BLASTX nr result

ID: Papaver32_contig00032033 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver32_contig00032033
         (517 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_010252356.1 PREDICTED: probable mediator of RNA polymerase II...    92   5e-19
XP_018816387.1 PREDICTED: probable mediator of RNA polymerase II...    90   3e-18
XP_018824946.1 PREDICTED: probable mediator of RNA polymerase II...    89   5e-18
CDP19914.1 unnamed protein product [Coffea canephora]                  87   4e-17
JAU32138.1 putative mediator of RNA polymerase II transcription ...    82   6e-17
OAY33267.1 hypothetical protein MANES_13G082000 [Manihot esculenta]    86   7e-17
KYP67820.1 hypothetical protein KK1_024173 [Cajanus cajan]             86   9e-17
KDO53373.1 hypothetical protein CISIN_1g018587mg [Citrus sinensis]     84   2e-16
XP_006427871.1 hypothetical protein CICLE_v10025964mg [Citrus cl...    83   2e-16
KJB67900.1 hypothetical protein B456_010G216800 [Gossypium raimo...    84   3e-16
KJB67899.1 hypothetical protein B456_010G216800 [Gossypium raimo...    84   3e-16
XP_017643572.1 PREDICTED: probable mediator of RNA polymerase II...    84   3e-16
XP_016754190.1 PREDICTED: probable mediator of RNA polymerase II...    84   3e-16
XP_016714778.1 PREDICTED: probable mediator of RNA polymerase II...    84   3e-16
XP_012451443.1 PREDICTED: probable mediator of RNA polymerase II...    84   3e-16
KHG16250.1 Transcription elongation factor A N-terminal and cent...    84   3e-16
OMO73441.1 hypothetical protein CCACVL1_17263 [Corchorus capsula...    84   3e-16
XP_018445200.1 PREDICTED: probable mediator of RNA polymerase II...    84   3e-16
OMO85762.1 hypothetical protein COLO4_21459 [Corchorus olitorius]      84   3e-16
KDO53372.1 hypothetical protein CISIN_1g018587mg [Citrus sinensis]     84   3e-16

>XP_010252356.1 PREDICTED: probable mediator of RNA polymerase II transcription
           subunit 26c [Nelumbo nucifera]
          Length = 349

 Score = 92.0 bits (227), Expect = 5e-19
 Identities = 41/59 (69%), Positives = 51/59 (86%)
 Frame = -3

Query: 227 MDLDEFRMILRKSGVDVWNFIDTAISVASLDYRDELKERRDGIVEKLYLPSNLSCRNCD 51
           M+ D+FR ILR SGVDVW FIDTAISVASLDY++ELK+RRDGI+E+LY+P    C+NC+
Sbjct: 1   MNFDDFRSILRNSGVDVWTFIDTAISVASLDYKNELKDRRDGIIERLYVPFVSGCQNCN 59


>XP_018816387.1 PREDICTED: probable mediator of RNA polymerase II transcription
           subunit 26c [Juglans regia]
          Length = 348

 Score = 89.7 bits (221), Expect = 3e-18
 Identities = 44/66 (66%), Positives = 49/66 (74%), Gaps = 3/66 (4%)
 Frame = -3

Query: 227 MDLDEFRMILRKSGVDVWNFIDTAISVASLDYRDELKERRDGIVEKLYL---PSNLSCRN 57
           MDLD+FR +L   GVDVW FIDTAI+VAS DY DELK RRDGIVE+LY    P    CRN
Sbjct: 4   MDLDDFREVLESCGVDVWTFIDTAITVASSDYGDELKHRRDGIVERLYAATSPGQPRCRN 63

Query: 56  CDNNDN 39
           CD+ DN
Sbjct: 64  CDDVDN 69


>XP_018824946.1 PREDICTED: probable mediator of RNA polymerase II transcription
           subunit 26c [Juglans regia] XP_018824947.1 PREDICTED:
           probable mediator of RNA polymerase II transcription
           subunit 26c [Juglans regia]
          Length = 350

 Score = 89.4 bits (220), Expect = 5e-18
 Identities = 44/66 (66%), Positives = 50/66 (75%), Gaps = 3/66 (4%)
 Frame = -3

Query: 227 MDLDEFRMILRKSGVDVWNFIDTAISVASLDYRDELKERRDGIVEKLYL---PSNLSCRN 57
           MDLD+FR +L   GVDVW FIDTAI+VASLDY  ELK RRDGIVE+LY    P+   CRN
Sbjct: 2   MDLDDFRAVLDSCGVDVWTFIDTAIAVASLDYGGELKHRRDGIVERLYAATSPAQPRCRN 61

Query: 56  CDNNDN 39
           CD+ DN
Sbjct: 62  CDDLDN 67


>CDP19914.1 unnamed protein product [Coffea canephora]
          Length = 365

 Score = 87.0 bits (214), Expect = 4e-17
 Identities = 42/64 (65%), Positives = 51/64 (79%), Gaps = 2/64 (3%)
 Frame = -3

Query: 227 MDLDEFRMILRKSGVDVWNFIDTAISVASLDYRDELKERRDGIVEKLYLPSNLS--CRNC 54
           MDLDEFR+IL KS VDVW+ I+ AI+VA +DY +ELK+RRD IVEKLY PS+    CRNC
Sbjct: 1   MDLDEFRVILSKSKVDVWSLIEAAITVAGIDYSEELKDRRDKIVEKLYFPSSSGQVCRNC 60

Query: 53  DNND 42
            +ND
Sbjct: 61  HSND 64


>JAU32138.1 putative mediator of RNA polymerase II transcription subunit 26c,
           partial [Noccaea caerulescens] JAU53991.1 putative
           mediator of RNA polymerase II transcription subunit 26c,
           partial [Noccaea caerulescens]
          Length = 144

 Score = 82.4 bits (202), Expect = 6e-17
 Identities = 41/60 (68%), Positives = 46/60 (76%), Gaps = 1/60 (1%)
 Frame = -3

Query: 227 MDLDEFRMILRKSGVDVWNFIDTAISVASLDYRDELKERRDGIVEKLYLPSNLS-CRNCD 51
           MDLD+FR I+  +GVDVW FIDTAI VASLDY  ELK RRD IVE+LY  S  + CRNCD
Sbjct: 1   MDLDDFRSIMDNAGVDVWTFIDTAILVASLDYGQELKRRRDNIVERLYATSMANKCRNCD 60


>OAY33267.1 hypothetical protein MANES_13G082000 [Manihot esculenta]
          Length = 352

 Score = 86.3 bits (212), Expect = 7e-17
 Identities = 43/71 (60%), Positives = 53/71 (74%), Gaps = 1/71 (1%)
 Frame = -3

Query: 230 KMDLDEFRMILRKSGVDVWNFIDTAISVASLDYRDELKERRDGIVEKLYLPSNLS-CRNC 54
           +MD+D+FR IL  SGVDVW FIDTAI VAS D+ DELK+RRD IVE LY  S+   CRNC
Sbjct: 2   RMDIDDFRSILESSGVDVWTFIDTAILVASSDFGDELKQRRDKIVEMLYASSSSGRCRNC 61

Query: 53  DNNDNEVLHRH 21
           D + + + +RH
Sbjct: 62  DFDMDGISNRH 72


>KYP67820.1 hypothetical protein KK1_024173 [Cajanus cajan]
          Length = 313

 Score = 85.5 bits (210), Expect = 9e-17
 Identities = 41/72 (56%), Positives = 54/72 (75%), Gaps = 2/72 (2%)
 Frame = -3

Query: 227 MDLDEFRMILRKSGVDVWNFIDTAISVASLDYRDELKERRDGIVEKLYLPSNL--SCRNC 54
           MD ++FR IL  +G DVW  IDTAI+VAS+D+ DELK RRDGIVE+LY+ S+    CRNC
Sbjct: 1   MDSEDFRSILESAGADVWTLIDTAIAVASVDHGDELKRRRDGIVERLYVASSAPPRCRNC 60

Query: 53  DNNDNEVLHRHS 18
           + +D E+  R+S
Sbjct: 61  EPDDGEIKTRNS 72


>KDO53373.1 hypothetical protein CISIN_1g018587mg [Citrus sinensis]
          Length = 286

 Score = 84.3 bits (207), Expect = 2e-16
 Identities = 43/60 (71%), Positives = 47/60 (78%), Gaps = 1/60 (1%)
 Frame = -3

Query: 227 MDLDEFRMILRKSGVDVWNFIDTAISVASLDYRDELKERRDGIVEKLYLPSNLS-CRNCD 51
           MDLD+FR IL+ +GVDVW FIDTAI VASLDY  ELKERRD IVE+LY     S CRNCD
Sbjct: 1   MDLDDFRSILKTAGVDVWTFIDTAILVASLDYATELKERRDKIVERLYATCIASRCRNCD 60


>XP_006427871.1 hypothetical protein CICLE_v10025964mg [Citrus clementina]
           ESR41111.1 hypothetical protein CICLE_v10025964mg
           [Citrus clementina]
          Length = 218

 Score = 82.8 bits (203), Expect = 2e-16
 Identities = 42/60 (70%), Positives = 47/60 (78%), Gaps = 1/60 (1%)
 Frame = -3

Query: 227 MDLDEFRMILRKSGVDVWNFIDTAISVASLDYRDELKERRDGIVEKLYLPSNLS-CRNCD 51
           MDL++FR IL+ +GVDVW FIDTAI VASLDY  ELKERRD IVE+LY     S CRNCD
Sbjct: 1   MDLEDFRSILKTAGVDVWTFIDTAILVASLDYATELKERRDKIVERLYATCIASRCRNCD 60


>KJB67900.1 hypothetical protein B456_010G216800 [Gossypium raimondii]
          Length = 327

 Score = 84.3 bits (207), Expect = 3e-16
 Identities = 43/76 (56%), Positives = 56/76 (73%), Gaps = 4/76 (5%)
 Frame = -3

Query: 227 MDLDEFRMILRKSGVDVWNFIDTAISVASLDYRDELKERRDGIVEKLYLPSNLS-CRNCD 51
           MDLD+FR +L  +GVDVW FIDTAI VASLDY  ELK+RRDGIVE+LY  S ++ C++CD
Sbjct: 1   MDLDDFRSVLETAGVDVWTFIDTAILVASLDYGQELKQRRDGIVERLYATSMVTKCKSCD 60

Query: 50  ---NNDNEVLHRHSSP 12
               ++   L+  S+P
Sbjct: 61  FGEGSNGYQLNNESNP 76


>KJB67899.1 hypothetical protein B456_010G216800 [Gossypium raimondii]
          Length = 332

 Score = 84.3 bits (207), Expect = 3e-16
 Identities = 43/76 (56%), Positives = 56/76 (73%), Gaps = 4/76 (5%)
 Frame = -3

Query: 227 MDLDEFRMILRKSGVDVWNFIDTAISVASLDYRDELKERRDGIVEKLYLPSNLS-CRNCD 51
           MDLD+FR +L  +GVDVW FIDTAI VASLDY  ELK+RRDGIVE+LY  S ++ C++CD
Sbjct: 1   MDLDDFRSVLETAGVDVWTFIDTAILVASLDYGQELKQRRDGIVERLYATSMVTKCKSCD 60

Query: 50  ---NNDNEVLHRHSSP 12
               ++   L+  S+P
Sbjct: 61  FGEGSNGYQLNNESNP 76


>XP_017643572.1 PREDICTED: probable mediator of RNA polymerase II transcription
           subunit 26c [Gossypium arboreum]
          Length = 335

 Score = 84.3 bits (207), Expect = 3e-16
 Identities = 43/76 (56%), Positives = 56/76 (73%), Gaps = 4/76 (5%)
 Frame = -3

Query: 227 MDLDEFRMILRKSGVDVWNFIDTAISVASLDYRDELKERRDGIVEKLYLPSNLS-CRNCD 51
           MDLD+FR +L  +GVDVW FIDTAI VASLDY  ELK+RRDGIVE+LY  S ++ C++CD
Sbjct: 1   MDLDDFRSVLETAGVDVWTFIDTAILVASLDYGQELKQRRDGIVERLYATSMVTKCKSCD 60

Query: 50  ---NNDNEVLHRHSSP 12
               ++   L+  S+P
Sbjct: 61  FGEGSNGYQLNNESNP 76


>XP_016754190.1 PREDICTED: probable mediator of RNA polymerase II transcription
           subunit 26c [Gossypium hirsutum]
          Length = 335

 Score = 84.3 bits (207), Expect = 3e-16
 Identities = 43/76 (56%), Positives = 56/76 (73%), Gaps = 4/76 (5%)
 Frame = -3

Query: 227 MDLDEFRMILRKSGVDVWNFIDTAISVASLDYRDELKERRDGIVEKLYLPSNLS-CRNCD 51
           MDLD+FR +L  +GVDVW FIDTAI VASLDY  ELK+RRDGIVE+LY  S ++ C++CD
Sbjct: 1   MDLDDFRSVLETAGVDVWTFIDTAILVASLDYGQELKQRRDGIVERLYATSMVTKCKSCD 60

Query: 50  ---NNDNEVLHRHSSP 12
               ++   L+  S+P
Sbjct: 61  FGEGSNGYQLNNESNP 76


>XP_016714778.1 PREDICTED: probable mediator of RNA polymerase II transcription
           subunit 26c [Gossypium hirsutum]
          Length = 335

 Score = 84.3 bits (207), Expect = 3e-16
 Identities = 43/76 (56%), Positives = 56/76 (73%), Gaps = 4/76 (5%)
 Frame = -3

Query: 227 MDLDEFRMILRKSGVDVWNFIDTAISVASLDYRDELKERRDGIVEKLYLPSNLS-CRNCD 51
           MDLD+FR +L  +GVDVW FIDTAI VASLDY  ELK+RRDGIVE+LY  S ++ C++CD
Sbjct: 1   MDLDDFRSVLETAGVDVWTFIDTAILVASLDYGQELKQRRDGIVERLYATSMVTKCKSCD 60

Query: 50  ---NNDNEVLHRHSSP 12
               ++   L+  S+P
Sbjct: 61  FGEGSNGYQLNNESNP 76


>XP_012451443.1 PREDICTED: probable mediator of RNA polymerase II transcription
           subunit 26c [Gossypium raimondii] KJB67898.1
           hypothetical protein B456_010G216800 [Gossypium
           raimondii]
          Length = 335

 Score = 84.3 bits (207), Expect = 3e-16
 Identities = 43/76 (56%), Positives = 56/76 (73%), Gaps = 4/76 (5%)
 Frame = -3

Query: 227 MDLDEFRMILRKSGVDVWNFIDTAISVASLDYRDELKERRDGIVEKLYLPSNLS-CRNCD 51
           MDLD+FR +L  +GVDVW FIDTAI VASLDY  ELK+RRDGIVE+LY  S ++ C++CD
Sbjct: 1   MDLDDFRSVLETAGVDVWTFIDTAILVASLDYGQELKQRRDGIVERLYATSMVTKCKSCD 60

Query: 50  ---NNDNEVLHRHSSP 12
               ++   L+  S+P
Sbjct: 61  FGEGSNGYQLNNESNP 76


>KHG16250.1 Transcription elongation factor A N-terminal and central
           domain-containing 2 [Gossypium arboreum]
          Length = 335

 Score = 84.3 bits (207), Expect = 3e-16
 Identities = 43/76 (56%), Positives = 56/76 (73%), Gaps = 4/76 (5%)
 Frame = -3

Query: 227 MDLDEFRMILRKSGVDVWNFIDTAISVASLDYRDELKERRDGIVEKLYLPSNLS-CRNCD 51
           MDLD+FR +L  +GVDVW FIDTAI VASLDY  ELK+RRDGIVE+LY  S ++ C++CD
Sbjct: 1   MDLDDFRSVLETAGVDVWTFIDTAILVASLDYGQELKQRRDGIVERLYATSMVTKCKSCD 60

Query: 50  ---NNDNEVLHRHSSP 12
               ++   L+  S+P
Sbjct: 61  FGEGSNGYQLNNESNP 76


>OMO73441.1 hypothetical protein CCACVL1_17263 [Corchorus capsularis]
          Length = 336

 Score = 84.3 bits (207), Expect = 3e-16
 Identities = 42/76 (55%), Positives = 55/76 (72%), Gaps = 4/76 (5%)
 Frame = -3

Query: 227 MDLDEFRMILRKSGVDVWNFIDTAISVASLDYRDELKERRDGIVEKLYLPSNLS-CRNCD 51
           MDLD+FR +L  +GVDVW FIDTAI VASLDY  ELK+RRDGIVE+LY  S ++ C+ CD
Sbjct: 1   MDLDDFRSVLETAGVDVWTFIDTAILVASLDYGQELKQRRDGIVERLYATSMVTRCKGCD 60

Query: 50  ---NNDNEVLHRHSSP 12
               ++   +++  SP
Sbjct: 61  FGERSNGHQINKEGSP 76


>XP_018445200.1 PREDICTED: probable mediator of RNA polymerase II transcription
           subunit 26c [Raphanus sativus]
          Length = 336

 Score = 84.3 bits (207), Expect = 3e-16
 Identities = 42/60 (70%), Positives = 47/60 (78%), Gaps = 1/60 (1%)
 Frame = -3

Query: 227 MDLDEFRMILRKSGVDVWNFIDTAISVASLDYRDELKERRDGIVEKLYLPSNLS-CRNCD 51
           MDLDEFR I+  +GVDVW FIDTAI VASLDY  ELK+RRD IVE+LY  S  + CRNCD
Sbjct: 1   MDLDEFRSIMDNAGVDVWTFIDTAILVASLDYGQELKQRRDNIVERLYATSMANKCRNCD 60


>OMO85762.1 hypothetical protein COLO4_21459 [Corchorus olitorius]
          Length = 338

 Score = 84.3 bits (207), Expect = 3e-16
 Identities = 42/76 (55%), Positives = 55/76 (72%), Gaps = 4/76 (5%)
 Frame = -3

Query: 227 MDLDEFRMILRKSGVDVWNFIDTAISVASLDYRDELKERRDGIVEKLYLPSNLS-CRNCD 51
           MDLD+FR +L  +GVDVW FIDTAI VASLDY  ELK+RRDGIVE+LY  S ++ C+ CD
Sbjct: 1   MDLDDFRSVLETAGVDVWTFIDTAILVASLDYGQELKQRRDGIVERLYATSMVTRCKGCD 60

Query: 50  ---NNDNEVLHRHSSP 12
               ++   +++  SP
Sbjct: 61  FGERSNGHQINKEGSP 76


>KDO53372.1 hypothetical protein CISIN_1g018587mg [Citrus sinensis]
          Length = 353

 Score = 84.3 bits (207), Expect = 3e-16
 Identities = 43/60 (71%), Positives = 47/60 (78%), Gaps = 1/60 (1%)
 Frame = -3

Query: 227 MDLDEFRMILRKSGVDVWNFIDTAISVASLDYRDELKERRDGIVEKLYLPSNLS-CRNCD 51
           MDLD+FR IL+ +GVDVW FIDTAI VASLDY  ELKERRD IVE+LY     S CRNCD
Sbjct: 1   MDLDDFRSILKTAGVDVWTFIDTAILVASLDYATELKERRDKIVERLYATCIASRCRNCD 60


Top