BLASTX nr result
ID: Papaver32_contig00032366
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver32_contig00032366
(2172 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AAG50698.1 copia-type polyprotein, putative [Arabidopsis thalian... 559 e-180
AAG60117.1 copia-type polyprotein, putative [Arabidopsis thaliana] 560 e-180
CAB75469.1 copia-type reverse transcriptase-like protein [Arabid... 556 e-180
AAD50001.1 Hypothetical protein [Arabidopsis thaliana] 556 e-179
CAB71063.1 copia-type polyprotein [Arabidopsis thaliana] 553 e-178
KYP66219.1 Retrovirus-related Pol polyprotein from transposon TN... 544 e-177
KYP32069.1 Retrovirus-related Pol polyprotein from transposon TN... 531 e-173
KYP57183.1 Retrovirus-related Pol polyprotein from transposon TN... 514 e-168
KYP55405.1 Retrovirus-related Pol polyprotein from transposon TN... 479 e-157
AAF16534.1 T26F17.17 [Arabidopsis thaliana] 479 e-150
GAU27529.1 hypothetical protein TSUD_29610 [Trifolium subterraneum] 475 e-149
GAU39052.1 hypothetical protein TSUD_396570 [Trifolium subterran... 476 e-149
KYP58997.1 Retrovirus-related Pol polyprotein from transposon TN... 466 e-149
AAT38758.1 Putative gag-pol polyprotein, identical [Solanum demi... 471 e-147
KYP50361.1 Retrovirus-related Pol polyprotein from transposon TN... 464 e-144
KYP44457.1 Retrovirus-related Pol polyprotein from transposon TN... 446 e-144
KYP43697.1 Retrovirus-related Pol polyprotein from transposon TN... 451 e-143
KYP68042.1 Retrovirus-related Pol polyprotein from transposon TN... 453 e-143
KYP35753.1 Retrovirus-related Pol polyprotein from transposon TN... 461 e-143
KYP48915.1 Retrovirus-related Pol polyprotein from transposon TN... 449 e-143
>AAG50698.1 copia-type polyprotein, putative [Arabidopsis thaliana] AAG50765.1
copia-type polyprotein, putative [Arabidopsis thaliana]
Length = 1320
Score = 559 bits (1440), Expect = e-180
Identities = 287/614 (46%), Positives = 396/614 (64%), Gaps = 36/614 (5%)
Frame = +2
Query: 20 EIVENGYEEPAAGVVLTQAQKDTLKDCRXXXXXXXXXXXXTVDDEVMKKIQHATTAKQAW 199
EIVE G+ EP L+Q QKD L+D R +D++ +K+ AT+AK+AW
Sbjct: 36 EIVEKGFIEPENEGSLSQTQKDGLRDSRKRDKKALCLIYQGLDEDTFEKVVEATSAKEAW 95
Query: 200 DKLQTSYKGDDKVKNVRLQTARGEFETLHMNNSEKIYDYFSRVQSIVNQLRDNGEVLDDL 379
+KL+TSYKG D+VK VRLQT RGEFE L M E + DYFSRV ++ N L+ NGE LDD+
Sbjct: 96 EKLRTSYKGADQVKKVRLQTLRGEFEALQMKEGELVSDYFSRVLTVTNNLKRNGEKLDDV 155
Query: 380 RIVQKIMRSLPARFDYVVAAIEEGKDLATMTVDGLMSSLCAHEYRMDLRSAAGSIEQDFQ 559
RI++K++RSL +F+++V IEE KDL MT++ L+ SL A+E + + +EQ
Sbjct: 156 RIMEKVLRSLDLKFEHIVTVIEETKDLEAMTIEQLLGSLQAYEEKK--KKKEDIVEQVLN 213
Query: 560 SKVSMTEKGNS-----SGEVEAKA------------------------------SKPKGR 634
+++ E G S G+V + PK R
Sbjct: 214 MQITKEENGQSYQRRGGGQVRGRGRGGYGNGRGWRPHEDNTNQRGENSSRGRGKGHPKSR 273
Query: 635 YDKSKVRCYHCKKPGNYRKECKLLHVKFNSEHANIVQDGVEERETLLLAC-SSYEEEHLD 811
YDKS V+CY+C K G+Y ECK K E AN V++ ++E + LL+A E+E
Sbjct: 274 YDKSSVKCYNCGKFGHYASECKAPSNKKFEEKANYVEEKIQEEDMLLMASYKKDEQEENH 333
Query: 812 KWYLDTGCSNHMFGKKDKFFQLDESVRGDVNFGNKTKVPIMGKGNILINLKNGSHEYISD 991
KWYLD+G SNHM G+K F +LDESVRG+V G+++K+ + GKGNILI LKNG H++IS+
Sbjct: 334 KWYLDSGASNHMCGRKSMFAELDESVRGNVALGDESKMEVKGKGNILIRLKNGDHQFISN 393
Query: 992 VYYVPSLHWSLLSLGQLCEKGLKIVIEDGVCKIENKKKELVAHVKMTKNCMFPLNLQTSS 1171
VYY+PS+ ++LSLGQL EKG I ++D I +++ L+ V M+KN MF LN++
Sbjct: 394 VYYIPSMKTNILSLGQLLEKGYDIRLKDNNLSIRDQESNLITKVPMSKNRMFVLNIRNDI 453
Query: 1172 VYNFSASITDKNWLWHLRYGHLNFNDLKLLGQKDMVTGLPRLDCTNRFCKGCVL*KQHRD 1351
+++WLWHLR+GHLNF L+LL +K+MV GLP ++ N+ C+GC+L KQ +
Sbjct: 454 AQCLKMCYKEESWLWHLRFGHLNFGGLELLSRKEMVRGLPCINHPNQVCEGCLLGKQFKM 513
Query: 1352 PFPVGKSRRASQQLELIHSDICGPIETESSGGNRYFITFIDDYSRKVWVYFLKKKSEALD 1531
FP S RA + LELIH+D+CGPI+ +S G + YF+ FIDD+SRK WVYFLK+KSE +
Sbjct: 514 SFPKESSSRAQKPLELIHTDVCGPIKPKSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFE 573
Query: 1532 VFNVFKVFVEKQSGYTMKVLRSDRGGEYTSNLFADFCKEQGMQHQLTVSYTPQQNGVSER 1711
+F FK VEK+SG +K +RSDRGGE+TS F +C++ G++ QLTV +PQQNGV+ER
Sbjct: 574 IFKKFKAHVEKESGLVIKTMRSDRGGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVAER 633
Query: 1712 KNRTIVEMARSMLK 1753
KNRTI+EMARSMLK
Sbjct: 634 KNRTILEMARSMLK 647
>AAG60117.1 copia-type polyprotein, putative [Arabidopsis thaliana]
Length = 1352
Score = 560 bits (1442), Expect = e-180
Identities = 288/614 (46%), Positives = 396/614 (64%), Gaps = 36/614 (5%)
Frame = +2
Query: 20 EIVENGYEEPAAGVVLTQAQKDTLKDCRXXXXXXXXXXXXTVDDEVMKKIQHATTAKQAW 199
EIVE G+ EP L+Q QKD L+D R +D++ +K+ AT+AK+AW
Sbjct: 36 EIVEKGFIEPENEGSLSQTQKDGLRDSRKRDKKALCLIYQGLDEDTFEKVVEATSAKEAW 95
Query: 200 DKLQTSYKGDDKVKNVRLQTARGEFETLHMNNSEKIYDYFSRVQSIVNQLRDNGEVLDDL 379
+KL+TSYKG D+VK VRLQT RGEFE L M E + DYFSRV ++ N L+ NGE LDD+
Sbjct: 96 EKLRTSYKGADQVKKVRLQTLRGEFEALQMKEGELVSDYFSRVLTVTNNLKRNGEKLDDV 155
Query: 380 RIVQKIMRSLPARFDYVVAAIEEGKDLATMTVDGLMSSLCAHEYRMDLRSAAGSIEQDFQ 559
RI++K++RSL +F+++V IEE KDL MT++ L+ SL A+E + + IEQ
Sbjct: 156 RIMEKVLRSLDLKFEHIVTVIEETKDLEAMTIEQLLGSLQAYEEKK--KKKEDIIEQVLN 213
Query: 560 SKVSMTEKGNS-----SGEVEAKA------------------------------SKPKGR 634
+++ E G S G+V + PK R
Sbjct: 214 MQITKEENGQSYQRRGGGQVRGRGRGGYGNGRGWRPHEDNTNQRGENSSRGRGKGHPKSR 273
Query: 635 YDKSKVRCYHCKKPGNYRKECKLLHVKFNSEHANIVQDGVEERETLLLAC-SSYEEEHLD 811
YDKS V+CY+C K G+Y ECK K E AN V++ ++E + LL+A E+E
Sbjct: 274 YDKSSVKCYNCGKFGHYASECKAPSNKKFEEKANYVEEKIQEEDMLLMASYKKDEQEENH 333
Query: 812 KWYLDTGCSNHMFGKKDKFFQLDESVRGDVNFGNKTKVPIMGKGNILINLKNGSHEYISD 991
KWYLD+G SNHM G+K F +LDESVRG+V G+++K+ + GKGNILI LKNG H++IS+
Sbjct: 334 KWYLDSGASNHMCGRKSMFAELDESVRGNVALGDESKMEVKGKGNILIRLKNGDHQFISN 393
Query: 992 VYYVPSLHWSLLSLGQLCEKGLKIVIEDGVCKIENKKKELVAHVKMTKNCMFPLNLQTSS 1171
VYY+PS+ ++LSLGQL EKG I ++D I +++ L+ V M+KN MF LN++
Sbjct: 394 VYYIPSMKTNILSLGQLLEKGYDIRLKDNNLSIRDQESNLITKVPMSKNRMFVLNIRNDI 453
Query: 1172 VYNFSASITDKNWLWHLRYGHLNFNDLKLLGQKDMVTGLPRLDCTNRFCKGCVL*KQHRD 1351
+++WLWHLR+GHLNF L+LL +K+MV GLP ++ N+ C+GC+L KQ +
Sbjct: 454 AQCLKMCYKEESWLWHLRFGHLNFGGLELLSRKEMVRGLPCINHPNQVCEGCLLGKQFKM 513
Query: 1352 PFPVGKSRRASQQLELIHSDICGPIETESSGGNRYFITFIDDYSRKVWVYFLKKKSEALD 1531
FP S RA + LELIH+D+CGPI+ +S G + YF+ FIDD+SRK WVYFLK+KSE +
Sbjct: 514 SFPKESSSRAQKSLELIHTDVCGPIKPKSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFE 573
Query: 1532 VFNVFKVFVEKQSGYTMKVLRSDRGGEYTSNLFADFCKEQGMQHQLTVSYTPQQNGVSER 1711
+F FK VEK+SG +K +RSDRGGE+TS F +C++ G++ QLTV +PQQNGV+ER
Sbjct: 574 IFKKFKAHVEKESGLVIKTMRSDRGGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVAER 633
Query: 1712 KNRTIVEMARSMLK 1753
KNRTI+EMARSMLK
Sbjct: 634 KNRTILEMARSMLK 647
>CAB75469.1 copia-type reverse transcriptase-like protein [Arabidopsis thaliana]
Length = 1272
Score = 556 bits (1433), Expect = e-180
Identities = 286/614 (46%), Positives = 394/614 (64%), Gaps = 36/614 (5%)
Frame = +2
Query: 20 EIVENGYEEPAAGVVLTQAQKDTLKDCRXXXXXXXXXXXXTVDDEVMKKIQHATTAKQAW 199
EIVE G+ EP L+Q QKD L+D R +D++ +K+ AT+AK+AW
Sbjct: 36 EIVEKGFIEPENEGSLSQTQKDGLRDSRKRDKKALCLIYQGLDEDTFEKVVEATSAKEAW 95
Query: 200 DKLQTSYKGDDKVKNVRLQTARGEFETLHMNNSEKIYDYFSRVQSIVNQLRDNGEVLDDL 379
+KL+TSYKG D+VK VRLQT RGEFE L M E + DYFSRV ++ N L+ NGE LDD+
Sbjct: 96 EKLRTSYKGADQVKKVRLQTLRGEFEALQMKEGELVSDYFSRVLTVTNNLKRNGEKLDDV 155
Query: 380 RIVQKIMRSLPARFDYVVAAIEEGKDLATMTVDGLMSSLCAHEYRMDLRSAAGSIEQDFQ 559
RI++K++RSL +F+++V IEE KDL MT++ L+ SL A+E + + +EQ
Sbjct: 156 RIMEKVLRSLDLKFEHIVTVIEETKDLEAMTIEQLLGSLQAYEEKK--KKKEDIVEQVLN 213
Query: 560 SKVSMTEKGNS-----SGEVEAKA------------------------------SKPKGR 634
+++ E G S G+V + PK R
Sbjct: 214 MQITKEENGQSYQRRGGGQVRGRGRGGYGNGRGWRPHEDNTNQRGENSSRGRGKGHPKSR 273
Query: 635 YDKSKVRCYHCKKPGNYRKECKLLHVKFNSEHANIVQDGVEERETLLLAC-SSYEEEHLD 811
YDKS V+CY+C K G+Y ECK K E AN V++ ++E + LL+A E+E
Sbjct: 274 YDKSSVKCYNCGKFGHYASECKAPSNKKFKEKANYVEEKIQEEDMLLMASYKKDEQEENH 333
Query: 812 KWYLDTGCSNHMFGKKDKFFQLDESVRGDVNFGNKTKVPIMGKGNILINLKNGSHEYISD 991
KWYLD+G SNHM G+K F +LDESVRG+V G+++K+ + GKGNILI LKNG H++IS+
Sbjct: 334 KWYLDSGASNHMCGRKSMFAELDESVRGNVALGDESKMEVKGKGNILIRLKNGDHQFISN 393
Query: 992 VYYVPSLHWSLLSLGQLCEKGLKIVIEDGVCKIENKKKELVAHVKMTKNCMFPLNLQTSS 1171
VYY+PS+ ++LSLGQL EKG I ++D I +K+ L+ V M+KN MF LN++
Sbjct: 394 VYYIPSMKTNILSLGQLLEKGYDIRLKDNNLSIRDKESNLITKVPMSKNRMFVLNIRNDI 453
Query: 1172 VYNFSASITDKNWLWHLRYGHLNFNDLKLLGQKDMVTGLPRLDCTNRFCKGCVL*KQHRD 1351
+++WLWHLR+GHLNF L+LL +K+MV GLP ++ N+ C+GC+L Q +
Sbjct: 454 AQCLKMCYKEESWLWHLRFGHLNFGGLELLSRKEMVRGLPCINHPNQVCEGCLLGNQFKM 513
Query: 1352 PFPVGKSRRASQQLELIHSDICGPIETESSGGNRYFITFIDDYSRKVWVYFLKKKSEALD 1531
FP S RA + LELIH+D+CGPI+ +S G + YF+ FIDD+SRK WVYFLK+KSE +
Sbjct: 514 SFPKESSSRAQKPLELIHTDVCGPIKPKSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFE 573
Query: 1532 VFNVFKVFVEKQSGYTMKVLRSDRGGEYTSNLFADFCKEQGMQHQLTVSYTPQQNGVSER 1711
+F FK VEK+SG +K +RSD GGE+TS F +C++ G++ QLTV +PQQNGV+ER
Sbjct: 574 IFKKFKAHVEKESGLVIKTMRSDSGGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVAER 633
Query: 1712 KNRTIVEMARSMLK 1753
KNRTI+EMARSMLK
Sbjct: 634 KNRTILEMARSMLK 647
>AAD50001.1 Hypothetical protein [Arabidopsis thaliana]
Length = 1352
Score = 556 bits (1434), Expect = e-179
Identities = 286/614 (46%), Positives = 396/614 (64%), Gaps = 36/614 (5%)
Frame = +2
Query: 20 EIVENGYEEPAAGVVLTQAQKDTLKDCRXXXXXXXXXXXXTVDDEVMKKIQHATTAKQAW 199
EIVE G+ EP L+Q QKD L+D R +D++ +K+ AT+AK+AW
Sbjct: 36 EIVEKGFIEPENEGSLSQTQKDGLRDSRKRDKKALCLIYQGLDEDTFEKVVEATSAKEAW 95
Query: 200 DKLQTSYKGDDKVKNVRLQTARGEFETLHMNNSEKIYDYFSRVQSIVNQLRDNGEVLDDL 379
+KL+TSYKG D+VK VRLQT RGEFE L M E + DYFSRV ++ N L+ NGE LDD+
Sbjct: 96 EKLRTSYKGADQVKKVRLQTLRGEFEALQMKEGELVSDYFSRVLTVTNNLKRNGEKLDDV 155
Query: 380 RIVQKIMRSLPARFDYVVAAIEEGKDLATMTVDGLMSSLCAHEYRMDLRSAAGSIEQDFQ 559
RI++K++RSL +F+++V IEE KDL MT++ L+ SL A+E + + +EQ
Sbjct: 156 RIMEKVLRSLDLKFEHIVTVIEETKDLEAMTIEQLLGSLQAYEEKK--KKKEDIVEQVLN 213
Query: 560 SKVSMTEKGNS-----SGEVEAKA------------------------------SKPKGR 634
+++ E G S G+V + PK R
Sbjct: 214 MQITKEENGQSYQRRGGGQVRGRGRGGYGNGRGWRPHEDNTNQRGENSSRGRGKGHPKSR 273
Query: 635 YDKSKVRCYHCKKPGNYRKECKLLHVKFNSEHANIVQDGVEERETLLLACSSYEEEHLD- 811
YDKS V+CY+C K G+Y ECK K E AN V++ ++E + LL+A +E+ +
Sbjct: 274 YDKSSVKCYNCGKFGHYASECKAPSNKKFEEKANYVEEKIQEEDMLLMASYKKDEQKENH 333
Query: 812 KWYLDTGCSNHMFGKKDKFFQLDESVRGDVNFGNKTKVPIMGKGNILINLKNGSHEYISD 991
KWYLD+G SNHM G+K F +LDESVRG+V G+++K+ + GKGNILI LKNG H++IS+
Sbjct: 334 KWYLDSGASNHMCGRKSMFAELDESVRGNVALGDESKMEVKGKGNILIRLKNGDHQFISN 393
Query: 992 VYYVPSLHWSLLSLGQLCEKGLKIVIEDGVCKIENKKKELVAHVKMTKNCMFPLNLQTSS 1171
VYY+PS+ ++LSLGQL EKG I ++D I +++ L+ V M+KN MF LN++
Sbjct: 394 VYYIPSMKTNILSLGQLLEKGYDIRLKDNNLSIRDQESNLITKVPMSKNRMFVLNIRNDI 453
Query: 1172 VYNFSASITDKNWLWHLRYGHLNFNDLKLLGQKDMVTGLPRLDCTNRFCKGCVL*KQHRD 1351
+++WLWHLR+GHLNF L+LL +K+MV GLP ++ N+ C+GC+L KQ +
Sbjct: 454 AQCLKMCYKEESWLWHLRFGHLNFGGLELLSRKEMVRGLPCINHPNQVCEGCLLGKQFKM 513
Query: 1352 PFPVGKSRRASQQLELIHSDICGPIETESSGGNRYFITFIDDYSRKVWVYFLKKKSEALD 1531
FP S RA + LELIH+D+CGPI+ +S G + YF+ FIDD+SRK WVYFLK+KSE +
Sbjct: 514 SFPKESSSRAQKPLELIHTDVCGPIKPKSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFE 573
Query: 1532 VFNVFKVFVEKQSGYTMKVLRSDRGGEYTSNLFADFCKEQGMQHQLTVSYTPQQNGVSER 1711
+F FK VEK+SG +K +RSDRGGE+TS F +C++ G++ QLTV +PQQNGV ER
Sbjct: 574 IFKKFKAHVEKESGLVIKTMRSDRGGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVVER 633
Query: 1712 KNRTIVEMARSMLK 1753
KNRTI+EMARSMLK
Sbjct: 634 KNRTILEMARSMLK 647
>CAB71063.1 copia-type polyprotein [Arabidopsis thaliana]
Length = 1352
Score = 553 bits (1425), Expect = e-178
Identities = 285/614 (46%), Positives = 395/614 (64%), Gaps = 36/614 (5%)
Frame = +2
Query: 20 EIVENGYEEPAAGVVLTQAQKDTLKDCRXXXXXXXXXXXXTVDDEVMKKIQHATTAKQAW 199
EIVE G+ EP L+Q QKD L+D R +D++ +K+ AT+AK+AW
Sbjct: 36 EIVEKGFIEPENEGSLSQTQKDGLRDSRKRDKKALCLIYQGLDEDTFEKVVEATSAKEAW 95
Query: 200 DKLQTSYKGDDKVKNVRLQTARGEFETLHMNNSEKIYDYFSRVQSIVNQLRDNGEVLDDL 379
+KL+TSYKG D+VK VRLQT RGEFE L M E + DYFSRV ++ N L+ NGE LDD+
Sbjct: 96 EKLRTSYKGADQVKKVRLQTLRGEFEALQMKEGELVSDYFSRVLTVTNNLKRNGEKLDDV 155
Query: 380 RIVQKIMRSLPARFDYVVAAIEEGKDLATMTVDGLMSSLCAHEYRMDLRSAAGSIEQDFQ 559
RI++K++RSL +F+++V IEE KDL MT++ L+ SL A+E + + EQ
Sbjct: 156 RIMEKVLRSLDLKFEHIVTVIEETKDLEAMTIEQLLGSLQAYEEKK--KKKEDIAEQVLN 213
Query: 560 SKVSMTEKGNS-----SGEVEAKA------------------------------SKPKGR 634
+++ E G S G+V + PK R
Sbjct: 214 MQITKEENGQSYQRRGGGQVRGRGRGGYGNGRGWRPHEDNTNQRGENSSRGRGKGHPKSR 273
Query: 635 YDKSKVRCYHCKKPGNYRKECKLLHVKFNSEHANIVQDGVEERETLLLACSSYEEEHLD- 811
YDKS V+CY+C K G+Y ECK K E A+ V++ ++E + LL+A +E+ +
Sbjct: 274 YDKSSVKCYNCGKFGHYASECKAPSNKKFEEKAHYVEEKIQEEDMLLMASYKKDEQKENH 333
Query: 812 KWYLDTGCSNHMFGKKDKFFQLDESVRGDVNFGNKTKVPIMGKGNILINLKNGSHEYISD 991
KWYLD+G SNHM G+K F +LDESVRG+V G+++K+ + GKGNILI LKNG H++IS+
Sbjct: 334 KWYLDSGASNHMCGRKSMFAELDESVRGNVALGDESKMEVKGKGNILIRLKNGDHQFISN 393
Query: 992 VYYVPSLHWSLLSLGQLCEKGLKIVIEDGVCKIENKKKELVAHVKMTKNCMFPLNLQTSS 1171
VYY+PS+ ++LSLGQL EKG I ++D I +++ L+ V M+KN MF LN++
Sbjct: 394 VYYIPSMKTNILSLGQLLEKGYDIRLKDNNLSIRDQESNLITKVPMSKNRMFVLNIRNDI 453
Query: 1172 VYNFSASITDKNWLWHLRYGHLNFNDLKLLGQKDMVTGLPRLDCTNRFCKGCVL*KQHRD 1351
+++WLWHLR+GHLNF L+LL +K+MV GLP ++ N+ C+GC+L KQ +
Sbjct: 454 AQCLKMCYKEESWLWHLRFGHLNFGGLELLSRKEMVRGLPCINHPNQVCEGCLLGKQFKM 513
Query: 1352 PFPVGKSRRASQQLELIHSDICGPIETESSGGNRYFITFIDDYSRKVWVYFLKKKSEALD 1531
FP S RA + LELIH+D+CGPI+ +S G + YF+ FIDD+SRK WVYFLK+KSE +
Sbjct: 514 SFPKESSSRAQKPLELIHTDVCGPIKPKSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFE 573
Query: 1532 VFNVFKVFVEKQSGYTMKVLRSDRGGEYTSNLFADFCKEQGMQHQLTVSYTPQQNGVSER 1711
+F FK VEK+SG +K +RSDRGGE+TS F +C++ G++ QLTV +PQQNGV ER
Sbjct: 574 IFKKFKAHVEKESGLVIKTMRSDRGGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVVER 633
Query: 1712 KNRTIVEMARSMLK 1753
KNRTI+EMARSMLK
Sbjct: 634 KNRTILEMARSMLK 647
>KYP66219.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1033
Score = 544 bits (1401), Expect = e-177
Identities = 275/578 (47%), Positives = 377/578 (65%)
Frame = +2
Query: 20 EIVENGYEEPAAGVVLTQAQKDTLKDCRXXXXXXXXXXXXTVDDEVMKKIQHATTAKQAW 199
E+VE G+ EP L+QAQKD+L+D R +D++ +KI TAK+AW
Sbjct: 25 EVVEKGHTEPENVESLSQAQKDSLRDSRKRDKKALCLIYQGLDEDTFEKISGVKTAKEAW 84
Query: 200 DKLQTSYKGDDKVKNVRLQTARGEFETLHMNNSEKIYDYFSRVQSIVNQLRDNGEVLDDL 379
+KL+ SYKG D+VK VRLQT RGEFE LHM E + DYFSRV ++ N L+ NGE LDD+
Sbjct: 85 EKLKISYKGADQVKKVRLQTLRGEFEALHMKEGELVSDYFSRVLTVTNNLKRNGEKLDDV 144
Query: 380 RIVQKIMRSLPARFDYVVAAIEEGKDLATMTVDGLMSSLCAHEYRMDLRSAAGSIEQDFQ 559
RI++KI+RSL +F+++V EE KDL M+++ L+ +
Sbjct: 145 RIMEKILRSLDPKFEHIVTITEETKDLEAMSIEQLLG----------------------R 182
Query: 560 SKVSMTEKGNSSGEVEAKASKPKGRYDKSKVRCYHCKKPGNYRKECKLLHVKFNSEHANI 739
+ ++G SS + + P RYDKS+++CY+C K G+Y EC+ + E AN
Sbjct: 183 RPNNNNQRGESSNRGRGRGN-PNSRYDKSRIKCYNCNKFGHYASECRAPNKNKVEEKANY 241
Query: 740 VQDGVEERETLLLACSSYEEEHLDKWYLDTGCSNHMFGKKDKFFQLDESVRGDVNFGNKT 919
++ +E TLLLA ++ ++WYLD+G SNHM GK+ F +LDESV+G+V FG+++
Sbjct: 242 AEERCQEDGTLLLAYKGQDKGEDNQWYLDSGASNHMCGKRSMFVELDESVKGNVAFGDES 301
Query: 920 KVPIMGKGNILINLKNGSHEYISDVYYVPSLHWSLLSLGQLCEKGLKIVIEDGVCKIENK 1099
KV + GKGN+LI LKNG H++IS+VYYVPS+ ++LSLGQL EKG I +++ I +
Sbjct: 302 KVAVEGKGNVLIRLKNGEHQFISNVYYVPSMKSNILSLGQLLEKGYDIQLKNNNLSIRDN 361
Query: 1100 KKELVAHVKMTKNCMFPLNLQTSSVYNFSASITDKNWLWHLRYGHLNFNDLKLLGQKDMV 1279
+A V MT+N MF LN+Q+ D++WLWHLR+GHLNF L+LL +K MV
Sbjct: 362 TSRFIAKVPMTRNRMFVLNIQSDGPQCLKMCYKDQSWLWHLRFGHLNFKGLELLSKKAMV 421
Query: 1280 TGLPRLDCTNRFCKGCVL*KQHRDPFPVGKSRRASQQLELIHSDICGPIETESSGGNRYF 1459
GLP + N+ C+GC+L KQ R FP RA + LELIH+D+CGPI+ S G + YF
Sbjct: 422 RGLPCITHPNQVCEGCLLGKQFRLSFPKESDSRAQKPLELIHTDVCGPIKPRSLGKSNYF 481
Query: 1460 ITFIDDYSRKVWVYFLKKKSEALDVFNVFKVFVEKQSGYTMKVLRSDRGGEYTSNLFADF 1639
+ FIDD+SRK WVYFLK+KSE + F FK VEK+SG +K LRSDRGGE+TS F +
Sbjct: 482 LLFIDDFSRKTWVYFLKEKSEVFENFKKFKAHVEKESGLLIKALRSDRGGEFTSKEFQKY 541
Query: 1640 CKEQGMQHQLTVSYTPQQNGVSERKNRTIVEMARSMLK 1753
C++ G++ QLTV +PQQNGV+ERKNRTI+EMARSMLK
Sbjct: 542 CEDNGIRRQLTVPRSPQQNGVAERKNRTILEMARSMLK 579
>KYP32069.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 954
Score = 531 bits (1368), Expect = e-173
Identities = 271/578 (46%), Positives = 370/578 (64%)
Frame = +2
Query: 20 EIVENGYEEPAAGVVLTQAQKDTLKDCRXXXXXXXXXXXXTVDDEVMKKIQHATTAKQAW 199
E+VE G+ EP L+QAQKD+L+D R +D++ +KI TAK+AW
Sbjct: 36 EVVEKGHTEPENVESLSQAQKDSLRDSRKRDKKALCLIYQGLDEDTFEKISGVKTAKEAW 95
Query: 200 DKLQTSYKGDDKVKNVRLQTARGEFETLHMNNSEKIYDYFSRVQSIVNQLRDNGEVLDDL 379
+KL+ SYKG D+VK VRLQT RGEFE LHM E + DYFSRV ++ N L+ NGE LDD+
Sbjct: 96 EKLKISYKGADQVKKVRLQTLRGEFEALHMKEGELVSDYFSRVLTVTNNLKRNGEKLDDV 155
Query: 380 RIVQKIMRSLPARFDYVVAAIEEGKDLATMTVDGLMSSLCAHEYRMDLRSAAGSIEQDFQ 559
RI++KI+RSL +F+++V EE KDL M+++ L+
Sbjct: 156 RIMEKILRSLDPKFEHIVTITEETKDLEAMSIEQLLGE---------------------- 193
Query: 560 SKVSMTEKGNSSGEVEAKASKPKGRYDKSKVRCYHCKKPGNYRKECKLLHVKFNSEHANI 739
+G G P RY KS+++CY+C K G+Y +C+ + E AN
Sbjct: 194 ----SYNRGRGRGN-------PNSRYGKSRIKCYNCNKFGHYASKCRAPNKNKVEEKANY 242
Query: 740 VQDGVEERETLLLACSSYEEEHLDKWYLDTGCSNHMFGKKDKFFQLDESVRGDVNFGNKT 919
++ +E TLLLA ++ ++WYLD+G SNHM GK+ F +LDESV+G+V FG+++
Sbjct: 243 AEERCQEDGTLLLAYKGQDKGEDNQWYLDSGASNHMCGKRSMFVELDESVKGNVAFGDES 302
Query: 920 KVPIMGKGNILINLKNGSHEYISDVYYVPSLHWSLLSLGQLCEKGLKIVIEDGVCKIENK 1099
KV + GKGN+LI LKNG H++IS+VYYVPS+ ++LSLGQL EKG I +++ I +
Sbjct: 303 KVAVEGKGNVLIRLKNGEHQFISNVYYVPSMKSNILSLGQLLEKGYDIQLKNNNLSIRDN 362
Query: 1100 KKELVAHVKMTKNCMFPLNLQTSSVYNFSASITDKNWLWHLRYGHLNFNDLKLLGQKDMV 1279
+A V MT+N MF LN+Q+ D++WLWHLR+GHLNF L+LL +K MV
Sbjct: 363 TSRFIAKVPMTRNRMFVLNIQSDGPQCLKMCYKDQSWLWHLRFGHLNFKGLELLSKKAMV 422
Query: 1280 TGLPRLDCTNRFCKGCVL*KQHRDPFPVGKSRRASQQLELIHSDICGPIETESSGGNRYF 1459
GLP + N+ C+GC+L KQ R FP RA + LELIH+D+CGPI+ S G + YF
Sbjct: 423 RGLPCITHPNQVCEGCLLGKQFRLSFPKESDSRAQKPLELIHTDVCGPIKPRSLGKSNYF 482
Query: 1460 ITFIDDYSRKVWVYFLKKKSEALDVFNVFKVFVEKQSGYTMKVLRSDRGGEYTSNLFADF 1639
+ FIDD+SRK WVYFLK+KSE + F FK VEK++G +K LRSDRGGE+TS F +
Sbjct: 483 LFFIDDFSRKTWVYFLKEKSEVFENFKKFKDNVEKENGLLIKALRSDRGGEFTSKEFQKY 542
Query: 1640 CKEQGMQHQLTVSYTPQQNGVSERKNRTIVEMARSMLK 1753
C++ G++ QLTV +PQQNGV+ERKNRTI+EMARSMLK
Sbjct: 543 CEDNGIRRQLTVPRSPQQNGVAERKNRTILEMARSMLK 580
>KYP57183.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 884
Score = 514 bits (1325), Expect = e-168
Identities = 258/578 (44%), Positives = 370/578 (64%), Gaps = 2/578 (0%)
Frame = +2
Query: 23 IVENGYEEPAAGVVLTQAQKDTLKDCRXXXXXXXXXXXXTVDDEVMKKIQHATTAKQAWD 202
+VE G +PA G ++T+AQ+ TL+D + +D +++ I TAK WD
Sbjct: 15 LVEIGITKPADGTIMTEAQRKTLEDQKLKDLKTKNYLFQAIDRTILETILKKDTAKDIWD 74
Query: 203 KLQTSYKGDDKVKNVRLQTARGEFETLHMNNSEKIYDYFSRVQSIVNQLRDNGEVLDDLR 382
++T Y+G +VK +LQ R EFE LHM E + DYF+R S+ N++R +GE L+D+
Sbjct: 75 SMKTKYQGTARVKRAQLQALRKEFEILHMKEGESVNDYFARTLSVANKMRIHGEKLEDVA 134
Query: 383 IVQKIMRSLPARFDYVVAAIEEGKDLATMTVDGLMSSLCAHEYRMDLRSA-AGSIEQDFQ 559
+V+KI+RS+ +FDYVV +IEE D+ ++++D L SSL HE RM +++
Sbjct: 135 VVEKILRSMTRKFDYVVCSIEESNDIDSLSIDVLQSSLLVHEQRMICYVVDEQALKITTH 194
Query: 560 SKVSMTEKGNSSGEVEAKASKPKGRYDKSKVRCYHCKKPGNYRKECKLLHVKFNSEHANI 739
+ T +G + + ++DK++V CYHC K G+Y+ EC K N+
Sbjct: 195 EGTTSTGRGRGNFRGRGRGRGRHAQFDKTRVECYHCHKLGHYQYECP---DKEKETKVNL 251
Query: 740 VQDGVEERETLLLACSSYEEEHL-DKWYLDTGCSNHMFGKKDKFFQLDESVRGDVNFGNK 916
V+ E E LL+A +E D WYLD+GCSNHM G K F+ +DE+ R V G+
Sbjct: 252 VEF---EGEMLLMAYIDKKENSSGDTWYLDSGCSNHMCGNKSLFYNMDETFRETVKLGDN 308
Query: 917 TKVPIMGKGNILINLKNGSHEYISDVYYVPSLHWSLLSLGQLCEKGLKIVIEDGVCKIEN 1096
+ + +MGKG+I ++KN + IS+V+Y+P L +L+S+GQL E+G I+I+ C+I +
Sbjct: 309 SCISVMGKGDIKFHMKNNTVHTISNVFYIPDLKSNLISMGQLQERGYIIIIQQSRCQIHH 368
Query: 1097 KKKELVAHVKMTKNCMFPLNLQTSSVYNFSASITDKNWLWHLRYGHLNFNDLKLLGQKDM 1276
+K L+ KMT N MFP+++Q FS + D WLWHLRYGHL+F LK L +K+M
Sbjct: 369 PEKGLIVDAKMTANRMFPMHIQYDIQKCFSTRVQDPTWLWHLRYGHLSFKGLKTLHEKNM 428
Query: 1277 VTGLPRLDCTNRFCKGCVL*KQHRDPFPVGKSRRASQQLELIHSDICGPIETESSGGNRY 1456
V GLP+++C C+ C++ KQHRD FP GK+ RA Q L+L+HSDICGPI S+G RY
Sbjct: 429 VEGLPKINCPTEICEDCIVGKQHRDSFPHGKAWRAQQILQLVHSDICGPINPTSNGNKRY 488
Query: 1457 FITFIDDYSRKVWVYFLKKKSEALDVFNVFKVFVEKQSGYTMKVLRSDRGGEYTSNLFAD 1636
FI FIDD+SRK WVYFL++KSEA +F FK VEK+SG +++LR+DRGGE+ S+ FA
Sbjct: 489 FIIFIDDHSRKTWVYFLQEKSEAFLIFKSFKSRVEKESGKYIQILRTDRGGEFNSHNFAS 548
Query: 1637 FCKEQGMQHQLTVSYTPQQNGVSERKNRTIVEMARSML 1750
FC+ G+Q QLT +YTPQQNGV+ERKN+TI+ M RSML
Sbjct: 549 FCELHGIQRQLTAAYTPQQNGVAERKNQTIMNMVRSML 586
>KYP55405.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 666
Score = 479 bits (1233), Expect = e-157
Identities = 269/626 (42%), Positives = 377/626 (60%), Gaps = 15/626 (2%)
Frame = +2
Query: 20 EIVENGYEEPAAGVVLTQAQKDTLKDCRXXXXXXXXXXXXTVDDEVMKKIQHATTAKQAW 199
++V +G P GV LT AQ+ L + +D +++ I T+K
Sbjct: 36 QVVADGVATPGDGVALTDAQQKELDVMKLKDLKAKNYLFQAIDRSILETILCKDTSKDIL 95
Query: 200 DKLQTSYKGDDKVKNVRLQTARGEFETLHMNNSEKIYDYFSRVQSIVNQLRDNGEVLDDL 379
D ++ Y+G +VK +LQ R +FE L M E + DY SR I N +R +GE ++D+
Sbjct: 96 DSMKKKYQGSSRVKRAQLQALRRDFEVLQMKEGESVTDYCSRTMGIANNMRFHGEKMNDI 155
Query: 380 RIVQKIMRSLPARFDYVVAAIEEGKDLATMTVDGLMSSLCAHEYRMDLRSAAGSIEQDFQ 559
IV+KI+RSL +F+YVV +IEE D+ +++D L SSL HE +M+ S ++E+
Sbjct: 156 AIVEKILRSLTPKFEYVVCSIEESNDIDDLSLDELQSSLLVHEQKMNKIS---TMEEQAL 212
Query: 560 SKVSMTEKGNSSGEVEAKASKPKGR--------YDKSKVRCYHCKKPGNYRKEC--KLLH 709
+ T NS G + + +GR +DKSK+ C+ C K G+Y EC +L +
Sbjct: 213 KASTNTPSYNSRGR-DRDRGRGRGRGGNDRRRDHDKSKIECFRCHKFGHYASECYTRLPN 271
Query: 710 VKFNSEHANIVQDGVEERETLLLACSSYEEEHLDKWYLDTGCSNHMFGKKDKFFQLDESV 889
+K E +N +++ +E ETLL+A ++ + WY+DTG SNHM G K F L+E+
Sbjct: 272 LKEKGESSNWIEE--KEVETLLMAVEDAKDSEAEIWYVDTGYSNHMSGSKSSFSYLNENF 329
Query: 890 RGDVNFGNKTKVPIMGKGNILINLKNGSHEYISDVYYVPSLHWSLLSLGQLCEKGLKIVI 1069
V+FG+ + V +MGKG+I I KNG E IS+V+ VP L +LLS GQL EKG +I I
Sbjct: 330 HSIVSFGDCSTVKVMGKGDIKIKTKNGFVETISNVFCVPDLKSNLLSAGQLQEKGYEIFI 389
Query: 1070 EDGVCKIENKKKELVAHVKMTKNCMFPLNLQTSSVYNFSASITDKNWLWHLRYGHLNFND 1249
G +I + + + V M+ N +FPL ++ S A TD WLWH RYGHL+F+
Sbjct: 390 SKGSREIIDPVRGAIVVVNMSSNRLFPLKIE-SIQSGLLAKATDSAWLWHYRYGHLSFSG 448
Query: 1250 LKLLGQKDMVTGLPRLDCTNRFCKGCVL*KQHRDPFPVGKSRRASQQLELIHSDICGPIE 1429
LK+L QKDMVTGLP++ + C+ CV+ KQHR FP GKS RA LEL++SDICGPI
Sbjct: 449 LKILEQKDMVTGLPQITVPSHVCEECVVSKQHRSQFPNGKSWRAKSVLELVYSDICGPIN 508
Query: 1430 TESSGGNRYFITFIDDYSRKVWVYFLKKKSEALDVFNVFKVFVEKQSGYTMKVLRSDRGG 1609
S+GG +Y ITFIDD+SRK WVYFL++KSEAL F FK VE +SG T+K LR+DRGG
Sbjct: 509 PSSNGGKKYLITFIDDFSRKTWVYFLQEKSEALSSFKSFKARVETESGKTIKSLRTDRGG 568
Query: 1610 EYTSNLFADFCKEQGMQHQLTVSYTPQQNGVSERKNRTIVEMARSMLKGYSACSKDYKLY 1789
EY S+ F+ FC++ G++ +LT +YTPQQNGVSERKNRTI+ M RS+L S K +
Sbjct: 569 EYCSDEFSIFCEKHGIRKELTTTYTPQQNGVSERKNRTILNMVRSLLT-KSGVLKYFWPE 627
Query: 1790 NPNTKKVIVSRDVEFV-----EDEAW 1852
N I++R FV +EAW
Sbjct: 628 AVNWSAHILNRSPTFVVKNMTPEEAW 653
>AAF16534.1 T26F17.17 [Arabidopsis thaliana]
Length = 1291
Score = 479 bits (1232), Expect = e-150
Identities = 256/579 (44%), Positives = 361/579 (62%), Gaps = 1/579 (0%)
Frame = +2
Query: 20 EIVENGYEEPAAGVVLTQAQKDTLKDCRXXXXXXXXXXXXTVDDEVMKKIQHATTAKQAW 199
EIVE G+ EP L+Q QKD L+D R +D++ +K+ AT+AK+AW
Sbjct: 36 EIVEKGFIEPENEGSLSQTQKDGLRDSRKRDKKALCLIYQGLDEDTFEKVVEATSAKEAW 95
Query: 200 DKLQTSYKGDDKVKNVRLQTARGEFETLHMNNSEKIYDYFSRVQSIVNQLRDNGEVLDDL 379
+KL+TSYKG D+VK VRLQT RGEFE L M E + DYFSRV ++ N L+ NGE LDD+
Sbjct: 96 EKLRTSYKGVDQVKKVRLQTLRGEFEALQMKEGELVSDYFSRVLTVTNNLKRNGEKLDDV 155
Query: 380 RIVQKIMRSLPARFDYVVAAIEEGKDLATMTVDGLMSSLCAHEYRMDLRSAAGSIEQDFQ 559
RI++K++RSL +F+++V IEE KDL MT++ L+ SL A+E + + +EQ
Sbjct: 156 RIMEKVLRSLDLKFEHIVTVIEETKDLEAMTIEQLLGSLQAYEEKK--KKKEDIVEQVLN 213
Query: 560 SKVSMTEKGNSSGEVEAKASKPKGRYDKSKVRCYHCKKPGNYRKECKLLHVKFNSEHANI 739
+++ E G S + +GR R + +P + K E AN
Sbjct: 214 MRITKEENGQSYQRRGGGEVRGRGRGGYGNGRGW---RPHEDNTNQRAPSNKKFEEKANY 270
Query: 740 VQDGVEERETLLLAC-SSYEEEHLDKWYLDTGCSNHMFGKKDKFFQLDESVRGDVNFGNK 916
V++ ++E + LL+A E+E KWYLD+G SNHM G+K F +LDESVRG+V G++
Sbjct: 271 VEEKIQEEDMLLMASYKKDEQEENHKWYLDSGASNHMCGRKSMFAELDESVRGNVALGDE 330
Query: 917 TKVPIMGKGNILINLKNGSHEYISDVYYVPSLHWSLLSLGQLCEKGLKIVIEDGVCKIEN 1096
+K+ + GKGNILI LKNG H++IS+VYY+PS+ ++LSLGQL EKG I ++D I +
Sbjct: 331 SKMEVKGKGNILIRLKNGDHQFISNVYYIPSMKTNILSLGQLLEKGYDIRLKDNNLSIRD 390
Query: 1097 KKKELVAHVKMTKNCMFPLNLQTSSVYNFSASITDKNWLWHLRYGHLNFNDLKLLGQKDM 1276
++ L+ V M+KN MF LN++ +++WLWHLR+GHLNF L+LL +K+M
Sbjct: 391 QESNLITKVPMSKNRMFVLNIRNDIAQCLKMCYKEESWLWHLRFGHLNFGGLELLSRKEM 450
Query: 1277 VTGLPRLDCTNRFCKGCVL*KQHRDPFPVGKSRRASQQLELIHSDICGPIETESSGGNRY 1456
V GLP ++ N+ C+GC+L KQ + FP S RA + LELIH+D+CGPI+ +S
Sbjct: 451 VRGLPCINHPNQVCEGCLLGKQFKMSFPKESSSRAQKPLELIHTDVCGPIKPKS------ 504
Query: 1457 FITFIDDYSRKVWVYFLKKKSEALDVFNVFKVFVEKQSGYTMKVLRSDRGGEYTSNLFAD 1636
+KSE +F FK VEK+SG +K +RSDRGGE+TS F
Sbjct: 505 -----------------LEKSEVFKIFKKFKAHVEKESGLVIKTMRSDRGGEFTSKEFLK 547
Query: 1637 FCKEQGMQHQLTVSYTPQQNGVSERKNRTIVEMARSMLK 1753
+C++ G++ QLTV +PQQNGV+ERKNRTI+EMARSMLK
Sbjct: 548 YCEDNGIRRQLTVPRSPQQNGVAERKNRTILEMARSMLK 586
>GAU27529.1 hypothetical protein TSUD_29610 [Trifolium subterraneum]
Length = 1263
Score = 475 bits (1223), Expect = e-149
Identities = 250/577 (43%), Positives = 362/577 (62%), Gaps = 41/577 (7%)
Frame = +2
Query: 143 VDDEVMKKIQHATTAKQAWDKLQTSYKGDDKVKNVRLQTARGEFETLHMNNSEKIYDYFS 322
V+ V +KI HA TAK+AW+ L +Y+G D V+ RLQ + +FE + E I+DYFS
Sbjct: 57 VELSVFEKIFHAKTAKEAWEILLKTYEGADPVRRTRLQGLKRQFELMEQGKDESIHDYFS 116
Query: 323 RVQSIVNQLRDNGEVLDDLRIVQKIMRSLPARFDYVVAAIEEGKDLATMTVDGLMSSLCA 502
R+ +VN+++ NG+ +++ +V+KIMR+L RFDYVVAAIEEGK++ TMT++ L +SL +
Sbjct: 117 RMDKLVNEMKSNGDDINEKYVVEKIMRTLSTRFDYVVAAIEEGKNVTTMTLNDLQASLES 176
Query: 503 HEYRMDLRSAAGSIEQ--------------------------------DFQSKVSMTEKG 586
E RM+ RS G+ EQ + Q+ +S +G
Sbjct: 177 REMRMNERS-NGTFEQALKAQTNVRNEGPVQRRSNYFQRGHSSKGTWRNSQTDLSQNTRG 235
Query: 587 NSS----GEVEAKASKPKGRYD---KSKVRCYHCKKPGNYRKEC--KLLHVKFNSEHANI 739
N S ++ + G + +S ++C +CKK G+Y +EC KLL+++ HA +
Sbjct: 236 NGSFQNKSNIQCHKCQKYGHFQSECRSHIQCLNCKKYGHYARECCAKLLNIR--DSHARV 293
Query: 740 VQDGVEERETLLLACSSYEEEHLDKWYLDTGCSNHMFGKKDKFFQLDESVRGDVNFGNKT 919
+ ++ + +L C +++ D+W LDTGCSNH+ G K+ F LDES R V G+ +
Sbjct: 294 AEI-EDDMKMVLTTCHVIADKNDDQWLLDTGCSNHLSGNKELFSNLDESFRSIVKLGDNS 352
Query: 920 KVPIMGKGNILINLKNGSHEYISDVYYVPSLHWSLLSLGQLCEKGLKIVIEDGVCKIENK 1099
K+ ++GKG I I LK+GS YISDV+YVPS+ +LLS+GQL EKG + C I +
Sbjct: 353 KLQVLGKGKIAIRLKDGSLNYISDVFYVPSICQNLLSVGQLAEKGYDLNFNKSGCTINDA 412
Query: 1100 KKELVAHVKMTKNCMFPLNLQTSSVYNFSASITDKNWLWHLRYGHLNFNDLKLLGQKDMV 1279
+ L+A M+ N +FP+N++ + A D NWLWH+R GH NF +K L K V
Sbjct: 413 EMGLIAKTSMSWNRLFPMNIKYDADMCCKAIAIDDNWLWHMRLGHFNFESIKFLANKKWV 472
Query: 1280 TGLPRLDCTNRFCKGCVL*KQHRDPFPVGKSRRASQQLELIHSDICGPIETESSGGNRYF 1459
TGLP + ++ C+ CV+ K+HRDPFP GK+ RA+ LEL+HSD+C +E S+GGN+YF
Sbjct: 473 TGLPVIQVPDKLCEACVVGKKHRDPFPKGKAWRATIPLELVHSDLC-YVEVPSNGGNKYF 531
Query: 1460 ITFIDDYSRKVWVYFLKKKSEALDVFNVFKVFVEKQSGYTMKVLRSDRGGEYTSNLFADF 1639
ITFIDD+SRK WVY LK KS+A D F +VE++SGYT+K LR+DRG EY ++ DF
Sbjct: 532 ITFIDDFSRKTWVYVLKNKSDACDALKRFMAYVERRSGYTLKTLRTDRGTEYI--VYDDF 589
Query: 1640 CKEQGMQHQLTVSYTPQQNGVSERKNRTIVEMARSML 1750
++ G++HQ+T YTPQQNGV+ERKNRTI++ RSML
Sbjct: 590 LRKHGVKHQMTTRYTPQQNGVAERKNRTIMDNVRSML 626
>GAU39052.1 hypothetical protein TSUD_396570 [Trifolium subterraneum]
Length = 1309
Score = 476 bits (1225), Expect = e-149
Identities = 243/608 (39%), Positives = 370/608 (60%), Gaps = 27/608 (4%)
Frame = +2
Query: 14 IPEIVENGYEEPAAGVVLTQAQKDTLKDCRXXXXXXXXXXXXTVDDEVMKKIQHATTAKQ 193
+ ++V+NGY AA T+AQ+ T ++ + VD +KI AT++KQ
Sbjct: 36 VEDLVKNGYNALAADA--TEAQQTTFREVKKKDCKALFLIHQCVDSANFEKISSATSSKQ 93
Query: 194 AWDKLQTSYKGDDKVKNVRLQTARGEFETLHMNNSEKIYDYFSRVQSIVNQLRDNGEVLD 373
AWD L ++ G DKVK VRLQ+ R ++E L M + E I D+F+R+Q++VN +++ G+ +
Sbjct: 94 AWDTLNNAHGGGDKVKKVRLQSLRRQYELLGMMDKESIGDFFTRLQTLVNTMKNLGDQIS 153
Query: 374 DLRIVQKIMRSLPARFDYVVAAIEEGKDLATMTVDGLMSSLCAHEYRMDLRSAAGSIEQD 553
D ++++K++R+L ++FD++V AIEE KDL+TM+++ L SSL AHE R+ R + + ++
Sbjct: 154 DQQVIEKVLRTLNSQFDHIVVAIEESKDLSTMSLNELQSSLEAHEQRLKERKESKNQQEQ 213
Query: 554 ---------------------FQSKVSMT-----EKGNSSGEVEAKASKPKGRYDKSKVR 655
++ K + + G+ S + +K +G+ DK K++
Sbjct: 214 ALYARNGSKNGKGKGKWKNEKYKGKSESSYDQDHDNGDQSQSESSMKNKNQGKKDKRKIK 273
Query: 656 CYHCKKPGNYRKECKLLHVKFNSEHANIVQDGVEERETLLLACSSYEEEHLDKWYLDTGC 835
C+ C K G+Y EC+ K E + Q+ + LL+ ++ E+ WYLDTGC
Sbjct: 274 CFSCNKWGHYASECQNKGKKKQEEANHAGQNDTDSDGVLLMVTTNTSEDQSTLWYLDTGC 333
Query: 836 SNHMFGKKDKFFQLDESVRGDVNFGNKTKVPIMGKGNILINLKNGSHEYISDVYYVPSLH 1015
+NHM G +D +LDE+ + V F + + + + GKG +++ KNG+H +++DV YVP++
Sbjct: 334 TNHMTGHRDWLLELDETFKSTVKFADNSTISVEGKGKVMVTRKNGNHTFVTDVLYVPTMK 393
Query: 1016 WSLLSLGQLCEKGLKIVIEDGVCKIENKKKELVAHVKMTKNCMFPLNLQTSSVYNFSASI 1195
+LLSLGQL EKG + +D ++ + K+LV ++KN F +NLQ S V FS+ I
Sbjct: 394 HNLLSLGQLIEKGFALSTKDKFLEVHDPYKKLVLKAPLSKNRTFKVNLQASEVQCFSSLI 453
Query: 1196 T-DKNWLWHLRYGHLNFNDLKLLGQKDMVTGLPRLDCTNRFCKGCVL*KQHRDPFPVGKS 1372
T DK LWH RYGHLNF L L K MV GLP + ++ C+GC KQ R+ F
Sbjct: 454 TEDKKRLWHYRYGHLNFKSLNQLSSKHMVVGLPLIHTPDKLCEGCFASKQPRNSFKNTVY 513
Query: 1373 RRASQQLELIHSDICGPIETESSGGNRYFITFIDDYSRKVWVYFLKKKSEALDVFNVFKV 1552
R +Q L ++HSDICGPIET + GGNRYF+T +D+++RKVW+Y LK+KSEA F F
Sbjct: 514 YRLTQPLHVVHSDICGPIETATLGGNRYFMTCVDEFTRKVWIYLLKEKSEAFSAFKKFCA 573
Query: 1553 FVEKQSGYTMKVLRSDRGGEYTSNLFADFCKEQGMQHQLTVSYTPQQNGVSERKNRTIVE 1732
E+Q +K LR+D GGEY SN F FC+E+G+ H++T YTPQ NG++ER+NRT++
Sbjct: 574 TAERQCENHLKTLRTDGGGEYNSNEFKTFCEEKGITHEVTAPYTPQHNGLAERRNRTLLN 633
Query: 1733 MARSMLKG 1756
MAR MLKG
Sbjct: 634 MARCMLKG 641
>KYP58997.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 946
Score = 466 bits (1200), Expect = e-149
Identities = 246/559 (44%), Positives = 354/559 (63%), Gaps = 22/559 (3%)
Frame = +2
Query: 143 VDDEVMKKIQHATTAKQAWDKLQTSYKGDDKVKNVRLQTARGEFETLHMNNSEKIYDYFS 322
VD + KI +A TAK+AW+ L+ SYKG +K + +LQ+ R E+E M+NSE + YFS
Sbjct: 67 VDYSIFGKIANAKTAKEAWNILKLSYKGVEKAQKSKLQSLRREYERYEMSNSESVEQYFS 126
Query: 323 RVQSIVNQLRDNGEVLDDLRIVQKIMRSLPARFDYVVAAIEEGKDLATMTVDGLMSSLCA 502
RV +VN++R GE + + ++V+KI+R++P +FD+VV AI E D MTV L S+ +
Sbjct: 127 RVTDLVNKMRVYGEDIPESKVVEKILRTMPMKFDHVVTAIIESHDTDIMTVAKLQGSIES 186
Query: 503 HEYRMDLRSAAGSIEQDFQSKVSMTE----------KGNSSGEVEAKASKPKGR-----Y 637
H R+ ++ G+ E+ +S+V+ T KG G + + + +GR
Sbjct: 187 HVSRILEKTEKGN-EEALKSQVNFTNIAEPSRREDSKGREGGNINFRG-RGRGRGSFTNQ 244
Query: 638 DKSKVRCYHCKKPGNYRKECKLLHVKFNSEHANIVQ-------DGVEERETLLLACSSYE 796
+++ CYHC K G+ +C+ + ANI + + + +TLLL +++
Sbjct: 245 ERTNFNCYHCGKFGHRAADCRF------KQQANIAENQYKHTGESSDNPQTLLLVANNFS 298
Query: 797 EEHLDKWYLDTGCSNHMFGKKDKFFQLDESVRGDVNFGNKTKVPIMGKGNILINLKNGSH 976
+ WYLDTGCSNH+ GKK+ FF LDE+V+ V FGN + +PI+GKG + I LK+GS
Sbjct: 299 GDGAI-WYLDTGCSNHLCGKKELFFSLDETVKSTVKFGNNSNIPILGKGRVAIRLKDGSQ 357
Query: 977 EYISDVYYVPSLHWSLLSLGQLCEKGLKIVIEDGVCKIENKKKELVAHVKMTKNCMFPLN 1156
+ISDV+Y LH +LLS+GQL +KG + I G C + +K +A VKMT N +FPL
Sbjct: 358 NFISDVFYARGLHHNLLSMGQLSKKGYNMKIHHGYCTLIDKSGRFIAKVKMTPNRLFPLK 417
Query: 1157 LQTSSVYNFSASITDKNWLWHLRYGHLNFNDLKLLGQKDMVTGLPRLDCTNRFCKGCVL* 1336
+ S+ I + +WLWH+R+GH +F+ L L +K+ V+GLP ++ N C+ C +
Sbjct: 418 ICHEKFTCLSSIIPNDDWLWHMRFGHFHFSGLNYLSRKEYVSGLPIVNIPNGVCETCEIG 477
Query: 1337 KQHRDPFPVGKSRRASQQLELIHSDICGPIETESSGGNRYFITFIDDYSRKVWVYFLKKK 1516
K+HR+ FP G S RA + LE++HSD+C +E + GG+RYFITFIDD+SRK WVYFLK+K
Sbjct: 478 KKHRESFPTGVSWRAKKLLEIVHSDLC-MVEIPTHGGSRYFITFIDDFSRKAWVYFLKQK 536
Query: 1517 SEALDVFNVFKVFVEKQSGYTMKVLRSDRGGEYTSNLFADFCKEQGMQHQLTVSYTPQQN 1696
SEA D F FK FVEKQSG +K LR+DRG EY + A+F G+QHQ+T YTPQQN
Sbjct: 537 SEACDAFKSFKAFVEKQSGCKIKALRTDRGQEYLA--CANFFDHHGIQHQMTTRYTPQQN 594
Query: 1697 GVSERKNRTIVEMARSMLK 1753
GV+ERKNRTI++M R MLK
Sbjct: 595 GVAERKNRTIMDMVRCMLK 613
Score = 81.3 bits (199), Expect = 4e-12
Identities = 49/119 (41%), Positives = 64/119 (53%)
Frame = +2
Query: 1754 GYSACSKDYKLYNPNTKKVIVSRDVEFVEDEAWEWSVEDKKHMSFVLEEDLVTEEPELVT 1933
GYS SK YKLYNP TKKVI+SRDV F E+ W+WS + +K V+ + EE V
Sbjct: 690 GYSTNSKAYKLYNPVTKKVIISRDVTFDEEGMWDWSFKAQKEP--VINPENYEEENGHVN 747
Query: 1934 EXXXXXXXXXXXXXXXXXXRSSTRTHVMPTRLEDYILTNYSDVSDEGLINFALYANSDP 2110
R +P RLEDY++ N +D SDE +INFAL+A+ +P
Sbjct: 748 PTPDEPETSSRPQ----------RQRRLPARLEDYVVGNDNDPSDEEIINFALFADCEP 796
>AAT38758.1 Putative gag-pol polyprotein, identical [Solanum demissum]
Length = 1333
Score = 471 bits (1213), Expect = e-147
Identities = 272/599 (45%), Positives = 366/599 (61%), Gaps = 21/599 (3%)
Frame = +2
Query: 20 EIVENGYEEPAAGVVLTQAQKDTLKDCRXXXXXXXXXXXXTVDDEVMKKIQHATTAKQAW 199
+IVE G E A + ++D+ +DDE+ +I T+KQAW
Sbjct: 40 DIVETGIPEGNANQMREHRKRDS---------KALFTIQQALDDEIFPRISAVETSKQAW 90
Query: 200 DKLQTSYKGDDKVKNVRLQTARGEFETLHMNNSEKIYDYFSRVQSIVNQLRDNGEVLDDL 379
+ L+ Y GDDKV V+LQT R +FETL MN +E + Y SR +IVN++R GE +D+
Sbjct: 91 EILKQEYFGDDKVITVKLQTLRRDFETLFMNENESVQGYLSRTSAIVNRMRSYGEKIDNQ 150
Query: 380 RIVQKIMRSLPARFDYVVAAIEEGKDLATMTVDGLMSSLCAHEYRMDLRSAAGSIEQDFQ 559
+V K++RSL +F++VV AIEE KDL+T + D LMSSL AHE R++ RS E+ FQ
Sbjct: 151 IVVSKVLRSLTTKFEHVVTAIEESKDLSTYSFDELMSSLLAHEDRLN-RSREKVQEKAFQ 209
Query: 560 SKVSMTEKG---NSSGEVEAKAS--------KPKGRYD-------KSKVRCYHCKKPGNY 685
K + KG NS+G + + +GR KS ++C +CKK G+
Sbjct: 210 VKGEFSYKGKAENSAGRGHGRGNFRGRGRGGSGRGRNQVGEFRQYKSNIQCRYCKKFGHK 269
Query: 686 RKECKLLHVKFNSEHANIVQDGVEERETLLLACSSYEEEHLDKWYLDTGCSNHMFGKKDK 865
+C K + AN Q+ VEE L +A S E W++D+GCSNHM K
Sbjct: 270 EVDCWTKQ-KDEQKDANFTQN-VEEESKLFMASSQITESANAVWFIDSGCSNHMSSSKSL 327
Query: 866 FFQLDESVRGDVNFGNKTKVPIMGKGNILINLKNGSHEYISDVYYVPSLHWSLLSLGQLC 1045
F LDES + +V G+ +V I GKG + I G+ +++ DV YVP+L +LLS+GQL
Sbjct: 328 FRDLDESQKSEVRLGDDKQVHIEGKGTVEIKTVQGNVKFLYDVQYVPTLAHNLLSVGQLM 387
Query: 1046 EKGLKIVIEDGVCKIENKKK-ELVAHVKMTKNCMFPLNLQTSSVYNFSASITDKNW--LW 1216
G +V D C I++K+ +A V MT+N MFPL++ S+V N + + +KN LW
Sbjct: 388 TSGYSVVFYDNACDIKDKESGRTIARVPMTQNKMFPLDI--SNVGNSALVVKEKNETNLW 445
Query: 1217 HLRYGHLNFNDLKLLGQKDMVTGLPRLDCTNRFCKGCVL*KQHRDPFPVGKSRRASQQLE 1396
HLRYGHLN N LKLL QKDMV GLP + + C+GC+ KQ R FPVGKS RA+ LE
Sbjct: 446 HLRYGHLNVNWLKLLVQKDMVIGLPNIKELD-LCEGCIYGKQTRKSFPVGKSWRATTCLE 504
Query: 1397 LIHSDICGPIETESSGGNRYFITFIDDYSRKVWVYFLKKKSEALDVFNVFKVFVEKQSGY 1576
L+H+D+CGP++ ES GG+RYF+ F DDYSR WVYFLK KSE + F FK FVE QSG
Sbjct: 505 LVHADLCGPMKMESLGGSRYFLMFTDDYSRFSWVYFLKFKSETFETFKKFKAFVENQSGN 564
Query: 1577 TMKVLRSDRGGEYTSNLFADFCKEQGMQHQLTVSYTPQQNGVSERKNRTIVEMARSMLK 1753
+K LR+DRGGE+ SN F FC+E G++ +LT YTP+QNGV+ERKNRT+VEMARS LK
Sbjct: 565 KIKSLRTDRGGEFLSNDFNLFCEENGIRRELTAPYTPEQNGVAERKNRTVVEMARSSLK 623
>KYP50361.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1310
Score = 464 bits (1194), Expect = e-144
Identities = 255/597 (42%), Positives = 361/597 (60%), Gaps = 18/597 (3%)
Frame = +2
Query: 20 EIVENGYEEPAAGVVLTQAQKDTLKDCRXXXXXXXXXXXXTVDDEVMKKIQHATTAKQAW 199
++VENGYEEP T AQ + LK R VD+ +KI +A ++K+AW
Sbjct: 37 DVVENGYEEPVTTEGYTNAQMNALKVARAKDKAALYLLYRAVDESGFEKIANAKSSKEAW 96
Query: 200 DKLQTSYKGDDKVKNVRLQTARGEFETLHMNNSEKIYDYFSRVQSIVNQLRDNGEVLDDL 379
D L+ + KGD++VK VRLQT RGE E + M SE + ++ +RV+++ N+L NGE L
Sbjct: 97 DILEKAKKGDERVKQVRLQTLRGELENMRMKESEGVSEFITRVETVANKLNRNGENLPSS 156
Query: 380 RIVQKIMRSLPARFDYVVAAIEEGKDLATMTVDGLMSSLCAHEYRMDLRSAAG-SIEQDF 556
R+V+KI+RSL F+ +V AIEE KDL+T+TV+ L SL A+E R + G S+EQ
Sbjct: 157 RVVEKILRSLTDDFENIVCAIEESKDLSTLTVEELTGSLEAYEQRKKNKKEKGESLEQAL 216
Query: 557 QSKVSMTEKG-----NSSGEVEAKASKPKGR------YDKSKVRCYHCKKPGNYRKECKL 703
Q+K ++ E+ N+ G + +GR Y+ ++CY+C G+ K+C+
Sbjct: 217 QAKATIKEEKVLYAQNNRGRGRGRGLGGRGRGGRGNEYECYSIKCYNCGNLGHISKDCR- 275
Query: 704 LHVKFNSEHANIVQDGVEERETLLLACSSYEEEHLDK------WYLDTGCSNHMFGKKDK 865
K E N + + EE E LLL + E E WYLDTG SNHM G +
Sbjct: 276 -SEKKKEEPTNFLAE--EEDEGLLLVTTIPETEIKPSCTDNSVWYLDTGASNHMCGDEHL 332
Query: 866 FFQLDESVRGDVNFGNKTKVPIMGKGNILINLKNGSHEYISDVYYVPSLHWSLLSLGQLC 1045
F L + G V+FG+ +KV + G+G I +NG I DVYYVP L ++LS+GQL
Sbjct: 333 FKMLSKEEVGSVSFGDASKVTVKGRGTIRYQQRNGKIGEIRDVYYVPDLKSNILSMGQLM 392
Query: 1046 EKGLKIVIEDGVCKIENKKKELVAHVKMTKNCMFPLNLQTSSVYNFSASITDKNWLWHLR 1225
EKG ++++D ++++K LVA V+M KN M+ L L+ + D+ WH R
Sbjct: 393 EKGYSVLMKDRELQLKDKLGRLVAQVEMKKNRMYKLELKIVRDECMQLDLEDEAMKWHRR 452
Query: 1226 YGHLNFNDLKLLGQKDMVTGLPRLDCTNRFCKGCVL*KQHRDPFPVGKSRRASQQLELIH 1405
+GHL+F L L +K+MV GLP+++ +FC+ CV+ K R FP RA +QL LIH
Sbjct: 453 FGHLHFRGLTELVKKEMVIGLPKMEFEKKFCEECVIGKHARTSFPRSSEYRAKEQLGLIH 512
Query: 1406 SDICGPIETESSGGNRYFITFIDDYSRKVWVYFLKKKSEALDVFNVFKVFVEKQSGYTMK 1585
+D+CGPI ES G +YF++FIDD+SRK WVYFLK+K E + F FKV VEK++ +K
Sbjct: 513 TDLCGPITPESFSGKKYFLSFIDDFSRKTWVYFLKEKLEVFETFKKFKVMVEKETSKFVK 572
Query: 1586 VLRSDRGGEYTSNLFADFCKEQGMQHQLTVSYTPQQNGVSERKNRTIVEMARSMLKG 1756
+RSDRGGE+TS F +C+E G++ LT Y+PQQNGV+ERKNRTI++M RSMLKG
Sbjct: 573 AVRSDRGGEFTSFEFNKYCEEHGIKRFLTAPYSPQQNGVAERKNRTILDMVRSMLKG 629
>KYP44457.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 690
Score = 446 bits (1148), Expect = e-144
Identities = 242/593 (40%), Positives = 354/593 (59%), Gaps = 17/593 (2%)
Frame = +2
Query: 23 IVENGYEEPAAGVVLTQAQKDTLKDCRXXXXXXXXXXXXTVDDEVMKKIQHATTAKQAWD 202
+VE G+E+ G T+ QK + + +D +++ I T+K+ WD
Sbjct: 40 LVEIGFEDSEKGSAATEDQKKKRDEMKLKDFQVKNYLIQAIDRTILETILKKNTSKEIWD 99
Query: 203 KLQTSYKGDDKVKNVRLQTARGEFETLHMNNSEKIYDYFSRVQSIVNQLRDNGEVLDDLR 382
++ Y+G+ +VK + LQ R EFE L M + E I +YFSRV S+ +++R GE + D+
Sbjct: 100 SIKRKYEGNARVKRLILQGLRKEFEILEMKSGESITNYFSRVMSVASKMRTYGEQMQDVI 159
Query: 383 IVQKIMRSLPARFDYVVAAIEEGKDLATMTVDGLMSSLCAHEYRMDLRSAAGSIEQDFQS 562
IV+KI+RSL RF+Y+V +IEE KD+ ++++D L SSL HE + + E++
Sbjct: 160 IVEKILRSLTDRFNYIVCSIEESKDIDSLSIDELQSSLIVHEQKFHKKH-----EEEQAL 214
Query: 563 KVSMTEKGNSSGEVEAK-------ASKPKGRYDKSKVRCYHCKKPGNYRKECK---LLHV 712
KVS E+ ++ G + +GR +++ + C+ C K G+Y+ EC +V
Sbjct: 215 KVSSEERNDNGGRGRGSYRGRGRGRGRGRGRQNRATIECFKCHKLGHYKYECPDWDAYYV 274
Query: 713 KFNSEHANIVQDGVEERETLLLACSSYEEEH----LDKWYLDTGCSNHMFGKKDKFFQLD 880
FN EE E LL+A YE+ H + W+LD+GCSNHM G + F ++D
Sbjct: 275 AFN-----------EEEELLLMA---YEDLHDVQTTNAWFLDSGCSNHMCGNRAWFKEVD 320
Query: 881 ESVRGDVNFGNKTKVPIMGKGNILINLKNGSHEYISDVYYVPSLHWSLLSLGQLCEKGLK 1060
++ + V GN T++ + GKG++ +N+K +H I+DV+ VP L +LLS+GQL EKGL
Sbjct: 321 DTFKQHVKLGNNTRMEVTGKGSVRLNIKGVTH-VITDVFLVPELKNNLLSIGQLQEKGLT 379
Query: 1061 IVIEDGVCKIENKKKELVAHVKMTKNCMFPLNLQTSSVYN--FSASITDKNWLWHLRYGH 1234
++ + G CK+ + K L+ MT N MF L Q+++ + F S D + LWH RY H
Sbjct: 380 VMFQSGTCKLYHPDKGLILETNMTTNIMFILFAQSATKKDSCFHISTQDLSSLWHHRYAH 439
Query: 1235 LNFNDLKLLGQKDMVTGLPR-LDCTNRFCKGCVL*KQHRDPFPVGKSRRASQQLELIHSD 1411
L+ L++L K MV GLP L T C+ C KQHRDP P RA Q+LELIH+D
Sbjct: 440 LSHKGLRILQSKGMVRGLPSSLSTTENVCEDCTKGKQHRDPIPKKSQWRAKQKLELIHAD 499
Query: 1412 ICGPIETESSGGNRYFITFIDDYSRKVWVYFLKKKSEALDVFNVFKVFVEKQSGYTMKVL 1591
ICGPI S+ RYF+ FIDDYSRK W+YFL KKSEA F FK VEK+SG +K L
Sbjct: 500 ICGPITPSSNSQKRYFLCFIDDYSRKTWIYFLTKKSEAFHYFQCFKNLVEKESGLMIKCL 559
Query: 1592 RSDRGGEYTSNLFADFCKEQGMQHQLTVSYTPQQNGVSERKNRTIVEMARSML 1750
+DRGGE+TS F +FC++ G++ QLT++YTPQQNGV+ERKNRTI+ + ++L
Sbjct: 560 ITDRGGEFTSLEFNEFCQKTGIKRQLTIAYTPQQNGVAERKNRTIMNLVTTLL 612
>KYP43697.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 871
Score = 451 bits (1160), Expect = e-143
Identities = 239/579 (41%), Positives = 353/579 (60%)
Frame = +2
Query: 20 EIVENGYEEPAAGVVLTQAQKDTLKDCRXXXXXXXXXXXXTVDDEVMKKIQHATTAKQAW 199
+IVE GY EP + AQ L+ R VD+ +KI +A ++K+AW
Sbjct: 12 DIVEKGYREPEEDEDQSVAQIAALEKTRVKDKSALYFLYNAVDESGFEKIANAASSKEAW 71
Query: 200 DKLQTSYKGDDKVKNVRLQTARGEFETLHMNNSEKIYDYFSRVQSIVNQLRDNGEVLDDL 379
L+ +++G+ +V+ +RLQT RGEFE+L M + E++ +Y +RV+ + NQL NGE +
Sbjct: 72 KILEVAHRGNHRVRQIRLQTLRGEFESLKMEDKEQVSEYITRVEKVANQLGRNGEPMPAS 131
Query: 380 RIVQKIMRSLPARFDYVVAAIEEGKDLATMTVDGLMSSLCAHEYRMDLRSAAGSIEQDFQ 559
RIV+KI+RSL F+ + IEE KDL+ ++V+ L SL AHE R R +++Q Q
Sbjct: 132 RIVEKILRSLTDDFESIACVIEESKDLSVLSVEELAGSLEAHEQRR--RKMKNTLDQALQ 189
Query: 560 SKVSMTEKGNSSGEVEAKASKPKGRYDKSKVRCYHCKKPGNYRKECKLLHVKFNSEHANI 739
+++ + E N+ G + +G +S+V CY C K G+Y KEC+ + +N E +
Sbjct: 190 AQLDLNETRNTQGR--RSGGQGRGSQPRSEVECYKCGKLGHYAKECRSANC-YNYEKSEA 246
Query: 740 VQDGVEERETLLLACSSYEEEHLDKWYLDTGCSNHMFGKKDKFFQLDESVRGDVNFGNKT 919
D L+C + WYLDTG SNHM G++ F +L + G V+FG+ +
Sbjct: 247 ELD---------LSCLNNSV-----WYLDTGASNHMCGEESFFNELIKVKAGFVSFGDDS 292
Query: 920 KVPIMGKGNILINLKNGSHEYISDVYYVPSLHWSLLSLGQLCEKGLKIVIEDGVCKIENK 1099
KV + G+G I K+G I +VYYVP L ++LS+GQ+ EKG ++++D V +++K
Sbjct: 293 KVAVKGRGTIKFMQKDGRVGEIRNVYYVPELKNNILSMGQMMEKGNSVLMKDRVLYLKDK 352
Query: 1100 KKELVAHVKMTKNCMFPLNLQTSSVYNFSASITDKNWLWHLRYGHLNFNDLKLLGQKDMV 1279
L+A V+M KN M+ L L + D+ +WH R+GHLNF L L +K++V
Sbjct: 353 HDRLIARVEMKKNRMYKLELNILQNKCLKLDVKDEAMMWHFRFGHLNFGGLAELSRKELV 412
Query: 1280 TGLPRLDCTNRFCKGCVL*KQHRDPFPVGKSRRASQQLELIHSDICGPIETESSGGNRYF 1459
GL ++ +FC+ CVL K R FP +A +QL LIH+D+CGPI S G +YF
Sbjct: 413 LGLRGVEFDKKFCEACVLGKHTRTSFPSSSEHKAKEQLGLIHTDLCGPISPASFSGKKYF 472
Query: 1460 ITFIDDYSRKVWVYFLKKKSEALDVFNVFKVFVEKQSGYTMKVLRSDRGGEYTSNLFADF 1639
I+FIDD+SRK WVYFL++KS+A + F FKV VEK++ +K LRSDRGGE+TS F ++
Sbjct: 473 ISFIDDFSRKTWVYFLQEKSKAFEAFKKFKVMVEKETNKQIKALRSDRGGEFTSAEFMEY 532
Query: 1640 CKEQGMQHQLTVSYTPQQNGVSERKNRTIVEMARSMLKG 1756
C+EQG++ LT Y+PQQNGV+ERKNRTI++M R+MLKG
Sbjct: 533 CEEQGIKRLLTAPYSPQQNGVAERKNRTILDMVRTMLKG 571
>KYP68042.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 999
Score = 453 bits (1165), Expect = e-143
Identities = 245/599 (40%), Positives = 361/599 (60%), Gaps = 23/599 (3%)
Frame = +2
Query: 26 VENGYEEPAAGVVLTQAQKDTLKDCRXXXXXXXXXXXXTVDDEVMKKIQHATTAKQAWDK 205
VE GYE G T+AQK ++ +VD ++++ A T+K+AW
Sbjct: 40 VEQGYEH--VGSSGTEAQKAAYRENEKKDCKALFILHQSVDAANVERLSKAETSKEAWAI 97
Query: 206 LQTSYKGDDKVKNVRLQTARGEFETLHMNNSEKIYDYFSRVQSIVNQLRDNGEVLDDLRI 385
L+ + G K K V+LQT R ++E L M N+E + +Y +RVQ+IVN +R E L +L++
Sbjct: 98 LEKVHGGATKTKKVKLQTLRRQYELLSMENNETVVEYITRVQTIVNTMRGLREKLVELQV 157
Query: 386 VQKIMRSLPARFDYVVAAIEEGKDLATMTVDGLMSSLCAHEYRMDLRSAAGSIEQDFQSK 565
++K++R+LPA+FD++V AIEE K+L ++++ L SL +HE RM R EQ Q++
Sbjct: 158 IEKVLRTLPAKFDHIVVAIEESKNLEELSLEELQGSLESHEQRMIERGEERKAEQALQAQ 217
Query: 566 -----VSMTEKGNSS------GEVEAKA----------SKPKGR-YDKSKVRCYHCKKPG 679
VS +K N G++E K + KGR D V+CY+C K G
Sbjct: 218 SNPKDVSKKKKKNKDRPRQDLGKIEGKEVQDTRKNVDHQQKKGRNVDIRNVKCYNCNKLG 277
Query: 680 NYRKECKLLHVKFNSEHANIVQDGVEERETLLLACSSYEEEHLDK-WYLDTGCSNHMFGK 856
+Y K C+ + + + ++ + + LL+ ++ +E D WYLDTGCS HM G+
Sbjct: 278 HYAKSCQYPNPRRDEARLAREEEDDDSEQVLLMVTTTQKEGGGDNCWYLDTGCSTHMTGR 337
Query: 857 KDKFFQLDESVRGDVNFGNKTKVPIMGKGNILINLKNGSHEYISDVYYVPSLHWSLLSLG 1036
KD F LDES++ V F + + G G ILI KN S +I+DV +VP + +LLSLG
Sbjct: 338 KDWFVNLDESIKSKVKFADDRVMIAEGVGKILIRRKNDSRAFITDVLFVPGMKSNLLSLG 397
Query: 1037 QLCEKGLKIVIEDGVCKIENKKKELVAHVKMTKNCMFPLNLQTSSVYNFSASITDKNWLW 1216
QL EKG +ED + I + + L+ +TKN MF +++ F+A+I + WLW
Sbjct: 398 QLLEKGYVSKLEDKMLTIYDSQHRLLLKSPLTKNRMFKVDIDILDHECFAAAINKEEWLW 457
Query: 1217 HLRYGHLNFNDLKLLGQKDMVTGLPRLDCTNRFCKGCVL*KQHRDPFPVGKSRRASQQLE 1396
H R+GHLNF DL L K +V GLP ++ + CK C+ KQ R+ F S ++ ++LE
Sbjct: 458 HYRFGHLNFKDLHTLKSKSLVKGLPHINQPSEVCKECLECKQSRNSFKQHVSIKSKEKLE 517
Query: 1397 LIHSDICGPIETESSGGNRYFITFIDDYSRKVWVYFLKKKSEALDVFNVFKVFVEKQSGY 1576
+++SD+C PI+TES GGNRYF++FIDD+SRK+W+Y +K+KSE L+VF FKV VE+ SG
Sbjct: 518 VVYSDVCDPIQTESLGGNRYFVSFIDDFSRKLWIYLIKRKSEVLEVFEKFKVLVERNSGQ 577
Query: 1577 TMKVLRSDRGGEYTSNLFADFCKEQGMQHQLTVSYTPQQNGVSERKNRTIVEMARSMLK 1753
+KVLR+D GGEY S F FC ++G++H++ YTPQ NG +ERKNRTI+ M RSMLK
Sbjct: 578 LIKVLRTDGGGEYMSREFQKFCDQEGIEHEVIPPYTPQHNGTAERKNRTIMNMVRSMLK 636
>KYP35753.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1318
Score = 461 bits (1185), Expect = e-143
Identities = 255/605 (42%), Positives = 360/605 (59%), Gaps = 26/605 (4%)
Frame = +2
Query: 20 EIVENGYEEPAAGVVLTQAQKDTLKDCRXXXXXXXXXXXXTVDDEVMKKIQHATTAKQAW 199
++VENGYEEP T AQ + LK R VD+ +KI +A ++K+AW
Sbjct: 37 DVVENGYEEPVTTEGYTNAQLNALKVARAKDKATLYLLYRAVDESSFEKIANAKSSKEAW 96
Query: 200 DKLQTSYKGDDKVKNVRLQTARGEFETLHMNNSEKIYDYFSRVQSIVNQLRDNGEVLDDL 379
D L+ + KGD++VK VRLQT RGE E + M SE + ++ +RV+++ N+L NGE L
Sbjct: 97 DILEKAKKGDERVKQVRLQTLRGELENMRMKESEGVSEFITRVETVANKLNRNGENLPSS 156
Query: 380 RIVQKIMRSLPARFDYVVAAIEEGKDLATMTVDGLMSSLCAHEYRMDLRSAAG-SIEQDF 556
R+V+KI+RSL F+ +V AIEE KDL+T+TV+ L SL A+E R + G S+EQ
Sbjct: 157 RVVEKILRSLTDDFENIVCAIEESKDLSTLTVEELTGSLEAYEQRKKNKKEKGESLEQAL 216
Query: 557 QSKVSMTEKG-----NSSGEVEAKASKPKGR------YDKSKVRCYHCKKPGNYRKECKL 703
Q+K ++ E+ N+ G + +GR Y+ ++CY+C G+ K+C+
Sbjct: 217 QAKATIKEEKVLYAQNNRGRGRGRGLGGRGRGGRGNEYECYSIKCYNCGNLGHISKDCR- 275
Query: 704 LHVKFNSEHANIVQDGVEERETLLLACSSYEEEHLDK--------------WYLDTGCSN 841
K E N + + EE E LLL + E E WYLDTG SN
Sbjct: 276 -SEKKKEEPTNFLAE--EEDEGLLLVTTIPETEIKPSCSSEIKPSCTDNSVWYLDTGASN 332
Query: 842 HMFGKKDKFFQLDESVRGDVNFGNKTKVPIMGKGNILINLKNGSHEYISDVYYVPSLHWS 1021
HM G + F L + G V+FG+ +KV + G+G I +NG I DVYYVP L +
Sbjct: 333 HMCGDEHLFKMLSKEEVGSVSFGDASKVTVKGRGTIRYQQRNGKIGEIRDVYYVPDLRSN 392
Query: 1022 LLSLGQLCEKGLKIVIEDGVCKIENKKKELVAHVKMTKNCMFPLNLQTSSVYNFSASITD 1201
+LS+GQL EKG ++++D ++++K LVA V+M KN M+ L L+ + D
Sbjct: 393 ILSMGQLMEKGYSVLMKDRELQLKDKLGRLVAQVEMKKNRMYKLELKIVRDECMQLDLED 452
Query: 1202 KNWLWHLRYGHLNFNDLKLLGQKDMVTGLPRLDCTNRFCKGCVL*KQHRDPFPVGKSRRA 1381
+ WH R+GHL+F L L +K+MV GLP+++ +FC+ CV+ K R FP RA
Sbjct: 453 EAMKWHRRFGHLHFRGLTELVKKEMVIGLPKMEFEKKFCEECVIGKHARTSFPRSSEYRA 512
Query: 1382 SQQLELIHSDICGPIETESSGGNRYFITFIDDYSRKVWVYFLKKKSEALDVFNVFKVFVE 1561
+QL LIH+D+CGPI ES G +YF++FIDD+SRK WVYFLK+K E + F FKV VE
Sbjct: 513 KEQLGLIHTDLCGPITPESFSGKKYFLSFIDDFSRKTWVYFLKEKLEVFETFKKFKVMVE 572
Query: 1562 KQSGYTMKVLRSDRGGEYTSNLFADFCKEQGMQHQLTVSYTPQQNGVSERKNRTIVEMAR 1741
K+ +K +RSDRGGE+TS F +C+E G++ LT Y+PQQNGV+ERKNRTI++M R
Sbjct: 573 KEMSTFVKAVRSDRGGEFTSVEFNKYCEEHGIKRFLTAPYSPQQNGVAERKNRTILDMVR 632
Query: 1742 SMLKG 1756
SMLKG
Sbjct: 633 SMLKG 637
>KYP48915.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan] KYP63061.1 Retrovirus-related Pol polyprotein from
transposon TNT 1-94 [Cajanus cajan]
Length = 883
Score = 449 bits (1155), Expect = e-143
Identities = 245/591 (41%), Positives = 356/591 (60%), Gaps = 12/591 (2%)
Frame = +2
Query: 20 EIVENGYEEPAAGVVLTQAQKDTLKDCRXXXXXXXXXXXXTVDDEVMKKIQHATTAKQAW 199
+IVE G++EP + AQ TL+ R VD+ +KI +A ++K+AW
Sbjct: 12 DIVEKGFQEPEEDEDQSVAQIATLEKTRVKDKSALYFLYNAVDESGFEKIANAASSKEAW 71
Query: 200 DKLQTSYKGDDKVKNVRLQTARGEFETLHMNNSEKIYDYFSRVQSIVNQLRDNGEVLDDL 379
L+ +++G+ +V+ +RLQT RGEFE+L M + E++ +Y +RV+ + NQL NGE +
Sbjct: 72 KILEVAHRGNHRVRQIRLQTLRGEFESLKMEDKEQVSEYITRVEKVANQLGRNGEPMPAS 131
Query: 380 RIVQKIMRSLPARFDYVVAAIEEGKDLATMTVDGLMSSLCAHEYRMDLRSAAGSIEQDFQ 559
RIV+KI+RSL F+ + IEE KDL+ ++V+ L SL AHE R R +++Q Q
Sbjct: 132 RIVEKILRSLTDDFESIACVIEESKDLSVLSVEELAGSLEAHEQRR--RKMKNTLDQALQ 189
Query: 560 SKVSMTEKGNSSGEVEA------KASKPKGRYD------KSKVRCYHCKKPGNYRKECKL 703
+++ + E N+ G + KGR D +S+V CY C K G+Y KEC+
Sbjct: 190 AQLDLNETRNTQGRRSGGQGRGDHGGRGKGRGDHGGSQPRSEVECYKCGKLGHYAKECR- 248
Query: 704 LHVKFNSEHANIVQDGVEERETLLLACSSYEEEHLDKWYLDTGCSNHMFGKKDKFFQLDE 883
AN G E E L +C + WYLDTG SNHM G++ F +L +
Sbjct: 249 --------SANCYNCGKYEAE-LDSSCLNNSI-----WYLDTGASNHMCGEESFFNELIK 294
Query: 884 SVRGDVNFGNKTKVPIMGKGNILINLKNGSHEYISDVYYVPSLHWSLLSLGQLCEKGLKI 1063
G V+FG+ +KV + G+G I K+G I +VYYVP L ++LS+GQ+ EKG +
Sbjct: 295 VKAGFVSFGDDSKVAVKGRGTIKFMQKDGRVGEIRNVYYVPELKNNILSMGQMMEKGNSV 354
Query: 1064 VIEDGVCKIENKKKELVAHVKMTKNCMFPLNLQTSSVYNFSASITDKNWLWHLRYGHLNF 1243
+++D V +++K L+A V+M KN M+ L L + D+ +WH R+GHLNF
Sbjct: 355 LMKDRVLYLKDKHDRLIARVEMKKNRMYKLELNILQNKCLKLDVKDEAMMWHFRFGHLNF 414
Query: 1244 NDLKLLGQKDMVTGLPRLDCTNRFCKGCVL*KQHRDPFPVGKSRRASQQLELIHSDICGP 1423
L L +K++V GL ++ +FC+ CVL K R FP +A +QL LIH+D+CGP
Sbjct: 415 GGLAELSRKELVLGLRGVEFDKKFCEACVLGKHTRTSFPSSSEHKAKEQLGLIHTDLCGP 474
Query: 1424 IETESSGGNRYFITFIDDYSRKVWVYFLKKKSEALDVFNVFKVFVEKQSGYTMKVLRSDR 1603
I S G +YFI+FIDD+SRK WVYFL++KS+A + F FKV VEK++ +K LRSDR
Sbjct: 475 ISPASFSGKKYFISFIDDFSRKTWVYFLQEKSKAFEAFKKFKVMVEKETNKQIKALRSDR 534
Query: 1604 GGEYTSNLFADFCKEQGMQHQLTVSYTPQQNGVSERKNRTIVEMARSMLKG 1756
GGE+TS F ++C+EQG++ LT Y+PQQNGV+ERKNRTI+EM R+MLKG
Sbjct: 535 GGEFTSAEFMEYCEEQGIKRLLTAPYSPQQNGVAERKNRTILEMVRTMLKG 585