTEIQKWKWSVRKAKKINQERHSQRCDTELKLSVARKLKDEEGFYYPHN 560

Query: 1330 LDFRGRAYPMHSHLNHLSSDLCRGVLEFAEGRPLGKAGLRWLKIHLANLYAGGVDKLPYE 1509
            LDFRGRAYPMH HL HLSSDLCRGVLEF EGRPLGK+GLRWLKIHLANLY+GGV+KL ++
Sbjct: 561  LDFRGRAYPMHPHLTHLSSDLCRGVLEFEEGRPLGKSGLRWLKIHLANLYSGGVEKLSHD 620

Query: 1510 ERVMFVDNHLDDILDSAQRTIDGKRWWLSAEDPFQCLAACMNLSDSLRSSSPYTVISHLP 1689
             R+ FV+NHL +I DSA+  ++GKRWWL AEDPFQCLAAC+NLS++L S+SP+TVISHLP
Sbjct: 621  GRLAFVENHLSEIFDSAKNPVNGKRWWLKAEDPFQCLAACINLSEALNSASPHTVISHLP 680

Query: 1690 IHQDGSCNGLQHYAALGRDSLEAAAVNLIAGERPADVYSEIAARVHDIMKRDCSKDPATH 1869
            IHQDGSCNGLQHYAALGRDSLEAAAVNL+A E+P+DVYSEIA RVH+I++RD +KDPAT+
Sbjct: 681  IHQDGSCNGLQHYAALGRDSLEAAAVNLVAAEKPSDVYSEIAVRVHEIIRRDSNKDPATN 740

Query: 1870 SAARLANLLIDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLMERGNITDDRLLFSASCY 2049
              A LA +L+DQVDRKLVKQTVMTSVYGVTYVGAREQIKRRL E+G+ITDDRLLFSA+CY
Sbjct: 741  PHALLAKILVDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGHITDDRLLFSAACY 800

Query: 2050 AAKVTMTALGEMFQAARSIMGWLGDCAKIIASENEPVRWTTPLGLPVVQPYRKPERHLIR 2229
             AKVT+TALGE+FQAAR IM WLGDCAKIIASE++PV+WTTPLGLPVVQPY K ERHLI+
Sbjct: 801  TAKVTLTALGELFQAARDIMSWLGDCAKIIASEDQPVQWTTPLGLPVVQPYYKRERHLIK 860

Query: 2230 TSLQVLALQREGDSVDVKKQKSAFPPNFVHSLDGSHMMMTAVACRDAGLHFAGVHDSFWT 2409
            TSLQ+LALQREG SV V+KQ++AFPPNFVHSLDGSHMMMTAVACRDAGL FAGVHDSFWT
Sbjct: 861  TSLQILALQREGSSVQVRKQRTAFPPNFVHSLDGSHMMMTAVACRDAGLCFAGVHDSFWT 920

Query: 2410 HACDVDKMNLILREKFVELYDMPILENLLESFQTSFPTLSFPPLPDRGDFDLENV 2574
            HA DVD MN ILREKFVELY+MPILENLLE FQTS+PTL FPPLP+RG+FDL+ V
Sbjct: 921  HARDVDLMNRILREKFVELYNMPILENLLEDFQTSYPTLKFPPLPERGNFDLQKV 975


>XP_009366215.1 PREDICTED: DNA-directed RNA polymerase 3, chloroplastic [Pyrus x
            bretschneideri]
          Length = 972

 Score = 1309 bits (3387), Expect = 0.0
 Identities = 630/856 (73%), Positives = 738/856 (86%)
 Frame = +1

Query: 7    SNPNLKKQSLSSDGDGDDRVAKKKKYDSLRRRQIKMETEAWEKMAQEYRDLQREMLEKKL 186
            +N  LK +S   D         ++KY+ LRRRQIK ETEAWE+M +EY+DL+R M EKKL
Sbjct: 119  ANQELKLESKEID---------RRKYNLLRRRQIKAETEAWERMVEEYKDLERVMREKKL 169

Query: 187  APNLPYVKSLFLGWFESLRDAIAKDQILQESKKQKAAYANQIGLLPADKMAVIVMHKVMG 366
            AP+LPYVK+LFLGWFE LR+AIA++Q +Q++KK KAA+A  I LLP DKMA+IVMHK+MG
Sbjct: 170  APSLPYVKTLFLGWFEPLREAIAREQQVQQTKKHKAAFAPHIDLLPPDKMALIVMHKMMG 229

Query: 367  LLMTGHEDGCVRVVQAAVHIGEAVEQEVRIHTFLENSKNYRRGRRNEIDKDEALIKEQAI 546
            L+M G++DGCV+VVQAAVHIG A+EQEVRIH+FLE +KN++R +    D+D +LIKE+ I
Sbjct: 230  LVMVGNQDGCVQVVQAAVHIGMAIEQEVRIHSFLEKTKNFQRKKTAVADED-SLIKEKEI 288

Query: 547  LRKRVNTLIKKQKVIEAQRLVTNEESMSWGRDAQAKLGSRLLELLTETAFVHPPINQLAD 726
            LRKRVN LIK++++ E Q+L+  EE   WGRD QAKLGSRL+ELLTETA+V PP+NQLAD
Sbjct: 289  LRKRVNVLIKRKRLREVQKLLVKEEFKPWGRDTQAKLGSRLIELLTETAYVQPPLNQLAD 348

Query: 727  SPPDIRPAFRHTLKTIRKGSGPGCGKRYGVIECDELVHKGLDGTVRHMEMSYMPMLIPPK 906
             PPD+RPAFRH  K   K  G    K YGVIECD LV  GLD T +HM + Y+PML+PP+
Sbjct: 349  GPPDVRPAFRHRFKAAAKTPGQKLVKNYGVIECDPLVLTGLDKTAKHMLIPYVPMLVPPR 408

Query: 907  KWKGYQTGGHLFLPSYVMRTHGARQQQEAVKSVPRKQMQRVFEALDTLGRTKWRVNKRVL 1086
            KWKGY  GGHLFLPSYVMRTHG+R+Q + ++++  KQMQ+VFEALD LG TKWRVNK+VL
Sbjct: 409  KWKGYDKGGHLFLPSYVMRTHGSRKQVDTMRNISGKQMQKVFEALDMLGSTKWRVNKKVL 468

Query: 1087 EVIEAVWARGGNVAGLVDREDLLIPEEPHSDDAIEIQKWKWSVSKAKKCNRERHAQRCDI 1266
             V+E++WARGGN+AGLVDRED+ +P++P  +   EIQ+WKWSV KAKK N+ERH+ RCD 
Sbjct: 469  NVVESIWARGGNIAGLVDREDVPVPDKPPLEGLTEIQEWKWSVRKAKKINQERHSLRCDT 528

Query: 1267 ELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHSHLNHLSSDLCRGVLEFAEGRPLGKAGL 1446
            ELKLSVARKMKDEEGFYYPHNLDFRGRAYPMH HLNHLSSDLCRGVLEFAEGRPLGK+GL
Sbjct: 529  ELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGKSGL 588

Query: 1447 RWLKIHLANLYAGGVDKLPYEERVMFVDNHLDDILDSAQRTIDGKRWWLSAEDPFQCLAA 1626
            RWLKIHLANLYAGGV+KL YEER  FVD+H+DDI DSA   ++G RWWL+AEDP QCLAA
Sbjct: 589  RWLKIHLANLYAGGVEKLSYEERHAFVDHHIDDIFDSATNPVNGNRWWLTAEDPLQCLAA 648

Query: 1627 CMNLSDSLRSSSPYTVISHLPIHQDGSCNGLQHYAALGRDSLEAAAVNLIAGERPADVYS 1806
            C+NLS++L S SP+TVISHLPIHQDGSCNGLQHYAALGRDSLEAAAVNL+AGE+PADVYS
Sbjct: 649  CINLSEALNSPSPHTVISHLPIHQDGSCNGLQHYAALGRDSLEAAAVNLVAGEKPADVYS 708

Query: 1807 EIAARVHDIMKRDCSKDPATHSAARLANLLIDQVDRKLVKQTVMTSVYGVTYVGAREQIK 1986
            EIAARVH+IM+RD +KDP T   A LA +L++Q+DRKLVKQTVMTSVYGVTYVGAREQIK
Sbjct: 709  EIAARVHEIMERDSNKDPTTSPNALLARVLVNQIDRKLVKQTVMTSVYGVTYVGAREQIK 768

Query: 1987 RRLMERGNITDDRLLFSASCYAAKVTMTALGEMFQAARSIMGWLGDCAKIIASENEPVRW 2166
            RRL E+G ITDDRLLF+A+CYAAKVT+ ALGE+FQAAR IMGWLGDCAK+IASEN+PVRW
Sbjct: 769  RRLEEKGFITDDRLLFTAACYAAKVTLAALGEIFQAARGIMGWLGDCAKVIASENQPVRW 828

Query: 2167 TTPLGLPVVQPYRKPERHLIRTSLQVLALQREGDSVDVKKQKSAFPPNFVHSLDGSHMMM 2346
            TTPLGLPVVQPY K ERHLIRTSLQVLALQRE +S+DV+KQ++AFPPNFVHSLDGSHMMM
Sbjct: 829  TTPLGLPVVQPYCKNERHLIRTSLQVLALQRESNSIDVRKQRTAFPPNFVHSLDGSHMMM 888

Query: 2347 TAVACRDAGLHFAGVHDSFWTHACDVDKMNLILREKFVELYDMPILENLLESFQTSFPTL 2526
            TA+ACRDAGL FAGVHDSFWTHACDVD+MN ILREKF+ELY MPILENLLESFQ S+P L
Sbjct: 889  TALACRDAGLRFAGVHDSFWTHACDVDQMNEILREKFIELYSMPILENLLESFQASYPAL 948

Query: 2527 SFPPLPDRGDFDLENV 2574
            +FPPLP+RGDFDL+ V
Sbjct: 949  TFPPLPERGDFDLQEV 964


>XP_016750005.1 PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like
            [Gossypium hirsutum]
          Length = 972

 Score = 1308 bits (3386), Expect = 0.0
 Identities = 628/837 (75%), Positives = 741/837 (88%), Gaps = 2/837 (0%)
 Frame = +1

Query: 70   KKKKYDSLRRRQIKMETEAWEKMAQEYRDLQREMLEKKLAPNLPYVKSLFLGWFESLRDA 249
            +K+KY+ LRRRQ+K ETEAWEKM +EYR+L+REM EKKLAPNLPYVK LFLGWFE LR+A
Sbjct: 130  EKRKYNLLRRRQVKEETEAWEKMVEEYRELEREMCEKKLAPNLPYVKGLFLGWFEPLREA 189

Query: 250  IAKDQILQESKKQK--AAYANQIGLLPADKMAVIVMHKVMGLLMTGHEDGCVRVVQAAVH 423
            IAK+Q +Q+ K +K  AAYA  I LLPADK+AVIVMHK+MGL+M   EDG V+VVQAAVH
Sbjct: 190  IAKEQKVQKGKNKKLRAAYAPHIELLPADKLAVIVMHKMMGLIMGAEEDGYVQVVQAAVH 249

Query: 424  IGEAVEQEVRIHTFLENSKNYRRGRRNEIDKDEALIKEQAILRKRVNTLIKKQKVIEAQR 603
            IG A+EQEVRIH+FLE +KNY+R  +  +D+ + + KE+ ILRKRVN+LI+++++ E Q+
Sbjct: 250  IGVAIEQEVRIHSFLEKTKNYQR--KQIVDEVQGVSKEKEILRKRVNSLIRRRRLTEVQK 307

Query: 604  LVTNEESMSWGRDAQAKLGSRLLELLTETAFVHPPINQLADSPPDIRPAFRHTLKTIRKG 783
            LV NEE   WGRDAQAKLGS LLELLTETA+V PPI+Q  DSPPD+RPAFRH  KTI +G
Sbjct: 308  LVKNEEIKPWGRDAQAKLGSCLLELLTETAYVQPPIDQSGDSPPDVRPAFRHKFKTISRG 367

Query: 784  SGPGCGKRYGVIECDELVHKGLDGTVRHMEMSYMPMLIPPKKWKGYQTGGHLFLPSYVMR 963
             G    KRYGVIECD L+  GLD + +HM + Y+PML+PPKKWKGY  GG+LFLPSYVMR
Sbjct: 368  PGQKIKKRYGVIECDPLIRSGLDKSAKHMMIPYVPMLVPPKKWKGYDKGGYLFLPSYVMR 427

Query: 964  THGARQQQEAVKSVPRKQMQRVFEALDTLGRTKWRVNKRVLEVIEAVWARGGNVAGLVDR 1143
            THG+R+QQEA+K V  K M++VFEALDTLG TKWRVN +VL V+E++WA GGN+AGLVDR
Sbjct: 428  THGSRKQQEALKGVNVKNMRKVFEALDTLGSTKWRVNNKVLAVVESIWASGGNIAGLVDR 487

Query: 1144 EDLLIPEEPHSDDAIEIQKWKWSVSKAKKCNRERHAQRCDIELKLSVARKMKDEEGFYYP 1323
             D+ IPE+P+S+D+ EIQ+WKWS+ KA K NRERH+QRCD ELKLSVARKM++EEGFYYP
Sbjct: 488  NDIPIPEKPYSEDSTEIQEWKWSLRKANKVNRERHSQRCDTELKLSVARKMENEEGFYYP 547

Query: 1324 HNLDFRGRAYPMHSHLNHLSSDLCRGVLEFAEGRPLGKAGLRWLKIHLANLYAGGVDKLP 1503
            HNLDFRGRAYPMH HLNHLSSDLCRGVLEFAEGRPLG++GL WLKIHLANLY+GGV+KL 
Sbjct: 548  HNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGRSGLHWLKIHLANLYSGGVEKLS 607

Query: 1504 YEERVMFVDNHLDDILDSAQRTIDGKRWWLSAEDPFQCLAACMNLSDSLRSSSPYTVISH 1683
            ++ R+ FVD+HLD+I DSA+  I+G RWWL+AEDPFQCLAACMNLS++L+S+SP++ IS+
Sbjct: 608  HDGRLAFVDSHLDEIFDSAENPINGNRWWLAAEDPFQCLAACMNLSEALKSTSPHSTISY 667

Query: 1684 LPIHQDGSCNGLQHYAALGRDSLEAAAVNLIAGERPADVYSEIAARVHDIMKRDCSKDPA 1863
            LPIHQDGSCNGLQHYAALGRD+LEAAAVNL+AGE+PADVYSEIA RVH+IMKRD +KDPA
Sbjct: 668  LPIHQDGSCNGLQHYAALGRDNLEAAAVNLVAGEKPADVYSEIAVRVHNIMKRDSNKDPA 727

Query: 1864 THSAARLANLLIDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLMERGNITDDRLLFSAS 2043
            T+  A LA LLIDQVDRKLVKQTVMTSVYGVT+VGAREQIKRRL E+G+I+DDRLLFSA+
Sbjct: 728  TNPNALLAKLLIDQVDRKLVKQTVMTSVYGVTFVGAREQIKRRLEEKGHISDDRLLFSAA 787

Query: 2044 CYAAKVTMTALGEMFQAARSIMGWLGDCAKIIASENEPVRWTTPLGLPVVQPYRKPERHL 2223
            CY AKVT+ ALGE+FQAAR+IMGWLGDCAK+IASEN+PVRWTTPLGLPVVQPY K ERHL
Sbjct: 788  CYTAKVTLAALGELFQAARNIMGWLGDCAKVIASENQPVRWTTPLGLPVVQPYFKSERHL 847

Query: 2224 IRTSLQVLALQREGDSVDVKKQKSAFPPNFVHSLDGSHMMMTAVACRDAGLHFAGVHDSF 2403
            IRT+LQVLALQREG+SV+V+KQ++AFPPNFVHSLDGSHMMMTAVACRDAGL+FAGVHDSF
Sbjct: 848  IRTTLQVLALQREGNSVEVRKQRTAFPPNFVHSLDGSHMMMTAVACRDAGLYFAGVHDSF 907

Query: 2404 WTHACDVDKMNLILREKFVELYDMPILENLLESFQTSFPTLSFPPLPDRGDFDLENV 2574
            WTHACDV+KMN ILREKFVELY MP+LENLLESF+TS+P+L FPPLP+RG+FDL  V
Sbjct: 908  WTHACDVEKMNQILREKFVELYSMPVLENLLESFETSYPSLVFPPLPERGNFDLLEV 964


>KDO62285.1 hypothetical protein CISIN_1g001795mg [Citrus sinensis]
          Length = 1012

 Score = 1308 bits (3385), Expect = 0.0
 Identities = 623/838 (74%), Positives = 742/838 (88%)
 Frame = +1

Query: 61   RVAKKKKYDSLRRRQIKMETEAWEKMAQEYRDLQREMLEKKLAPNLPYVKSLFLGWFESL 240
            R  KK+K++ LRRRQ+K ETEAWE+M  EY++L+ +M+EK+LAPNLP++K LFLGWF  L
Sbjct: 168  REMKKRKFNLLRRRQVKQETEAWERMVDEYKELEAKMIEKRLAPNLPHIKGLFLGWFGPL 227

Query: 241  RDAIAKDQILQESKKQKAAYANQIGLLPADKMAVIVMHKVMGLLMTGHEDGCVRVVQAAV 420
             +AI ++Q +Q +KKQKAAYA  I LLPADK+AVIVMHK+MGL+M GHED CV+VVQAAV
Sbjct: 228  SEAIEREQKMQRTKKQKAAYAPHIELLPADKVAVIVMHKMMGLVMAGHEDRCVQVVQAAV 287

Query: 421  HIGEAVEQEVRIHTFLENSKNYRRGRRNEIDKDEALIKEQAILRKRVNTLIKKQKVIEAQ 600
            HIG A+EQE+RIH+FLE +KNY+R ++   D +E L KE+ +LRKRVN+LIK ++V+EAQ
Sbjct: 288  HIGMAIEQEIRIHSFLEKTKNYKR-KKIIADTEEVLSKEKELLRKRVNSLIKSKRVMEAQ 346

Query: 601  RLVTNEESMSWGRDAQAKLGSRLLELLTETAFVHPPINQLADSPPDIRPAFRHTLKTIRK 780
            +L+ NEE+  WGRD QAKLGSRL+ELL ETA+V  P+N    SPPD+RPAFRH  KTI K
Sbjct: 347  KLLKNEETKPWGRDTQAKLGSRLVELLIETAYVQHPVNPADYSPPDVRPAFRHRFKTILK 406

Query: 781  GSGPGCGKRYGVIECDELVHKGLDGTVRHMEMSYMPMLIPPKKWKGYQTGGHLFLPSYVM 960
              G    KRYGV+ECD LV +GLD + +HM + Y+PML+PPKKWKGY  GG+LFLPSYVM
Sbjct: 407  HPGQKTTKRYGVVECDPLVLEGLDRSAKHMLIPYVPMLVPPKKWKGYNKGGYLFLPSYVM 466

Query: 961  RTHGARQQQEAVKSVPRKQMQRVFEALDTLGRTKWRVNKRVLEVIEAVWARGGNVAGLVD 1140
            RTHG+R+QQEA+KSV    M++VFEALDTLG TKWRVNK+VL V+E++W  GGN+AGLVD
Sbjct: 467  RTHGSRKQQEALKSVTGNCMKKVFEALDTLGSTKWRVNKQVLSVLESIWVSGGNIAGLVD 526

Query: 1141 REDLLIPEEPHSDDAIEIQKWKWSVSKAKKCNRERHAQRCDIELKLSVARKMKDEEGFYY 1320
            R D+LIPE+P S+D  E+QKWKWSV KAKK N+ERH+QRCD ELKLSVAR+MKDEEGFYY
Sbjct: 527  RNDVLIPEKPLSEDMTEVQKWKWSVRKAKKINQERHSQRCDTELKLSVARRMKDEEGFYY 586

Query: 1321 PHNLDFRGRAYPMHSHLNHLSSDLCRGVLEFAEGRPLGKAGLRWLKIHLANLYAGGVDKL 1500
            PHNLDFRGRAYPMH HLNHLSSD+CRGVLEFAEGRPLGK+GLRWLKIHLANL++GGV+KL
Sbjct: 587  PHNLDFRGRAYPMHPHLNHLSSDVCRGVLEFAEGRPLGKSGLRWLKIHLANLFSGGVEKL 646

Query: 1501 PYEERVMFVDNHLDDILDSAQRTIDGKRWWLSAEDPFQCLAACMNLSDSLRSSSPYTVIS 1680
             ++ R+ FV+NHL +I DSA+  I+G RWWL+AEDPFQCLAAC+NLS++L+SSSP++VIS
Sbjct: 647  SHDGRLAFVENHLYEIFDSAENPINGSRWWLTAEDPFQCLAACINLSEALKSSSPHSVIS 706

Query: 1681 HLPIHQDGSCNGLQHYAALGRDSLEAAAVNLIAGERPADVYSEIAARVHDIMKRDCSKDP 1860
            HLPIHQDGSCNGLQHYAALGR+++EAAAVNL+AGE+PADVYSEIA RVH+IMKRD +KDP
Sbjct: 707  HLPIHQDGSCNGLQHYAALGRNTVEAAAVNLVAGEKPADVYSEIAVRVHEIMKRDSNKDP 766

Query: 1861 ATHSAARLANLLIDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLMERGNITDDRLLFSA 2040
            + H  A LA +LIDQVDRKLVKQTVMTSVYGVT+VGAREQIKRRL E+G+ITDDR LF+A
Sbjct: 767  SKHPQALLAKILIDQVDRKLVKQTVMTSVYGVTFVGAREQIKRRLEEKGHITDDRQLFAA 826

Query: 2041 SCYAAKVTMTALGEMFQAARSIMGWLGDCAKIIASENEPVRWTTPLGLPVVQPYRKPERH 2220
            +CYAAKVT+TALGE+F+AARSIMGWLGDCAK+IASEN+PVRWTTPLGLPVVQPY K ERH
Sbjct: 827  ACYAAKVTLTALGEIFEAARSIMGWLGDCAKVIASENQPVRWTTPLGLPVVQPYCKNERH 886

Query: 2221 LIRTSLQVLALQREGDSVDVKKQKSAFPPNFVHSLDGSHMMMTAVACRDAGLHFAGVHDS 2400
            LIRTSLQVLALQREG+ V+++KQ++AFPPNFVHSLDGSHMMMTAVACRDAGLHFAGVHDS
Sbjct: 887  LIRTSLQVLALQREGNLVEIRKQRTAFPPNFVHSLDGSHMMMTAVACRDAGLHFAGVHDS 946

Query: 2401 FWTHACDVDKMNLILREKFVELYDMPILENLLESFQTSFPTLSFPPLPDRGDFDLENV 2574
            FWTHACDVD+MN ILR+KFVELY+MP+LENLLESFQTS+PTLSFPPLP+RG+FDLE V
Sbjct: 947  FWTHACDVDEMNQILRKKFVELYNMPMLENLLESFQTSYPTLSFPPLPERGNFDLEEV 1004


>APR64221.1 DNA-directed RNA polymerase family protein [Populus tomentosa]
          Length = 983

 Score = 1308 bits (3384), Expect = 0.0
 Identities = 625/835 (74%), Positives = 730/835 (87%)
 Frame = +1

Query: 70   KKKKYDSLRRRQIKMETEAWEKMAQEYRDLQREMLEKKLAPNLPYVKSLFLGWFESLRDA 249
            +++KY+ LRRRQI+ ETEAWE+MA EYR L REM E+KLAPNLPYVK L LGWFE L++A
Sbjct: 142  ERRKYNLLRRRQIREETEAWERMADEYRGLVREMCERKLAPNLPYVKGLLLGWFEPLKEA 201

Query: 250  IAKDQILQESKKQKAAYANQIGLLPADKMAVIVMHKVMGLLMTGHEDGCVRVVQAAVHIG 429
            I K+Q +++SKKQK+A++  I LLPADKMAVIVMHK+MGLLM GHEDGCVRVVQAAV IG
Sbjct: 202  IEKEQKMEKSKKQKSAFSPNIELLPADKMAVIVMHKMMGLLMVGHEDGCVRVVQAAVQIG 261

Query: 430  EAVEQEVRIHTFLENSKNYRRGRRNEIDKDEALIKEQAILRKRVNTLIKKQKVIEAQRLV 609
             A+EQEVRIH FLE +KNY+R ++   +  E + KE+ +LRKRVN+LI++++++E Q LV
Sbjct: 262  MAIEQEVRIHNFLEKTKNYQR-KKTMHEVQETMDKEKEVLRKRVNSLIRRKRLMEVQNLV 320

Query: 610  TNEESMSWGRDAQAKLGSRLLELLTETAFVHPPINQLADSPPDIRPAFRHTLKTIRKGSG 789
              +E+  W R  QAKLGSRL+ELLTETA+V PP+NQ  D PPD+RPAFRH  KT+ K  G
Sbjct: 321  KQDETKPWSRGTQAKLGSRLIELLTETAYVQPPVNQSEDIPPDVRPAFRHRFKTLTKNPG 380

Query: 790  PGCGKRYGVIECDELVHKGLDGTVRHMEMSYMPMLIPPKKWKGYQTGGHLFLPSYVMRTH 969
                K+YGVIECD L+  GLDGT +HM + Y PML+PPKKWKGY  GGHLFLPSY+MRTH
Sbjct: 381  QKIVKKYGVIECDPLILTGLDGTAKHMLIPYFPMLVPPKKWKGYDKGGHLFLPSYIMRTH 440

Query: 970  GARQQQEAVKSVPRKQMQRVFEALDTLGRTKWRVNKRVLEVIEAVWARGGNVAGLVDRED 1149
            G+RQQQ AV+SVP KQMQ+VFEALDTLG TKWRVN+R+L+V+E +W  GGN+AGLVDRED
Sbjct: 441  GSRQQQVAVRSVPGKQMQKVFEALDTLGNTKWRVNRRLLDVVERIWTSGGNIAGLVDRED 500

Query: 1150 LLIPEEPHSDDAIEIQKWKWSVSKAKKCNRERHAQRCDIELKLSVARKMKDEEGFYYPHN 1329
            + IPE+P SDD  EIQKWKWSV KAKK N+ERH+QRCDIELKLSVARK+KDEEGFYYPHN
Sbjct: 501  IPIPEKPSSDDLTEIQKWKWSVRKAKKINQERHSQRCDIELKLSVARKLKDEEGFYYPHN 560

Query: 1330 LDFRGRAYPMHSHLNHLSSDLCRGVLEFAEGRPLGKAGLRWLKIHLANLYAGGVDKLPYE 1509
            LDFRGRAYPMH HL HLSSDLCRGVLEF EGRPLGK+GLRWLKIHLANLY+GGV+KL ++
Sbjct: 561  LDFRGRAYPMHPHLTHLSSDLCRGVLEFEEGRPLGKSGLRWLKIHLANLYSGGVEKLSHD 620

Query: 1510 ERVMFVDNHLDDILDSAQRTIDGKRWWLSAEDPFQCLAACMNLSDSLRSSSPYTVISHLP 1689
             R+ FV+NHL +I DSA+  ++GK WWL AEDPFQCLAAC+NLS++L S+SP+TVISHLP
Sbjct: 621  GRLAFVENHLSEIFDSAKNPVNGKCWWLKAEDPFQCLAACINLSEALSSASPHTVISHLP 680

Query: 1690 IHQDGSCNGLQHYAALGRDSLEAAAVNLIAGERPADVYSEIAARVHDIMKRDCSKDPATH 1869
            IHQDGSCNGLQHYAALGRDSLEAAAVNL+A E+P+DVYSEIA RVH+I++RD +KDPAT+
Sbjct: 681  IHQDGSCNGLQHYAALGRDSLEAAAVNLVAAEKPSDVYSEIAVRVHEIIRRDSNKDPATN 740

Query: 1870 SAARLANLLIDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLMERGNITDDRLLFSASCY 2049
              A LA +L+DQVDRKLVKQTVMTSVYGVTYVGAREQIKRRL E+G+ITDDRLLFSA+CY
Sbjct: 741  PHALLAKILVDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGHITDDRLLFSAACY 800

Query: 2050 AAKVTMTALGEMFQAARSIMGWLGDCAKIIASENEPVRWTTPLGLPVVQPYRKPERHLIR 2229
             AKVT+TALGE+FQAAR+IM WLGDCAKIIASE++PV+WTTPLGLPVVQPY K ERHLI+
Sbjct: 801  TAKVTLTALGELFQAARAIMSWLGDCAKIIASEDQPVQWTTPLGLPVVQPYYKSERHLIK 860

Query: 2230 TSLQVLALQREGDSVDVKKQKSAFPPNFVHSLDGSHMMMTAVACRDAGLHFAGVHDSFWT 2409
            TSLQ+LALQREG SV V+KQ++AFPPNFVHSLDGSHMMMTAVACRDAGL FAGVHDSFWT
Sbjct: 861  TSLQILALQREGSSVQVRKQRTAFPPNFVHSLDGSHMMMTAVACRDAGLCFAGVHDSFWT 920

Query: 2410 HACDVDKMNLILREKFVELYDMPILENLLESFQTSFPTLSFPPLPDRGDFDLENV 2574
            HA DVD MN ILREKFVELY+MPILENLLE FQTS+PTL FPPLP+RG+FDL+ V
Sbjct: 921  HARDVDLMNRILREKFVELYNMPILENLLEDFQTSYPTLKFPPLPERGNFDLQEV 975


>XP_006453566.1 hypothetical protein CICLE_v10007333mg [Citrus clementina] ESR66806.1
            hypothetical protein CICLE_v10007333mg [Citrus
            clementina]
          Length = 1012

 Score = 1303 bits (3372), Expect = 0.0
 Identities = 622/838 (74%), Positives = 740/838 (88%)
 Frame = +1

Query: 61   RVAKKKKYDSLRRRQIKMETEAWEKMAQEYRDLQREMLEKKLAPNLPYVKSLFLGWFESL 240
            R  KK+K++ LRRRQ+K ETEAWE+M  EY++L+ +M+EK+LAPNLP++K LFLGWF  L
Sbjct: 168  REMKKRKFNLLRRRQVKQETEAWERMVDEYKELEAKMIEKRLAPNLPHIKGLFLGWFGPL 227

Query: 241  RDAIAKDQILQESKKQKAAYANQIGLLPADKMAVIVMHKVMGLLMTGHEDGCVRVVQAAV 420
             +AI ++Q +Q +KKQKAAYA  I LLPADKMAVIVMHK+MGL+M GHED CV+VVQAAV
Sbjct: 228  SEAIEREQKMQRTKKQKAAYAPHIELLPADKMAVIVMHKMMGLVMAGHEDRCVQVVQAAV 287

Query: 421  HIGEAVEQEVRIHTFLENSKNYRRGRRNEIDKDEALIKEQAILRKRVNTLIKKQKVIEAQ 600
            HIG A+EQE+RIH+FLE +KNY+R ++   D +E L KE+ +LRKRVN+LIK ++V+EAQ
Sbjct: 288  HIGMAIEQEIRIHSFLEKTKNYKR-KKIIADTEEVLSKEKELLRKRVNSLIKSKRVMEAQ 346

Query: 601  RLVTNEESMSWGRDAQAKLGSRLLELLTETAFVHPPINQLADSPPDIRPAFRHTLKTIRK 780
            +L+ NEE+  WGRD QAKLGSRL+ELL ETA+V  P+N    SPPD+RPAFRH  KTI K
Sbjct: 347  KLLKNEETKPWGRDTQAKLGSRLVELLIETAYVQHPVNPADYSPPDVRPAFRHRFKTILK 406

Query: 781  GSGPGCGKRYGVIECDELVHKGLDGTVRHMEMSYMPMLIPPKKWKGYQTGGHLFLPSYVM 960
              G    KRYGV+ECD LV +GLD + +HM + Y+PML+PPKKWKGY  GG+LFLPSYVM
Sbjct: 407  HPGQKTTKRYGVVECDPLVLEGLDRSAKHMLIPYVPMLVPPKKWKGYNKGGYLFLPSYVM 466

Query: 961  RTHGARQQQEAVKSVPRKQMQRVFEALDTLGRTKWRVNKRVLEVIEAVWARGGNVAGLVD 1140
            RTHG+R+QQEA+KSV    M++VFEALDTLG TKWRVNK+VL V+E++W  GGN+AGLVD
Sbjct: 467  RTHGSRKQQEALKSVTGNCMKKVFEALDTLGSTKWRVNKQVLSVLESIWVSGGNIAGLVD 526

Query: 1141 REDLLIPEEPHSDDAIEIQKWKWSVSKAKKCNRERHAQRCDIELKLSVARKMKDEEGFYY 1320
            R D+LIPE+P S+D  E+QKWKWSV KAKK N+ERH+QRCD ELKLSVAR+MKDEEGFYY
Sbjct: 527  RNDVLIPEKPLSEDMTEVQKWKWSVRKAKKINQERHSQRCDTELKLSVARRMKDEEGFYY 586

Query: 1321 PHNLDFRGRAYPMHSHLNHLSSDLCRGVLEFAEGRPLGKAGLRWLKIHLANLYAGGVDKL 1500
            PHNLDFRGRAYPMH HLNHLSSD+CRGVLEFAEGRPLGK+GLRWLKIHLANL++GGV+KL
Sbjct: 587  PHNLDFRGRAYPMHPHLNHLSSDVCRGVLEFAEGRPLGKSGLRWLKIHLANLFSGGVEKL 646

Query: 1501 PYEERVMFVDNHLDDILDSAQRTIDGKRWWLSAEDPFQCLAACMNLSDSLRSSSPYTVIS 1680
             ++ R+ FV+NHL +I DSA+  I+G RWWL+AEDPFQCLAAC+NL+++L+SSSP++VIS
Sbjct: 647  SHDGRLAFVENHLYEIFDSAENPINGSRWWLTAEDPFQCLAACINLAEALKSSSPHSVIS 706

Query: 1681 HLPIHQDGSCNGLQHYAALGRDSLEAAAVNLIAGERPADVYSEIAARVHDIMKRDCSKDP 1860
            HLPIHQDGSCNGLQHYAALGR++LEAAAVNL+AGE+PADVYSEIA RVH+IMKRD +KD 
Sbjct: 707  HLPIHQDGSCNGLQHYAALGRNTLEAAAVNLVAGEKPADVYSEIAVRVHEIMKRDSNKDH 766

Query: 1861 ATHSAARLANLLIDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLMERGNITDDRLLFSA 2040
            + H  A LA +LIDQVDRKLVKQTVMTSVYGVT+VGAREQIKRRL E+G+ITDDR LF+A
Sbjct: 767  SKHPQALLAKILIDQVDRKLVKQTVMTSVYGVTFVGAREQIKRRLEEKGHITDDRQLFAA 826

Query: 2041 SCYAAKVTMTALGEMFQAARSIMGWLGDCAKIIASENEPVRWTTPLGLPVVQPYRKPERH 2220
            +CYAAKVT+TALGE+F+AARSIMGWLGDCAK+IASEN+PVRWTTPLGLPVVQPY K ERH
Sbjct: 827  ACYAAKVTLTALGEIFEAARSIMGWLGDCAKVIASENQPVRWTTPLGLPVVQPYCKNERH 886

Query: 2221 LIRTSLQVLALQREGDSVDVKKQKSAFPPNFVHSLDGSHMMMTAVACRDAGLHFAGVHDS 2400
            LIRTSLQVLALQREG+ V+++KQ++AFPPNFVHSLDGSHMMMTAVACRDAGLHFAGVHDS
Sbjct: 887  LIRTSLQVLALQREGNLVEIRKQRTAFPPNFVHSLDGSHMMMTAVACRDAGLHFAGVHDS 946

Query: 2401 FWTHACDVDKMNLILREKFVELYDMPILENLLESFQTSFPTLSFPPLPDRGDFDLENV 2574
            FWTHACDVD+MN ILR+KFVELY+MP+LENLLESFQTS+PTLSFP LP+RG+FDLE V
Sbjct: 947  FWTHACDVDEMNQILRKKFVELYNMPMLENLLESFQTSYPTLSFPSLPERGNFDLEEV 1004